BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126794.6 - phase: 0
(926 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50920 ATP-dependent Clp protease, ATP-binding subunit 1533 0.0
At3g48870 AtClpC 1463 0.0
At5g51070 Erd1 protein precursor (sp|P42762) 748 0.0
At5g15450 clpB heat shock protein-like 705 0.0
At2g25140 putative ATP-dependent CLPB protein 698 0.0
At1g74310 heat shock protein 101 660 0.0
At4g14670 heat shock protein like 503 e-142
At3g45450 clpC-like protein 365 e-101
At2g25030 putative ATP-dependent CLPB protein 188 1e-47
At2g25040 hypothetical protein 91 3e-18
At4g30350 unknown protein 74 4e-13
At5g57710 101 kDa heat shock protein; HSP101-like protein 70 5e-12
At4g12060 unknown protein 64 4e-10
At4g25370 unknown protein 62 1e-09
At1g07200 unknown protein 62 2e-09
At2g40130 unknown protein 57 6e-08
At2g29970 unknown protein 56 8e-08
At1g64110 unknown protein 50 8e-06
At3g01610 putative cell division control protein 44 5e-04
At3g53350 unknown protein 43 7e-04
>At5g50920 ATP-dependent Clp protease, ATP-binding subunit
Length = 929
Score = 1533 bits (3968), Expect = 0.0
Identities = 804/930 (86%), Positives = 856/930 (91%), Gaps = 11/930 (1%)
Query: 2 SRALAQSINVPGLVAGRRHVNNNKGAARSRRSVRMMFTTRTASP-RLSSYSGLRTLNSLD 60
+R LAQS P L +R+V + +G+ RSRRSV+MM + S R+ + GLR N+LD
Sbjct: 5 TRVLAQS-TPPSLACYQRNVPS-RGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALD 62
Query: 61 SMLRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGHN 120
++ + QDFHSKV + + G+ SR KAMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 63 TLGKSRQDFHSKVRQAMNVPK---GKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHN 119
Query: 121 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR 180
FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR
Sbjct: 120 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR 179
Query: 181 VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEGA 240
VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP+NIRTQVIRMVGE
Sbjct: 180 VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEN- 238
Query: 241 DSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNP 300
+ V A VG GSS+NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGRRTKNNP
Sbjct: 239 NEVTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 298
Query: 301 CLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 360
CLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL
Sbjct: 299 CLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 358
Query: 361 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI 420
MEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI
Sbjct: 359 MEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI 418
Query: 421 EKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISD 480
EKDPALERRFQPVKVPEPTV ETIQILKGLRERYEIHHKLRYTDE+LVAAA+LS+QYISD
Sbjct: 419 EKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISD 478
Query: 481 RFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELRD 540
RFLPDKAIDLIDEAGSRVRL+HAQ+PEEAR LEKE+RQI KEK+EAVR Q+FEKAG LRD
Sbjct: 479 RFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRD 538
Query: 541 KEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVDESDR 600
+E++L+ ++SA+ K KEM+KAESE G+ G +VTE DIQHIV+SWTGIPV+KVS DESDR
Sbjct: 539 REIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDR 598
Query: 601 LLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 660
LLKME+TLHKRIIGQ EAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL
Sbjct: 599 LLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 658
Query: 661 ASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 720
A+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE
Sbjct: 659 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 718
Query: 721 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 780
IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY
Sbjct: 719 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 778
Query: 781 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLK 840
DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKEVFERLK
Sbjct: 779 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLK 838
Query: 841 TKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 900
KEIEL VTERF+ERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD
Sbjct: 839 KKEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 898
Query: 901 ADSDGNVIVLNGSTGAP----DSLPDALPV 926
D++GNV VLNG +G P + D+LPV
Sbjct: 899 VDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 928
>At3g48870 AtClpC
Length = 952
Score = 1463 bits (3788), Expect = 0.0
Identities = 763/903 (84%), Positives = 826/903 (90%), Gaps = 11/903 (1%)
Query: 31 RRSVRMMFTTRTASPRLSSYSGLRTLNSLDSMLRPGQDFHSKVLTQIGTNRAKGGRGSRC 90
R V+MM + + + S+SGLR ++LD + RP F K + R K SRC
Sbjct: 53 RGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKA---SRC 109
Query: 91 VTKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 150
V KAMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL
Sbjct: 110 VPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 169
Query: 151 KDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG 210
KD+RVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG
Sbjct: 170 KDSRVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG 229
Query: 211 EGVAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSS-NNKMPTLEEYGTNLTKL 269
EGVAARVLENLGADP+NIRTQVIRMVGE + V A+VG GSS N+KMPTLEEYGTNLTKL
Sbjct: 230 EGVAARVLENLGADPSNIRTQVIRMVGEN-NEVTASVGGGSSGNSKMPTLEEYGTNLTKL 288
Query: 270 AEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 329
AEEGKLDPVVGRQPQIER+ QIL RRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPET
Sbjct: 289 AEEGKLDPVVGRQPQIERMVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPET 348
Query: 330 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 389
IEGK VITLDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGA
Sbjct: 349 IEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGA 408
Query: 390 IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKG 449
IDAANILKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEPTV E IQIL+G
Sbjct: 409 IDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQG 468
Query: 450 LRERYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEA 509
LRERYEIHHKLRYTDEALVAAA+LSHQYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEA
Sbjct: 469 LRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 528
Query: 510 RGLEKEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDV 569
R LEK++RQI KEK+EAVR+Q+FE AG RD+E++LK +I+ ++ + KE+ KAE+EA +
Sbjct: 529 RELEKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEG 588
Query: 570 GALVTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRA 629
G VTE DIQHIVA+WTGIPV+KVS DES RLL+ME TLH R+IGQ EAV+AISRAIRRA
Sbjct: 589 GPTVTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRA 648
Query: 630 RVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLI 689
RVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLI
Sbjct: 649 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 708
Query: 690 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 749
GSPPGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV
Sbjct: 709 GSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 768
Query: 750 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 809
DFKNTLLIMTSNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNR
Sbjct: 769 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNR 828
Query: 810 LDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARP 869
LDEMIVFRQLTKLEVKEIADIMLKEV RL+ KEIEL VTERF+ERVVDEG++PSYGARP
Sbjct: 829 LDEMIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARP 888
Query: 870 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTG------APDSLPDA 923
LRRAIMRLLEDSMAEKML+R+IKEGDSVIVD D++G+V+VL+G+TG A +++ D
Sbjct: 889 LRRAIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDP 948
Query: 924 LPV 926
+P+
Sbjct: 949 IPI 951
>At5g51070 Erd1 protein precursor (sp|P42762)
Length = 945
Score = 748 bits (1930), Expect = 0.0
Identities = 413/849 (48%), Positives = 560/849 (65%), Gaps = 38/849 (4%)
Query: 94 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGE--------GTGIAA-KVLK 144
A+FERFTE+AI+ I+ +Q+EA+ LG + V T+ +LLGLI E G+GI K +
Sbjct: 78 AVFERFTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDRDPQGFLGSGITIDKARE 137
Query: 145 SMGINLKDARVEVEKIIGRGSGFV-AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLL 203
++ +A + ++ + + + ++PF+ KRV E ++E +R + YI EH+
Sbjct: 138 AVWSIWDEANSDSKQEEASSTSYSKSTDMPFSISTKRVFEAAVEYSRTMDCQYIAPEHIA 197
Query: 204 LGLLREGEGVAARVLENLGADPTNIRTQVI-RMVGEGADS----------------VGAT 246
+GL +G A RVL+ LGA+ + + R+ GE A G
Sbjct: 198 VGLFTVDDGSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREPSSSSKGSFESPPSGRI 257
Query: 247 VGSGSSNNKMPT-LEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGE 305
GSG K LE++ +LT A EG +DPV+GR+ +++RV QIL RRTKNNP L+GE
Sbjct: 258 AGSGPGGKKAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGE 317
Query: 306 PGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 365
GVGKTAIAEGLA IA P + K++++LD+GLL+AG K RGE E R+ L+ E+K
Sbjct: 318 AGVGKTAIAEGLAISIAEASAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISEVK 377
Query: 366 QSDEIILFIDEVHTLIGAGAAE-----GAIDAANILKPALARGELQCIGATTLDEYRKHI 420
+S ++ILFIDEVHTLIG+G +D AN+LKP+L RGELQCI +TTLDE+R
Sbjct: 378 KSGKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFRSQF 437
Query: 421 EKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISD 480
EKD AL RRFQPV + EP+ + ++IL GLRE+YE HH +YT EA+ AA LS +YI+D
Sbjct: 438 EKDKALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIAD 497
Query: 481 RFLPDKAIDLIDEAGSRVRLQHAQLPEEARG--LEKEVRQIVKEKDEAVRNQEFEKAGEL 538
RFLPDKAIDLIDEAGSR R++ + +E L K +E E +
Sbjct: 498 RFLPDKAIDLIDEAGSRARIEAFRKKKEDAICILSKPPNDYWQEIKTVQAMHEVVLSSRQ 557
