BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126009.4 - phase: 0
(162 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g32300 uclacyanin I - like predicted GPI-anchored protein 95 2e-20
At5g26330 copper binding protein - like, predicted GPI-anchored ... 92 1e-19
At3g60270 stellacyanin (uclacyanin 3) - like predicted GPI-ancho... 88 2e-18
At5g20230 blue copper binding protein (bcb) 87 4e-18
At2g02850 putative basic blue protein (plantacyanin) 86 7e-18
At3g27200 blue copper protein, putative 85 2e-17
At2g26720 putative phytocyanin, predicted GPI-anchored protein 84 4e-17
At2g31050 phytocyanin - like predicted GPI-anchored protein 79 1e-15
At3g01070 lamin - like predicted GPI-anchored protein 77 4e-15
At3g60280 uclacyanin 3 76 7e-15
At4g12880 blue copper-binding protein, 15K (lamin) 75 2e-14
At2g44790 phytocyanin, blue copper-binding protein II 72 1e-13
At3g18590 predicted GPI-anchored protein 72 1e-13
At5g07475 putative protein 71 2e-13
At1g22480 blue copper protein precursor-like predicted GPI-ancho... 71 3e-13
At3g20570 predicted GPI-anchored protein 70 4e-13
At5g15350 unknown protein 69 1e-12
At1g64640 GPI anchored protein like protein 69 1e-12
At4g31840 predicted GPI-anchored protein 69 1e-12
At1g72230 blue copper protein - like predicted GPI-anchored protein 66 9e-12
>At2g32300 uclacyanin I - like predicted GPI-anchored protein
Length = 261
Score = 94.7 bits (234), Expect = 2e-20
Identities = 54/151 (35%), Positives = 82/151 (53%), Gaps = 7/151 (4%)
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
MAS +++I+S+ L + +A TD+ +G GWTV WA + F VGDNLVF+Y
Sbjct: 1 MASREMLIIISVLATTLIGLTVA-TDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSY 59
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 120
+ H+V +V F SC + G ++ L T G+++++CG+ HCS + MKL
Sbjct: 60 PAAFHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCS-QGMKLE 118
Query: 121 ITV-----LAEGAPAPSPPPSSDAHSVVSSL 146
+ V +A AP P+ PS +A S S L
Sbjct: 119 VNVVPTATVAPTAPLPNTVPSLNAPSPSSVL 149
>At5g26330 copper binding protein - like, predicted GPI-anchored
protein
Length = 187
Score = 92.0 bits (227), Expect = 1e-19
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 7 VLILSISMVLLSSVAIAATDYIVGDDKGWTV--DFDYTQWAQDKVFRVGDNLVFNYDPSR 64
+++ +++ +++ A Y VGD GWT + DY WA K F +GD ++F Y+P
Sbjct: 4 IIVAALACIVVMLRLSEAAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEYNPQF 63
Query: 65 HNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVL 124
HNV +V +++SC +TG D I L G ++ CGV HC A Q KL + VL
Sbjct: 64 HNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQ-KLDLHVL 122
Query: 125 AEGAPAP-SPPPSSDAHSVVSS 145
+ P S PP+S + S S+
Sbjct: 123 LPASSTPLSDPPTSSSSSPPST 144
>At3g60270 stellacyanin (uclacyanin 3) - like predicted GPI-anchored
protein
Length = 187
Score = 87.8 bits (216), Expect = 2e-18
Identities = 50/138 (36%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 4 SRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPS 63
