BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124967.9 - phase: 0
(122 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72430 unknown protein 116 3e-27
At5g20820 putative protein 113 3e-26
At1g17350 hypothetical protein 97 2e-21
At3g12955 unknown protein 61 2e-10
At2g35290 unknown protein 42 6e-05
At3g12830 unknown protein 39 8e-04
At4g34750 putative protein 38 0.001
At3g43120 unknown protein 34 0.020
At1g75580 auxin induced protein, putative 34 0.020
At5g20810 unknown protein 33 0.026
At4g31320 auxin induced like-protein 33 0.026
At1g75590 unknown protein 33 0.026
At2g24400 putative auxin-regulated protein 33 0.044
At5g10990 unknown protein 32 0.075
At1g19840 hypothetical protein 32 0.099
At1g56150 unknown protein 31 0.13
At2g21220 auxin-regulated like protein 31 0.17
At2g36210 unknown protein 30 0.22
At1g16510 auxin-induced like protein 30 0.22
At5g50760 putative protein 30 0.37
>At1g72430 unknown protein
Length = 119
Score = 116 bits (290), Expect = 3e-27
Identities = 61/120 (50%), Positives = 82/120 (67%), Gaps = 3/120 (2%)
Query: 1 MAKGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVT 60
MAK GKL KLKSA+KKW SF K HS S+ A D S ++LH V+VG++RR Y +
Sbjct: 1 MAKVGKLTKLKSAMKKWPSFA--KNHHHSTSSAAVSDELSEDNNLHVVYVGQTRRPYMLR 58
Query: 61 SDVVDNPVFRELVERSRETEQQNDTVNVVACEVVLFEHLLWMLENADPQPESLDELVDFY 120
D++ +P+F+ELV+RS + D VVACEVVLFEHLLWML++ + S++EL +FY
Sbjct: 59 PDIISHPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLKSGQ-EGGSVEELAEFY 117
>At5g20820 putative protein
Length = 127
Score = 113 bits (282), Expect = 3e-26
Identities = 68/131 (51%), Positives = 88/131 (66%), Gaps = 13/131 (9%)
Query: 1 MAKGG-KLMKLKSALKKWNSFGNGK-----QSRHSISAVADEDSSSSRSDLHTVFVGKSR 54
MAKGG KLMKLKS LKK NSF Q+ HS S+ S+ DL TV+VG++R
Sbjct: 1 MAKGGNKLMKLKSVLKKLNSFNTKPNQPPAQTNHSRSSAV---SAFPSEDLQTVYVGRTR 57
Query: 55 RLYRVTSDVVDNPVFRELVERSRETEQQNDTVNVVACEVVLFEHLLWMLENAD---PQPE 111
R Y V+SDVV +P+F++L ++ +++V +CEVVLFEHLLWMLENAD +PE
Sbjct: 58 RTYHVSSDVVSHPLFQQLAAVDGGCGSEDGSISV-SCEVVLFEHLLWMLENADADESRPE 116
Query: 112 SLDELVDFYAC 122
S+ ELV+FYAC
Sbjct: 117 SVYELVEFYAC 127
>At1g17350 hypothetical protein
Length = 348
Score = 97.1 bits (240), Expect = 2e-21
Identities = 56/108 (51%), Positives = 74/108 (67%), Gaps = 3/108 (2%)
Query: 1 MAKGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVT 60
MA GKL KLKSA+KKW S S ++ A + S DLH V+VGKSRR Y ++
Sbjct: 1 MAIFGKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSKCE-DLHVVYVGKSRRPYMLS 59
Query: 61 SDVVDNPVFRELVER-SRETEQQNDTVNV-VACEVVLFEHLLWMLENA 106
S V+ +P+F+EL++R SR E+++D V VACEVVLFEHLLWML+N+
Sbjct: 60 SHVIAHPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNS 107
>At3g12955 unknown protein
Length = 139
Score = 60.8 bits (146), Expect = 2e-10
Identities = 34/92 (36%), Positives = 52/92 (55%), Gaps = 6/92 (6%)
Query: 35 DEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQQNDT----VNVVA 90