Query: 539 RDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVDES 598
+ + D + S + + + A + D LV DI + + W+GIPV +++ DE
Sbjct: 558 KQDDGDAISDESGELVEESSLPPAAGD--DEPILVGPDDIAAVASVWSGIPVQQITADER 615
Query: 599 DRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 658
L+ +ED L R++GQ EAV AISRA++R+RVGLK+P+RPIA+ +F GPTGVGK+EL K
Sbjct: 616 MLLMSLEDQLRGRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTK 675
Query: 659 ALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 718
ALA+ YFGSEE+M+RLDMSE+MERHTVSKLIGSPPGYVG+ EGG LTEA+RRRP+TVVLF
Sbjct: 676 ALAANYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLF 735
Query: 719 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR-RIGFD 777
DEIEKAHPD+FN++LQ+ EDG LTDS+GR V FKN L+IMTSNVGS I KG IGF
Sbjct: 736 DEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSLAIAKGRHGSIGFI 795
Query: 778 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFE 837
LD DE+ +SY +K+LV EELK YFRPE LNR+DE+++FRQL K ++ EI ++ML+++
Sbjct: 796 LDDDEEAASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKS 855
Query: 838 RLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 897
RL + L V+E +E + +GY+P+YGARPLRR + ++ED ++E LA K GD+
Sbjct: 856 RLVALGVGLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTA 915
Query: 898 IVDADSDGN 906
V D GN
Sbjct: 916 FVVLDDTGN 924
>At5g15450 clpB heat shock protein-like
Length = 968
Score = 705 bits (1819), Expect = 0.0
Identities = 390/873 (44%), Positives = 550/873 (62%), Gaps = 86/873 (9%)
Query: 97 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVE 156
+ FTE A + I+ + + A+ V TE ++ L+ + G+A ++ +G++
Sbjct: 80 QEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNGLARRIFSKIGVDNTKVLEA 139
Query: 157 VEKIIGRGS---GFVAVEIPFTPRAKRVLELSLEEARQ----LGHNYIGSEHLLLGLLRE 209
EK I R G A + R LE + ARQ L +Y+ EHL+L +
Sbjct: 140 TEKFIQRQPKVYGDAAGSM-----LGRDLEALFQRARQFKKDLKDSYVSVEHLVLAFA-D 193
Query: 210 GEGVAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKL 269
+ ++ ++ ++++ + + G+ +V K LE+YG +LT +
Sbjct: 194 DKRFGKQLFKDFQISERSLKSAIESIRGK------QSVIDQDPEGKYEALEKYGKDLTAM 247
Query: 270 AEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 329
A EGKLDPV+GR +I R QIL RRTKNNP LIGEPGVGKTAI+EGLAQRI GDVP+
Sbjct: 248 AREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQA 307
Query: 330 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGAGAAEG 388
+ +K+I+LDMG L+AG KYRGEFE+RLK +++E+ S+ +IILFIDE+HT++GAGA G
Sbjct: 308 LMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGATNG 367
Query: 389 AIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILK 448
A+DA N+LKP L RGEL+CIGATTLDEYRK+IEKDPALERRFQ V V +PTV +TI IL+
Sbjct: 368 AMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILR 427
Query: 449 GLRERYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEE 508
GLRERYE+HH +R +D ALV AA LS +YIS RFLPDKAIDL+DEA ++++++ P
Sbjct: 428 GLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTA 487
Query: 509 ARGLEKEVRQIVKEK-------DEAVR--------------------------------- 528
L++ V ++ E+ D+A R
Sbjct: 488 LDELDRSVIKLEMERLSLTNDTDKASRERLNRIETELVLLKEKQAELTEQWEHERSVMSR 547
Query: 529 -----------NQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGAL----- 572
N E ++A D + + +L +++N+AE E + +
Sbjct: 548 LQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLNEAEKELNEYLSSGKSMF 607
Query: 573 ---VTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRA 629
V DI IV+ WTGIPV K+ E D+LL +E+ LHKR++GQ+ AV A++ AI+R+
Sbjct: 608 REEVLGSDIAEIVSKWTGIPVSKLQQSERDKLLHLEEELHKRVVGQNPAVTAVAEAIQRS 667
Query: 630 RVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLI 689
R GL +P RPIASF+F GPTGVGK+ELAKALASY F +EEA++R+DMSE+ME+H VS+LI
Sbjct: 668 RAGLSDPGRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLI 727
Query: 690 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 749
G+PPGYVGY EGGQLTE VRRRPY+V+LFDEIEKAH DVFN+ LQIL+DGR+TDS+GRTV
Sbjct: 728 GAPPGYVGYEEGGQLTETVRRRPYSVILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRTV 787
Query: 750 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 809
F NT++IMTSNVGS I + D D + SY IK V + FRPEF+NR
Sbjct: 788 SFTNTVIIMTSNVGSQFILN-------NTDDDANELSYETIKERVMNAARSIFRPEFMNR 840
Query: 810 LDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARP 869
+DE IVF+ L + ++ I + L V +R+ +++++++T+ + + GY+P+YGARP
Sbjct: 841 VDEYIVFKPLDREQINRIVRLQLARVQKRIADRKMKINITDAAVDLLGSLGYDPNYGARP 900
Query: 870 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDAD 902
++R I + +E+ +A+ +L + KE D +++D +
Sbjct: 901 VKRVIQQNIENELAKGILRGDFKEEDGILIDTE 933
>At2g25140 putative ATP-dependent CLPB protein
Length = 964
Score = 698 bits (1802), Expect = 0.0
Identities = 411/954 (43%), Positives = 590/954 (61%), Gaps = 93/954 (9%)
Query: 33 SVRMMFTTRTASPRLSSYSGLRTLNSLDSMLRPGQDFHSKV----LTQIGTNRAK----G 84
+++ +T SP L S S L + S+ RP F K+ +T T +
Sbjct: 13 AIKAQYTLSRPSPLLRSRS-LSSSPHYTSIGRPTNSFIGKINNSSITHATTTHGQLFPLS 71
