BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC126786.2 - phase: 0 
         (161 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g20830 unknown protein                                             221  2e-58
At5g27570 cdc20-like protein                                           29  1.3
At4g27820 putative beta-glucosidase                                    28  2.2
At1g51360 unknown protein                                              28  2.2
At5g06800 unknown protein                                              27  3.7
At3g59970 methylenetetrahydrofolate reductase MTHFR1                   27  3.7
At5g36080 putative protein                                             27  4.8
At1g36830 hypothetical protein                                         27  4.8
At1g05490 hypothetical protein                                         27  4.8
At2g44160 methylenetetrahydrofolate reductase (MTHFR2)                 26  8.2

>At1g20830 unknown protein
          Length = 349

 Score =  221 bits (562), Expect = 2e-58
 Identities = 99/130 (76%), Positives = 117/130 (89%)

Query: 1   ISRNLKYEDPFDNPLVKVSKSKSSVEMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQWKRP 60
           IS++L YEDPF+NP VK+ K  S+VEMCGKVYRLAPVTLT++EQ +HQ+RRSRAYQWKRP
Sbjct: 168 ISKSLNYEDPFNNPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRP 227

Query: 61  TVFLKEGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEA 120
           T+FLKEG+S+PPDVDPDT+RWIPANHPFATT +DI +D A  NV QK GVPFRI+AEHEA
Sbjct: 228 TIFLKEGDSIPPDVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEA 287

Query: 121 LQRKLEALQN 130
           +Q+KLEALQN
Sbjct: 288 MQKKLEALQN 297


>At5g27570 cdc20-like protein
          Length = 411

 Score = 28.9 bits (63), Expect = 1.3
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 39 LTQEEQAVHQRRRSRAYQWKRPTVFLKEGESVPPDVDPDTI---RWIPANHPFATTSTDI 95
          +TQ  +A++Q R        +P   L    S PP   P ++   R+IP N      +  I
Sbjct: 30 MTQLAEAMNQNRTRILAFRNKPKALLSSNHSDPPHQQPISVKPRRYIPQNSERVLDAPGI 89

Query: 96 GEDF 99
           +DF
Sbjct: 90 ADDF 93


>At4g27820 putative beta-glucosidase
          Length = 498

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 19  SKSKSSVEMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQWK-RPTVF 63
           SK K S+ +    + L+P T +++++   QR ++  Y W  +P VF
Sbjct: 245 SKQKGSIGLSIFAFGLSPYTNSKDDEIATQRAKTFLYGWMLKPLVF 290


>At1g51360 unknown protein
          Length = 210

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 28  CGKVYRLAPVTLTQEEQAVHQRRRSR----AYQWKRPTV-FLKEGESVPPDVDPDTIRWI 82
           CG ++RL   T +     +H R RS+    AY      V  +KE ES+  D+    + WI
Sbjct: 44  CGSIHRLITTTASDFTHVLHSRYRSKEDLNAYAIHPDHVRVVKESESIREDI--MAVDWI 101

Query: 83  PANHPFA 89
               P A
Sbjct: 102 AEQAPEA 108


>At5g06800 unknown protein
          Length = 375

 Score = 27.3 bits (59), Expect = 3.7
 Identities = 16/61 (26%), Positives = 25/61 (40%)

Query: 26  EMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQWKRPTVFLKEGESVPPDVDPDTIRWIPAN 85
           E+C + Y  + VT      + HQ ++S       P+  +  G   P  V+   IRW    
Sbjct: 142 ELCRRTYSNSNVTHLNFTSSQHQPKQSHPRFSSPPSFSIHGGSMAPNCVNKTRIRWTQDL 201

Query: 86  H 86
           H
Sbjct: 202 H 202


>At3g59970 methylenetetrahydrofolate reductase MTHFR1
          Length = 592

 Score = 27.3 bits (59), Expect = 3.7
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 46  VHQRRRSRAYQWKRPTVFLKEGESVPPDVDPDTIRWIPANHPFATTSTDIG-EDFAHKNV 104
           + + + SR+  W+RP    +  E V P      I W  AN P +  S   G  DF H   
Sbjct: 303 IDESKISRSLPWRRPANVFRTKEDVRP------IFW--ANRPKSYISRTKGWNDFPHGRW 354

Query: 105 SQKHGVPFRIQAEHEALQRK 124
              H   +   ++++  + K
Sbjct: 355 GDSHSAAYSTLSDYQFARPK 374


>At5g36080 putative protein
          Length = 153

 Score = 26.9 bits (58), Expect = 4.8
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 95  IGEDFAHKNVSQKHGVPFRIQAEHEAL--QRKLEALQNVSLSRIRNFNSPMFDTVLEVVV 152
           +G +  HK++ + H   F ++  HE +     L+ L    L  I NFN  +F+  + +++
Sbjct: 79  VGVEVVHKDLGEAH--KFLLEVVHEEIVEDNLLKQLYKTLLLVIENFNDKVFNNFVPMLL 136


>At1g36830 hypothetical protein
          Length = 243

 Score = 26.9 bits (58), Expect = 4.8
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 80  RWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEH--EALQRKLEA 127
           +WI A      T   + EDF  +N+  +HG+P+ I  ++      RK++A
Sbjct: 28  KWIEAKAFQQVTEKQV-EDFLWENIVCQHGIPYEIITDNGTNLTSRKIKA 76


>At1g05490 hypothetical protein
          Length = 731

 Score = 26.9 bits (58), Expect = 4.8
 Identities = 19/68 (27%), Positives = 31/68 (44%), Gaps = 5/68 (7%)

Query: 88  FATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEALQRKLEALQNVSLSRIRNFNSPMFDTV 147
           FA+T+    ED    N  +  G P R + E+    ++L   +  S+SR       +F T 
Sbjct: 424 FASTNVSKYEDSVSINSGKTTGAPSRPEVENPETGKELNTPEKPSISR-----PEIFTTE 478

Query: 148 LEVVVQMP 155
             + VQ+P
Sbjct: 479 KAIDVQVP 486


>At2g44160 methylenetetrahydrofolate reductase (MTHFR2)
          Length = 594

 Score = 26.2 bits (56), Expect = 8.2
 Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 23/109 (21%)

Query: 26  EMCGK-----VYRLAPVTLTQEEQA---------VHQRRRSRAYQWKRPTVFLKEGESVP 71
           EMC K     V  L   TL  E+ A         + + + SR+  W+RP    +  E V 
Sbjct: 269 EMCKKMLAHGVKSLHLYTLNMEKSALAILMNLGMIDESKISRSLPWRRPANVFRTKEDVR 328

Query: 72  PDVDPDTIRWIPANHPFATTSTDIG-EDFAHKNVSQKHGVPFRIQAEHE 119
           P      I W  AN P +  S   G EDF            +   ++H+
Sbjct: 329 P------IFW--ANRPKSYISRTKGWEDFPQGRWGDSRSASYGALSDHQ 369


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.318    0.133    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,546,810
Number of Sequences: 26719
Number of extensions: 132213
Number of successful extensions: 382
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 378
Number of HSP's gapped (non-prelim): 10
length of query: 161
length of database: 11,318,596
effective HSP length: 91
effective length of query: 70
effective length of database: 8,887,167
effective search space: 622101690
effective search space used: 622101690
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)