D D S + S TV VG++++ Y ++ + +P+ LVE+ + E+ ++ + V
Sbjct: 45 DVDQSPTPSMYQTVLVGRTKKPYLISKKHLKHPLLNALVEKQQRYEEDDNEDGSCIITVK 104
Query: 91 CEVVLFEHLLWMLENADPQP--ESLDELVDFY 120
CEVVLF+HLLWMLE D ESLD+ Y
Sbjct: 105 CEVVLFDHLLWMLEYGDEVHILESLDDFAHLY 136
>At2g35290 unknown protein
Length = 121
Score = 42.4 bits (98), Expect = 6e-05
Identities = 29/81 (35%), Positives = 43/81 (52%), Gaps = 7/81 (8%)
Query: 48 VFVGKSRRLYRVTSDVVDNPVFRELV--ERSRETEQQNDTVNVV---ACEVVLFEHLLWM 102
V VGK ++ + V V++ FR L+ + R + N T VV + +LFEHLLW+
Sbjct: 38 VVVGKEKKEFMVEPYVLEEYPFRVLIGSAKDRAKNRLNRTGRVVWLDHVDSILFEHLLWL 97
Query: 103 LENADPQPESLD--ELVDFYA 121
L N LD E+++FYA
Sbjct: 98 LRNDASTFSDLDVLEIIEFYA 118
>At3g12830 unknown protein
Length = 132
Score = 38.5 bits (88), Expect = 8e-04
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 27 RHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDNPVFRELVERS-RETEQQNDT 85
R S++ + + +SS V+VG + V+++++++PVF L+ RS +E +
Sbjct: 36 RSSVTRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKG 95
Query: 86 VNVVACEVVLFEHLLWMLENADPQPESLDELV 117
V + C V++FE ++ L P P + +L+
Sbjct: 96 VLQIPCHVLVFERIMESLRLGLPVPIDVQDLI 127
>At4g34750 putative protein
Length = 150
Score = 38.1 bits (87), Expect = 0.001
Identities = 28/114 (24%), Positives = 55/114 (47%), Gaps = 14/114 (12%)
Query: 3 KGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSD 62
K G +++++ LK+W Q + I + ++ S V VG++RR Y V +
Sbjct: 6 KIGSVVRIRQMLKQW-------QKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAK 58
Query: 63 VVDNPVFRELVERSRETEQQNDTVNV----VACEVVLFEHLLWMLENADPQPES 112
+++P+FR L+ E E++ NV + C+ LFE ++ ++ + S
Sbjct: 59 HLNHPIFRRLL---AEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSS 109
>At3g43120 unknown protein
Length = 160
Score = 33.9 bits (76), Expect = 0.020
Identities = 33/144 (22%), Positives = 65/144 (44%), Gaps = 31/144 (21%)
Query: 6 KLMKLKSALKKWNSFGNGKQS--------RHS--ISAVADE---DSSSSRSDLHT----- 47
++++LK L+KW + G +S +H+ IS V ++ D + SD T
Sbjct: 14 QIVRLKEILQKWQTVTIGSKSDDGELGARKHTAIISPVINKRLLDLKTCDSDEETTCQSP 73
Query: 48 ------------VFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQ-QNDTVNVVACEVV 94
V+VG R + + ++ + + +F+ L+E++ E + + CEV
Sbjct: 74 EPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVE 133
Query: 95 LFEHLLWMLENADPQPESLDELVD 118
F++LL +EN S ++ V+
Sbjct: 134 TFKYLLKCIENHPKDDTSAEDPVE 157
>At1g75580 auxin induced protein, putative
Length = 108
Score = 33.9 bits (76), Expect = 0.020
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 1 MAKGGKLMK---LKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDL----HTVFVGKS 53
M K KL + +K LK+ +S G KQS V ED + S ++ V+VG++
Sbjct: 3 MKKANKLTQTAMIKQILKRCSSLGK-KQSN-----VYGEDENGSPLNVPKGHFVVYVGEN 56
Query: 54 RRLYRVTSDVVDNPVFRELVERSRET-EQQNDTVNVVACEVVLFEHLLWML 103
R Y V + P F+ L++++ E +D + CE V+F L ML
Sbjct: 57 RVRYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSML 107
