BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126786.8 - phase: 0 /pseudo
(688 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33640 unknown protein 264 1e-70
At4g15080 unknown protein 229 3e-60
At3g22180 hypothetical protein 218 9e-57
At1g69420 hypothetical protein 176 3e-44
At4g01730 hypothetical protein 131 1e-30
At3g51390 unknown protein 64 4e-10
At5g20350 ankyrin-repeat protein 60 3e-09
At3g56920 unknown protein 59 9e-09
At3g04970 unknown protein, contains TNFR/NGFR cysteine-rich region 59 1e-08
At5g04270 rec - like protein 55 1e-07
At3g09320 unknown protein 55 1e-07
At4g22751 unknown protein 55 2e-07
At3g26935 unknown protein, putative, 3' partial 54 3e-07
At3g56930 unknown protein 53 6e-07
At3g48760 unknown protein 52 8e-07
At3g18620 unknown protein 52 8e-07
At4g24630 putative protein 52 1e-06
At4g00840 unknown protein 52 1e-06
At3g60800 unknown protein 52 1e-06
At5g41060 unknown protein 50 5e-06
>At2g33640 unknown protein
Length = 565
Score = 264 bits (674), Expect = 1e-70
Identities = 126/205 (61%), Positives = 148/205 (71%), Gaps = 6/205 (2%)
Query: 1 MGRRHGWELPFHTFQVVAITVFFLLCIAYYAFFAPFLGKDIFEFVAFGVYSLLALSVFFL 60
M RRHGW+LP HTFQVVAITVFFLL +AYYAFFAPFLG ++E++A GVYS LA SV L
Sbjct: 1 MARRHGWQLPAHTFQVVAITVFFLLTVAYYAFFAPFLGNKLYEYIAIGVYSFLAFSVLVL 60
Query: 61 YVRCTAIDPADLGVMIDCDKTSKNRSKLDEELAEPSKTRLKDDGISDQHDSNGCSKLGCC 120
Y+RCT IDPAD G+ + D T ++S+ + P D G +H S CS +G
Sbjct: 61 YIRCTGIDPADPGIFVKADNTPAHKSQNSNYV--PENASAIDGGPYIRHGSGCCSAIGRF 118
Query: 121 LCSFLAREDCRSDEDFILQQQSGE-EDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCR 179
+C L +DCR D Q+QS E E+ALFC+LCNAEVR FSKHCRSC KCVDGFDHHCR
Sbjct: 119 ICGCLVIQDCRRDTQ---QEQSNEQEEALFCSLCNAEVRMFSKHCRSCGKCVDGFDHHCR 175
Query: 180 WLNNCVGRKNYISFVCLMAVSLVWV 204
WLNNCVG+KNYISFVCLMA S W+
Sbjct: 176 WLNNCVGQKNYISFVCLMAASFFWL 200
>At4g15080 unknown protein
Length = 718
Score = 229 bits (585), Expect = 3e-60
Identities = 121/231 (52%), Positives = 149/231 (64%), Gaps = 28/231 (12%)
Query: 1 MGRRHGWELPFHTFQVVAITVFFLLCIAYYAFFAPFLGKDIFEFVAFGVYSLLALSVFFL 60
M R+HGW+LP H FQVVAITVF LL +AYYAFFAPF+G I+E++ GVYS +AL VF L
Sbjct: 1 MVRKHGWQLPAHKFQVVAITVFCLLSVAYYAFFAPFVGGRIWEYILLGVYSPVALIVFVL 60
Query: 61 YVRCTAIDPADLGVMIDCDK---------TSKNRSKLDEELAE--------PSKTRLKDD 103
YVRCTAI+PAD G+M ++ T+K+ S+ +E S+T +
Sbjct: 61 YVRCTAINPADPGIMSKFERGASRGGDLPTAKDISRKFDETGSHLQSSPSVASRTSTLPN 120
Query: 104 G-----ISDQHDSNGCSKLGC-----CLCSFLAREDCRSDEDFILQQQSGEEDALFCTLC 153
+ D + C C EDCRS E+ +QQ E+ALFCTLC
Sbjct: 121 SSVKGSVGDAQRVEAAKRKSCFNPLAICCGVFVYEDCRSKEETD-EQQGDREEALFCTLC 179
Query: 154 NAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLVWV 204
NAEVRKFSKHCRSCDKCVD FDHHCRWLNNCVGRKNY++F+ LMAVSL+W+
Sbjct: 180 NAEVRKFSKHCRSCDKCVDCFDHHCRWLNNCVGRKNYMTFISLMAVSLLWL 230
>At3g22180 hypothetical protein
Length = 706
Score = 218 bits (555), Expect = 9e-57