Query: 85 GRGSRCVTKAMFER--FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKV 142
C T A + FTE A + ++ A + AR V +E ++ L+ + G+A K+
Sbjct: 72 SPRRFCTTTAQVNQNEFTEMAWEGLINAFDAARESKQQIVESEHLMKALLEQKDGMARKI 131
Query: 143 LKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQ----LGHNYIG 198
GI+ + I + V R L + LE A++ + +Y+
Sbjct: 132 FTKAGIDNSSVLQATDLFISKQP---TVSDASGQRLGSSLSVILENAKRHKKDMLDSYVS 188
Query: 199 SEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPT 258
EH LL + ++ D ++ + + G+ V + +K
Sbjct: 189 VEHFLLAYYSDTR-FGQEFFRDMKLDIQVLKDAIKDVRGD------QRVTDRNPESKYQA 241
Query: 259 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLA 318
LE+YG +LT++A GKLDPV+GR +I R QIL RRTKNNP +IGEPGVGKTAIAEGLA
Sbjct: 242 LEKYGNDLTEMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGLA 301
Query: 319 QRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEV 377
QRI GDVPE + +K+I+LDMG L+AG K+RG+FEERLK +M+E+ S+ + ILFIDE+
Sbjct: 302 QRIVRGDVPEPLMNRKLISLDMGSLLAGAKFRGDFEERLKAVMKEVSASNGQTILFIDEI 361
Query: 378 HTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 437
HT++GAGA +GA+DA+N+LKP L RGEL+CIGATTL EYRK+IEKDPALERRFQ V +
Sbjct: 362 HTVVGAGAMDGAMDASNLLKPMLGRGELRCIGATTLTEYRKYIEKDPALERRFQQVLCVQ 421
Query: 438 PTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSR 497
P+V +TI IL+GLRERYE+HH + +D ALV+AA L+ +YI++RFLPDKAIDL+DEAG++
Sbjct: 422 PSVEDTISILRGLRERYELHHGVTISDSALVSAAVLADRYITERFLPDKAIDLVDEAGAK 481
Query: 498 VRLQHAQLPEEARGLEKEVRQIVKEK-------DEAVRN--QEFE--------KAGELR- 539
++++ P E G+++ V ++ EK D+A + Q+ E K EL
Sbjct: 482 LKMEITSKPTELDGIDRAVIKLEMEKLSLKNDTDKASKERLQKIENDLSTLKQKQKELNV 541
Query: 540 --DKEMDLKTQISALIEK----NKEMNKAESE-----AGDV--GAL-------------- 572
+KE L T+I + E+ N E+ AE E A ++ G L
Sbjct: 542 QWEKEKSLMTKIRSFKEEIDRVNLEIESAEREYDLNRAAELKYGTLLSLQRQLEEAEKNL 601
Query: 573 --------------VTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEA 618
VT++DI IV+ WTGIP+ + E ++L+ +E+ LH R+IGQ A
Sbjct: 602 TNFRQFGQSLLREVVTDLDIAEIVSKWTGIPLSNLQQSEREKLVMLEEVLHHRVIGQDMA 661
Query: 619 VEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSE 678
V++++ AIRR+R GL +PNRPIASF+F GPTGVGK+ELAKALA Y F +E A++R+DMSE
Sbjct: 662 VKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGYLFNTENAIVRVDMSE 721
Query: 679 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 738
+ME+H+VS+L+G+PPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAHPDVFN++LQ+L+D
Sbjct: 722 YMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHPDVFNILLQLLDD 781
Query: 739 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 798
GR+TDS+GRTV FKN ++IMTSN+GS I + R + D K++ Y +K V E
Sbjct: 782 GRITDSQGRTVSFKNCVVIMTSNIGSHHILETLRN-----NEDSKEAVYEIMKRQVVELA 836
Query: 799 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVD 858
+Q FRPEF+NR+DE IVF+ L E+ +I ++ ++ V L+ K+I+L T+ + +
Sbjct: 837 RQNFRPEFMNRIDEYIVFQPLDSNEISKIVELQMRRVKNSLEQKKIKLQYTKEAVDLLAQ 896
Query: 859 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDAD---SDGNVIV 909
G++P+YGARP++R I +++E+ +A +L + E D+V+VD D SD +++
Sbjct: 897 LGFDPNYGARPVKRVIQQMVENEIAVGILKGDFAEEDTVLVDVDHLASDNKLVI 950
>At1g74310 heat shock protein 101
Length = 911
Score = 660 bits (1702), Expect = 0.0
Identities = 373/886 (42%), Positives = 552/886 (62%), Gaps = 85/886 (9%)
Query: 97 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVE 156
E+FT K + I A E A GH + LI + TGI + + S G ++A
Sbjct: 4 EKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGG--ENAAQS 61
Query: 157 VEKIIGRGSGFVAVE------IPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG 210
E++I + + + IP + +V+ + + G ++ + L++GLL +
Sbjct: 62 AERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLEDS 121
Query: 211 EGVAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLA 270
+ +L +G ++++V ++ G+ G V S S + L+ YG +L + A
Sbjct: 122 Q--IRDLLNEVGVATARVKSEVEKLRGKE----GKKVESASGDTNFQALKTYGRDLVEQA 175
Query: 271 EEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETI 330
GKLDPV+GR +I RV +IL RRTKNNP LIGEPGVGKTA+ EGLAQRI GDVP ++
Sbjct: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSL 233
Query: 331 EGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGAGAAEGA 389
++I+LDMG LVAG KYRGEFEERLK +++E++ ++ ++ILFIDE+H ++GAG EG+
Sbjct: 234 TDVRLISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGS 293
Query: 390 IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKG 449
+DAAN+ KP LARG+L+CIGATTL+EYRK++EKD A ERRFQ V V EP+VP+TI IL+G
Sbjct: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRG 353
Query: 450 LRERYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEA 509
L+E+YE HH +R D AL+ AA+LS +YI+ R LPDKAIDL+DEA + VR+Q PEE
Sbjct: 354 LKEKYEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
Query: 510 RGLEK-------EVRQIVKEKDEAVRNQEFEKAGELRD-------------KEMDLKTQI 549
LE+ E+ + +EKD+A + + E EL D KE + +I
Sbjct: 414 DNLERKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEI 473
Query: 550 SALIEKNKEM-------------------------------NKAESEAGDVGALVTE--- 575