>At5g20810 unknown protein
Length = 165
Score = 33.5 bits (75), Expect = 0.026
Identities = 30/131 (22%), Positives = 57/131 (42%), Gaps = 31/131 (23%)
Query: 6 KLMKLKSALKKWNS-----------FGNGKQSRHSISAV------------ADEDSSSSR 42
++++LK L+KW + GKQ+ IS +DE++ S
Sbjct: 14 QIVRLKEILQKWQTVTIGPKSEVPPLAAGKQAVAMISPAINKRLLDVKNGDSDEETCQSP 73
Query: 43 SDLH-------TVFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQQNDT-VNVVACEVV 94
H V+VG R + + + + + +F+ L+E++ E + + + CEV
Sbjct: 74 EPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVE 133
Query: 95 LFEHLLWMLEN 105
F++LL +EN
Sbjct: 134 TFKYLLKCMEN 144
>At4g31320 auxin induced like-protein
Length = 189
Score = 33.5 bits (75), Expect = 0.026
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 35/135 (25%)
Query: 6 KLMKLKSALKKW------------NSFGNGKQSRHSISAVADEDSSSSRSDLHT------ 47
+++KL+ LKKW N N S ++IS + + S S S +
Sbjct: 11 EIVKLQQILKKWRKVAHASKQANNNKIDNVDDSNNNISININNNGSGSGSGSKSIKFLKR 70
Query: 48 ----------------VFVGKSRRLYRVTSDVVDNPVFRELV-ERSRETEQQNDTVNVVA 90
V VGK + Y++ ++ + + F L+ E E + + +
Sbjct: 71 TLSFTDTTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEEFGFEQAGILRIP 130
Query: 91 CEVVLFEHLLWMLEN 105
CEV +FE +L ++E+
Sbjct: 131 CEVAVFESILKIMED 145
>At1g75590 unknown protein
Length = 154
Score = 33.5 bits (75), Expect = 0.026
Identities = 26/102 (25%), Positives = 46/102 (44%), Gaps = 7/102 (6%)
Query: 7 LMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDN 66
+++L+ L++W + + S S D S V+VG S R + V + +++
Sbjct: 14 IVRLRQMLRRWR---DQARMSSSFSRCVPSDVPSGHV---AVYVGSSCRRFVVRATYLNH 67
Query: 67 PVFRE-LVERSRETEQQNDTVNVVACEVVLFEHLLWMLENAD 107
PV R LV+ E N V+ CE +FE + + +D
Sbjct: 68 PVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSD 109
>At2g24400 putative auxin-regulated protein
Length = 178
Score = 32.7 bits (73), Expect = 0.044
Identities = 29/118 (24%), Positives = 52/118 (43%), Gaps = 19/118 (16%)
Query: 6 KLMKLKSALKKW-----------------NSFGNGKQSRHSIS-AVADEDSSSSRSDLHT 47
+++KL+ LKKW NS G G +S + ++ D ++
Sbjct: 11 EIVKLQQLLKKWRKQAIASKAANNNNEDNNSSGGGSKSIKFLKRTLSFTDVTAVPKGYLA 70
Query: 48 VFVGKSRRLYRVTSDVVDNPVFRELV-ERSRETEQQNDTVNVVACEVVLFEHLLWMLE 104
V VG ++ Y + ++ + + F L+ E E Q V + CEV +FE +L ++E
Sbjct: 71 VSVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGVLRIPCEVSVFESILKIME 128
>At5g10990 unknown protein
Length = 148
Score = 32.0 bits (71), Expect = 0.075
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 7 LMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDN 66
++KL+ L++W + R S+ S S V+VG+S R + V + +++
Sbjct: 14 IVKLRQMLRQWRNKARMSSVRRSVP-------SDVPSGHVAVYVGRSCRRFVVLATYLNH 66
Query: 67 PVFRE-LVERSRETEQQNDTVNVVACEVVLFE 97
P+ LV+ E N V+ CE +FE
Sbjct: 67 PILMNLLVKAEEEFGFANQGPLVIPCEESVFE 98
>At1g19840 hypothetical protein
Length = 153
Score = 31.6 bits (70), Expect = 0.099
Identities = 25/107 (23%), Positives = 45/107 (41%), Gaps = 8/107 (7%)
