BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126790.10 + phase: 0
(1621 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g10780 pseudogene 1255 0.0
At2g04670 putative retroelement pol polyprotein 1146 0.0
At3g31970 hypothetical protein 775 0.0
At3g11970 hypothetical protein 729 0.0
At1g36590 hypothetical protein 724 0.0
At4g10580 putative reverse-transcriptase -like protein 718 0.0
At2g14650 putative retroelement pol polyprotein 691 0.0
At4g16910 retrotransposon like protein 685 0.0
At1g35370 hypothetical protein 647 0.0
At2g07660 putative retroelement pol polyprotein 620 e-177
At4g07830 putative reverse transcriptase 537 e-152
At1g36120 putative reverse transcriptase gb|AAD22339.1 525 e-149
At2g06890 putative retroelement integrase 478 e-135
At2g05610 putative retroelement pol polyprotein 476 e-134
At4g03650 putative reverse transcriptase 435 e-122
At2g06470 putative retroelement pol polyprotein 341 2e-93
At4g03840 putative transposon protein 335 2e-91
At3g29480 hypothetical protein 319 9e-87
At3g29490 hypothetical protein 317 4e-86
At4g08100 putative polyprotein 293 7e-79
>At2g10780 pseudogene
Length = 1611
Score = 1255 bits (3248), Expect = 0.0
Identities = 697/1593 (43%), Positives = 961/1593 (59%), Gaps = 101/1593 (6%)
Query: 44 GVNAGRHAFDEELFDVEVPR----RRRGNPVVENA--NLQGLQQVVQQLVEIVAGQQQGN 97
G AG+ + +EE + R R P + ++G+ + L + V
Sbjct: 80 GPEAGKKSINEEAPESSGARDSTDNRNNTPTAQEQWDLMKGMMAQLATLTKAVIADPVVL 139
Query: 98 QTHENLEGQQEVRQVD-QVVVAPTRGIEVTLAEFL-KLKPPTFSGSSVSEDPQRFIDGLE 155
+ + EV +V+ Q RG ++L E + +L F GS+ + L+
Sbjct: 140 KVDNQKDDDSEVVEVNPQPNHGRKRGDYLSLLEHVSRLGTRHFMGSTDPIVADEWRSRLK 199
Query: 156 RLWRALGCSDVRAVELTSYQLEGVAHDWFDTVTHGRQMGSSPMAWKEFSKLFMARFLPQS 215
R +++ C + ++ + LEG AH+W+ TV R G ++ +F F ++ P
Sbjct: 200 RNFKSTRCPEDYQRDIAVHFLEGDAHNWWLTVEKRR--GDEVRSFADFEDEFNKKYFPPE 257
Query: 216 VRDQLAHEFEIFEQTEG-MSVSEYSARFTQLSRYAAYCVTEEM-RIKKFIRGLREYIFRS 273
D+L E + +G +V EY F +L RY + EE ++++FIRGLR I
Sbjct: 258 AWDRL--ECAYLDLVQGNRTVREYDEEFNRLRRYVGRELEEEQAQLRRFIRGLRIEIRNH 315
Query: 274 VVGSNCQTFADVLSLALQIEQRQKDKGGTRQDPRKKQRVEGSHSNYSNRGGGSMFGYQGQ 333
+ + ++++ A IE+ +++ R R+K + + S
Sbjct: 316 CLVRTFNSVSELVERAAMIEEGIEEE---RYLNREKAPIRNNQST--------------- 357
Query: 334 QKSVSQKGGFSGQSSGTVQSHRSGHRGSTGSTFPHRHSSGTTRACSVCGRFHSGTCFNDD 393
K +K F + S T C CG+ HSGTC+
Sbjct: 358 -KPADKKRKFD--------------------KVDNTKSDAKTGECVTCGKNHSGTCWKAI 396
Query: 394 RECFQCGQKGHIKKNCPIPTTQPSSSRASAPVALASSH-SPSAPVRQEGNSFVRGSGASQ 452
C +CG K H ++CP +P S+ + + +++E A Q
Sbjct: 397 GACGRCGSKDHAIQSCP--KMEPGQSKVLGEETRTCFYCGKTGHLKRECPKLTAEKQAGQ 454
Query: 453 HGGRGPGGRGQSQVGRGHA-RVFALTRQDAQASN-AVVTGTLSVCSQDAHVLFDPGATYS 510
RG G + A RV+ L+ + A N +TG +P Y
Sbjct: 455 RDNRGGNGLPPPPKRQAVASRVYELSEEANDAGNFRAITGGFRK---------EPNTDYG 505
Query: 511 FVSLYFAPRLGKSSSFLDETLVVTTPVGNNVLAKSVYYSCDVSIEGKVLPADLVVLNMVD 570
+V G + + V + G +PADL+++ +
Sbjct: 506 ---------------------MVRAAGGQAMYPTGLVRGISVVVNGVNMPADLIIVPLKK 544
Query: 571 FDVILGMDWLSLHHATVDCHNKVVKFKPPGEATFSFQGERSWVPNNLISSLRANKLLSRG 630
DVILGMDWL + A +DCH ++F+ E FQG R+ + +IS+++A ++L +G
Sbjct: 545 HDVILGMDWLGKYKAHIDCHRGRIQFERD-EGMLKFQGIRTTSGSLVISAIQAERMLGKG 603
Query: 631 CQGYLALVRDVQAGEE-KLENVPIVCEFSDVFPEELPGIPPDREIEFSIDLIPGTQPISI 689
C+ YLA + + G +L+++PIV EFSDVF + G+PPDR F+I+L PGT PIS
Sbjct: 604 CEAYLATITTKEVGASAELKDIPIVNEFSDVFAA-VSGVPPDRSDPFTIELEPGTTPISK 662
Query: 690 PPYRMAPAELKELREQLQDLLDKGFIRASTSPWGAPVLFVKKKDGSMRLCVDYRQLNKVT 749
PYRMAPAE+ +L++QL++LLDKGFIR S+SPWGAPVLFVKKKDGS RLC+DYR LNKVT
Sbjct: 663 APYRMAPAEMAKLKKQLEELLDKGFIRPSSSPWGAPVLFVKKKDGSFRLCIDYRGLNKVT 722
Query: 750 IKNKYPLPRIDELFDQLQGAQCFSKIDLRSGYHQLKIKSEDISKTAFRTRYGHYEFLVMS 809
+KNKYPLPRIDEL DQL GAQ FSKIDL SGYHQ+ I+ D+ KTAFRTRY H+EF+VM
Sbjct: 723 VKNKYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAFRTRYDHFEFVVMP 782
Query: 810 FGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILIYSKSREEHEQHLRLVLQTLREKQLY 869
FGLTNAPAAFM +MN VF+ FLD FVI+FI+DIL+YSKS E H++HLR VL+ LRE +L+
Sbjct: 783 FGLTNAPAAFMKMMNGVFRDFLDEFVIIFINDILVYSKSWEAHQEHLRAVLERLREHELF 842
Query: 870 AKFSKCEFWLESVAFLGHIVSKNGISVDPSKVEAVQNWPRPTSVKEIRSFLGLAGYYRRF 929
AK SKC FW SV FLGH++S G+SVDP K+ +++ WPRP + EIRSFLGLAGYYRRF
Sbjct: 843 AKLSKCSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRF 902
Query: 930 VKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLKECLISAPILALPTSGGGYVVYCDAS 989
V F+ +A PLTRLT K F W+D CE+SF +LK L +AP+L LP G Y VY DAS
Sbjct: 903 VMSFASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLTNAPVLVLPEEGEPYTVYTDAS 962
Query: 990 RVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTD 1049
VGLGCVLMQ G VIAYASRQL++HE+NYPTHDLEMAAV+F LKIWR YLYG +IYTD
Sbjct: 963 IVGLGCVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFFLKIWRSYLYGAKVQIYTD 1022
Query: 1050 HKSLKYIFEQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHLTAIK 1109
HKSLKYIF Q +LNLRQRRWMEL+ DY+ I YHPGKAN VADALSR+ A + +
Sbjct: 1023 HKSLKYIFTQPELNLRQRRWMELVADYNLDIAYHPGKANQVADALSRRRSEVEAERSQV- 1081
Query: 1110 RPIVKEFQEIVESGVQFEIDHSRTLLAHMKFRSTLIDDIKQAQSQDSELMKMVDNVRNGK 1169
+V + + + E++ L ++ L+ I+ AQ +D E+ N +
Sbjct: 1082 -DLVNMMGTLHVNALSKEVE---PLGLGAADQADLLSRIRLAQERDEEIKGWAQNNK--- 1134
Query: 1170 VSNFSVDSEGVLWLKSRICVPNVDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEG 1229
+ + + G + + R+CVPN L+ +IL EAH S ++IHPGSNKMY+DL+ +Y W G
Sbjct: 1135 -TEYQTSNNGTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRYYHWVG 1193
Query: 1230 MKRDVANFVSKCLVCQQVKAEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKG-FDS 1288
MK+DVA +V+KC CQ VKAEHQ P+GLLQ + IP+WKW+ I MDFVTGLP K ++
Sbjct: 1194 MKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLPIPEWKWDHITMDFVTGLPTGIKSKHNA 1253
Query: 1289 VWVIIDRLTKSAHFLPVKTTYTASQYAKIYLEEIVSLHGVPISIISDRGAQFTAQFWKSF 1348
VWV++DRLTKSAHF+ + A A+ Y++EIV LHG+P+SI+SDR +FT++FWK+F
Sbjct: 1254 VWVVVDRLTKSAHFMAISDKDGAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKAF 1313
Query: 1349 QAALGTRLNLSTAFHPQTDGQSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAYNNSYQ 1408
Q ALGTR+NLSTA+HPQTD QSERTIQ LEDMLRACVLD GG+W++YL ++EFAYNNS+Q
Sbjct: 1314 QKALGTRVNLSTAYHPQTDEQSERTIQTLEDMLRACVLDWGGNWEKYLRLVEFAYNNSFQ 1373
Query: 1409 SSIQMAPFEALYGRRCRSPIGWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQKSY 1468
+SI M+P+EALYGR CR+P+ W VGE +L GP ++ + +++K ++ +L AQ RQKSY
Sbjct: 1374 ASIGMSPYEALYGRACRTPLCWTPVGERRLFGPTIVDETTERMKFLKIKLKEAQDRQKSY 1433
Query: 1469 SDKRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLALPP 1528
++KRR+ LEF VG+ V+L+ KG RF + KL+PR++GP++++ERVG VAY+L LPP
Sbjct: 1434 ANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIERVGAVAYKLDLPP 1493
Query: 1529 DLSRVHPVFHISMLRKYIYDPSHVISHKDVQLDENLSYTEHPVALVDKGVRRLRSKDIVS 1588
L+ H VFH+S LRK + D + L EN++ PV ++D+ + R K
Sbjct: 1494 KLNAFHNVFHVSQLRKCLSDQEESVEDIPPGLKENMTVEAWPVRIMDRMTKGTRGKARDL 1553
Query: 1589 VKVLWKGPSGEETTWEPEETIRGKYPHLFENQG 1621
+KVLW EE TWE E ++ +P F+ G
Sbjct: 1554 LKVLWNCRGREEYTWETENKMKANFPEWFKEMG 1586
>At2g04670 putative retroelement pol polyprotein
Length = 1411
Score = 1146 bits (2964), Expect = 0.0
Identities = 574/1071 (53%), Positives = 749/1071 (69%), Gaps = 46/1071 (4%)
Query: 551 DVSIEGKVLPADLVVLNMVDFDVILGMDWLSLHHATVDCHNKVVKFKPPGEATFSFQGER 610
D+ I G+ +PADL++ + +DVILGMDWL + +DCH V F+ P E +QG R
Sbjct: 383 DIQIAGESMPADLIISPVELYDVILGMDWLDHYRVHLDCHRGRVSFERP-EGRLVYQGVR 441
Query: 611 SWVPNNLISSLRANKLLSRGCQGYLALVRDVQA-GEEKLENVPIVCEFSDVFPEELPGIP 669
+ +IS+++A K++ +GC+ YL + ++ G+ + ++ ++ EF DVF + L G+P
Sbjct: 442 PTSGSLVISAVQAKKMIEKGCEAYLVTISMPESLGQVAVSDIRVIQEFEDVF-QSLQGLP 500
Query: 670 PDREIEFSIDLIPGTQPISIPPYRMAPAELKELREQLQDLLDKGFIRASTSPWGAPVLFV 729
P R F+I+L PGT P+S PYRMAPAE+ EL++QL+DLL KGFIR STSPWGAPVLFV
Sbjct: 501 PSRSDPFTIELEPGTAPLSKAPYRMAPAEMTELKKQLEDLLGKGFIRPSTSPWGAPVLFV 560
Query: 730 KKKDGSMRLCVDYRQLNKVTIKNKYPLPRIDELFDQLQGAQCFSKIDLRSGYHQLKIKSE 789
KKKDGS RLC+DYR LN VT+KNKYPLPRIDEL DQL+GA CFSKIDL SGYHQ+ I
Sbjct: 561 KKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHQIPIAEA 620
Query: 790 DISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILIYSKSR 849
D+ KTAFRTRYGH+EF+VM F LTNAPAAFM LMN VF+ FLD FVI+FIDDIL+YSKS
Sbjct: 621 DVRKTAFRTRYGHFEFVVMPFALTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVYSKSP 680
Query: 850 EEHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGHIVSKNGISVDPSKVEAVQNWPR 909
EEHE HLR V++ LRE++L+AK SKC FW + FLGHIVS G+SVDP K+EA+++WPR
Sbjct: 681 EEHEVHLRRVMEKLREQKLFAKLSKCSFWQREIGFLGHIVSAEGVSVDPEKIEAIRDWPR 740
Query: 910 PTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLKECLIS 969
PT+ EIRSFL L GYYRRFVK F+ +A P+T+LT K V F W+ CEE F LKE L S
Sbjct: 741 PTNATEIRSFLRLTGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSLKEMLTS 800
Query: 970 APILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVI 1029
P+LALP G Y+VY DASRVGLGCVLMQ GKVIAYASRQL++HE NYPTHDLEMA VI
Sbjct: 801 TPVLALPEHGQPYMVYTDASRVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAVVI 860
Query: 1030 FALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWMELLKDYDCTILYHPGKANV 1089
FALKIWR YLYG +++TDHKSLKYIF Q +LNLRQ RWMEL+ DYD I YHPGKANV
Sbjct: 861 FALKIWRSYLYGGKVQVFTDHKSLKYIFNQPELNLRQMRWMELVADYDLEIAYHPGKANV 920
Query: 1090 VADALSRKSMGSLAHLTAIKRPIVKEFQEIVESGVQFEIDHSRTLLAHMKFRSTLIDDIK 1149
VADALSRK +G+ + +V E ++ + L R+ L+ +
Sbjct: 921 VADALSRKRVGAAPGQSV--EALVSEI-----GALRLCVVAREPLGLEAVDRADLLTRAR 973
Query: 1150 QAQSQDSELMKMVDNVRNGKVSNFSVDSEGVLWLKSRICVPNVDDLRRKILEEAHHSSYT 1209
AQ +D L+ + S + + G +++ R+CVP ++LRR+IL EAH S ++