S L + ++L++ A+ A + VGD+ GWT+ +YT W +K FRVGD L F Y PS
Sbjct: 3 STAATALLLLLLLVAVPAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGPS 62
Query: 64 RHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITV 123
H+V VN + C ++ S G I L G ++C HCS MKL + V
Sbjct: 63 -HSVAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSL-GMKLAVQV 120
Query: 124 LAEGAPAPSPPPSSDAHS 141
LA + P P PS+ + S
Sbjct: 121 LAAVSLEPPPSPSAPSPS 138
>At5g20230 blue copper binding protein (bcb)
Length = 196
Score = 87.0 bits (214), Expect = 4e-18
Identities = 52/138 (37%), Positives = 72/138 (51%), Gaps = 15/138 (10%)
Query: 14 MVLLSSVAIAATDYIVGDDKGWTVDFD---YTQWAQDKVFRVGDNLVFNYDPSRHNVFKV 70
+++ ++V + A DY VGDD WT D YT WA K FRVGD L F++ RH+V V
Sbjct: 12 VLVFAAVVVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVV 71
Query: 71 NGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVLAEGA-- 128
+ F++C ++ I L T G ++++C V DHC Q KL ITV+A GA
Sbjct: 72 SEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQ-KLSITVVAAGATG 130
Query: 129 ---------PAPSPPPSS 137
PAP PS+
Sbjct: 131 GATPGAGATPAPGSTPST 148
>At2g02850 putative basic blue protein (plantacyanin)
Length = 129
Score = 86.3 bits (212), Expect = 7e-18
Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 6 VVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRH 65
+V ++++S++LL + + A Y VGD WT F+ W + K FR GD LVFNY+P H
Sbjct: 15 IVTLMAVSVLLLQADYVQAATYTVGDSGIWT--FNAVGWPKGKHFRAGDVLVFNYNPRMH 72
Query: 66 NVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVL 124
NV KV+ + +C P + ++GKD I L ++G+ +++C +HC + MK+ +T +
Sbjct: 73 NVVKVDSGSYNNCKTPTGAKPYTSGKDRITL-SKGQNFFICNFPNHCES-DMKIAVTAV 129
>At3g27200 blue copper protein, putative
Length = 174
Score = 84.7 bits (208), Expect = 2e-17
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 5 RVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSR 64
+ VL++ + LLS A +++G +GW D+ W+ D+ F+VGD +VF Y
Sbjct: 4 QAVLVILVFSGLLSVKTALAARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYSELH 63
Query: 65 HNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVL 124
V + T ++SC +LS+G D+++L G +++ CG HC + MK+ + V+
Sbjct: 64 SVVELGSETAYKSCDLGTSVNSLSSGNDVVKLSKTGTRYFACGTVGHCE-QGMKIKVNVV 122
Query: 125 AEGAPAPSPPPSSDAHS 141
+ + + S P S + S
Sbjct: 123 SSDSKSASSPSGSGSGS 139
>At2g26720 putative phytocyanin, predicted GPI-anchored protein
Length = 206
Score = 83.6 bits (205), Expect = 4e-17
Identities = 51/133 (38%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 15 VLLSSVAIAATDYIVGDDKGWT-VDFDYTQWAQDKVFRVGDNLVFNYDPSRHNVFKVNGT 73
V L VA+ T + VG+ KGWT + DY WA +VF+VGD LVF Y+ H+V +V
Sbjct: 17 VTLFGVAVGGTVHKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHN 76
Query: 74 LFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVLAE-----GA 128
F+ C TG D I L G + ++CGV HC Q KL I VL
Sbjct: 77 DFEMCESSKPLRRYKTGSDSISLTKPGLQHFICGVPGHCKKGQ-KLQIHVLPASLGHVAV 135
Query: 129 PAPSPPPSSDAHS 141
P P P S + S
Sbjct: 136 PVPGPVRSQSSSS 148