Identities = 115/229 (50%), Positives = 141/229 (61%), Gaps = 26/229 (11%)
Query: 1 MGRRHGWELPFHTFQVVAITVFFLLCIAYYAFFAPFLGKDIFEFVAFGVYSLLALSVFFL 60
M R+HGW+LP HT QV+AITVF LL +A+YAFFAPF+G I+E+V GVYS +A+ VF L
Sbjct: 1 MVRKHGWQLPAHTLQVIAITVFCLLVVAFYAFFAPFVGGRIWEYVLIGVYSPVAILVFVL 60
Query: 61 YVRCTAIDPADLGVMIDCDK----------TSKNRSKLDEEL-AEPSKTRLKDD------ 103
YVRCTAI+PAD +M D S+N + +L A PS
Sbjct: 61 YVRCTAINPADPRIMSIFDTGVNGDGMVRGLSRNYDETGSQLQASPSVVSRSSTVAGNSS 120
Query: 104 ---GISDQHDSNGCSKLGC-----CLCSFLAREDCRSDEDFILQQQSGEEDALFCTLCNA 155
+ D S+ C C EDCR E ++Q E+ALFCTLCN
Sbjct: 121 VKGSVEDAQRVESVSRRSCYNPLAVFCYVFVVEDCRKKEG-PAEEQGNSEEALFCTLCNC 179
Query: 156 EVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLVWV 204
EVRKFSKHCRSCDKCVD FDHHC+WLNNCVGRKNY++FV LM+ SL+W+
Sbjct: 180 EVRKFSKHCRSCDKCVDCFDHHCKWLNNCVGRKNYVTFVSLMSASLLWL 228
>At1g69420 hypothetical protein
Length = 596
Score = 176 bits (447), Expect = 3e-44
Identities = 98/230 (42%), Positives = 128/230 (55%), Gaps = 33/230 (14%)
Query: 3 RRHGWELPFHTFQVVAITVFFLLCIAYYAFFAPFLGKDIFEFVAFGVYSLLALSVFFLYV 62
R+HGW+LP+H QVVA+ VF L A+Y FFAPF+GK I +++A G+Y+ L V LY+
Sbjct: 2 RKHGWQLPYHPLQVVAVAVFLALGFAFYVFFAPFVGKKIHQYIAMGIYTPLITCVVGLYI 61
Query: 63 RCTAIDPADLGVMIDCDKTSKNRSKLDEELAEPSKTRLKD------------DGISDQHD 110
C A DPAD GV SK K+ E P +KD DG +
Sbjct: 62 WCAASDPADRGVF-----RSKKYLKIPENGKFPLAKDIKDGCGSATGGAKSHDGTCVEDT 116
Query: 111 SNGCSK------------LGCCLCSFLAREDCRSDEDFILQQQSGEEDALFCTLCNAEVR 158
NG +K L C C+ L C S +D +Q S E+ +C+LC EV
Sbjct: 117 ENGSNKKLESSERSSLLRLLCSPCALLC--SCCSGKDESSEQMS-EDGMFYCSLCEVEVF 173
Query: 159 KFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLVWVSCMK 208
K+SKHCR CDKCVD FDHHCRWLNNC+G++NY F LM VS +++ M+
Sbjct: 174 KYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFSLM-VSAIFLLIMQ 222
>At4g01730 hypothetical protein
Length = 499
Score = 131 bits (330), Expect = 1e-30
Identities = 76/207 (36%), Positives = 108/207 (51%), Gaps = 29/207 (14%)
Query: 15 QVVAITVFFLLCIAYYAFFAPFLGKDIFEFVAFGVYSLLALSVFFLYVRCTAIDPADLGV 74
Q+V ++ +L A+Y F FLG I V+S +A+SV L+VRCTAIDP D
Sbjct: 7 QIVGAVIYSVLVAAFYVFLGFFLGNRIAVIALLSVFSSVAVSVIVLFVRCTAIDPTD--- 63
Query: 75 MIDCDKTSKNRSKLDEELAEPSKTRLKDDGISDQHDSNGCSKLGC-CLCSFLAREDC--- 130
KTS + + D+ K R+K + Q +L L +FL R
Sbjct: 64 -----KTSAKKKRKDKSKGVLMKLRVKV--VLSQVVVRFFRRLERKILRNFLRRTYLDPW 116
Query: 131 ---------------RSDEDFILQQQSGEEDALFCTLCNAEVRKFSKHCRSCDKCVDGFD 175
D+D + E+D +C+LC+ EV++ SKHCR+C++CV+GFD
Sbjct: 117 KSSVQLEPLLPFPLVMKDDDSVTPDPKEEDDISYCSLCDLEVKRSSKHCRTCNRCVEGFD 176
Query: 176 HHCRWLNNCVGRKNYISFVCLMAVSLV 202
HHCRWLNNCVG+KNY +F+ LM L+
Sbjct: 177 HHCRWLNNCVGKKNYTTFILLMVFVLL 203
>At3g51390 unknown protein
Length = 340
Score = 63.5 bits (153), Expect = 4e-10
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 148 LFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISF---VCLMAVSLVWV 204