Sbjct: 974 LAQEKDEGLIA----ASKAEGSEYQFAANGTIFVYGRVCVPKDEELRREILSEAHASMFS 1029
Query: 1210 IHPGSNKMYQDLREFYWWEGMKRDVANFVSKCLVCQQVKAEHQKPAGLLQPIEIPKWKWE 1269
IHPG+ KMY+DL+ +Y W GMKRDVAN+V++C VCQ VKAEHQ P
Sbjct: 1030 IHPGATKMYRDLKRYYQWVGMKRDVANWVAECDVCQLVKAEHQVP--------------- 1074
Query: 1270 GIAMDFVTGLPRTQKGFDSVWVIIDRLTKSAHFLPVKTTYTASQYAKIYLEEIVSLHGVP 1329
D++WVI+DRLTKSAHFL ++ T A+ AK Y+ EIV LHGVP
Sbjct: 1075 -----------------DAIWVIMDRLTKSAHFLAIRKTDGAAVLAKKYVSEIVKLHGVP 1117
Query: 1330 ISIISDRGAQFTAQFWKSFQAALGTRLNLSTAFHPQTDGQSERTIQILEDMLRACVLDLG 1389
+SI+SDR ++FT FW++FQA +GT++ +STA+HPQTDGQSERTIQ LEDMLR CVLD G
Sbjct: 1118 VSIVSDRDSKFTFAFWRAFQAKMGTKVQMSTAYHPQTDGQSERTIQTLEDMLRMCVLDWG 1177
Query: 1390 GSWDRYLPMMEFAYNNSYQSSIQMAPFEALYGRRCRSPIGWFEVGEAKLVGPELIQDAID 1449
G W +L ++EFAYNNSYQ+SI MAPFEALYGR C +P+ W +V E + G + +Q+ +
Sbjct: 1178 GHWADHLSLVEFAYNNSYQASIGMAPFEALYGRPCWTPLRWTQVEERSIYGADYVQETTE 1237
Query: 1450 KVKLIRDRLVTAQSRQKSYSDKRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIG 1509
++++++ + AQ+RQ+SY+DKRRR LEF VG+ V+L+++ ++G R + KL+PR++G
Sbjct: 1238 RIRVLKLNMKEAQARQRSYADKRRRELEFEVGDRVYLKMAMLRGPNRSILETKLSPRYMG 1297
Query: 1510 PFEILERVGPVAYRLALPPDLSRVHPVFHISMLRKYIYDPSHVISHKDVQLDENLSYTEH 1569
PF I+ERVGPVAYRL LP + H VFH+ MLRK ++ V+ L N++
Sbjct: 1298 PFRIVERVGPVAYRLELPDVMRAFHKVFHVLMLRKCLHKDDEVLVKIPEDLQPNMTLEAR 1357
Query: 1570 PVALVDKGVRRLRSKDIVSVKVLWKGPSGEETTWEPEETIRGKYPHLFENQ 1620
PV ++++ ++ LR K I +KVLW E TWEPE ++ ++ FE Q
Sbjct: 1358 PVRVLERRIKELRRKKIPLIKVLWDCDGVTEETWEPEARMKARFKKWFEKQ 1408
Score = 68.9 bits (167), Expect = 2e-11
Identities = 84/297 (28%), Positives = 134/297 (44%), Gaps = 35/297 (11%)
Query: 23 GTRHRGRGRARGGRGVNVRGRGVNAGRHAFDEELFDVEVPRRRRGNPVVENANLQGLQQV 82
G R RGRGR GRG + G G + G A E+ + G A++ G V
Sbjct: 6 GVRGRGRGR---GRGRVLEGIGESDGHSATVEQSVGSQPEFVEPGVRNGLGADIAGAAGV 62
Query: 83 VQQLVEIVAGQQQGNQTHE-NLEG--QQEVRQVDQVV-----VAPTRGIEVTLAEFLKLK 134
LVE+V+ G Q E L G +Q + ++ VV VAP R EV + +
Sbjct: 63 --GLVELVSVPGPGAQVPEVGLAGLLRQLLERLPGVVPVEAPVAP-RMAEVQQRAAVAEE 119
Query: 135 PPT---------------FSGSSVSEDPQRFIDGLERLWRALGCSDVRAVELTSYQLEGV 179
P+ FS + E+ + ++R + + C V+L + LEG
Sbjct: 120 VPSYLRMMEQLQRIGTWYFSSGTSPEEADSWRSRVQRNFGSSRCPAEYRVDLAVHFLEGD 179
Query: 180 AHDWFDTVTHGRQMGSSPMAWKEFSKLFMARFLPQSVRDQLAHEFEIFEQTEG-MSVSEY 238
AH W+ +VT R+ + M+W +F F A++ PQ D++ E E T+G SV EY
Sbjct: 180 AHLWWRSVTARRR--QADMSWADFVAEFNAKYFPQEALDRM--EARFLELTQGEWSVREY 235
Query: 239 SARFTQLSRYAAYCVTEEM-RIKKFIRGLREYIFRSVVGSNCQTFADVLSLALQIEQ 294
F +L YA + ++ ++++F+RGLR + S T A ++ A ++E+
Sbjct: 236 DREFNRLLAYAGRGMEDDQAQMRRFLRGLRPDLRVQCRVSQYATKAALVETAAEVEE 292
>At3g31970 hypothetical protein
Length = 1329
Score = 775 bits (2002), Expect = 0.0
Identities = 406/853 (47%), Positives = 541/853 (62%), Gaps = 83/853 (9%)
Query: 768 GAQCFSKIDLRSGYHQLKIKSEDISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVF 827
G S I + + + I ++ KTAFRTRYGH+EF+VM FGLTN P AFM LMN VF
Sbjct: 557 GQVAVSDIRVVHEFEDIPIAEANVRKTAFRTRYGHFEFVVMPFGLTNIPTAFMRLMNSVF 616
Query: 828 KPFLDRFVIVFIDDILIYSKSREEHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGH 887
+ FLD FVI+FIDDIL+YSKS EEHE ++ ++ + + E
Sbjct: 617 QEFLDEFVIIFIDDILVYSKSPEEHE---------VQSEESDGEAAGAEV---------- 657
Query: 888 IVSKNGISVDPSKVEAVQNWPRPTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKK 947
G+SVD K+EA+++WPRPT+ EIRSFLGLAGYY+RFVK F+ +A P+T+LT K
Sbjct: 658 -----GVSVDLEKIEAIRDWPRPTNATEIRSFLGLAGYYKRFVKVFASMAQPMTKLTGKD 712
Query: 948 VEFKWTDACEESFQKLKECLISAPILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYA 1007
V F W+ C+E F LKE L S P+LALP G Y+VY DASRVGL CVLMQ GKV
Sbjct: 713 VPFVWSPECDEGFMSLKEMLTSTPVLALPEHGEPYMVYTDASRVGLDCVLMQRGKV---- 768
Query: 1008 SRQLKRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQR 1067
+TDHKSLKYIF Q +LNLRQR
Sbjct: 769 ---------------------------------------FTDHKSLKYIFTQPELNLRQR 789
Query: 1068 RWMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHLTAIKRPIVKEFQEIVESGVQFE 1127
RWMEL+ DYD I YH GKANVVADALSRK +G +V E ++
Sbjct: 790 RWMELVADYDLEIAYHSGKANVVADALSRKRVGGSVEA------LVSEI-----GALRLC 838
Query: 1128 IDHSRTLLAHMKFRSTLIDDIKQAQSQDSELMKMVDNVRNGKVSNFSVDSEGVLWLKSRI 1187
+ L R+ L+ ++ AQ +D L+ S + + G + + R+
Sbjct: 839 VMAQEPLGLEAVDRADLLTRVRLAQEKDEGLIA----ASKADGSEYQFAANGTILVHGRV 894
Query: 1188 CVPNVDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEGMKRDVANFVSKCLVCQQV 1247
CVP ++LRR+IL EAH S ++IHP + KMY+DL+ +Y W GMKRDVAN+V++C VCQ V
Sbjct: 895 CVPKDEELRREILSEAHASMFSIHPRATKMYRDLKRYYQWVGMKRDVANWVTECDVCQLV 954
Query: 1248 KAEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKGFDSVWVIIDRLTKSAHFLPVKT 1307
KAEHQ P GLLQ + I +WKW+ I MDFV GLP + D++WVI+DRLTKSAHFL ++
Sbjct: 955 KAEHQVPGGLLQSLPILEWKWDFITMDFVVGLP-VSRTKDAIWVIVDRLTKSAHFLAIRK 1013
Query: 1308 TYTASQYAKIYLEEIVSLHGVPISIISDRGAQFTAQFWKSFQAALGTRLNLSTAFHPQTD 1367
T A AK Y+ EIV LHGVP+SI+SDR ++FT+ FW++FQ +GT++ +STA+HPQTD
Sbjct: 1014 TDGAVLLAKKYVSEIVELHGVPVSIVSDRDSKFTSAFWRAFQGEMGTKVQMSTAYHPQTD 1073
Query: 1368 GQSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAYNNSYQSSIQMAPFEALYGRRCRSP 1427
GQSERTIQ LEDMLR CVLD GG W +L ++EFAYNNSYQ+SI+MAPFEALYGR CR+P
Sbjct: 1074 GQSERTIQTLEDMLRMCVLDRGGHWADHLSLVEFAYNNSYQASIRMAPFEALYGRPCRTP 1133
Query: 1428 IGWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQKSYSDKRRRPLEFTVGEHVFLR 1487
+ W +VGE + G + + + +++++++ + AQ RQ+SY+DKRRR LEF VG+ V+L+
Sbjct: 1134 LCWTQVGERSIYGADYVLETTERIRVLKLNMKEAQDRQRSYADKRRRELEFEVGDRVYLK 1193
Query: 1488 VSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLALPPDLSRVHPVFHISMLRKYIY 1547
++ ++G R + KLTPR++GPF I+ERVGPVAYRL LP + H VFH+SMLRK ++
Sbjct: 1194 MAMLRGPNRSISETKLTPRYMGPFRIVERVGPVAYRLELPDVMRAFHKVFHVSMLRKCLH 1253
Query: 1548 DPSHVISHKDVQLDENLSYTEHPVALVDKGVRRLRSKDIVSVKVLWKGPSGEETTWEPEE 1607
V++ L N++ PV ++++ ++ LR K I +KVLW E TWEPE
Sbjct: 1254 KDDEVLAKILEDLQPNMTLEARPVRILERRIKELRRKKIPLIKVLWNCDGVTEETWEPEA 1313
Query: 1608 TIRGKYPHLFENQ 1620
++ + FE Q
Sbjct: 1314 RMKASFKKWFEKQ 1326
Score = 89.0 bits (219), Expect = 2e-17
Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 40/262 (15%)
Query: 401 QKGHIKKNCPIPTTQPSSSRASAPVALASSHSPSAPVRQEGNSFVRGSGASQHGGRGPGG 460
++GH++ NCP A A V A H A V+Q + A Q
Sbjct: 350 ERGHLRPNCP-----KLQRMAVAVVQPAVQHG--AQVQQRVQQLAHIAAAPQ-------- 394
Query: 461 RGQSQVGRGHARVFALTRQDAQASNAVVTGTLSVCSQDAHVLFDPGATYSFVSLYFAPRL 520
G+ TR+ S +T +AHVLFD GA++ F++ A R
Sbjct: 395 --------GYT-----TREIGSTSKRAIT--------EAHVLFDSGASHCFITPESASR- 432
Query: 521 GKSSSFLDETLVVTTPVGNNVLAK-SVYYSCDVSIEGKVLPADLVVLNMVDFDVILGMDW 579
G E L G LA D+ I G+ +P DL++ + +DVILGMDW
Sbjct: 433 GNIRGDPGEQLGAVKVAGGQFLAVLGRAKGVDIQIAGESMPVDLIISPVELYDVILGMDW 492
Query: 580 LSLHHATVDCHNKVVKFKPPGEATFSFQGERSWVPNNLISSLRANKLLSRGCQGYLALVR 639
L + +DCH V F+ P E +Q R + +IS+++A K++ +GC+ YL +
Sbjct: 493 LDHYRVHLDCHRGRVSFERP-EGRLVYQRVRPTSRSLVISAVQAEKMIEKGCEAYLVTIS 551
Query: 640 DVQA-GEEKLENVPIVCEFSDV 660
++ G+ + ++ +V EF D+
Sbjct: 552 MPESVGQVAVSDIRVVHEFEDI 573
Score = 67.8 bits (164), Expect = 5e-11
Identities = 76/284 (26%), Positives = 125/284 (43%), Gaps = 19/284 (6%)
Query: 34 GGRGVNVRGRGVNAGRHAFDEELFDVEVPRRRRGNPVVENANLQGL-QQVVQQLVEIVAG 92
G GV G V AG HA E V G V L GL +Q++++L +V
Sbjct: 62 GAAGVGAGGADVGAGVHAVGAE--GPRVMGAAAGGAQVPGVGLAGLLRQLLERLPGVVPV 119
Query: 93 QQQGNQTHENLEGQQEVRQVDQVVVAPTRGIEVTLAEFLKLKPPTFSGSSVSEDPQRFID 152
Q + Q+ V + V + R +E + ++ F G + E+ +
Sbjct: 120 QAP---VAPRVAEVQQRAAVAEEVPSYLRMME----QLQRIGTRYFFGGTSPEEADSWKS 172
Query: 153 GLERLWRALGCSDVRAVELTSYQLEGVAHDWFDTVTHGRQMGSSPMAWKEFSKLFMARFL 212
+E + + C V+L + LEG AH W+ +VT R+ + M+W +F F A++
Sbjct: 173 RVEHNFGSSRCPAEYRVDLAVHFLEGDAHLWWRSVTARRR--QAHMSWADFVAEFNAKYF 230
Query: 213 PQSVRDQLAHEFEIFEQTEG-MSVSEYSARFTQLSRYAAYCVTEEM-RIKKFIRGLREYI 270
PQ D++ E E T+G SV EY F +L YA + ++ ++++F+RGLR +
Sbjct: 231 PQEALDRM--EARFLELTQGERSVREYEREFNRLLVYAGRGMQDDQAQMRRFLRGLRPDL 288
Query: 271 FRSVVGSNCQTFADVLSLALQIE---QRQKDKGGTRQDPRKKQR 311
T A ++ A ++E QRQ P+K Q+
Sbjct: 289 RVRCRVLQYATKAALVETAAEVEEDLQRQVVGVSPAVKPKKTQQ 332
>At3g11970 hypothetical protein
Length = 1499
Score = 729 bits (1882), Expect = 0.0
Identities = 416/1125 (36%), Positives = 646/1125 (56%), Gaps = 63/1125 (5%)
Query: 501 VLFDPGATYSFVSLYFAPRLGKSSSFLDETLVVTTPVGNNVLAKSVYYSCDVSIEGKVLP 560
+L D G+T++F+ A +LG T V G + + ++
Sbjct: 403 ILIDSGSTHNFLDPNTAAKLGCKVDTAGLTRVSVAD-GRKLRVEGKVTDFSWKLQTTTFQ 461
Query: 561 ADLVVLNMVDFDVILGMDWL-SLHHATVDCHNKVVKFKPPGEATFSF---QGERSWVPNN 616
+D++++ + D++LG+ WL +L + + ++FK + G V
Sbjct: 462 SDILLIPLQGIDMVLGVQWLETLGRISWEFKKLEMRFKFNNQKVLLHGLTSGSVREVKAQ 521
Query: 617 LISSLRANKL---------LSRGCQGYLALVRDV--QAGEEKLENVPIVCEFSDVFPEEL 665
+ L+ +++ +S +G L + + + GEE + ++ E+ D+F E
Sbjct: 522 KLQKLQEDQVQLAMLCVQEVSESTEGELCTINALTSELGEESVVE-EVLNEYPDIFIEPT 580
Query: 666 PGIPPDREIE-FSIDLIPGTQPISIPPYRMAPAELKELREQLQDLLDKGFIRASTSPWGA 724
+PP RE I L+ G+ P++ PYR + + E+ + ++DLL G ++AS+SP+ +
Sbjct: 581 -ALPPFREKHNHKIKLLEGSNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQASSSPYAS 639
Query: 725 PVLFVKKKDGSMRLCVDYRQLNKVTIKNKYPLPRIDELFDQLQGAQCFSKIDLRSGYHQL 784
PV+ VKKKDG+ RLCVDYR+LN +T+K+ +P+P I++L D+L GA FSKIDLR+GYHQ+
Sbjct: 640 PVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQV 699
Query: 785 KIKSEDISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILI 844
++ +DI KTAF+T GH+E+LVM FGLTNAPA F LMN +FKPFL +FV+VF DDIL+
Sbjct: 700 RMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILV 759
Query: 845 YSKSREEHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGHIVSKNGISVDPSKVEAV 904
YS S EEH QHL+ V + +R +L+AK SKC F + V +LGH +S GI DP+K++AV