L +K +E+ + E + + ++TE
Sbjct: 474 RRLKQKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVG 533
Query: 576 -VDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLK 634
I +V+ WTGIPV ++ +E +RL+ + D LHKR++GQ++AV A+S AI R+R GL
Sbjct: 534 PEHIAEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLG 593
Query: 635 NPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 694
P +P SF+F GPTGVGK+ELAKALA F E ++R+DMSE+ME+H+VS+LIG+PPG
Sbjct: 594 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 653
Query: 695 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 754
YVG+ EGGQLTEAVRRRPY V+LFDE+EKAH VFN +LQ+L+DGRLTD +GRTVDF+N+
Sbjct: 654 YVGHEEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNS 713
Query: 755 LLIMTSNVGSSVIEKG-GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 813
++IMTSN+G+ + G ++ ++ D V E++++FRPE LNRLDE+
Sbjct: 714 VIIMTSNLGAEHLLAGLTGKVTMEVARD-----------CVMREVRKHFRPELLNRLDEI 762
Query: 814 IVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRA 873
+VF L+ +++++A + +K+V RL + + L+VT+ + ++ E Y+P YGARP+RR
Sbjct: 763 VVFDPLSHDQLRKVARLQMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRW 822
Query: 874 IMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTGAPDS 919
+ + + +++ ++ EI E +V +DA + G+++ S G D+
Sbjct: 823 MEKKVVTELSKMVVREEIDENSTVYIDAGA-GDLVYRVESGGLVDA 867
>At4g14670 heat shock protein like
Length = 668
Score = 503 bits (1296), Expect = e-142
Identities = 298/706 (42%), Positives = 420/706 (59%), Gaps = 102/706 (14%)
Query: 98 RFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEV 157
+F ++ A+ A L H V + + LI + T + + + S G D +
Sbjct: 5 KFDPNVKLILASARSHAMSLSHGQVTPLHLGVTLISDLTSVFYRAITSAG----DGDISA 60
Query: 158 EKIIGRGSGFVAVEIPFTPRAKRVLELSLEEA--RQLGHNYIGSEHLLLGLLREGEGVAA 215
+ ++ V+ SL + R LG +G L++ LL + + +
Sbjct: 61 QSVVN------------------VINQSLYKLTKRNLGDTKVGVAVLVISLLEDSQ--IS 100
Query: 216 RVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKL 275
VL+ G P ++++V ++ GE + L+ YGT+L + A GKL
Sbjct: 101 DVLKEAGVVPEKVKSEVEKLRGEVI---------------LRALKTYGTDLVEQA--GKL 143
Query: 276 DPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKV 335
DPV+GR +I RV ++L RRTKNNP LIGEPGVGKTA+ EGLAQRI GDVP + G K+
Sbjct: 144 DPVIGRHREIRRVIEVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPINLTGVKL 203
Query: 336 ITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGAGAAEGAIDAAN 394
I+L+ G +VAGT RG+FEERLK +++ ++++ +++LFIDE+H +GA A G+ DAA
Sbjct: 204 ISLEFGAMVAGTTLRGQFEERLKSVLKAVEEAQGKVVLFIDEIHMALGACKASGSTDAAK 263
Query: 395 ILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERY 454
+LKP LARG+L+ IGATTL+EYR H+EKD A ERRFQ V V EP+VP+TI IL+GL+E+Y
Sbjct: 264 LLKPMLARGQLRFIGATTLEEYRTHVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKY 323
Query: 455 EIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEK 514
E HH +R D ALV +A+LS +YI+ R LPDKAIDL+DE+ + V+ Q PEE LE+
Sbjct: 324 EGHHGVRIQDRALVLSAQLSERYITGRRLPDKAIDLVDESCAHVKAQLDIQPEEIDSLER 383
Query: 515 EVRQIVKEKDEAVRNQEFEKAGELRDKEM-----DLKTQISALIEKNKEMNKAESEA--- 566
+V Q+ E A+ ++ +KA E R E+ DL+ ++ L K K+ K +E
Sbjct: 384 KVMQLEIE-IHALEKEKDDKASEARLSEVRKELDDLRDKLEPLTIKYKKEKKIINETRRL 442
Query: 567 ----GDVGALVTEVDIQH------------------------------------------ 580
D+ + E + QH
Sbjct: 443 KQNRDDLMIALQEAERQHDVPKAAVLKYGAIQEVESAIAKLEKSAKDNVMLTETVGPENI 502
Query: 581 --IVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNR 638
+V+ WTGIPV ++ +E RL+ + D LH+R++GQ EAV+A++ AI R+RVGL P +
Sbjct: 503 AEVVSRWTGIPVTRLDQNEKKRLISLADKLHERVVGQDEAVKAVAAAILRSRVGLGRPQQ 562
Query: 639 PIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG-YVG 697
P SF+F GPTGVGK+ELAKALA F SE ++RLDMSE+ ++ +V+KLIG+PPG Y+G
Sbjct: 563 PSGSFLFLGPTGVGKTELAKALAEQLFDSENLLVRLDMSEYNDKFSVNKLIGAPPGYYIG 622
Query: 698 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 743
+ EGGQLTE VRRRPY VVLFDE+EK H VFN +LQ+LEDGRLTD
Sbjct: 623 HEEGGQLTEPVRRRPYCVVLFDEVEKTHVTVFNTLLQVLEDGRLTD 668
>At3g45450 clpC-like protein
Length = 341
Score = 365 bits (938), Expect = e-101
Identities = 223/383 (58%), Positives = 249/383 (64%), Gaps = 45/383 (11%)
Query: 95 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 154
MFERFTEKAIKVI LAQEEARRLG+NF GTE ILL LIGEGTGIAAKVLKSMGINLKDAR
Sbjct: 1 MFERFTEKAIKVITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDAR 60
Query: 155 VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 214
VEVEKIIGRGSGFV VEIPFTPR K + H +G+A
Sbjct: 61 VEVEKIIGRGSGFVVVEIPFTPR-KACAGFVTRGSSTTRH----------------KGIA 103
Query: 215 ARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGK 274
RVLE LGADP+NIRTQ V A + S + + E T GK
Sbjct: 104 VRVLEILGADPSNIRTQ-----------VNAPILVNSQQALVAEVMETATWQVGNTRRGK 152
Query: 275 LDPVVGRQPQIERVTQILGRRT-KNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGK 333
LDPVVGRQPQI+RV QIL RRT +NN CLIG+PGVGK AIAEG+AQRIA+GDVPETI+GK
Sbjct: 153 LDPVVGRQPQIKRVVQILARRTCRNNACLIGKPGVGKRAIAEGIAQRIASGDVPETIKGK 212
Query: 334 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 393