L C C+ E +KHC CD+CV FDHHC WL C+G+KN+ F +C +W
Sbjct: 162 LTCGYCHVEQPPRTKHCHDCDRCVLQFDHHCVWLGTCIGQKNHSKFWWYICEETTLCIWT 221
Query: 205 SCM 207
M
Sbjct: 222 LIM 224
>At5g20350 ankyrin-repeat protein
Length = 592
Score = 60.5 bits (145), Expect = 3e-09
Identities = 22/53 (41%), Positives = 33/53 (61%)
Query: 150 CTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLV 202
C C +KHC +CD+CV+ FDHHC W++NCVG+KN F + + ++
Sbjct: 345 CATCKIIRPLRAKHCSTCDRCVEQFDHHCPWVSNCVGKKNKWEFFLFLLLEVL 397
>At3g56920 unknown protein
Length = 338
Score = 58.9 bits (141), Expect = 9e-09
Identities = 25/70 (35%), Positives = 35/70 (49%), Gaps = 9/70 (12%)
Query: 149 FCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLV------ 202
FC C + HC C+ CV FDHHC W+ C+ +NY FVC ++ S +
Sbjct: 143 FCDTCQLYRPPRAFHCSICNNCVQRFDHHCPWVGQCIALRNYPFFVCFLSCSTLLCIYVF 202
Query: 203 ---WVSCMKM 209
WVS +K+
Sbjct: 203 VFSWVSMLKV 212
>At3g04970 unknown protein, contains TNFR/NGFR cysteine-rich region
Length = 397
Score = 58.5 bits (140), Expect = 1e-08
Identities = 21/48 (43%), Positives = 29/48 (59%)
Query: 150 CTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLM 197
C+ C SKHC C++CV FDHHC W+NNC+G +N F+ +
Sbjct: 162 CSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTKYFMAFL 209
>At5g04270 rec - like protein
Length = 284
Score = 55.5 bits (132), Expect = 1e-07
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 150 CTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLV 202
C C A + HCR C +CV DHHC W+NNCVG NY +F L+ + V
Sbjct: 107 CDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGYANYKAFFILVFYATV 159
>At3g09320 unknown protein
Length = 286
Score = 55.1 bits (131), Expect = 1e-07
Identities = 22/48 (45%), Positives = 27/48 (55%)
Query: 146 DALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISF 193
D +C C+ + HCR C +CV DHHC W+NNCVG NY F
Sbjct: 95 DLRYCQKCSHFKPPRAHHCRVCKRCVLRMDHHCIWINNCVGHTNYKVF 142
>At4g22751 unknown protein
Length = 302
Score = 54.7 bits (130), Expect = 2e-07
Identities = 22/56 (39%), Positives = 28/56 (49%)
Query: 142 SGEEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLM 197
S +C CN S HC C +C+ DHHC W+ NCVG NY SF+ +
Sbjct: 110 SSSHGVRYCRKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFL 165
>At3g26935 unknown protein, putative, 3' partial
Length = 351
Score = 53.9 bits (128), Expect = 3e-07
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query: 149 FCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISF---------VCLMAV 199
+C C HC C+ CV+ FDHHC W+ C+G +NY F +C+
Sbjct: 150 YCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGMRNYRFFFMFVFSTTLLCIYVF 209
Query: 200 SLVWVSCMKM 209
+ WV K+
Sbjct: 210 AFCWVYIRKI 219
>At3g56930 unknown protein
Length = 477
Score = 52.8 bits (125), Expect = 6e-07