Sbjct: 760 YSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKAV 819
Query: 905 QNWPRPTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLK 964
+ WP+PT++K++R FLGLAGYYRRFV+ F +A PL LT K F+WT +++F+ LK
Sbjct: 820 KEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALT-KTDAFEWTAVAQQAFEDLK 878
Query: 965 ECLISAPILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLE 1024
L AP+L+LP +VV DA G+G VLMQ G +AY SRQLK + + ++ E
Sbjct: 879 AALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKE 938
Query: 1025 MAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWMELLKDYDCTILYHP 1084
+ AVIFA++ WRHYL I TD +SLKY+ EQR Q++W+ L ++D I Y
Sbjct: 939 LLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQ 998
Query: 1085 GKANVVADALSRKSMGSLAHLTAIKRPIVKEFQEIVESGVQFEIDHSRTLLAHMKFRSTL 1144
GK NVVADALSR + H+ +VE L
Sbjct: 999 GKENVVADALSRVEGSEVLHMA----------MTVVE--------------------CDL 1028
Query: 1145 IDDIKQAQSQDSELMKMVDNV-RNGKVSNFSVDSEGVLWLKSRICVPNVDDLRRKILEEA 1203
+ DI+ + DS+L ++ + R+ + S+ +L KS+I VP D+++ IL
Sbjct: 1029 LKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKNTILLWL 1088
Query: 1204 HHSSYTIHPGSNKMYQDLREFYWWEGMKRDVANFVSKCLVCQQVKAEHQKPAGLLQPIEI 1263
H S H G + +Q ++ ++W+GM +D+ ++ C CQQ K++ GLLQP+ I
Sbjct: 1089 HGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLPI 1148
Query: 1264 PKWKWEGIAMDFVTGLPRTQKGFDSVWVIIDRLTKSAHFLPVKTTYTASQYAKIYLEEIV 1323
P W ++MDF+ GLP G + V++DRL+K+AHF+ + Y+A A YL+ +
Sbjct: 1149 PDTIWSEVSMDFIEGLP-VSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVF 1207
Query: 1324 SLHGVPISIISDRGAQFTAQFWKSFQAALGTRLNLSTAFHPQTDGQSERTIQILEDMLRA 1383
LHG P SI+SDR FT++FW+ F G L L++A+HPQ+DGQ+E + LE LR
Sbjct: 1208 KLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRC 1267
Query: 1384 CVLDLGGSWDRYLPMMEFAYNNSYQSSIQMAPFEALYGRRCRSPIGWFEVGEAKL-VGPE 1442
D W ++L + E+ YN +Y SS +M PFE +YG+ + + GE+K+ V
Sbjct: 1268 MCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLP-GESKVAVVAR 1326
Query: 1443 LIQDAIDKVKLIRDRLVTAQSRQKSYSDKRRRPLEFTVGEHVFLRVSPMKG---VLRFGK 1499
+Q+ D + ++ L+ AQ R K ++D+ R EF +G++V++++ P + V+R +
Sbjct: 1327 SLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQ 1386
Query: 1500 KGKLTPRFIGPFEILERVGPVAYRLALPPDLSRVHPVFHISMLRKYIYDPSHVISHKDVQ 1559
KL+P++ GP++I++R G VAY+LAL P S+VHPVFH+S L+ + + S + V
Sbjct: 1387 --KLSPKYFGPYKIIDRCGEVAYKLAL-PSYSQVHPVFHVSQLKVLVGNVSTTVHLPSVM 1443
Query: 1560 LDENLSYTEHPVALVDKGVRRLRSKDIVSVKVLWKGPSGEETTWE 1604
D + + P +V++ + + K + V V W EE TWE
Sbjct: 1444 QD---VFEKVPEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWE 1485
>At1g36590 hypothetical protein
Length = 1499
Score = 724 bits (1870), Expect = 0.0
Identities = 415/1125 (36%), Positives = 646/1125 (56%), Gaps = 63/1125 (5%)
Query: 501 VLFDPGATYSFVSLYFAPRLGKSSSFLDETLVVTTPVGNNVLAKSVYYSCDVSIEGKVLP 560
+L D G+T++F+ A +LG T V G + + ++
Sbjct: 403 ILIDSGSTHNFLDPNTAAKLGCKVDTAGLTRVSVAD-GRKLRVEGKVTDFSWKLQTTTFQ 461
Query: 561 ADLVVLNMVDFDVILGMDWL-SLHHATVDCHNKVVKFKPPGEATFSF---QGERSWVPNN 616
+D++++ + D++LG+ WL +L + + ++FK + G V
Sbjct: 462 SDILLIPLQGIDMVLGVQWLETLGRISWEFKKLEMRFKFNNQKVLLHGLTSGSVREVKAQ 521
Query: 617 LISSLRANKL---------LSRGCQGYLALVRDV--QAGEEKLENVPIVCEFSDVFPEEL 665
+ L+ +++ +S +G L + + + GEE + ++ E+ D+F E
Sbjct: 522 KLQKLQEDQVQLAMLCVQEVSESTEGELCTINALTSELGEESVVE-EVLNEYPDIFIEPT 580
Query: 666 PGIPPDREIE-FSIDLIPGTQPISIPPYRMAPAELKELREQLQDLLDKGFIRASTSPWGA 724
+PP RE I L+ G+ P++ PYR + + E+ + ++DLL G ++AS+SP+ +
Sbjct: 581 -ALPPFREKHNHKIKLLEGSNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQASSSPYAS 639
Query: 725 PVLFVKKKDGSMRLCVDYRQLNKVTIKNKYPLPRIDELFDQLQGAQCFSKIDLRSGYHQL 784
PV+ VKKKDG+ RLCVDYR+LN +T+K+ +P+P I++L D+L GA FSKIDLR+GYHQ+
Sbjct: 640 PVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQV 699
Query: 785 KIKSEDISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILI 844
++ +DI KTAF+T GH+E+LVM FGLTNAPA F LMN +FKPFL +FV+VF DDIL+
Sbjct: 700 RMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILV 759
Query: 845 YSKSREEHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGHIVSKNGISVDPSKVEAV 904
YS S EEH QHL+ V + +R +L+AK SKC F + V +LGH +S GI DP+K++AV
Sbjct: 760 YSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKAV 819
Query: 905 QNWPRPTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLK 964
+ WP+PT++K++R FLGLAGYYRRFV+ F +A PL LT K F+WT +++F+ LK
Sbjct: 820 KEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALT-KTDAFEWTAVAQQAFEDLK 878
Query: 965 ECLISAPILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLE 1024
L AP+L+LP +VV DA G+G VLMQ G +AY SRQLK + + ++ E
Sbjct: 879 AALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKE 938
Query: 1025 MAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWMELLKDYDCTILYHP 1084
+ AVIFA++ WRHYL I TD +SLKY+ EQR Q++W+ L ++D I Y
Sbjct: 939 LLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQ 998
Query: 1085 GKANVVADALSRKSMGSLAHLTAIKRPIVKEFQEIVESGVQFEIDHSRTLLAHMKFRSTL 1144
GK NVVADALSR + H+ +VE L
Sbjct: 999 GKENVVADALSRVEGSEVLHMA----------MTVVE--------------------CDL 1028
Query: 1145 IDDIKQAQSQDSELMKMVDNV-RNGKVSNFSVDSEGVLWLKSRICVPNVDDLRRKILEEA 1203
+ DI+ + DS+L ++ + R+ + S+ +L KS+I VP D+++ IL
Sbjct: 1029 LKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKNTILLWL 1088
Query: 1204 HHSSYTIHPGSNKMYQDLREFYWWEGMKRDVANFVSKCLVCQQVKAEHQKPAGLLQPIEI 1263
H S H G + +Q ++ ++ +GM +D+ ++ C CQQ K++ GLLQP+ I
Sbjct: 1089 HGSGVGGHSGRDVTHQRVKGLFYSKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLPI 1148
Query: 1264 PKWKWEGIAMDFVTGLPRTQKGFDSVWVIIDRLTKSAHFLPVKTTYTASQYAKIYLEEIV 1323
P W ++MDF+ GLP G + V++DRL+K+AHF+ + Y+A A+ YL+ +
Sbjct: 1149 PDTIWSEVSMDFIEGLP-VSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAQAYLDNVF 1207
Query: 1324 SLHGVPISIISDRGAQFTAQFWKSFQAALGTRLNLSTAFHPQTDGQSERTIQILEDMLRA 1383
LHG P SI+SDR FT++FW+ F G L L++A+HPQ+DGQ+E + LE LR
Sbjct: 1208 KLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRC 1267
Query: 1384 CVLDLGGSWDRYLPMMEFAYNNSYQSSIQMAPFEALYGRRCRSPIGWFEVGEAKL-VGPE 1442
D W ++L + E+ YN +Y SS +M PFE +YG+ + + GE+K+ V
Sbjct: 1268 MCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLP-GESKVAVVAR 1326
Query: 1443 LIQDAIDKVKLIRDRLVTAQSRQKSYSDKRRRPLEFTVGEHVFLRVSPMKG---VLRFGK 1499
+Q+ D + ++ L+ AQ R K ++D+ R EF +G++V++++ P + V+R +
Sbjct: 1327 SLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQ 1386
Query: 1500 KGKLTPRFIGPFEILERVGPVAYRLALPPDLSRVHPVFHISMLRKYIYDPSHVISHKDVQ 1559
KL+P++ GP++I++R G VAY+LAL P S+VHPVFH+S L+ + + S + V
Sbjct: 1387 --KLSPKYFGPYKIIDRCGEVAYKLAL-PSYSQVHPVFHVSQLKVLVGNVSTTVHLPSVM 1443
Query: 1560 LDENLSYTEHPVALVDKGVRRLRSKDIVSVKVLWKGPSGEETTWE 1604
D + + P +V++ + + K + V V W EE TWE
Sbjct: 1444 QD---VFEKVPEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWE 1485
>At4g10580 putative reverse-transcriptase -like protein
Length = 1240
Score = 718 bits (1854), Expect = 0.0
Identities = 350/552 (63%), Positives = 428/552 (77%), Gaps = 3/552 (0%)
Query: 551 DVSIEGKVLPADLVVLNMVDFDVILGMDWLSLHHATVDCHNKVVKFKPPGEATFSFQGER 610
D+ I G+ +PADL++ + +DVILGMDWL + +D H V F+ P E +QG R
Sbjct: 357 DIQIAGESMPADLIISPVELYDVILGMDWLDYYRVHLDWHRGRVFFERP-EGRLVYQGVR 415
Query: 611 SWVPNNLISSLRANKLLSRGCQGYLALVRDVQA-GEEKLENVPIVCEFSDVFPEELPGIP 669
+ +IS+++A K++ +GC+ YL + ++ G+ + ++ +V EF DVF + L G+P
Sbjct: 416 PISGSLVISAVQAEKMIEKGCEAYLVTISMPESVGQVAVSDIRVVQEFQDVF-QSLQGLP 474
Query: 670 PDREIEFSIDLIPGTQPISIPPYRMAPAELKELREQLQDLLDKGFIRASTSPWGAPVLFV 729
P + F+I+L PGT P+S PYRMAPAE+ EL++QL+DLL KGFIR STSPWGAPVLFV
Sbjct: 475 PSQSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLKDLLGKGFIRPSTSPWGAPVLFV 534
Query: 730 KKKDGSMRLCVDYRQLNKVTIKNKYPLPRIDELFDQLQGAQCFSKIDLRSGYHQLKIKSE 789
KKKDGS RLC+DYR+LN+VT+KN+YPLPRIDEL DQL+GA CFSKIDL SGYHQ+ I
Sbjct: 535 KKKDGSFRLCIDYRELNRVTVKNRYPLPRIDELLDQLRGATCFSKIDLTSGYHQIPIAEA 594
Query: 790 DISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILIYSKSR 849
D+ KTAFRTRYGH+EF+VM FGLTNAPA FM LMN VF+ FLD FVI+FIDDIL+YSKS
Sbjct: 595 DVRKTAFRTRYGHFEFVVMPFGLTNAPAVFMRLMNSVFQEFLDEFVIIFIDDILVYSKSP 654
Query: 850 EEHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGHIVSKNGISVDPSKVEAVQNWPR 909
EE E HLR V++ LRE++L+AK SKC FW + FLGHIVS G+SVDP K+EA+++WPR
Sbjct: 655 EEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEAIRDWPR 714
Query: 910 PTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLKECLIS 969
PT+ EIRSFLG AGYYRRFVK F+ +A P+T+LT K V F W+ CEE F LKE L S
Sbjct: 715 PTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSQECEEGFVSLKEMLTS 774
Query: 970 APILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVI 1029
P+LALP G Y+VY DASRVGLGCVLMQHGKVIAYASRQL +HE NYPTHDLEMAAVI
Sbjct: 775 TPVLALPEHGQPYMVYTDASRVGLGCVLMQHGKVIAYASRQLMKHEGNYPTHDLEMAAVI 834
Query: 1030 FALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWMELLKDYDCTILYHPGKANV 1089
FALKIWR YLYG +++TDHKSLKYIF Q +LNLRQRRWMEL+ DYD I YHPGKANV
Sbjct: 835 FALKIWRSYLYGGKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYHPGKANV 894
Query: 1090 VADALSRKSMGS 1101
V DALSRK +G+
Sbjct: 895 VVDALSRKRVGA 906
Score = 144 bits (363), Expect = 4e-34
Identities = 72/150 (48%), Positives = 101/150 (67%), Gaps = 3/150 (2%)
Query: 1214 SNKMYQDLREFYWWEGMKRDVANFVSKCLVCQQVKAEHQKPAGLLQPIEIPKWKWEGIAM 1273
+ KMY+DL+ +Y W GMK DVAN+V++C VCQ VKAEHQ G+LQ + IP+WKW+ I M
Sbjct: 958 ATKMYRDLKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLPIPEWKWDFITM 1017
Query: 1274 DFVTGLPRTQKGFDSVWVIIDRLTKSAHFLPVKTTYTASQYAKIYLEEIVSLHGVPISI- 1332
D V GL R + D++WVI+DRLTKSAHFL ++ T A+ AK ++ EIV LHGVP+++
Sbjct: 1018 DLVVGL-RVSRTKDAIWVIVDRLTKSAHFLAIRKTDGAAVLAKKFVSEIVKLHGVPLNMK 1076
