BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC126784.6 - phase: 0 
         (135 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g39440 hypothetical protein                                        133  3e-32
At1g05760 disease resistance protein RTM1                              28  1.5
At5g38460 glucosyltransferase-like protein                             27  4.2
At1g73920 putative lipase                                              27  4.2
At5g08141 bZip transcription factor AtbZip75                           26  5.5
At4g18160 potassium channel - like protein                             26  5.5
At5g04410 unknown protein                                              25  9.5
At4g37590 unknown protein                                              25  9.5

>At2g39440 hypothetical protein
          Length = 773

 Score =  133 bits (334), Expect = 3e-32
 Identities = 67/142 (47%), Positives = 87/142 (61%), Gaps = 22/142 (15%)

Query: 14  DGIEDLSGRVHLLPCCIKHDGPTEVSQYFKPKPTGV----------VGEDGLPLQQSHFR 63
           + I DLS +VH LPCCI+ DGP EVS YFKPK +            V  DG+  +++HFR
Sbjct: 83  NSIVDLSSQVHQLPCCIRFDGPVEVSHYFKPKSSVRLMWKAVEFVDVEIDGVKTEEAHFR 142

Query: 64  GRLLEGTTLPLPHNYSGFVL---------GKKNS---VESSNSWETSVTFNDITYWNHDS 111
           GR L+G T+ LP  YSGFVL         GK+ +    E +  WE    FN++TYWNHDS
Sbjct: 143 GRKLQGATISLPSGYSGFVLRQASNLNANGKRKASMPTEDNQCWEVKAKFNNLTYWNHDS 202

Query: 112 VPSNNDDFSRAFHWIPVAEAVS 133
           +PS +D F R+FHW  +AEAV+
Sbjct: 203 LPSKDDTFFRSFHWFSIAEAVT 224


>At1g05760 disease resistance protein RTM1
          Length = 174

 Score = 28.1 bits (61), Expect = 1.5
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 62  FRGRLLEGTTLPLPHNYSGFVLGKKNSVESSNSWETSVTFNDIT--YWNHDSVPSNNDDF 119
           F G + +   L  PH Y   + G+    E++N    S+ FN  T  Y    +  S+ND F
Sbjct: 62  FSGNMFDVIELNYPHEYITGISGEYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKF 121

Query: 120 S 120
           +
Sbjct: 122 A 122


>At5g38460 glucosyltransferase-like protein
          Length = 533

 Score = 26.6 bits (57), Expect = 4.2
 Identities = 9/19 (47%), Positives = 12/19 (62%)

Query: 95  WETSVTFNDITYWNHDSVP 113
           W  + T+ND+TYW  D  P
Sbjct: 91  WYRNGTYNDLTYWGLDYPP 109


>At1g73920 putative lipase
          Length = 704

 Score = 26.6 bits (57), Expect = 4.2
 Identities = 13/36 (36%), Positives = 18/36 (49%), Gaps = 2/36 (5%)

Query: 84  GKKNSVESSNSWETSVTFND--ITYWNHDSVPSNND 117
           GK N +E  + WE   TF    +  W H+ V S N+
Sbjct: 44  GKANILEGLHGWELRPTFRGPRLPRWMHNGVSSFNE 79


>At5g08141 bZip transcription factor AtbZip75
          Length = 137

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)

Query: 90  ESSNSWETSVTFND---ITYWNHDSVPSNNDDF 119
           E+S   ET  +F+D   I+Y NH+ +  N +DF
Sbjct: 94  ENSQLKETVSSFHDQYTISYGNHEGILGNTNDF 126


>At4g18160 potassium channel - like protein
          Length = 436

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query: 55  LPLQQSHFRGRLLEGTTLPLPHNYSGFVLGKKNSVESSNSWETSVTFND 103
           +P+  S F+ RL+ G     P + S F+   K    SS+S   +  F+D
Sbjct: 38  MPMTPSEFKERLIFGPFSCSPRDSSHFIDSMKQPSPSSSSTAVNNPFSD 86


>At5g04410 unknown protein
          Length = 567

 Score = 25.4 bits (54), Expect = 9.5
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 73  PLPHNYSGFVLGKKNSVESSNSWETSVTFNDITYWNHDSVP 113
           P P      V G K +VE   S E S +  D  + + DS P
Sbjct: 401 PAPKELEKEVAGGKEAVEEKESGEGSSSKQDTDFKDFDSAP 441


>At4g37590 unknown protein
          Length = 580

 Score = 25.4 bits (54), Expect = 9.5
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 58  QQSHFRGRLLEGTTLPLPHNYSGFVLGKKNSVESSNSWETS 98
           Q+SH +G+L++G  L +   +S    GK+ S +  +S  TS
Sbjct: 521 QESHNQGKLMKGGGLGVSRVFSKLWSGKERSGDMISSSGTS 561


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.316    0.136    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,585,426
Number of Sequences: 26719
Number of extensions: 156463
Number of successful extensions: 323
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 316
Number of HSP's gapped (non-prelim): 9
length of query: 135
length of database: 11,318,596
effective HSP length: 88
effective length of query: 47
effective length of database: 8,967,324
effective search space: 421464228
effective search space used: 421464228
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 54 (25.4 bits)