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 149 FCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVS 200
FC C + HC C+ CV FDHHC W+ C+G +NY F ++ S
Sbjct: 147 FCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIGVRNYRFFFMFISTS 198
>At3g48760 unknown protein
Length = 470
Score = 52.4 bits (124), Expect = 8e-07
Identities = 18/42 (42%), Positives = 24/42 (56%)
Query: 149 FCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNY 190
+C C + HC C+ CV+ FDHHC WL C+G +NY
Sbjct: 153 YCDTCMLYRPPRASHCSICNNCVEKFDHHCPWLGQCIGLRNY 194
>At3g18620 unknown protein
Length = 345
Score = 52.4 bits (124), Expect = 8e-07
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 149 FCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLVWVS 205
FC C+ + HCR+C CV DHHC ++ NCVG N+ F+ + +++ S
Sbjct: 149 FCNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHKYFIAFLISAVISTS 205
>At4g24630 putative protein
Length = 374
Score = 51.6 bits (122), Expect = 1e-06
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 149 FCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVS 200
+C C HC C+ CV+ FDHHC W+ C+G +NY F ++ S
Sbjct: 137 YCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSS 188
>At4g00840 unknown protein
Length = 291
Score = 51.6 bits (122), Expect = 1e-06
Identities = 20/49 (40%), Positives = 26/49 (52%)
Query: 149 FCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLM 197
+CT C HC C +CV DHHC W+ NCVG +NY F+ +
Sbjct: 112 YCTKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYKFFLLFL 160
>At3g60800 unknown protein
Length = 307
Score = 51.6 bits (122), Expect = 1e-06
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 135 DFI-LQQQSGEED--ALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYI 191
DF+ LQ S + FC CN HC C +CV DHHC W+ NCVG NY
Sbjct: 111 DFVGLQSDSSSSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYK 170
Query: 192 SFVCLM 197
F+ +
Sbjct: 171 YFLLFL 176
>At5g41060 unknown protein
Length = 410
Score = 49.7 bits (117), Expect = 5e-06
Identities = 17/45 (37%), Positives = 24/45 (52%)
Query: 149 FCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISF 193
+C C HC C+ CV+ FDHHC W+ C+ ++NY F
Sbjct: 148 YCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIAQRNYRFF 192
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.354 0.157 0.536
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,899,086
Number of Sequences: 26719
Number of extensions: 475383
Number of successful extensions: 2739
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2652
Number of HSP's gapped (non-prelim): 47
length of query: 688
length of database: 11,318,596
effective HSP length: 106
effective length of query: 582
effective length of database: 8,486,382
effective search space: 4939074324
effective search space used: 4939074324
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 64 (29.3 bits)
Medicago: description of AC126786.8