Query: 1333 -ISDRGAQFTAQFWKSFQAALGTRLNLSTA 1361
DR + + + + +G R+ L A
Sbjct: 1077 EAQDRQRSYADKRRRELEFEVGDRVYLKMA 1106
Score = 143 bits (360), Expect = 9e-34
Identities = 69/160 (43%), Positives = 103/160 (64%)
Query: 1461 AQSRQKSYSDKRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPV 1520
AQ RQ+SY+DKRRR LEF VG+ V+L+++ ++G R + KL+PR++GPF+I+ERV PV
Sbjct: 1078 AQDRQRSYADKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPFKIVERVEPV 1137
Query: 1521 AYRLALPPDLSRVHPVFHISMLRKYIYDPSHVISHKDVQLDENLSYTEHPVALVDKGVRR 1580
AYRL LP + H VFH+SMLRK ++ ++ L N++ PV ++++ ++
Sbjct: 1138 AYRLELPDVMRAFHKVFHVSMLRKCLHKDDEALAKIPEDLQPNMTLEARPVRVLERRIKE 1197
Query: 1581 LRSKDIVSVKVLWKGPSGEETTWEPEETIRGKYPHLFENQ 1620
LR K I +KVLW E TWEPE ++ ++ FE Q
Sbjct: 1198 LRQKKIPLIKVLWDCDGVTEETWEPEARMKARFKKWFEKQ 1237
Score = 53.1 bits (126), Expect = 1e-06
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 42/282 (14%)
Query: 34 GGRGVNVRGRGVNAGRHAFDEELFDVEVPRRRRGNPVVENANLQGL-QQVVQQLVEIVAG 92
G GV G GV G HA E V G V L GL +Q++++L +V
Sbjct: 56 GATGVGAGGAGVGTGVHAVGAE--GPGVMGAAAGGAQVPEVGLAGLLRQLLERLPGVVPV 113
Query: 93 QQQGNQTHENLEGQQEVRQVDQVVVAPTRGIEVTLAEFLKLKPPTFSGSSVSEDPQRFID 152
+ + Q+ V + V++ R +E + ++ FSG + E+ +
Sbjct: 114 E---TPVAPRVAEVQQRAAVAEEVLSYLRMME----QLQRIDTGYFSGGTSPEEADSWRS 166
Query: 153 GLERLWRALGCSDVRAVELTSYQLEGVAHDWFDTVTHGRQMGSSPMAWKEFSKLFMARFL 212
+ R + + C V+L + LEG AH W+ +VT R+ + M+W +F F A++
Sbjct: 167 RVGRNFGSSRCPAEYRVDLAVHFLEGDAHLWWRSVTARRR--QTDMSWADFVAEFKAKYF 224
Query: 213 PQSVRDQLAHEFEIFEQTEGMSVSEYSARFTQLSRYAAYCVTEEMRIKKFIRGLREYIFR 272
PQ D A +GM ++ ++++F+RGLR +
Sbjct: 225 PQEALDPYA--------GQGME-------------------DDQAQMRRFLRGLRPDLRV 257
Query: 273 SVVGSNCQTFADVLSLALQIE---QRQKDKGGTRQDPRKKQR 311
S T A ++ A ++E QRQ P+K Q+
Sbjct: 258 RCRVSQYATKAALVETAAEVEEDFQRQVVGVSPVVQPKKTQQ 299
>At2g14650 putative retroelement pol polyprotein
Length = 1328
Score = 691 bits (1782), Expect = 0.0
Identities = 356/618 (57%), Positives = 434/618 (69%), Gaps = 34/618 (5%)
Query: 484 SNAVVTGTLSVCSQDAHVLFDPGATYSFVSLYFAPRLGKSSSFLDETLVVTTPVGNNVLA 543
++ V GTL V +AHVLFD GA++ F++ A R ++ V G V
Sbjct: 298 AHEVCVGTLLVGGVEAHVLFDSGASHCFITPESASRGNIRGDPGEQLGAVKVAGGQFVAV 357
Query: 544 KSVYYSCDVSIEGKVLPADLVVLNMVDFDVILGMDWLSLHHATVDCHNKVVKFKPPGEAT 603
D+ I G+ +PADL++ + +DVILGMDWL + +DCH V F+ P E +
Sbjct: 358 LGRTKGVDIQIAGESMPADLIISPVELYDVILGMDWLDHYRVHLDCHRGRVSFERP-EGS 416
Query: 604 FSFQGERSWVPNNLISSLRANKLLSRGCQGYLALVRDVQAGEEKLENVPIVCEFSDVFPE 663
+QG R + +IS+++A K++ +GC+ YL EF DVF +
Sbjct: 417 LVYQGVRPTSGSLVISAVQAEKMIEKGCEAYL--------------------EFEDVF-Q 455
Query: 664 ELPGIPPDREIEFSIDLIPGTQPISIPPYRMAPAELKELREQLQDLLDKGFIRASTSPWG 723
L G+PP R F+I+L PGT P+S PYRMAPAE+ EL++QL+DLL G
Sbjct: 456 SLQGLPPSRSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLEDLL------------G 503
Query: 724 APVLFVKKKDGSMRLCVDYRQLNKVTIKNKYPLPRIDELFDQLQGAQCFSKIDLRSGYHQ 783
APVLFVKKKDGS RLC+DYR LN VT+KNKYPLPRIDEL DQL+GA CFSKIDL SGYH
Sbjct: 504 APVLFVKKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHL 563
Query: 784 LKIKSEDISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDIL 843
+ I D+ KTAFRTRYGH+EF+VM FGLTNAPAAFM LMN VF+ LD FVI+FIDDIL
Sbjct: 564 IPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEVLDEFVIIFIDDIL 623
Query: 844 IYSKSREEHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGHIVSKNGISVDPSKVEA 903
+YSKS EEHE HLR V++ LRE++L+AK SKC FW + FLGHIVS G+SVDP K+EA
Sbjct: 624 VYSKSLEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 683
Query: 904 VQNWPRPTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKL 963
+++W PT+ EIRSFLGLAGYYRRFVK F+ +A P+T+LT K V F W+ CEE F L
Sbjct: 684 IRDWHTPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSL 743
Query: 964 KECLISAPILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDL 1023
KE L S P+LALP G Y+VY DAS VGLGCVLMQ GKVIAYASRQL++HE NYPTHDL
Sbjct: 744 KEMLTSTPVLALPEHGEPYMVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDL 803
Query: 1024 EMAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWMELLKDYDCTILYH 1083
EMAAVIFALKIWR YLYG +++TDHKSLKYIF Q +LNLRQR+WMEL+ DYD I YH
Sbjct: 804 EMAAVIFALKIWRSYLYGGNVQVFTDHKSLKYIFTQPELNLRQRQWMELVADYDLEIAYH 863
Query: 1084 PGKANVVADALSRKSMGS 1101
PGKANVVADALS K +G+
Sbjct: 864 PGKANVVADALSHKRVGA 881
Score = 414 bits (1063), Expect = e-115
Identities = 197/386 (51%), Positives = 278/386 (71%), Gaps = 1/386 (0%)
Query: 1233 DVANFVSKCLVCQQVKAEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKGFDSVWVI 1292
DVAN+V++C VCQ VKAEHQ P G+LQ + IP+WKW+ I +DFV GLP + D++WVI
Sbjct: 942 DVANWVAECDVCQLVKAEHQVPGGMLQSLPIPEWKWDFITIDFVVGLP-VSRTKDAIWVI 1000
Query: 1293 IDRLTKSAHFLPVKTTYTASQYAKIYLEEIVSLHGVPISIISDRGAQFTAQFWKSFQAAL 1352
+DRLTKSAHFL ++ T A+ AK Y+ EIV LHGVP+SI+SDR ++FT+ FW++FQA +
Sbjct: 1001 VDRLTKSAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQAEM 1060
Query: 1353 GTRLNLSTAFHPQTDGQSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAYNNSYQSSIQ 1412
GT++ +STA+HPQT GQSERTIQ LEDMLR CVLD GG W +L ++EFAYNNSY +SI
Sbjct: 1061 GTKVQMSTAYHPQTYGQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYPASIG 1120
Query: 1413 MAPFEALYGRRCRSPIGWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQKSYSDKR 1472
MAPFEALY R CR+P+ +VGE + G + +Q+ +++++++ + AQ RQ+SY+DKR
Sbjct: 1121 MAPFEALYERPCRTPLCLTQVGERSIYGADYVQETTERIRVLKLNMKEAQDRQRSYADKR 1180
Query: 1473 RRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLALPPDLSR 1532
RR LEF VG+ V+L+++ ++G R + KL+PR++GPF I+ERVGPVAYRL LP +
Sbjct: 1181 RRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPFRIVERVGPVAYRLELPDVMRA 1240
Query: 1533 VHPVFHISMLRKYIYDPSHVISHKDVQLDENLSYTEHPVALVDKGVRRLRSKDIVSVKVL 1592
H VFH+SMLRK ++ V++ L N++ PV ++++ ++ LR K I +KVL
Sbjct: 1241 FHKVFHVSMLRKCLHKDDEVLAKIPEDLQPNMTLEARPVRVLERRIKELRRKKIPLIKVL 1300
Query: 1593 WKGPSGEETTWEPEETIRGKYPHLFE 1618
W + TWEPE ++ ++ FE
Sbjct: 1301 WDCDGVTKETWEPEARMKARFKKWFE 1326
Score = 51.2 bits (121), Expect = 5e-06
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 16/201 (7%)
Query: 34 GGRGVNVRGRGVNAGRHAFDEELFDVEVPRRRRGNPVVENANLQGLQQVVQQLVEIVAG- 92
G GV G GV G HA E V G V L GL ++QL+E +AG
Sbjct: 60 GAAGVGAGGAGVGTGVHAVGAE--GPGVMGAAAGGVQVPEVGLAGL---LRQLLERLAGV 114
Query: 93 -QQQGNQTHENLEGQQEVRQVDQVVVAPTRGIEVTLAEFLKLKPPTFSGSSVSEDPQRFI 151
+ E QQ ++V + R +E + ++ FSG + E +
Sbjct: 115 VPVEAPVAPRVAEVQQRAAVAEEVP-SYLRMME----QLQRIGTGYFSGGTSPEVADSWR 169
Query: 152 DGLERLWRALGCSDVRAVELTSYQLEGVAHDWFDTVTHGRQMGSSPMAWKEFSKLFMARF 211
+ER + + C ++L + LEG AH W+ +VT R+ ++W +F F A++
Sbjct: 170 SRVERNFGSSRCPAEYRIDLAVHFLEGDAHLWWRSVTARRRQAD--ISWADFVAEFNAKY 227
Query: 212 LPQSVRDQLAHEFEIFEQTEG 232
PQ D++ E E T+G
Sbjct: 228 FPQEALDRM--EAHFLELTQG 246
>At4g16910 retrotransposon like protein
Length = 687
Score = 685 bits (1767), Expect = 0.0
Identities = 342/687 (49%), Positives = 466/687 (67%), Gaps = 18/687 (2%)
Query: 936 LAFPLTRLTQKKVEFKWTDACEESFQKLKECLISAPILALPTSGGGYVVYCDASRVGLGC 995
+A P+T+LT K F W++ CE SF +LK L +AP+L LP G Y VY DAS VGLGC
Sbjct: 1 MAQPMTQLTGKDTAFNWSEECERSFLELKAMLTNAPVLVLPEEGEPYTVYTDASIVGLGC 60
Query: 996 VLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTDHKSLKY 1055
VL+Q G VIAYASRQL++HE+NYPT+DLEMAAV+FALKIWR YLYG +I+TDHKSLKY
Sbjct: 61 VLIQKGSVIAYASRQLRKHEKNYPTNDLEMAAVVFALKIWRSYLYGAKVQIFTDHKSLKY 120
Query: 1056 IFEQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHLTAIKRPIVKE 1115
IF Q +LNLRQRRW++L+ DYD I YHPGKAN V DALSR A + +V
Sbjct: 121 IFTQPELNLRQRRWIKLVADYDLNIAYHPGKANQVVDALSRLRTVVEAERNQVN--LVNM 178
Query: 1116 FQEIVESGVQFEIDHSRTLLAHMKFRSTLIDDIKQAQSQDSELMKMVDNVRNGKVSNFSV 1175
+ + + E++ A+ ++ L+ I+ AQ +D E+ N + + +
Sbjct: 179 MGTLHLNALSKEVEPLGLRAAN---QADLLSRIRSAQERDEEIKGWAQNNK----TEYQS 231
Query: 1176 DSEGVLWLKSRICVPNVDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEGMKRDVA 1235
+ G + + R+C PN L+ +IL+EAH S ++IHPGSNKMY+DL+ +Y W GMK+DVA
Sbjct: 232 SNNGTIVVNGRVCGPNDKALKEEILKEAHQSKFSIHPGSNKMYRDLKRYYHWVGMKKDVA 291
Query: 1236 NFVSKCLVCQQVKAEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKG-FDSVWVIID 1294
+V+K EHQ P+G+LQ + IP+WKW+ I MDFVTGLP K ++VWV++D
Sbjct: 292 RWVAK--------EEHQVPSGMLQNLPIPEWKWDHIMMDFVTGLPTGIKSKHNAVWVVVD 343
Query: 1295 RLTKSAHFLPVKTTYTASQYAKIYLEEIVSLHGVPISIISDRGAQFTAQFWKSFQAALGT 1354
RLTKSAHF+ + A A+ Y++EIV LHG+P+SI+SDR +FT++FWK FQ LGT
Sbjct: 344 RLTKSAHFMAISDKDAAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKPFQKVLGT 403
Query: 1355 RLNLSTAFHPQTDGQSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAYNNSYQSSIQMA 1414
R+NLSTA+HPQTDGQSERTIQ LEDMLRACVLD GG+W++YL ++EFAYNNS+Q+SI M+
Sbjct: 404 RVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLVEFAYNNSFQASIGMS 463
Query: 1415 PFEALYGRRCRSPIGWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQKSYSDKRRR 1474
P+EALYGR R+P+ W VGE +L GP ++ + K+K ++ +L AQ RQKSY++KRR+
Sbjct: 464 PYEALYGRAGRTPLCWTPVGERRLFGPAVVDETTKKMKFLKIKLKEAQDRQKSYANKRRK 523
Query: 1475 PLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLALPPDLSRVH 1534
LEF VG+ V+L+ KG RF + KL PR++GP++++ERVG VAY+L LPP L H
Sbjct: 524 ELEFQVGDLVYLKAMTYKGAGRFTSRKKLRPRYVGPYKVIERVGAVAYKLDLPPKLDAFH 583
Query: 1535 PVFHISMLRKYIYDPSHVISHKDVQLDENLSYTEHPVALVDKGVRRLRSKDIVSVKVLWK 1594
VFH+S LRK + + + L EN++ PV ++D+ + R K + +K+LW
Sbjct: 584 NVFHVSQLRKCLSEQEESMEDVPPGLKENMTVEAWPVRIMDQMKKGTRGKSMDLLKILWN 643
Query: 1595 GPSGEETTWEPEETIRGKYPHLFENQG 1621
EE TWE E ++ +P F+ G
Sbjct: 644 CGGREEYTWETETKMKANFPEWFKEMG 670
>At1g35370 hypothetical protein
Length = 1447
Score = 647 bits (1669), Expect = 0.0
Identities = 407/1141 (35%), Positives = 624/1141 (54%), Gaps = 110/1141 (9%)