>At2g31050 phytocyanin - like predicted GPI-anchored protein
Length = 200
Score = 79.0 bits (193), Expect = 1e-15
Identities = 48/132 (36%), Positives = 66/132 (49%), Gaps = 9/132 (6%)
Query: 14 MVLLSSVAIAATDYIVGDDKGWTV-DFDYTQWAQDKVFRVGDNLVFNYDPSRHNVFKVNG 72
+V L +++ T + VGD GWT+ +Y WA F+VGD+LVF Y+ H+V +V
Sbjct: 16 LVALFGISVGGTVHKVGDSDGWTIMSVNYETWASTITFQVGDSLVFKYNKDFHDVTEVTH 75
Query: 73 TLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVLAE-----G 127
++ C TG DI+ L G + ++CG HC Q KL I VL
Sbjct: 76 NDYEMCEPSKPLARYETGSDIVILTKPGLQHFICGFPGHCDMGQ-KLQIHVLPASLGPVA 134
Query: 128 APAPSP--PPSS 137
AP P P PPSS
Sbjct: 135 APVPGPVRPPSS 146
>At3g01070 lamin - like predicted GPI-anchored protein
Length = 167
Score = 77.0 bits (188), Expect = 4e-15
Identities = 49/164 (29%), Positives = 83/164 (49%), Gaps = 4/164 (2%)
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
MA V++ ++ LL++ + A + VGD+K W + +YT WAQDK F + D L F Y
Sbjct: 1 MARVAVLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVY 60
Query: 61 DPSRHNVFKVNGTLFQSC--TFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMK 118
+ +++NV +VN T + SC P N + G+D++ L + + G C MK
Sbjct: 61 ERNQYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYG-GMK 119
Query: 119 LVITVLAEGAPAPSPPPSSDAHSVVSSLFGVVMAIMVAIAVIFA 162
L + V + P P+ P+ ++ S+ G ++ +AV A
Sbjct: 120 LAVLV-EKPPPPPAAAPNKNSARRTFSVSGFAYQFLIPVAVFAA 162
>At3g60280 uclacyanin 3
Length = 222
Score = 76.3 bits (186), Expect = 7e-15
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 11 SISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHNVFKV 70
++ + L + A+ A + VGD GWT + DYT W K FRVGD L F Y S H+V V
Sbjct: 8 ALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS-HSVSVV 66
Query: 71 NGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVLAEGAPA 130
+ + +C + + G I L T G ++C HC MKL + VLA AP+
Sbjct: 67 DKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCK-NGMKLAVPVLA-AAPS 124
Query: 131 PSPPPS 136
PS P S
Sbjct: 125 PSTPSS 130
>At4g12880 blue copper-binding protein, 15K (lamin)
Length = 141
Score = 74.7 bits (182), Expect = 2e-14
Identities = 49/136 (36%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 13 SMVLLSSVAIA-----------ATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYD 61
SMVL+S+V +A A Y+VGD K W + +YT WAQ K F VGD L F +
Sbjct: 4 SMVLISAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFY 63
Query: 62 PSRHNVFKVNGTLFQSC--TFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKL 119
+HN+ +VN ++ C P +N G+DI+ L E R++Y+ C + MKL
Sbjct: 64 RDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPL-YETRRYYLLDGRGGC-VQGMKL 121
Query: 120 VITVLAEGAPAPSPPP 135
+ V P P PP
Sbjct: 122 DVLVETPPPPPPFTPP 137
>At2g44790 phytocyanin, blue copper-binding protein II
Length = 202
Score = 72.4 bits (176), Expect = 1e-13
Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
MA + +L + ++ +VA+ T WT DY+ WA K FRVGD L F Y
Sbjct: 9 MAVAAATALLLVLTIVPGAVAVTYTIE-------WTTGVDYSGWATGKTFRVGDILEFKY 61