+ + G + RG+ E E QSD+IILFIDE+H LIGAGA EGAIDAA
Sbjct: 213 MNVAGNCGWNEIRWRSRGKIE-------EVYGQSDDIILFIDEMHLLIGAGAVEGAIDAA 265
Query: 394 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRER 453
NILKPAL R ELQ YRKHIE DPALERRFQPVKVPEPTV E IQI L +
Sbjct: 266 NILKPALERCELQ---------YRKHIENDPALERRFQPVKVPEPTVEEAIQITTVLAKG 316
Query: 454 YEIHHKLRYTDEALVAAAELSHQ 476
E++ +E E ++
Sbjct: 317 KEVNKADNEAEEGRPTVTEADNE 339
Score = 30.8 bits (68), Expect = 3.7
Identities = 14/30 (46%), Positives = 21/30 (69%)
Query: 548 QISALIEKNKEMNKAESEAGDVGALVTEVD 577
QI+ ++ K KE+NKA++EA + VTE D
Sbjct: 308 QITTVLAKGKEVNKADNEAEEGRPTVTEAD 337
>At2g25030 putative ATP-dependent CLPB protein
Length = 265
Score = 188 bits (478), Expect = 1e-47
Identities = 108/307 (35%), Positives = 174/307 (56%), Gaps = 55/307 (17%)
Query: 604 MEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASY 663
+E LH+RII Q VE+++ AIR ++ G+ +PNR IASF+F G V
Sbjct: 2 LEQILHERIIAQDLDVESVADAIRCSKAGISDPNRLIASFMFMGQPSV------------ 49
Query: 664 YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 723
VS+L+G+ PGYVGY +GG+LTE VRRRPY+VV FDEIEK
Sbjct: 50 ---------------------VSQLVGASPGYVGYGDGGKLTEVVRRRPYSVVQFDEIEK 88
Query: 724 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK 783
H DVF+++LQ+L+DGR+T+S G + L + +N D K
Sbjct: 89 PHLDVFSILLQLLDDGRITNSHGSL----HILETIRNNE------------------DIK 126
Query: 784 DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKE 843
++ Y +K V E ++ FRP+F+NR+DE IV + L E+ +I ++ +++V +RL+ +
Sbjct: 127 EAFYEMMKQQVVELARKTFRPKFMNRIDEYIVSQPLNSSEISKIVELQMRQVKKRLEQNK 186
Query: 844 IELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDADS 903
I L T+ + + G++P+ GARP+++ I +L++ + K+L + E ++++DAD
Sbjct: 187 INLEYTKEAVDLLAQLGFDPNNGARPVKQMIEKLVKKEITLKVLKGDFAEDGTILIDADQ 246
Query: 904 DGNVIVL 910
N +V+
Sbjct: 247 PNNKLVI 253
>At2g25040 hypothetical protein
Length = 135
Score = 90.9 bits (224), Expect = 3e-18
Identities = 42/77 (54%), Positives = 57/77 (73%)
Query: 249 SGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGV 308
+ ++ K LE YG++LTK+A +GKL P++GR ++ R QIL R T++NP +IGEPGV
Sbjct: 59 ANQTDAKHEALETYGSDLTKMARQGKLPPLIGRDDEVNRCIQILCRMTESNPVIIGEPGV 118
Query: 309 GKTAIAEGLAQRIANGD 325
GKTAI EGLA+RI GD
Sbjct: 119 GKTAIVEGLAERIVKGD 135
>At4g30350 unknown protein
Length = 924
Score = 73.9 bits (180), Expect = 4e-13
Identities = 52/171 (30%), Positives = 86/171 (49%), Gaps = 13/171 (7%)
Query: 591 DKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTG 650
D +D +LLK L K + QH+A +++ AI + G ++ +F+GP
Sbjct: 563 DSFDIDLFKKLLK---GLAKSVWWQHDAASSVAAAITECKHG-NGKSKGDIWLMFTGPDR 618
Query: 651 VGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 710
GKS++A AL+ GS+ I L S M+ + G T + EAVRR
Sbjct: 619 AGKSKMASALSDLVSGSQPITISLGSSSRMDDGLNIR---------GKTALDRFAEAVRR 669
Query: 711 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 761
P+ V++ ++I++A + N + +E GR+ DS GR V N ++I+T+N
Sbjct: 670 NPFAVIVLEDIDEADILLRNNVKIAIERGRICDSYGREVSLGNVIIILTAN 720
Score = 37.7 bits (86), Expect = 0.030
Identities = 49/206 (23%), Positives = 92/206 (43%), Gaps = 24/206 (11%)
Query: 236 VGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRR 295
+G G SV A V N P L++ G + + G + + R + +RV +I+ R
Sbjct: 200 IGFGYRSVPAPVNRNLYLN--PRLQQPGVGM----QSGMM---IQRTDEAKRVIEIMIRT 250
Query: 296 TKNNPCLIG--EPGVGKTAIAEGLAQRIANGDVPE-TIEGKKVITLDMGLLVAGTKYRGE 352
K NP L+G EP + + + + ++I NG+ + + +VI L+ L+ GE
Sbjct: 251 RKRNPVLVGDSEPHI----LVKEILEKIENGEFSDGALRNFQVIRLEKELVSQLATRLGE 306
Query: 353 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG--AIDAANILKPALARGELQCIGA 410
+ L+E ++L + ++ L+ AA G ++ +L+ +G L IG
Sbjct: 307 ----ISGLVETRIGGGGVVLDLGDLKWLVEHPAANGGAVVEMRKLLE--RYKGRLCFIGT 360
Query: 411 TTLDEYRKHIEKDPALERRFQPVKVP 436
T + Y + P++E + +P
Sbjct: 361 ATCETYLRCQVYYPSMENDWDLQAIP 386
>At5g57710 101 kDa heat shock protein; HSP101-like protein
Length = 990
Score = 70.1 bits (170), Expect = 5e-12
Identities = 46/176 (26%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 591 DKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIAS-----FIF 645
+ + +D +LLK + +++ Q++A A++ + + ++G R + S +F
Sbjct: 602 NSLDIDLFKKLLK---GMTEKVWWQNDAAAAVAATVSQCKLG-NGKRRGVLSKGDVWLLF 657
Query: 646 SGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 705
SGP VGK ++ AL+S +G+ MI+L + S + G T ++
Sbjct: 658 SGPDRVGKRKMVSALSSLVYGTNPIMIQLGSRQDAGDGNSS--------FRGKTALDKIA 709
Query: 706 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 761
E V+R P++V+L ++I++A V + Q ++ GR+ DS GR + N + +MT++
Sbjct: 710 ETVKRSPFSVILLEDIDEADMLVRGSIKQAMDRGRIRDSHGREISLGNVIFVMTAS 765
Score = 37.4 bits (85), Expect = 0.039
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 279 VGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPE-TIEGKKVIT 337
V + +ERV ILGR K NP L+G+ G+ + + ++I G+V ++ KV++
Sbjct: 213 VSKNDDVERVMDILGRAKKKNPVLVGDSEPGR--VIREILKKIEVGEVGNLAVKNSKVVS 270
Query: 338 LD 339
L+