Query: 493 SVCSQDAHVLFDPGATYSFVSLYFAPRLGKSSSFLDETLVVTTPVGNNVLAKSVYYSCDV 552
+V +D +L D G+T++F+ A +LG T V G +
Sbjct: 374 TVDKRDLFILIDSGSTHNFIDSTVAAKLGCHVESAGLTKVAVAD-GRKLNVDGQIKGFTW 432
Query: 553 SIEGKVLPADLVVLNMVDFDVILGMDWLSLHHATVDCHNKVVKFKPPGEATFSFQGERSW 612
++ +D++++ + D++LG+ WL K+ E F ++ +R W
Sbjct: 433 KLQSTTFQSDILLIPLQGVDMVLGVQWLETLGRISWEFKKL-------EMQFFYKNQRVW 485
Query: 613 VPNNLISSLR---ANKLL-SRGCQGYLALV--RDVQAGEEKL-------------ENVP- 652
+ + S+R A+KL ++ Q LA+V R+V + EE+ E+V
Sbjct: 486 LHGIITGSVRDIKAHKLQKTQADQIQLAMVCVREVVSDEEQEIGSISALTSDVVEESVVQ 545
Query: 653 -IVCEFSDVFPEELPGIPPDREI-EFSIDLIPGTQPISIPPYRMAPAELKELREQLQDLL 710
IV EF DVF E +PP RE + I L+ G P++ PYR + E+ + +QD++
Sbjct: 546 NIVEEFPDVFAEPTD-LPPFREKHDHKIKLLEGANPVNQRPYRYVVHQKDEIDKIVQDMI 604
Query: 711 DKGFIRASTSPWGAPVLFVKKKDGSMRLCVDYRQLNKVTIKNKYPLPRIDELFDQLQGAQ 770
G I+ S+SP+ +PV+ VKKKDG+ RLCVDY +LN +T+K+++ +P I++L D+L G+
Sbjct: 605 KSGTIQVSSSPFASPVVLVKKKDGTWRLCVDYTELNGMTVKDRFLIPLIEDLMDELGGSV 664
Query: 771 CFSKIDLRSGYHQLKIKSEDISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPF 830
FSKIDLR+GYHQ+++ +DI KTAF+T GH+E+LVM FGLTNAPA F LMN VF+ F
Sbjct: 665 VFSKIDLRAGYHQVRMDPDDIQKTAFKTHNGHFEYLVMLFGLTNAPATFQSLMNSVFRDF 724
Query: 831 LDRFVIVFIDDILIYSKSREEHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGHIVS 890
L +FV+VF DDILIYS S EEH++HLRLV + +R +L+AK SK LGH +S
Sbjct: 725 LRKFVLVFFDDILIYSSSIEEHKEHLRLVFEVMRLHKLFAKGSK--------EHLGHFIS 776
Query: 891 KNGISVDPSKVEAVQNWPRPTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKKVEF 950
I DP+K++AV+ WP PT+VK++R FLG AGYYRRFV++F +A PL LT K F
Sbjct: 777 AREIETDPAKIQAVKEWPTPTTVKQVRGFLGFAGYYRRFVRNFGVIAGPLHALT-KTDGF 835
Query: 951 KWTDACEESFQKLKECLISAPILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQ 1010
W+ + +F LK L +AP+LALP ++V DA G+ VLMQ G +AY SRQ
Sbjct: 836 CWSLEAQSAFDTLKAVLCNAPVLALPVFDKQFMVETDACGQGIRAVLMQKGHPLAYISRQ 895
Query: 1011 LKRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWM 1070
LK + + ++ E+ A IFA++ WRHYL I TD +SLKY+ EQR Q++W+
Sbjct: 896 LKGKQLHLSIYEKELLAFIFAVRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPVQQQWL 955
Query: 1071 ELLKDYDCTILYHPGKANVVADALSRKSMGSLAH--LTAIKRPIVKEFQEIVESGVQFEI 1128
L ++D I Y GK N+VADALSR + H L+ ++ +KE Q ES
Sbjct: 956 PKLLEFDYEIQYRQGKENLVADALSRVEGSEVLHMALSIVECDFLKEIQVAYES------ 1009
Query: 1129 DHSRTLLAHMKFRSTLIDDIKQAQSQDSELMKMVDNVRNGKVSNFSVDSEGVLWLKSRIC 1188
++ DI A Q + K ++S S+ +L KS+I
Sbjct: 1010 -------------DGVLKDIISALQQHPDAKK-----------HYSW-SQDILRRKSKIV 1044
Query: 1189 VPNVDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEGMKRDVANFVSKCLVCQQVK 1248
VPN ++ K+L+ H S G + +Q ++ ++W+GM +D+ F+ C CQQ K
Sbjct: 1045 VPNDVEITNKLLQWLHCSGMGGRSGRDASHQRVKSLFYWKGMVKDIQAFIRSCGTCQQCK 1104
Query: 1249 AEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKGFDSVWVIIDRLTKSAHFLPVKTT 1308
+++ GLLQP+ IP W ++MDF+ GLP + G + V++DRL+K+AHF+ +
Sbjct: 1105 SDNAAYPGLLQPLPIPDKIWCDVSMDFIEGLPNSG-GKSVIMVVVDRLSKAAHFVALAHP 1163
Query: 1309 YTASQYAKIYLEEIVSLHGVPISIISDRGAQFTAQFWKSFQAALGTRLNLSTAFHPQTDG 1368
Y+A A+ +L+ + HG P SI+SDR FT+ FWK F G L +S+A+HPQ+DG
Sbjct: 1164 YSALTVAQAFLDNVYKHHGCPTSIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDG 1223
Query: 1369 QSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAYNNSYQSSIQMAPFEALYGRRCRSPI 1428
Q+E + LE+ LR W+++LP+ E+ YN +Y SS QM PFE +YG+ +
Sbjct: 1224 QTEVVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYHSSSQMTPFELVYGQAPPIHL 1283
Query: 1429 GWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQKSYSDKRRRPLEFTVGEHVFLRV 1488
+ V +Q+ + + ++ L+ AQ R K ++D+ R F +G+ V++++
Sbjct: 1284 PYLPGKSKVAVVARSLQERENMLLFLKFHLMRAQHRMKQFADQHRTERTFDIGDFVYVKL 1343
Query: 1489 SPMKG---VLRFGKKGKLTPRFIGPFEILERVGPVAY-RLALPPDLSRVHP-VFHISMLR 1543
P + VLR + KL+P++ GP++I+E+ G V + L V P +F +
Sbjct: 1344 QPYRQQSVVLRVNQ--KLSPKYFGPYKIIEKCGEVMVGNVTTSTQLPSVLPDIFEKA--- 1398
Query: 1544 KYIYDPSHVISHKDVQLDENLSYTEHPVALVDKGVRRLRSKDIVSVKVLWKGPSGEETTW 1603
P +++ K V+ R+ R+ +V VK W G EE TW
Sbjct: 1399 -----PEYILERKLVK-------------------RQGRAATMVLVK--WIGEPVEEATW 1432
Query: 1604 E 1604
+
Sbjct: 1433 K 1433
>At2g07660 putative retroelement pol polyprotein
Length = 949
Score = 620 bits (1600), Expect = e-177
Identities = 303/489 (61%), Positives = 377/489 (76%), Gaps = 3/489 (0%)
Query: 552 VSIEGKVLPADLVVLNMVDFDVILGMDWLSLHHATVDCHNKVVKFKPPGEATFSFQGERS 611
V + G +PADL+++ + DVILGMDWL + +DCH + ++F+ E FQG R+
Sbjct: 21 VVVNGVNMPADLIIVPLKKHDVILGMDWLGKYKGHIDCHRERIQFERD-EGMLKFQGIRT 79
Query: 612 WVPNNLISSLRANKLLSRGCQGYLALVRDVQAGEE-KLENVPIVCEFSDVFPEELPGIPP 670
+ +IS+++A ++L +GC+ YLA + + G +L+++ IV EFSDVF + G+PP
Sbjct: 80 TSGSLVISAIQAERMLGKGCEAYLATITTKEVGASAELKDILIVNEFSDVFAA-VSGVPP 138
Query: 671 DREIEFSIDLIPGTQPISIPPYRMAPAELKELREQLQDLLDKGFIRASTSPWGAPVLFVK 730
DR F+I+L PGT PIS PYRMAPAE+ EL++QL++LL KGFIR S+SPWGAPVLFVK
Sbjct: 139 DRSDPFTIELEPGTTPISKAPYRMAPAEMAELKKQLEELLAKGFIRPSSSPWGAPVLFVK 198
Query: 731 KKDGSMRLCVDYRQLNKVTIKNKYPLPRIDELFDQLQGAQCFSKIDLRSGYHQLKIKSED 790
KKDGS RLC+DYR LNKVT+KNKYPLPRIDEL DQL GAQ FSKIDL SGYHQ+ I+ D
Sbjct: 199 KKDGSFRLCIDYRGLNKVTVKNKYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTD 258
Query: 791 ISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILIYSKSRE 850
+ KTAFRTRYGH+EF+VM FGLTNAPAAFM +MN VF+ FLD FVI+FIDDIL++SKS E
Sbjct: 259 VRKTAFRTRYGHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIFIDDILVHSKSWE 318
Query: 851 EHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGHIVSKNGISVDPSKVEAVQNWPRP 910
H++HLR VL+ LRE +L+AK SK FW SV FLGH++S G+SVDP K+ +++ WPRP
Sbjct: 319 AHQEHLRAVLERLREHELFAKLSKFSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRP 378
Query: 911 TSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLKECLISA 970
+ EIRSFLGLAGYYRRFV F+ +A PLTRLT K F W+D CE+SF +LK LI+A
Sbjct: 379 RNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLINA 438
Query: 971 PILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVIF 1030
P+L LP G Y VY DAS VGLGCVLMQ G VIAYASRQL++HE+NYPTHDLEMAAV+F
Sbjct: 439 PVLVLPEEGEPYTVYTDASIVGLGCVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVF 498
Query: 1031 ALKIWRHYL 1039
ALKIWR YL
Sbjct: 499 ALKIWRSYL 507
Score = 475 bits (1222), Expect = e-133
Identities = 227/446 (50%), Positives = 318/446 (70%), Gaps = 5/446 (1%)
Query: 1148 IKQAQSQDSELMKMVDNVRNGKVSNFSVDSEGVLWLKSRICVPNVDDLRRKILEEAHHSS 1207
I+ AQ +D E+ N + + + + G + + R+CVPN L+ +IL EAH S
Sbjct: 508 IRLAQERDEEIKGWTLNNK----TEYQTSNNGTIVVNGRVCVPNDRALKEEILREAHQSK 563
Query: 1208 YTIHPGSNKMYQDLREFYWWEGMKRDVANFVSKCLVCQQVKAEHQKPAGLLQPIEIPKWK 1267
++IHPGSNKMY+DL+ +Y W GM++DVA +V+KC CQ VKAEHQ P+GLLQ + I +WK
Sbjct: 564 FSIHPGSNKMYRDLKRYYHWVGMRKDVARWVAKCPTCQLVKAEHQVPSGLLQNLPISEWK 623
Query: 1268 WEGIAMDFVTGLPRTQKG-FDSVWVIIDRLTKSAHFLPVKTTYTASQYAKIYLEEIVSLH 1326
W+ I MDFVT LP K ++VWV++DRLTKSAHF+ + A A+ Y++EI+ LH
Sbjct: 624 WDHITMDFVTRLPTGIKSKHNAVWVVVDRLTKSAHFMAISDKDGAEIIAEKYIDEIMRLH 683
Query: 1327 GVPISIISDRGAQFTAQFWKSFQAALGTRLNLSTAFHPQTDGQSERTIQILEDMLRACVL 1386
G+P+SI+SDR +FT++FW +FQ ALGTR+NLSTA+HPQTDGQSERTIQ LEDMLRACVL
Sbjct: 684 GIPVSIVSDRDTRFTSKFWNAFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVL 743
Query: 1387 DLGGSWDRYLPMMEFAYNNSYQSSIQMAPFEALYGRRCRSPIGWFEVGEAKLVGPELIQD 1446
D GG+W++YL ++EFAYNNS+Q+SI M+P+EALYGR CR+P+ W VGE +L GP ++ +
Sbjct: 744 DWGGNWEKYLRLIEFAYNNSFQASIGMSPYEALYGRACRTPLCWTPVGERRLFGPTIVDE 803
Query: 1447 AIDKVKLIRDRLVTAQSRQKSYSDKRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPR 1506
+++K ++ +L AQ RQKSY++KRR+ LEF VG+ V+L+ KG RF + KL+PR
Sbjct: 804 TTERMKFLKIKLKEAQDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPR 863
Query: 1507 FIGPFEILERVGPVAYRLALPPDLSRVHPVFHISMLRKYIYDPSHVISHKDVQLDENLSY 1566
++GP++++ERVG VAY+L LPP L+ H VFH+S LRKY+ D + L EN++
Sbjct: 864 YVGPYKVIERVGAVAYKLDLPPKLNVFHNVFHVSQLRKYLSDQEESVEDIPPGLKENMTV 923
Query: 1567 TEHPVALVDKGVRRLRSKDIVSVKVL 1592
PV ++D+ + R K +KVL
Sbjct: 924 EAWPVRIMDRMSKGTRGKSRDLLKVL 949
>At4g07830 putative reverse transcriptase
Length = 611
Score = 537 bits (1383), Expect = e-152
Identities = 287/623 (46%), Positives = 392/623 (62%), Gaps = 51/623 (8%)
Query: 998 MQHGKVIAYASRQLKRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTDHKSLKYIF 1057
MQ GKVIAY SRQLK+HE NYPTHDLEMAAV +TDHKSLKYIF
Sbjct: 1 MQRGKVIAYGSRQLKKHEGNYPTHDLEMAAV------------------FTDHKSLKYIF 42
Query: 1058 EQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHLTAIKRPIVKEFQ 1117
Q +LNLR RRWM+L+ DYD I YHPGKANVV DALSRK +G+ + +V E
Sbjct: 43 TQLELNLRLRRWMKLVADYDLEIAYHPGKANVVTDALSRKRVGAAPGQSV--ETLVIEIG 100
Query: 1118 EIVESGVQFEIDHSRTLLAHMKFRSTLIDDIKQAQSQDSELMKMVDNVRNGKVSNFSVDS 1177
+ V E L ++ L+ ++ AQ +D L+ + + +
Sbjct: 101 ALRLCAVARE-----PLGLEAVDQTDLLSRVQLAQEKDEGLIA----ASKAEGFEYQFAA 151
Query: 1178 EGVLWLKSRICVPNVDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEGMKRDVANF 1237
G + + R+CVP +LR++IL EAH S ++IHPG+ KMY+DL+ +Y W GMKRDV N+
Sbjct: 152 NGTILVHGRVCVPKDKELRQEILSEAHASMFSIHPGATKMYRDLKRYYQWVGMKRDVGNW 211
Query: 1238 VSKCLVCQQVKAEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKGFDSVWVIIDRLT 1297
V +C VCQ VK EHQ LLQ + IP+WKW+ I MDFV GLP + D++WVI+DRLT
Sbjct: 212 VEECDVCQLVKIEHQVSGSLLQSLPIPEWKWDFITMDFVVGLP-VSRTKDAIWVIVDRLT 270
Query: 1298 KSAHFLPVKTTYTASQYAKIYLEEIVSLHGVPISIISDRGAQFTAQFWKSFQAALGTRLN 1357
KSAHFL ++ T A+ AK Y+ EIV LHGVP+SI+SDR ++FT+ FW++FQA +GT++
Sbjct: 271 KSAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQAEMGTKVQ 330
Query: 1358 LSTAFHPQTDGQSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAYNNSYQSSIQMAPFE 1417
+STA+HPQTDGQSERTIQ LEDMLR CVLD G W +L ++EFAYNNSYQ+SI MAPFE
Sbjct: 331 MSTAYHPQTDGQSERTIQTLEDMLRMCVLDWRGHWADHLSLVEFAYNNSYQASIGMAPFE 390
Query: 1418 ALYGRRCRSPIGWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQKSYSDKRRRPLE 1477
LYGR CR+ + W +VGE + G + +Q+ +++++++ + AQ+RQ+SY+DKRR+ LE
Sbjct: 391 VLYGRPCRT-LCWTQVGERSIYGADYVQEITERIRVLKLNMKEAQNRQRSYADKRRKELE 449
Query: 1478 FTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLALPPDLSRVHPVF 1537
F VG+ V + G + +RVGPVA+RL L + H VF
Sbjct: 450 FEVGDSV-------------SQDGHVA-------RSEQRVGPVAFRLELSDVMRAFHKVF 489
Query: 1538 HISMLRKYIYDPSHVISHKDVQLDENLSYTEHPVALVDKGVRRLRSKDIVSVKVLWKGPS 1597
H+SMLRK ++ V++ L N++ PV ++++ ++ LR K I +KVL
Sbjct: 490 HVSMLRKCLHKDDEVLAKIPEDLQPNMTLEARPVRVLERRIKELRRKKIPLIKVLRNCDG 549
Query: 1598 GEETTWEPEETIRGKYPHLFENQ 1620
E TWEPE ++ ++ FE +
Sbjct: 550 VTEETWEPEARLKARFKKWFEKK 572
>At1g36120 putative reverse transcriptase gb|AAD22339.1
Length = 1235
Score = 525 bits (1353), Expect = e-149
Identities = 293/690 (42%), Positives = 392/690 (56%), Gaps = 148/690 (21%)
Query: 931 KDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLKECLISAPILALPTSGGGYVVYCDASR 990
K F+ +A P+T+LT+K + F W+ CEE F+
Sbjct: 691 KGFASMAQPMTKLTEKDIPFVWSPECEEGFR----------------------------- 721
Query: 991 VGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTDH 1050
GKVI YASRQL++HE NYPTHDLEMAA+IFALKIW YLYG +++TDH
Sbjct: 722 ----------GKVIVYASRQLRKHEGNYPTHDLEMAAIIFALKIWGSYLYGGKVQVFTDH 771
Query: 1051 KSLKYIFEQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHLTAIKR 1110
KSLK IF Q +LNLRQRRWMEL+ DYD I YHPGK NVVADALSRK +G+
Sbjct: 772 KSLKDIFTQPELNLRQRRWMELVADYDLEIAYHPGKTNVVADALSRKRVGAAPG------ 825
Query: 1111 PIVKEFQEIVESGVQFEIDHSRTLLAHMKFRSTLIDDIKQAQSQDSELMKMVDNVRNGKV 1170
+ VE+ V EI R + +++ ++ VD NG +
Sbjct: 826 -------QSVEALVS-EIGALRLCVV----------------AREPLKLEAVDRAANGTI 861
Query: 1171 SNFSVDSEGVLWLKSRICVPNVDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEGM 1230
+ R+C+P ++LRR+IL EAH S ++IHPG+ KMY+DL+ Y W GM
Sbjct: 862 L-----------VHERVCLPKDEELRREILSEAHASMFSIHPGATKMYRDLKRHYQWVGM 910
Query: 1231 KRDVANFVSKCLVCQQVKAEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKGFDSVW 1290
KRDVAN+V++C VCQ VKAEHQ P GLLQ + I +WK
Sbjct: 911 KRDVANWVTECDVCQLVKAEHQVPGGLLQSLPISEWK----------------------- 947
Query: 1291 VIIDRLTKSAHFLPVKTTYTASQYAKIYLEEIVSLHGVPISIISDRGAQFTAQFWKSFQA 1350
T A LP K Y+ EIV LHGVP+SI+S R ++FT+ FW++FQ
Sbjct: 948 -----KTDGAAVLPKK-----------YVSEIVKLHGVPVSILSHRDSKFTSAFWRAFQV 991
Query: 1351 ALGTRLNLSTAFHPQTDGQSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAYNNSYQSS 1410
+GT++ +STA+HPQTDGQSERTIQ LEDML+ CVLD GG W +L +++FAYNNSYQ+S
Sbjct: 992 EMGTKVQMSTAYHPQTDGQSERTIQTLEDMLQMCVLDWGGHWADHLSLVKFAYNNSYQAS 1051
Query: 1411 IQMAPFEALYGRRCRSPIGWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQKSYSD 1470
I MAPFEALYGR CR+ + W +VGE + G + +Q+ +++++++ + AQ RQ+SY+D
Sbjct: 1052 IGMAPFEALYGRPCRTLLCWTQVGEKSIYGADYVQETTERIRVLKLNMKEAQDRQRSYAD 1111
Query: 1471 KRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLALPPDL 1530
KRRR LEF VG EI+ERVGPVAYRL LP +
Sbjct: 1112 KRRRELEFEVGT-----------------------------EIVERVGPVAYRLELPDVM 1142
Query: 1531 SRVHPVFHISMLRKYIYDPSHVISHKDVQLDENLSYTEHPVALVDKGVRRLRSKDIVSVK 1590
H VFH+SMLRK ++ V++ L N++ PV ++++ ++ +R K I +K
Sbjct: 1143 RAFHNVFHVSMLRKCLHKDDEVLAKIPEDLQPNMTLEARPVRVLERRIKEVRRKKIPMIK 1202
Query: 1591 VLWKGPSGEETTWEPEETIRGKYPHLFENQ 1620
VLW E TWEPE I+ ++ FE Q
Sbjct: 1203 VLWDCDGVTEETWEPEARIKARFKKWFEKQ 1232
Score = 314 bits (804), Expect = 3e-85
Identities = 185/415 (44%), Positives = 242/415 (57%), Gaps = 35/415 (8%)
Query: 447 GSGASQHGGRGPGGRGQSQVGRGHARVFALTRQDAQASNAVVTGTLSVCSQD-------A 499
GS A GG QS G AR A + A + +GT + D
Sbjct: 297 GSAADDSSTSTAGGAAQSA---GAARSAA----ECAAVSTYCSGTTWLYYADLISGRCRG 349
Query: 500 HVLFDPGATYSFVSLYFAPRLGKSSSFLDETLVVTTPVGNNVLAKSVYYSCDVSIEGKVL 559
HVLFD GA++ F++ A R ++ V G + ++ IE + +
Sbjct: 350 HVLFDSGASHCFITPESASRDNIRGEPGEQFGAVKIAGGQFLTVLGRAKGVNIQIEEESM 409
Query: 560 PADLVVLNMVDFDVILGMDWLSLHHATVDCHNKVVKFKPPGEATFSFQGERSWVPNNLIS 619
PADL++ +V +D ILGMDWL + +DCH V F+ P E +QG R + +IS
Sbjct: 410 PADLIINPVVLYDAILGMDWLDHYRVHLDCHRGRVSFERP-EGRLVYQGVRPTSRSLVIS 468
Query: 620 SLRANKLLSRGCQGYLALVRDVQA-GEEKLENVPIVCEFSDVFPEELPGIPPDREIEFSI 678
++ K++ +GC+ YL + ++ G+ + ++ +V EF DVF + L G+PP R F+I
Sbjct: 469 EVQVEKMIEKGCEAYLVTISMSESVGQVAVSDIWVVQEFEDVF-QSLQGLPPSRSDPFTI 527
Query: 679 DLIPGTQPISIPPYRMAPAELKELREQLQDLLDKGFIRASTSPWGAPVLFVKKKDGSMRL 738
+L GT P+S PYRM PAE+ EL++QL+DLL KGFIR STS WGAP
Sbjct: 528 ELELGTAPLSKTPYRMVPAEIAELKKQLEDLLGKGFIRPSTSRWGAP------------- 574
Query: 739 CVDYRQLNKVTIKNKYPLPRIDELFDQLQGAQCFSKIDLRSGYHQLKIKSEDISKTAFRT 798
LN+VT+KNKYPLPRIDEL DQL+GA CFSKIDL GYHQ I D+ KTAFRT
Sbjct: 575 -----GLNRVTLKNKYPLPRIDELLDQLRGATCFSKIDLTPGYHQFPIAEADVRKTAFRT 629
Query: 799 RYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILIYSKSREEHE 853
RYGH+EF+VM FGLTNAP A M LMN VF+ FLD FVI+FIDDIL+Y KS EEHE
Sbjct: 630 RYGHFEFVVMPFGLTNAPTALMRLMNSVFQEFLDEFVIIFIDDILVYFKSPEEHE 684
>At2g06890 putative retroelement integrase
Length = 1215
Score = 478 bits (1231), Expect = e-135
Identities = 267/648 (41%), Positives = 378/648 (58%), Gaps = 72/648 (11%)
Query: 649 ENVPIVCEFSDVFPEELP-GIPPDREIEFSIDLIPGTQPISIPPYRMAPAELKELREQLQ 707
E ++ ++ DVFPE+ P G+PP R IE ID +PG + P YR P E KEL+ Q
Sbjct: 407 EMTSLLQDYKDVFPEDNPKGLPPIRGIEHQIDFVPGASLPNRPAYRTNPVETKELQRQ-- 464
Query: 708 DLLDKGFIRASTSPWGAPVLFVKKKDGSMRLCVDYRQLNKVTIKNKYPLPRIDELFDQLQ 767
KDGS R+C D R +N VT+K +P+PR+D++ D+L
Sbjct: 465 ------------------------KDGSWRMCFDCRAINNVTVKYCHPIPRLDDMLDELH 500
Query: 768 GAQCFSKIDLRSGYHQLKIKSEDISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVF 827
G+ FSKIDL+SGYHQ+++ D KTAF+T++G YE+LVM FGLT+AP+ FM LMN V
Sbjct: 501 GSSIFSKIDLKSGYHQIRMNEGDEWKTAFKTKHGLYEWLVMPFGLTHAPSTFMRLMNHVL 560
Query: 828 KPFLDRFVIVFIDDILIYSKSREEHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGH 887
+ F+ FVIV+ DDIL+YS+S EH +HL VL LR+++LYA KC F +++ FLG
Sbjct: 561 RAFIGIFVIVYFDDILVYSESLREHIEHLDSVLNVLRKEELYANLKKCTFCTDNLVFLGF 620
Query: 888 IVSKNGISVDPSKVEAVQNWPRPTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKK 947
+VS +G+ VD KV+A+++WP P +V E+RSF GLAG+YRRF KDFS + PLT + +K
Sbjct: 621 VVSADGVKVDEEKVKAIRDWPSPKTVGEVRSFHGLAGFYRRFFKDFSTIVAPLTEVMKKD 680
Query: 948 VEFKWTDACEESFQKLKECLISAPILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYA 1007
V FKW A EE+FQ LK+ L +AP+L L + + CDAS +G+G VLMQ K+IA+
Sbjct: 681 VGFKWEKAQEEAFQSLKDKLTNAPVLILSEFLKTFEIECDASGIGIGAVLMQDQKLIAFF 740
Query: 1008 SRQLKRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQR 1067
S +L NYPT+D E+ A++ AL+ W+HYL+ + I+TDH+SLK++ Q+ LN R
Sbjct: 741 SEKLGGATLNYPTYDKELYALVRALQRWQHYLWPKVFVIHTDHESLKHLKGQQKLNKRHA 800
Query: 1068 RWMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHLTAIKRPIVKEFQEIVESGVQFE 1127
RW+E ++ + I Y GK NVVADALS++
Sbjct: 801 RWVEFIETFAYVIKYKKGKDNVVADALSQR------------------------------ 830
Query: 1128 IDHSRTLLAHMKFRSTLIDDIKQAQSQD---SELMKMVDNVRNGKVSNFSVDSEGVLWLK 1184
TLL+ + + + IK+ D E+ K + +G+ + L+ +
Sbjct: 831 ----YTLLSTLNVKLMGFEQIKEVYETDHDFQEVYKACEKFASGRYFR----QDKFLFYE 882
Query: 1185 SRICVPNVDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEGMKRDVANFVSKCLVC 1244
+R+CVPN LR + EAH H G K + + E + W MK DV +C C
Sbjct: 883 NRLCVPNC-SLRDLFVREAHGGGLMGHFGIAKTLEVMTEHFRWPHMKCDVKRICGRCNTC 941
Query: 1245 QQVKAEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKGFDSVWVI 1292
+Q K++ Q P GL P+ IPK W I+MDFV GLPRT G DS++V+
Sbjct: 942 KQAKSKIQ-PNGLYTPLPIPKHPWNDISMDFVMGLPRT--GKDSIFVV 986
Score = 42.0 bits (97), Expect = 0.003
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 1414 APFEALYGRRCRSPIGWFEVGEAKLVG------PELIQDAIDKVKLIRDRLVTAQSRQKS 1467
+PF+ +YG SP + ++ V EL+Q + + + ++Q
Sbjct: 988 SPFQIVYGFNPISPFDLIPLPLSERVSIDGKKKAELVQQIHENARRNIEEKTKLYAKQ-- 1045
Query: 1468 YSDKRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLAL- 1526
++K RR F VG+ V++ + + + +K KL PR GPF+I++R+ AY+L L
Sbjct: 1046 -ANKGRREQIFEVGDMVWIHLRKERFPAQ--RKSKLMPRIDGPFKIIKRINDNAYQLDLQ 1102
Query: 1527 -PPDL 1530
PDL
Sbjct: 1103 DEPDL 1107
>At2g05610 putative retroelement pol polyprotein
Length = 780
Score = 476 bits (1226), Expect = e-134
Identities = 271/695 (38%), Positives = 393/695 (55%), Gaps = 93/695 (13%)
Query: 644 GEEKLENVPIVCEFSDVFPEELPGIPPDREI-EFSIDLIPGTQPISIPPYRMAPAELKEL 702
GEE +V EF D+F E +PP R + I+L+ + P++ PYR + E+
Sbjct: 2 GEESFVE-KVVTEFPDIFVEPTD-LPPFRAPHDHKIELLEDSNPVNQRPYRYVVHQKNEI 59
Query: 703 REQLQDLLDKGFIRASTSPWGAPVLFVKKKDGSMRLCVDYRQLNKVTIKNKYPLPRIDEL 762
+ + D+L G I+AS+SP+ +PV+ VKKKDG+ RLCVDYR+LN +T+K+++P+P I++L
Sbjct: 60 DKIVDDMLASGTIQASSSPYASPVVLVKKKDGTWRLCVDYRELNGMTVKDRFPIPLIEDL 119
Query: 763 FDQLQGAQCFSKIDLRSGYHQLKIKSEDISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDL 822
D+L G+ +SKIDLR+GYHQ+++ DI KTAF+T GHYE+LVM FGLTNAPA+F L
Sbjct: 120 MDELGGSNVYSKIDLRAGYHQVRMDPLDIHKTAFKTHNGHYEYLVMPFGLTNAPASFQSL 179
Query: 823 MNRVFKPFLDRFVIVFIDDILIYSKSREEHEQHLRLVLQTLREKQLYAKFSKCEFWLESV 882
MN FKPFL +FV+VF DDILIYS S EEH++HL V + +R L+AK SKC F + V
Sbjct: 180 MNSFFKPFLRKFVLVFFDDILIYSTSMEEHKKHLEAVFEVMRVHHLFAKMSKCAFAVPRV 239
Query: 883 AFLGHIVSKNGISVDPSKVEAVQNWPRPTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTR 942
+LGH +S GI+ DP+K++AVQ+WP P ++K++ FLGL GYYRRF
Sbjct: 240 EYLGHFISGEGIATDPAKIKAVQDWPVPVNLKQLCGFLGLTGYYRRF------------- 286
Query: 943 LTQKKVEFKWTDACEESFQKLKECLISAPILALPTSGGGYVVYCDASRVGLGCVLMQHGK 1002
+VV DA G+G VLMQ G
Sbjct: 287 ---------------------------------------FVVEMDACGHGIGAVLMQEGH 307