Query: 7 LMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDN 66
+++L+ L++W + K S+S D S V VG R + V + +++
Sbjct: 14 IVRLRQMLRRWRN----KARLSSVSRCVPSDVPSGHV---AVCVGSGCRRFVVRASYLNH 66
Query: 67 PVFREL-VERSRETEQQNDTVNVVACEVVLFEHLLWMLENADPQPES 112
P+ L V+ E N V+ CE +FE + + +D S
Sbjct: 67 PIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSS 113
>At1g56150 unknown protein
Length = 110
Score = 31.2 bits (69), Expect = 0.13
Identities = 16/54 (29%), Positives = 33/54 (60%), Gaps = 1/54 (1%)
Query: 48 VFVGKSRRLYRVTSDVVDNPVFRELVERS-RETEQQNDTVNVVACEVVLFEHLL 100
V+VG + V ++++++PVF L+++S +E + V + C V++FE +L
Sbjct: 45 VYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERIL 98
>At2g21220 auxin-regulated like protein
Length = 104
Score = 30.8 bits (68), Expect = 0.17
Identities = 17/57 (29%), Positives = 31/57 (53%), Gaps = 1/57 (1%)
Query: 48 VFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQQNDTVNV-VACEVVLFEHLLWML 103
V+VG+ R Y V + +P F+ L++++ E N + + + CE V+F L M+
Sbjct: 47 VYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103
>At2g36210 unknown protein
Length = 135
Score = 30.4 bits (67), Expect = 0.22
Identities = 25/120 (20%), Positives = 57/120 (46%), Gaps = 16/120 (13%)
Query: 4 GGKLMKLKSALKKWNSFGN--------GKQSRHSISAVADED------SSSSRSDLHTVF 49
G ++ K+ KK S G +S ++ S + +E +S + + V+
Sbjct: 3 GKRIASFKNLAKKMKSINTTTRSGGEGGSESTYNESLLMNEADEAAMMASKTPTGTFAVY 62
Query: 50 VGKSRRLYRVTSDVVDNPVFRELVERSRETEQ--QNDTVNVVACEVVLFEHLLWMLENAD 107
VG+ R V + +++P+FR L+++S + + + VV C + +F+ ++ +E+ +
Sbjct: 63 VGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLCFEQKVMLVVPCSLSVFQDVVNAVESCN 122
>At1g16510 auxin-induced like protein
Length = 147
Score = 30.4 bits (67), Expect = 0.22
Identities = 15/54 (27%), Positives = 33/54 (60%), Gaps = 1/54 (1%)
Query: 48 VFVGKSRRLYRVTSDVVDNPVFRELVERS-RETEQQNDTVNVVACEVVLFEHLL 100
V+VG+ + V+++++++P+F L+ RS +E V + C V++FE ++
Sbjct: 61 VYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVV 114
>At5g50760 putative protein
Length = 183
Score = 29.6 bits (65), Expect = 0.37
Identities = 18/52 (34%), Positives = 32/52 (60%), Gaps = 3/52 (5%)
Query: 47 TVFVGKSRRLYRVTSDVVDNPVFRELVERSRETE--QQNDTVNVVACEVVLF 96
TV+VG +++ V + ++++P+F+ L+E ETE + D V+ CEV F
Sbjct: 61 TVYVGPTKQRIVVKTKLLNHPLFKNLLE-DAETEYGYRRDGPIVLPCEVDFF 111
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.315 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,835,843
Number of Sequences: 26719
Number of extensions: 104449
Number of successful extensions: 385
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 354
Number of HSP's gapped (non-prelim): 43
length of query: 122
length of database: 11,318,596
effective HSP length: 87
effective length of query: 35
effective length of database: 8,994,043
effective search space: 314791505
effective search space used: 314791505
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)
Medicago: description of AC124967.9