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSAR-QMKL 119
S H V V+ + C E S G I LKT G +++C HC MKL
Sbjct: 62 G-SSHTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKL 120
Query: 120 VITVLA--EGAPAPSPPPSS 137
+ V+A G PA PPSS
Sbjct: 121 AVNVVAGSAGPPATPTPPSS 140
>At3g18590 predicted GPI-anchored protein
Length = 188
Score = 72.0 bits (175), Expect = 1e-13
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGW------TVDFDYTQWAQDKVFRVGD 54
M SS+ ++I+ + +++T++ VG + GW T+ + QWA D F+VGD
Sbjct: 1 MDSSKKIIIVMFLVTFYMFSCVSSTEFEVGGENGWIVPKSKTLGDAFNQWASDNRFKVGD 60
Query: 55 NLVFNYDPSRHNVFKVNGTLFQSCTFPPKNEALSTGKD-IIQLKTEGRKWYVCGVADHCS 113
L F Y ++ +V V+ ++ C K + S +D + +L G +++ GV+ HC
Sbjct: 61 TLRFKY--TKDSVLVVSEEEYKKCK-ATKPQLYSNNEDTVFKLDRPGLFYFISGVSGHCE 117
Query: 114 ARQMKLVITVLAEGAPAPSPPPSSDAHSVVSS 145
Q K+++ V+ + SPPPSS + S SS
Sbjct: 118 KGQ-KMIVKVMETESSTESPPPSSSSSSSSSS 148
>At5g07475 putative protein
Length = 192
Score = 71.2 bits (173), Expect = 2e-13
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 24 ATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHNVFKVNGTLFQSCTFPPK 83
AT Y VGD GW + D W K F GD L+F Y S H+V++V +Q+C
Sbjct: 27 ATTYFVGDSSGWDISSDLESWTSGKRFSPGDVLMFQYS-STHSVYEVAKDNYQNCNTTDA 85
Query: 84 NEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVLAEG---APAPSP 133
+ G + L G +++VCG HC A M+L++ V G AP SP
Sbjct: 86 IRTFTNGNTTVALSKPGNRFFVCGNRLHCFA-GMRLLVNVEGNGPSQAPVGSP 137
>At1g22480 blue copper protein precursor-like predicted GPI-anchored
protein
Length = 174
Score = 70.9 bits (172), Expect = 3e-13
Identities = 46/133 (34%), Positives = 67/133 (49%), Gaps = 17/133 (12%)
Query: 8 LILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHNV 67
L+L SMV +S A + W++ DYT K F VGD +VFNY H V
Sbjct: 8 LVLIFSMVAQASSASLTVN--------WSLGTDYTPLTTGKTFSVGDTIVFNYGAG-HTV 58
Query: 68 FKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITV---- 123
+V+ ++SCT + S+G I L T G ++++CG+ HC+A MKL +TV
Sbjct: 59 DEVSENDYKSCTLGNSITSDSSGTTTIALTTTGPRYFICGIPGHCAA-GMKLAVTVASNS 117
Query: 124 ---LAEGAPAPSP 133
+A G P+P
Sbjct: 118 SNGVAGGTTTPTP 130
>At3g20570 predicted GPI-anchored protein
Length = 203
Score = 70.5 bits (171), Expect = 4e-13
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 24 ATDYIVGDDKGWTVDFD---YTQWAQDKVFRVGDNLVFNYDPSRHNVFKVNGTLFQSCTF 80
A ++ VG GWTV Y+QWA+ F++GD+L+F Y ++ +V +V + SC
Sbjct: 27 AREFTVGGATGWTVPSGSQVYSQWAEQSRFQIGDSLLFVYQSNQDSVLQVTRDAYDSCNT 86
Query: 81 PPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVLAE---------GAPAP 131
+ GK + L G +++ G D+C + KLV+ V+A+ P+P
Sbjct: 87 DSPTAKFADGKTSVTLNHSGPYYFISGNKDNCKKNE-KLVVIVMADRSGNKNTASSPPSP 145
Query: 132 SPPPSSDA 139
+P PS ++
Sbjct: 146 APAPSGES 153
>At5g15350 unknown protein
Length = 172
Score = 68.9 bits (167), Expect = 1e-12
Identities = 45/143 (31%), Positives = 73/143 (50%), Gaps = 11/143 (7%)
Query: 7 VLILSISMVLLSSV---AIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPS 63
VLI ++ + L + + A Y VG++K W + +YT WAQ K F +GD L F +D +