Query: 1003 VIAYASRQLKRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFEQRDL 1062
+A+ SRQLK + + ++ E+ AVIF ++ WRHYL I TD +SLKY+ EQR
Sbjct: 308 PLAFISRQLKGKQLHLSIYEKELLAVIFVVRKWRHYLISSHFIIKTDQRSLKYLLEQRLN 367
Query: 1063 NLRQRRWMELLKDYDCTILYHPGKANVVADALSRKSMGSLAH--LTAIKRPIVKEFQE-- 1118
Q++W+ L ++D I Y GK N+VADALSR + H L+ ++ ++KE Q
Sbjct: 368 TPIQQQWLPKLLEFDYEIQYKQGKENLVADALSRVEGSEVLHMALSVVECDLLKEIQAGY 427
Query: 1119 IVESGVQFEIDHSRTLLAHMKFRSTLIDDIKQAQSQDSELMKMVDNVRNGKVSNFSVDSE 1178
+ + +Q I T+L +QA S+ S+
Sbjct: 428 VTDGDIQGII----TILQ------------QQADSKKHYTW-----------------SQ 454
Query: 1179 GVLWLKSRICVPNVDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEGMKRDVANFV 1238
GVL K++I VPN ++ IL H S H G +Q ++ ++W+ M +D+ F+
Sbjct: 455 GVLRRKNKIVVPNNSGIKDTILRWLHCSGMGGHSGKEVTHQRVKGLFYWKSMVKDIQAFI 514
Query: 1239 SKCLVCQQVKAEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKGFDSVWVIIDRLTK 1298
C CQQ K+++ GLLQP+ IP W ++MDF+ GLP G + V++DRL+K
Sbjct: 515 RSCGTCQQCKSDNAASPGLLQPLPIPDRIWSDVSMDFIDGLP-LSNGKTVIMVVVDRLSK 573
Query: 1299 SAHFLPVKTTYTASQYAKIYLEEIVSLHGVPISII 1333
+AHF+ + Y+A A+ YL+ + LHG P SI+
Sbjct: 574 AAHFIALAHPYSAMTVAQAYLDNVFKLHGCPSSIV 608
Score = 84.3 bits (207), Expect = 5e-16
Identities = 54/159 (33%), Positives = 94/159 (58%), Gaps = 11/159 (6%)
Query: 1413 MAPFEALYGRRCRSPIGWFEVGEAKL-VGPELIQDAIDKVKLIRDRLVTAQSRQKSYSDK 1471
M P+EA+YG+ + + GE+K+ V +Q+ + ++ L+ AQ R K +D+
Sbjct: 625 MTPYEAVYGQPPPLHLPYLP-GESKVAVVARSMQERESMILFLKFHLMRAQHRMKQLADQ 683
Query: 1472 RRRPLEFTVGEHVFLRVSPMKG---VLRFGKKGKLTPRFIGPFEILERVGPVAYRLALPP 1528
EF VG++VF+++ P + V+R +K L+P++ GP+++++R G VAY+L LP
Sbjct: 684 HITEREFEVGDYVFVKLQPYRQQSVVMRSTQK--LSPKYFGPYKVIDRCGEVAYKLQLPA 741
Query: 1529 DLSRVHPVFHISMLRKY---IYDPSHVISHKDVQLDENL 1564
+ S+VHPVFH+S LR + +H++ + L ENL
Sbjct: 742 N-SQVHPVFHVSQLRVLVGTVTTSTHLLRCYLMSLRENL 779
>At4g03650 putative reverse transcriptase
Length = 839
Score = 435 bits (1119), Expect = e-122
Identities = 206/294 (70%), Positives = 239/294 (81%)
Query: 790 DISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILIYSKSR 849
D+ KTAFRTRYGH+EF+VM FGLTNAPAAFM LMN VF+ FLD FVI+FIDDIL+YSKS
Sbjct: 520 DVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVYSKSP 579
Query: 850 EEHEQHLRLVLQTLREKQLYAKFSKCEFWLESVAFLGHIVSKNGISVDPSKVEAVQNWPR 909
EEHE HLR V++ LRE++L+AK SKC FW + FLGHIVS G+SVDP K+EA+++WPR
Sbjct: 580 EEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEAIRDWPR 639
Query: 910 PTSVKEIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLKECLIS 969
PT+ EIRSFLGLAGYYRRF+K F+ +A P+T+LT K V F W+ CEE F LKE L S
Sbjct: 640 PTNATEIRSFLGLAGYYRRFIKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSLKEMLTS 699
Query: 970 APILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVI 1029
P+LALP G Y+VY DAS VGLGC LMQ GKVIAYASRQL++HE NYPTHDLEMAAVI
Sbjct: 700 TPVLALPEHGEPYMVYTDASGVGLGCALMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVI 759
Query: 1030 FALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWMELLKDYDCTILYH 1083
FALKIWR YLYG +++TDHKSLKYIF Q +LNLRQRRWMEL+ DYD I YH
Sbjct: 760 FALKIWRSYLYGGKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYH 813
Score = 102 bits (253), Expect = 2e-21
Identities = 63/169 (37%), Positives = 95/169 (55%), Gaps = 25/169 (14%)
Query: 551 DVSIEGKVLPADLVVLNMVDFDVILGMDWLSLHHATVDCHNKVVKFKPPGEATFSFQGER 610
D+ I G+ LPADL++ ++ +DVILGMDWL + +DCH V F+ P E + + +R
Sbjct: 376 DIQIAGESLPADLIISHVELYDVILGMDWLDHYRVHLDCHRGRVSFERP-EGSAGRENDR 434
Query: 611 SWVPNNLISSLRANKLLSRGCQGYLALVRDVQAG---EEKLENVPIVCEFSDVFPEELPG 667
+ RG G D+ AG + + ++ +V EF VF + L G
Sbjct: 435 EGL---------------RGLPG-----DDIYAGVCGQVAVSDIRVVQEFQYVF-QSLQG 473
Query: 668 IPPDREIEFSIDLIPGTQPISIPPYRMAPAELKELREQLQDLLDKGFIR 716
+PP R F+I+L P T P+S PYRMAPA++ EL++QL+DLL + +R
Sbjct: 474 LPPSRSDPFTIELEPKTAPLSKAPYRMAPAKMAELKKQLEDLLAEADVR 522
Score = 76.6 bits (187), Expect = 1e-13
Identities = 77/284 (27%), Positives = 128/284 (44%), Gaps = 19/284 (6%)
Query: 34 GGRGVNVRGRGVNAGRHAFDEELFDVEVPRRRRGNPVVENANLQGL-QQVVQQLVEIVAG 92
G GV G GV G HA E V G V GL +Q++++L +V
Sbjct: 60 GAAGVGAGGAGVGTGVHAVGAE--GPGVMGAAAGGAQVPEVGFAGLFRQLLERLPGVVP- 116
Query: 93 QQQGNQTHENLEGQQEVRQVDQVVVAPTRGIEVTLAEFLKLKPPTFSGSSVSEDPQRFID 152
Q +E QQ ++V + + ++ FSG + E+ +
Sbjct: 117 -VQAPVAPRVVEVQQRAAVAEEVP-----SYLRMMKQLQRIGTEYFSGGTSPEEADSWRS 170
Query: 153 GLERLWRALGCSDVRAVELTSYQLEGVAHDWFDTVTHGRQMGSSPMAWKEFSKLFMARFL 212
+ER + + C V+LT + LEG AH W+ +VT R+ + M+W +F F A++
Sbjct: 171 QVERNFGSSRCPAEYRVDLTVHFLEGDAHLWWRSVTARRR--QADMSWADFMAEFNAKYF 228
Query: 213 PQSVRDQLAHEFEIFEQTEGM-SVSEYSARFTQLSRYAAYCVTEEM-RIKKFIRGLREYI 270
P+ D++ E E T+G+ SV EY +F +L YA + ++ ++++F+RGLR +
Sbjct: 229 PREALDRM--EARFLELTQGVRSVREYDRKFNRLLVYAGRGMEDDQAQMRRFLRGLRPNL 286
Query: 271 FRSVVGSNCQTFADVLSLALQIE---QRQKDKGGTRQDPRKKQR 311
S T A ++ A ++E QRQ P+K Q+
Sbjct: 287 RVRCRVSQYATKAALVETAAEVEEDLQRQVVGVSPAVQPKKTQQ 330
Score = 42.4 bits (98), Expect = 0.002
Identities = 17/25 (68%), Positives = 22/25 (88%)
Query: 1350 AALGTRLNLSTAFHPQTDGQSERTI 1374
A +GT++ +ST +HPQTDGQSERTI
Sbjct: 815 AEMGTKVQMSTTYHPQTDGQSERTI 839
>At2g06470 putative retroelement pol polyprotein
Length = 899
Score = 341 bits (875), Expect = 2e-93
Identities = 174/324 (53%), Positives = 222/324 (67%), Gaps = 9/324 (2%)
Query: 952 WTDACEESFQKLKECLISAPILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQL 1011
W +CE+SF +LK L +AP+L LP G Y VY DAS VGLGCVLMQ G VIAYASRQL
Sbjct: 375 WQRSCEKSFLELKAMLTNAPVLVLPEEGEPYTVYTDASIVGLGCVLMQKGSVIAYASRQL 434
Query: 1012 KRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWME 1071
+HE+NYPTHDLEMAAV+FALKIWR YLYG +IYTDHKSLKYIF Q +LNLRQRRWME
Sbjct: 435 WKHEKNYPTHDLEMAAVVFALKIWRSYLYGAKVQIYTDHKSLKYIFIQPELNLRQRRWME 494
Query: 1072 LLKDYDCTILYHPGKANVVADALSRKSMGSLAHLTAIKRPIVKEFQEIVESGVQFEIDHS 1131
L+ DYD I YHPGKAN VADALSR+ A + + +V + + + E++
Sbjct: 495 LVADYDLDIAYHPGKANQVADALSRRRSEVEAERSQV--DLVNMMGTLHVNALSKEVE-- 550
Query: 1132 RTLLAHMKFRSTLIDDIKQAQSQDSELMKMVDNVRNGKVSNFSVDSEGVLWLKSRICVPN 1191
+L ++ L+ I+ AQ +D E+ N + + + + G + + R+CVPN
Sbjct: 551 -SLGLGAADQADLLSRIRLAQERDEEIKGWALNNK----TEYQTSNNGTIVVNGRVCVPN 605
Query: 1192 VDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEGMKRDVANFVSKCLVCQQVKAEH 1251
L+ +IL EAH S ++IHPGSNKMY+DL+ +Y W GMK+DVA +V+KC CQ VKAEH
Sbjct: 606 DRALKEEILREAHQSKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEH 665
Query: 1252 QKPAGLLQPIEIPKWKWEGIAMDF 1275
Q P+GLLQ + IP+WKW+ I MDF
Sbjct: 666 QVPSGLLQNLPIPEWKWDHITMDF 689
Score = 226 bits (577), Expect = 6e-59
Identities = 111/229 (48%), Positives = 153/229 (66%), Gaps = 19/229 (8%)
Query: 1347 SFQAALGTRLNLSTAFHPQTDGQSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAYNNS 1406
+FQ ALGTR+NLSTA+HPQTDGQSERTIQ LEDMLRACVLD GG+W++YL +
Sbjct: 690 AFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLTL-------- 741
Query: 1407 YQSSIQMAPFEALYGRRCRSPIGWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQK 1466
ALYGR CR+P+ W VGE +L GP ++ + +++K ++ +L A RQK
Sbjct: 742 -----------ALYGRACRTPLCWTPVGERRLFGPTIVDETTERMKFLKIKLKEAHDRQK 790
Query: 1467 SYSDKRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLAL 1526
SY++KRR+ LEF VG+ V+L+ KG RF + KL+PR++GP++++ERVG VAY+L L
Sbjct: 791 SYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIERVGAVAYKLDL 850
Query: 1527 PPDLSRVHPVFHISMLRKYIYDPSHVISHKDVQLDENLSYTEHPVALVD 1575
PP L+ H VFH+S LRK + D + L EN++ PV ++D
Sbjct: 851 PPKLNAFHNVFHVSQLRKCLSDQEESVEDVPPGLKENMTVEAWPVRIMD 899
Score = 142 bits (358), Expect = 2e-33
Identities = 65/96 (67%), Positives = 79/96 (81%)
Query: 786 IKSEDISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILIY 845
++ D+ KTAFRTRYGH+EF+VM FGLTNAPAAFM +MN VF+ FLD FVI+FIDDIL+Y
Sbjct: 283 LEPTDVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIFIDDILVY 342
Query: 846 SKSREEHEQHLRLVLQTLREKQLYAKFSKCEFWLES 881
SKS E H++HLR VL+ LRE +L+AK SKC FW S
Sbjct: 343 SKSWEAHQEHLRAVLERLREHELFAKLSKCSFWQRS 378
Score = 43.5 bits (101), Expect = 0.001
Identities = 49/214 (22%), Positives = 91/214 (41%), Gaps = 13/214 (6%)
Query: 44 GVNAGRHAFDEELFDVEVPR----RRRGNPVVENA--NLQGLQQVVQQLVEIVAGQQQGN 97
G AG+ + +EE + R R P + ++G+ + L + V
Sbjct: 45 GPEAGKKSINEEAPESSGARDNTDNRNNTPTAQEQWDLMKGVMAQLATLTKAVVADPVVQ 104
Query: 98 QTHENLEGQQEVRQVD-QVVVAPTRGIEVTLAEFL-KLKPPTFSGSSVSEDPQRFIDGLE 155
+ + EV +V+ Q RG ++L E + +L F GS+ + L+
Sbjct: 105 RVDNQKDDDSEVVEVNPQPNHGRKRGDYLSLLEHVSRLGTRHFMGSTDPIVADEWRSRLK 164
Query: 156 RLWRALGCSDVRAVELTSYQLEGVAHDWFDTVTHGRQMGSSPMAWKEFSKLFMARFLPQS 215
R +++ C + ++ + LEG AH+W+ TV ++ G ++ +F F ++ P
Sbjct: 165 RNFKSTRCPEDYQRDIAVHFLEGDAHNWWLTVE--KRRGDEVRSFADFEDEFNKKYFPPE 222
Query: 216 VRDQLAHEFEIFEQTEG-MSVSEYSARFTQLSRY 248
D+L E + +G +V EY F +L RY
Sbjct: 223 AWDRL--ECAYLDLVQGNRTVREYDEEFNRLRRY 254
>At4g03840 putative transposon protein
Length = 973
Score = 335 bits (858), Expect = 2e-91
Identities = 170/324 (52%), Positives = 220/324 (67%), Gaps = 9/324 (2%)
Query: 952 WTDACEESFQKLKECLISAPILALPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQL 1011
W +CE++F +LK L +AP+L LP G Y VY DAS VGL CVLMQ G VIAYASRQL
Sbjct: 375 WQRSCEKNFLELKAMLTNAPVLVLPEEGEPYTVYTDASVVGLECVLMQKGSVIAYASRQL 434
Query: 1012 KRHEQNYPTHDLEMAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWME 1071
++HE+NYPTHDLEMAAV+FALKIWR YLYG +IYTDHKSLKYIF Q +LNLRQRRWME
Sbjct: 435 RKHEKNYPTHDLEMAAVVFALKIWRSYLYGAKVQIYTDHKSLKYIFTQPELNLRQRRWME 494
Query: 1072 LLKDYDCTILYHPGKANVVADALSRKSMGSLAHLTAIKRPIVKEFQEIVESGVQFEIDHS 1131
L+ DYD I YH GKAN VADALSR+ A + + +V + + + E++
Sbjct: 495 LVADYDLDIAYHAGKANQVADALSRRRSEVEAERSQV--DLVNMMGTLHVNALSKEVE-- 550