Sbjct: 271 LE 272
>At4g12060 unknown protein
Length = 241
Score = 63.9 bits (154), Expect = 4e-10
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 38 FTTRTA--SPRLSSYSGLRTLNSLDSMLRPGQD--FHSKVLTQIGTNRAKGGRGSRCVTK 93
F+TR A +P L +L S S L+ + H ++ + T V+
Sbjct: 34 FSTRKALTNPWLGVVDSSLSLTSPVSALQTNRPRRIHKSAISSLPT-----ANPDLVVSD 88
Query: 94 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDA 153
A +++ +AIK + + EAR+L + GTE +L+G++ EGT +K L++ I L
Sbjct: 89 AKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKIMLYKV 148
Query: 154 RVEVEKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGLLREG 210
R E K++G+ F P T A+R L+ +L++ + G + H+LLG+ E
Sbjct: 149 REETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPAHILLGIWSEV 208
Query: 211 EGVAARVLENLG 222
E ++L LG
Sbjct: 209 ESPGHKILATLG 220
>At4g25370 unknown protein
Length = 238
Score = 62.4 bits (150), Expect = 1e-09
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Query: 98 RFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEV 157
+++ +AIK + + + EAR+L + GTE IL+G++ EGT AK L+ G+ L R E
Sbjct: 85 KWSARAIKSLAMGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRGNGVTLFKVRDET 144
Query: 158 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLG-HNYIGSEHLLLGLLREGEGVA 214
++G+ F P T A++ + +++E + + + +LLLG+ + +
Sbjct: 145 LSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNKSDVDGELTTAYLLLGVWSQKDSAG 204
Query: 215 ARVLENLGADPTNIRTQVIRMVGEGAD 241
++LE LG + + +V + + E D
Sbjct: 205 RQILEKLGFNEDKAK-EVEKSMNEDVD 230
>At1g07200 unknown protein
Length = 979
Score = 61.6 bits (148), Expect = 2e-09
Identities = 42/161 (26%), Positives = 79/161 (48%), Gaps = 11/161 (6%)
Query: 604 MEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFI-FSGPTGVGKSELAKALAS 662
+ + L +++ Q EAV AIS+ I + N+ ++ GP VGK ++A L+
Sbjct: 621 LREILSRKVAWQTEAVNAISQIICGCKTDSTRRNQASGIWLALLGPDKVGKKKVAMTLSE 680
Query: 663 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 722
+FG + I +D ++ + G T +T + R+P++VVL + +E
Sbjct: 681 VFFGGKVNYICVDFG--------AEHCSLDDKFRGKTVVDYVTGELSRKPHSVVLLENVE 732
Query: 723 KAH-PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 762
KA PD + + + G++ D GR + KN ++++TS +
Sbjct: 733 KAEFPDQMRLS-EAVSTGKIRDLHGRVISMKNVIVVVTSGI 772
Score = 33.5 bits (75), Expect = 0.57
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Query: 287 RVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD---MGLL 343
R+ ++LGR+ K NP LIG G + I G +I+++ +L
Sbjct: 225 RIGEVLGRKDKKNPLLIGNCANEALKTFTDSINSGKLGFLQMDISGLSLISIEKEISEIL 284
Query: 344 VAGTKYRGEFEERLKKLMEEIKQSDE---IILFIDEVHTLIGAGAAEGAI---DAANILK 397
G+K E ++ L ++QS I+L + E+ L A I +++LK
Sbjct: 285 ADGSKNEEEIRMKVDDLGRTVEQSGSKSGIVLNLGELKVLTSEANAALEILVSKLSDLLK 344
Query: 398 PALARGELQCIGATTLDE-YRKHIEKDPALER 428
+L IG + +E Y K I++ P +E+
Sbjct: 345 H--ESKQLSFIGCVSSNETYTKLIDRFPTIEK 374
>At2g40130 unknown protein
Length = 907
Score = 56.6 bits (135), Expect = 6e-08
Identities = 44/153 (28%), Positives = 68/153 (43%), Gaps = 12/153 (7%)
Query: 612 IIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAM 671
+ GQ EA IS A+ + K+ R GP VGK ++ LA + SE
Sbjct: 545 VSGQDEAARVISCALSQPP---KSVTRRDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRF 601
Query: 672 IRLDMSEFMERHTVSKLIGS---PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDV 728
+ +D+ + +G P G T + E + R P+ VV + IEKA +
Sbjct: 602 MAVDLG------AAEQGMGGCDDPMRLRGKTMVDHIFEVMCRNPFCVVFLENIEKADEKL 655
Query: 729 FNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 761
+ + +E G+ DS GR V NT+ +MTS+
Sbjct: 656 QMSLSKAIETGKFMDSHGREVGIGNTIFVMTSS 688
>At2g29970 unknown protein
Length = 1002
Score = 56.2 bits (134), Expect = 8e-08
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Query: 549 ISALIEKNKEMNKAESEAGD--VGALVTEVDIQHIVASWTGIPVDKVSVDESD------- 599
+S I K K S + + + T++ + I AS P VSV+ D
Sbjct: 557 LSVKISKPKHTEDLSSSTTNSPLSFVTTDLGLGTIYASKNQEPSTPVSVERRDFEVIKEK 616
Query: 600 RLLK----------MEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIAS-----FI 644
+LL + + L +++ Q+EAV AIS + R + N +A+
Sbjct: 617 QLLSASRYCKDFKSLRELLSRKVGFQNEAVNAISEIVCGYRDESRRRNNHVATTSNVWLA 676
Query: 645 FSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 704
GP GK ++A ALA + G ++ I +D F + ++ + G T +
Sbjct: 677 LLGPDKAGKKKVALALAEVFCGGQDNFICVD---FKSQDSLDDR------FRGKTVVDYI 727
Query: 705 TEAVRRRPYTVVLFDEIEKAH-PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 759
V RR +VV + +EKA PD + + + G+L DS GR + KN +++ T
Sbjct: 728 AGEVARRADSVVFIENVEKAEFPDQIRLS-EAMRTGKLRDSHGREISMKNVIVVAT 782
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 287 RVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMG-LLVA 345
R+ ++L R+ K NP L+G GV R G +P I G V+++ + +LV
Sbjct: 227 RIGEVLARKDKKNPLLVGVCGVEALKTFTDSINRGKFGFLPLEISGLSVVSIKISEVLVD 286
Query: 346 GTKYRGEFEE--RLKKLM----EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 399
G++ +F++ RLK M E+K + +D + + + A++LK
Sbjct: 287 GSRIDIKFDDLGRLKSGMVLNLGELKVLASDVFSVDVIEKFV--------LKLADLLK-- 336