Sbjct: 6 VLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRN 65
Query: 64 RHNVFKVNGTLFQSC--TFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVI 121
+HN+ +VN T ++ C P +N G+DI+ L + + +Y+ C MKL +
Sbjct: 66 QHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTL-NQTKHYYLLDGKGGCYG-GMKLSV 123
Query: 122 TVLAEGAPAPSPPPSSDAHSVVS 144
V P PP S+ ++ S
Sbjct: 124 KV----EKLPPPPKSAPVKNIGS 142
>At1g64640 GPI anchored protein like protein
Length = 191
Score = 68.9 bits (167), Expect = 1e-12
Identities = 40/143 (27%), Positives = 75/143 (51%), Gaps = 5/143 (3%)
Query: 1 MASSRVVLILSISMVLLSSVA-IAATDYIVGDDKGWTVDFD---YTQWAQDKVFRVGDNL 56
++ + VV++L + ++L + +++T Y VGD W + D Y++W + F++GD+L
Sbjct: 6 LSKTMVVVVLQVMILLGQEIGKVSSTLYKVGDLDAWGIPIDAKVYSKWPKSHSFKIGDSL 65
Query: 57 VFNYDPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQ 116
+F Y PS ++ +V + F+SC ++ G + L G ++ HC+ Q
Sbjct: 66 LFLYPPSEDSLIQVTPSNFKSCNTKDPILYMNDGNSLFNLTQNGTLYFTSANPGHCTKYQ 125
Query: 117 MKLVITVLAEGAPAPSPPPSSDA 139
KL+++V A A + PSS A
Sbjct: 126 -KLLVSVGTYSAEAEALSPSSAA 147
>At4g31840 predicted GPI-anchored protein
Length = 177
Score = 68.6 bits (166), Expect = 1e-12
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 1 MASSR--VVLILSISMVLLSSVAIAATDYIVGDDKG-WTV----DFDYTQWAQDKVFRVG 53
MASS V + L IS+ SSV A + VG G W + F + +WAQ F+VG
Sbjct: 1 MASSSLLVTIFLCISVFFFSSVN--ANEVTVGGKSGDWKIPPSSSFSFNEWAQKARFKVG 58
Query: 54 DNLVFNYDPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHC- 112
D +VF Y+ + +V +V ++ C + + G ++L G ++V G HC
Sbjct: 59 DFIVFKYEAGKDSVLQVTREAYEKCNTTSPKASYTDGNTKVKLDQAGPVYFVSGTEGHCQ 118
Query: 113 SARQMKLVITVLAEGAPAPSPPPS 136
++++LV+ A +P P PS
Sbjct: 119 KGQKLRLVVITPRNSAFSPGPSPS 142
>At1g72230 blue copper protein - like predicted GPI-anchored protein
Length = 181
Score = 65.9 bits (159), Expect = 9e-12
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 35 WTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDII 94
W++ DY+ A K F VGD +VFNY H V +V+ + ++SCT + S+G I
Sbjct: 31 WSLGKDYSSLATGKSFAVGDTIVFNYGAG-HTVDEVSESDYKSCTLGNAISSDSSGTTSI 89
Query: 95 QLKTEGRKWYVCGVADHCSARQMKLVI------------------TVLAEGAPAPS---- 132
LKT G +++CG+ HC+ VI T + +G PS
Sbjct: 90 ALKTPGPHYFICGIPGHCTGGMKLSVIVPAASSGGSTGDGTTDKNTPVQDGKTTPSEGKK 149
Query: 133 PPPSSDAHSVVSSLFGVVMAIMVAIAVIFA 162
PS+ A +V+ L +V+ +VA+ A
Sbjct: 150 ASPSASATAVLKPLDALVVTCVVALMYTLA 179
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.322 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,520,487
Number of Sequences: 26719
Number of extensions: 142586
Number of successful extensions: 621
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 534
Number of HSP's gapped (non-prelim): 65
length of query: 162
length of database: 11,318,596
effective HSP length: 91
effective length of query: 71
effective length of database: 8,887,167
effective search space: 630988857
effective search space used: 630988857
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC126009.4