Query: 1132 RTLLAHMKFRSTLIDDIKQAQSQDSELMKMVDNVRNGKVSNFSVDSEGVLWLKSRICVPN 1191
L ++ L+ I+ AQ +D E+ N + + + + G + + R+CVPN
Sbjct: 551 -PLGLGAADQANLLSRIRLAQERDEEIKGWALNNK----TEYQTSNNGTIVVNGRVCVPN 605
Query: 1192 VDDLRRKILEEAHHSSYTIHPGSNKMYQDLREFYWWEGMKRDVANFVSKCLVCQQVKAEH 1251
L+ +IL EAH S ++IHPGSNK+Y+DL+ +Y W GMK+DVA +V+KC CQ VKAEH
Sbjct: 606 NRALKEEILREAHQSKFSIHPGSNKIYRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEH 665
Query: 1252 QKPAGLLQPIEIPKWKWEGIAMDF 1275
Q P+GLLQ + IP+WKW+ I MDF
Sbjct: 666 QVPSGLLQNLPIPEWKWDHITMDF 689
Score = 253 bits (647), Expect = 5e-67
Identities = 125/278 (44%), Positives = 176/278 (62%), Gaps = 19/278 (6%)
Query: 1344 FWKSFQAALGTRLNLSTAFHPQTDGQSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAY 1403
FWK+FQ ALGTR+NLSTA+HPQTDGQSERTIQ LEDMLRAC LD GG+W++YL +
Sbjct: 690 FWKAFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACALDWGGNWEKYLRL----- 744
Query: 1404 NNSYQSSIQMAPFEALYGRRCRSPIGWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQS 1463
ALYGR CR+P+ W VGE +L GP ++ + +++K ++ +L AQ
Sbjct: 745 --------------ALYGRACRTPLCWTPVGERRLFGPIIVDETTERMKFLKIKLKEAQD 790
Query: 1464 RQKSYSDKRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYR 1523
RQKSY++KRR+ LEF V + V+L+ KG RF + KL+PR++GP++++ERVG VAY+
Sbjct: 791 RQKSYANKRRKELEFQVEDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIERVGAVAYK 850
Query: 1524 LALPPDLSRVHPVFHISMLRKYIYDPSHVISHKDVQLDENLSYTEHPVALVDKGVRRLRS 1583
L LPP L+ H VFH+S LRK + + + L EN++ PV ++D+ + R
Sbjct: 851 LDLPPKLNAFHNVFHVSQLRKCLSNQEESVEDVPPGLKENMTVEAWPVQIMDRMTKGTRG 910
Query: 1584 KDIVSVKVLWKGPSGEETTWEPEETIRGKYPHLFENQG 1621
K +KVLW E+ TWE E ++ + F+ G
Sbjct: 911 KSRDLLKVLWNCGGREQYTWETENKMKANFSEWFKEMG 948
Score = 137 bits (346), Expect = 4e-32
Identities = 63/92 (68%), Positives = 75/92 (81%)
Query: 790 DISKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILIYSKSR 849
D+ KTAF TRYGH+EF+VM FGLTNAP AFM +MN VF+ FLD FVI+FIDDIL+YSKS
Sbjct: 287 DVRKTAFLTRYGHFEFVVMPFGLTNAPTAFMKMMNGVFRDFLDEFVIIFIDDILVYSKSW 346
Query: 850 EEHEQHLRLVLQTLREKQLYAKFSKCEFWLES 881
E H++HLR VL+ LRE +L+AK SKC FW S
Sbjct: 347 EAHQEHLRAVLEQLREHELFAKLSKCSFWQRS 378
>At3g29480 hypothetical protein
Length = 718
Score = 319 bits (817), Expect = 9e-87
Identities = 178/371 (47%), Positives = 234/371 (62%), Gaps = 34/371 (9%)
Query: 858 LVLQTLREKQLYAKFSKCEFWLESVAFLGH---IVSKNGISVDPSKVEAVQNWPRPTSVK 914
LV+ ++ +++ K CE +L +++ ++ G+SVD K+EA+++WPRPT+
Sbjct: 379 LVISAVQAEKMIKK--DCEAYLVTISMKSDGEATGAEAGVSVDLEKIEAIKDWPRPTNAT 436
Query: 915 EIRSFLGLAGYYRRFVKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLKECLISAPILA 974
EIRSFLGLAGYYRRFVK F+ +A PLT+LT K V F W+ CEE F LKE L S P+LA
Sbjct: 437 EIRSFLGLAGYYRRFVKGFASMAPPLTKLTGKNVPFVWSPECEEGFVSLKEILTSTPVLA 496
Query: 975 LPTSGGGYVVYCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVIFALKI 1034
LP G Y+VY DASRVGLGCVLMQ GKVIAYASRQL++HE NYPTHDLEM+AV
Sbjct: 497 LPEHGESYMVYTDASRVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMSAV------ 550
Query: 1035 WRHYLYGETCEIYTDHKSLKYIFEQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADAL 1094
+TDHKSLKYI Q +LNLRQRRWMEL+ DYD I YH GKA+VVADAL
Sbjct: 551 ------------FTDHKSLKYIITQPELNLRQRRWMELVADYDLEIAYHHGKASVVADAL 598
Query: 1095 SRKSMGSLAHLTAIKRPIVKEFQEIVESGVQFEIDHSRTLLAHMKFRSTLIDDIKQAQSQ 1154
SRK +G + +V E + + V E L R L+ ++ AQ +
Sbjct: 599 SRKRVGVAPGQSV--EALVSEIRALRLCAVARE-----PLGLEAVDRVDLLSRVRLAQEK 651
Query: 1155 DSELMKMVDNVRNGKVSNFSVDSEGVLWLKSRICVPNVDDLRRKILEEAHHSSYTIHPGS 1214
D L+ + S + + G + + R+CV N ++LRR+IL EAH S ++IHPG+
Sbjct: 652 DEGLIA----ASKAEGSKYQFAANGTILVHGRVCVLNDEELRREILSEAHASMFSIHPGA 707
Query: 1215 NKMYQDLREFY 1225
KMY+DL+E+Y
Sbjct: 708 TKMYRDLKEYY 718
Score = 60.8 bits (146), Expect = 6e-09
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 551 DVSIEGKVLPADLVVLNMVDFDVILGMDWLSLHHATVDCHNKVVKFKPPGEATFSFQGER 610
D+ I + +PA+L + +DVILGMDWL + +DCH V F+ P + +Q R
Sbjct: 315 DIQIARESMPANLFLSPEELYDVILGMDWLDYYRVHLDCHRGRVSFERP-KGRLIYQAVR 373
Query: 611 SWVPNNLISSLRANKLLSRGCQGYLALVRDVQAGE 645
+ + +IS+++A K++ + C+ YL + GE
Sbjct: 374 PTLGSLVISAVQAEKMIKKDCEAYLVTISMKSDGE 408
Score = 56.6 bits (135), Expect = 1e-07
Identities = 38/113 (33%), Positives = 58/113 (50%), Gaps = 5/113 (4%)
Query: 138 FSGSSVSEDPQRFIDGLERLWRALGCSDVRAVELTSYQLEGVAHDWFDTVTHGRQMGSSP 197
FSG + E+ + +ER + + C V+L + LEG AH W+ +VT R+ +
Sbjct: 51 FSGGTSPEEADSWRSRVERNFGSSRCPVEYRVDLAVHFLEGDAHLWWKSVTTRRRQAN-- 108
Query: 198 MAWKEFSKLFMARFLPQSVRDQLAHEFEIFEQTEG-MSVSEYSARFTQLSRYA 249
M+W +F F A++ PQ D++ E E T+G SV EY F +L YA
Sbjct: 109 MSWADFVAEFNAKYFPQEALDRM--EAHFLELTQGERSVREYDREFNRLLVYA 159
>At3g29490 hypothetical protein
Length = 438
Score = 317 bits (812), Expect = 4e-86
Identities = 166/391 (42%), Positives = 234/391 (59%), Gaps = 53/391 (13%)
Query: 1230 MKRDVANFVSKCLVCQQVKAEHQKPAGLLQPIEIPKWKWEGIAMDFVTGLPRTQKGFDSV 1289
MKRDVAN+V++C VCQ VKAEHQ P G+LQ + IP+W
Sbjct: 1 MKRDVANWVAECDVCQLVKAEHQVPGGMLQSLPIPEWNT--------------------- 39
Query: 1290 WVIIDRLTKSAHFLPVKTTYTASQYAKIYLEEIVSLHGVPISIISDRGAQFTAQFWKSFQ 1349
FL ++ T A+ AK Y+ EIV LHGVP
Sbjct: 40 ------------FLAIRKTDGAAVLAKKYVSEIVKLHGVP-------------------- 67
Query: 1350 AALGTRLNLSTAFHPQTDGQSERTIQILEDMLRACVLDLGGSWDRYLPMMEFAYNNSYQS 1409
A +GT++ +ST +HPQTDGQ ERTIQ LEDMLR CVLD GG W +L ++EFAYNNSYQ+
Sbjct: 68 AEMGTKVQMSTPYHPQTDGQFERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYQA 127
Query: 1410 SIQMAPFEALYGRRCRSPIGWFEVGEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQKSYS 1469
I MAPFEALYGR CR+P+ W +VGE + G + +Q+ +++++++ + AQ RQ SY+
Sbjct: 128 GIGMAPFEALYGRPCRTPLCWTQVGERSIYGADYVQETTERIRVLKLNMKEAQDRQWSYA 187
Query: 1470 DKRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLALPPD 1529
DKRRR LEF VG+ V+L+++ ++G R + KL+ R++GPF I+ERVGPVAY L LP
Sbjct: 188 DKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSLRYMGPFRIVERVGPVAYMLELPDV 247
Query: 1530 LSRVHPVFHISMLRKYIYDPSHVISHKDVQLDENLSYTEHPVALVDKGVRRLRSKDIVSV 1589
+ H VFH+SMLRK ++ V++ L N++ V ++++ ++ L+ K I +
Sbjct: 248 MRAFHKVFHVSMLRKCLHKDDEVLAKIPEDLQPNMTLEARQVRVLERRIKELQRKKISLI 307
Query: 1590 KVLWKGPSGEETTWEPEETIRGKYPHLFENQ 1620
KVLW E TW+PE ++ ++ FE Q
Sbjct: 308 KVLWDCDGVTEETWQPEARMKARFKKWFEKQ 338
>At4g08100 putative polyprotein
Length = 1054
Score = 293 bits (749), Expect = 7e-79
Identities = 151/348 (43%), Positives = 214/348 (61%), Gaps = 30/348 (8%)
Query: 741 DYRQLNKVTIKNKYPLPRIDELFDQLQGAQCFSKIDLRSGYHQLKIKSEDISKTAFRTRY 800
D R +N +T+K ++P+PR+D+ D+L G+ FSKIDL+SGYHQ ++K D KTA +T+
Sbjct: 527 DCRAINNITVKYRHPIPRLDDTLDKLHGSSIFSKIDLKSGYHQTRMKEGDEWKTAIKTKQ 586
Query: 801 GHYEFLVMSFGLTNAPAAFMDLMNRVFKPFLDRFVIVFIDDILIYSKSREEHEQHLRLVL 860
YE+LVM FGLTNAP FM LMN V + + FVIV+ DDIL+YSK+ E H HL+LVL
Sbjct: 587 RLYEWLVMPFGLTNAPNTFMRLMNHVLRKHIGVFVIVYFDDILVYSKNLEYHVMHLKLVL 646
Query: 861 QTLREKQLYAKFSKCEFWLESVAFLGHIVSKNGISVDPSKVEAVQNWPRPTSVKEIRSFL 920
LR+++LYA KC F +++ FLG +VS +GI VD KV+A++ WP P +V E
Sbjct: 647 DLLRKEKLYANLKKCTFCTDNLVFLGFVVSADGIKVDEEKVKAIREWPNPKNVSE----- 701
Query: 921 GLAGYYRRFVKDFSKLAFPLTRLTQKKVEFKWTDACEESFQKLKECLISAPILALPTSGG 980
K + FKW DA E +FQ LKE L ++ + LP
Sbjct: 702 -------------------------KDIGFKWEDAQENAFQALKEKLTNSSVPILPNFMK 736
Query: 981 GYVVYCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVIFALKIWRHYLY 1040
+ + CDAS +G+G VLMQ K IAY S +L NYPT+D E+ A++ AL+ W+HYL+
Sbjct: 737 SFEIECDASGLGIGAVLMQDHKPIAYFSEKLGGATLNYPTYDKELYALVRALQTWQHYLW 796
Query: 1041 GETCEIYTDHKSLKYIFEQRDLNLRQRRWMELLKDYDCTILYHPGKAN 1088
+ I+TDH+SLK++ Q+ LN R RW+E ++ + I Y +A+
Sbjct: 797 PKKFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKREAH 844
Score = 46.6 bits (109), Expect = 1e-04
Identities = 32/120 (26%), Positives = 60/120 (49%), Gaps = 8/120 (6%)
Query: 1409 SSIQMAPFEALYGRRCRSPIGWFEV--GEAKLVGPELIQDAIDKVKLIRDRLVTAQSRQK 1466
S+ + +PFE +YG + SP+ + E + + D + +V + R + K
Sbjct: 852 SATKFSPFEIVYGFKPTSPLDLIPLPLSERSSLDGKKKDDLVQQVLNLEART----KQYK 907
Query: 1467 SYSDKRRRPLEFTVGEHVFLRVSPMKGVLRFGKKGKLTPRFIGPFEILERVGPVAYRLAL 1526
Y++K R+ + F G+ V++ + + + KL PR GPF++L+R+ AY+L L
Sbjct: 908 KYANKGRKEVIFNEGDQVWVHLRKKR--FPEVRSSKLMPRIDGPFKVLKRINNNAYKLDL 965
Score = 43.5 bits (101), Expect = 0.001
Identities = 49/211 (23%), Positives = 79/211 (37%), Gaps = 16/211 (7%)
Query: 131 LKLKPPTFSGSSVSEDPQRFIDGLERLWRALGCSDVRAVELTSYQLEGVAHDWFD-TVTH 189
LKLK P F G+ + + +E ++ C V++ + + A W+D VT
Sbjct: 92 LKLKIPAFHGTDNPDTYLEWEQKIELVFLCQECLQSNKVKIAATKFYNYALSWWDQLVTS 151
Query: 190 GRQMGSSPM-AWKEFSKLFMARFLPQSVRDQLAHEFEIFEQTEGMSVSEYSARFTQLSRY 248
R+ P+ W + + RF+P +L Q +V EY L
Sbjct: 152 RRRTRDYPIKTWNQLKFVMRKRFVPSYYHRELHQRLRNLVQ-GSKTVEEYFLEMETLMLR 210
Query: 249 AAYCVTEEMRIKKFIRGLREYIFRSVVGSNCQTFADVLSLALQIEQRQKDKGGTRQDPRK 308
A E + +F+ GL I + + ++L A+ EQ+ K RK
Sbjct: 211 ADLQEDGEAVMSRFMGGLNREIQDRLETQHYVELEEMLHKAVMFEQQIK---------RK 261
Query: 309 KQRVEGSHSNYSNRGGG----SMFGYQGQQK 335
R + +NYS+ FGYQ K
Sbjct: 262 NARSSHTKTNYSSGKPSYQKEEKFGYQNDSK 292
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,900,833
Number of Sequences: 26719
Number of extensions: 1645149
Number of successful extensions: 5700
Number of sequences better than 10.0: 163
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 5070
Number of HSP's gapped (non-prelim): 498
length of query: 1621
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1508
effective length of database: 8,299,349
effective search space: 12515418292
effective search space used: 12515418292
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Medicago: description of AC126790.10