Query: 400 LARGELQCIGATTLDE-YRKHIEKDPALER 428
L R +L IG+ + +E Y K IE+ P +++
Sbjct: 337 LHREKLWFIGSVSSNETYLKLIERFPTIDK 366
>At1g64110 unknown protein
Length = 824
Score = 49.7 bits (117), Expect = 8e-06
Identities = 57/255 (22%), Positives = 109/255 (42%), Gaps = 40/255 (15%)
Query: 300 PC----LIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEE 355
PC L G PG GKT +A+ +A+ G I + M + + K+ GE E+
Sbjct: 549 PCRGILLFGPPGTGKTMLAKAIAKEA----------GASFINVSMSTITS--KWFGEDEK 596
Query: 356 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALAR---------GELQ 406
++ L + I+F+DEV +++G G +A +K GE
Sbjct: 597 NVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERI 656
Query: 407 CIGATTLDEYRKHIEKDPALERRFQ-PVKVPEPTVPETIQILKGLRERYEIHHKLRYTDE 465
+ A T + + D A+ RRF+ + V P V +IL+ L + ++ L Y +
Sbjct: 657 LVLAAT----NRPFDLDEAIIRRFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKEL 712
Query: 466 ALV----AAAELSHQYISDRFLPDKAI---DLIDEAGSRVRLQHAQLPEEARGLEKEV-- 516
A++ ++L + + + P + + + I + + + + + EE G E+ V
Sbjct: 713 AMMTEGYTGSDLKNLCTTAAYRPVRELIQQERIKDTEKKKQREPTKAGEEDEGKEERVIT 772
Query: 517 -RQIVKEKDEAVRNQ 530
R + ++ + +NQ
Sbjct: 773 LRPLNRQDFKEAKNQ 787
Score = 30.8 bits (68), Expect = 3.7
Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 517 RQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEV 576
R+ +K+K + ++E + + + + T +S+ E KE KAE + +
Sbjct: 437 REKLKQKTKEESSKEVKAESIKPETKTESVTTVSSKEEPEKEA-KAEKVTPKAPEVAPDN 495
Query: 577 DIQHIVASWTGIPVDKVSVDESD--RLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLK 634
+ + + IP ++++V D L +++++L E + +RR +
Sbjct: 496 EFEKRIRPEV-IPAEEINVTFKDIGALDEIKESLQ----------ELVMLPLRRPDLFTG 544
Query: 635 NPNRPIASFIFSGPTGVGKSELAKALA----------------SYYFGSEEAMIR 673
+P + GP G GK+ LAKA+A S +FG +E +R
Sbjct: 545 GLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVR 599
>At3g01610 putative cell division control protein
Length = 703
Score = 43.5 bits (101), Expect = 5e-04
Identities = 47/164 (28%), Positives = 66/164 (39%), Gaps = 26/164 (15%)
Query: 302 LIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 361
L G PG GKT IA+ A + I+G +++ KY GE E ++ L
Sbjct: 450 LYGPPGCGKTLIAKAAANEAGANFMH--IKGAELLN----------KYVGESELAIRTLF 497
Query: 362 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALA------RGELQCIGATTLDE 415
+ + ++F DEV L + EGA +L L R + IGAT +
Sbjct: 498 QRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGERRNVYVIGATNRPD 557
Query: 416 YRKHIEKDPALER--RF-QPVKVPEPTVPETIQILKGLRERYEI 456
DPA R RF + VP P E ILK + + I
Sbjct: 558 V-----VDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPI 596
Score = 35.0 bits (79), Expect = 0.20
Identities = 36/176 (20%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 211 EGVAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGS---SNNKMPTLEEYGTNLT 267
+ V + N G + + T R + + S+ G+G K PT +++G +
Sbjct: 66 KNVEVETVSNKGR--SKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFKDFG-GIK 122
Query: 268 KLAEEGKLD---PVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 324
K+ +E +++ P++ +P + +G + + G PG GKT +A +A
Sbjct: 123 KILDELEMNVLFPILNPEP-----FKKIGVKPPSGILFHGPPGCGKTKLANAIANEA--- 174
Query: 325 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL 380
G + +++G G EE +++L + ++ I+FIDE+ +
Sbjct: 175 -------GVPFYKISATEVISGVS--GASEENIRELFSKAYRTAPSIVFIDEIDAI 221
>At3g53350 unknown protein
Length = 396
Score = 43.1 bits (100), Expect = 7e-04
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 21/226 (9%)
Query: 355 ERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD 414
E L+KL +E ++ + L + + + A AI+ LK L E + L+
Sbjct: 127 EELRKLSQERDKTWQSELEAMQRQHGMDSTALSSAINEVQKLKSKLFESESE------LE 180
Query: 415 EYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELS 474
+ + + L R+ + +V ++++ + L+E + + ++ V AAE
Sbjct: 181 QSKYEVRSLEKLVRQLEEERVNSRDSSSSMEV-EELKEAMNLSRQEITQLKSAVEAAETR 239
Query: 475 HQ--YISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQE- 531
+Q YI A + + SR + A+L EE + E+ + KE E V+ E
Sbjct: 240 YQEEYIQSTLQIRSAYEQTEAVKSRYSQREAELTEELNRTKDEIEGLRKELMEKVKEDES 299
Query: 532 -----------FEKAGELRDKEMDLKTQISALIEKNKEMNKAESEA 566
E G L DKEM+L+ SA+ +K + N EA
Sbjct: 300 TGDLKKLESDLMEVRGSLMDKEMELQILRSAMEKKVETANTEAMEA 345
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.316 0.136 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,335,236
Number of Sequences: 26719
Number of extensions: 843248
Number of successful extensions: 3737
Number of sequences better than 10.0: 163
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 3436
Number of HSP's gapped (non-prelim): 349
length of query: 926
length of database: 11,318,596
effective HSP length: 108
effective length of query: 818
effective length of database: 8,432,944
effective search space: 6898148192
effective search space used: 6898148192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Medicago: description of AC126794.6