BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124963.14 + phase: 0
(294 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g03110 putative protein 145 3e-35
At2g37100 unknown protein 137 5e-33
At1g22230 hypothetical protein 56 2e-08
At3g15095 unknown protein, 3' partial 44 8e-05
At1g78110 unknown protein 41 9e-04
At3g52710 unknown protein 39 0.004
At5g13970 unknown protein 37 0.016
At5g64910 unknown protein 35 0.048
At5g16500 protein kinase-like protein 35 0.048
At3g58050 putative protein 35 0.063
At2g36220 unknown protein 35 0.063
At3g28770 hypothetical protein 33 0.18
At1g17360 COP1-Interacting Protein 7, putative 33 0.18
At1g14685 unknown protein 33 0.18
At3g19020 hypothetical protein 33 0.24
At3g60110 unknown protein 32 0.31
At1g71500 unknown protein 32 0.31
At1g20920 putative RNA helicase 32 0.31
At1g20310 unknown protein 32 0.31
At3g62900 putative protein 32 0.41
>At5g03110 putative protein
Length = 283
Score = 145 bits (366), Expect = 3e-35
Identities = 110/291 (37%), Positives = 141/291 (47%), Gaps = 49/291 (16%)
Query: 7 KSISSPARTDKFPPPLMRFLRTNAG--------SRSSRRSRSSPMFVLRNKKTIETTQEP 58
+ +SSP R +K+PPP M FLR+ + SRS RSR+SP+FV RNK QEP
Sbjct: 6 RPVSSPGRVEKYPPPFMGFLRSKSNGGSTSRSRSRSRGRSRASPLFVRRNKSAAAVAQEP 65
Query: 59 SSPKVTCMGQVRAKRSSSK----SSTTPTHH---------WWIKKPNPCRCRLVWPKWAF 105
SSPKVTCMGQVR RS K S PT ++ K + WPKW
Sbjct: 66 SSPKVTCMGQVRVNRSKPKIKPESRDNPTRRRCEWLRNASFYNKFAGKIKTMTFWPKWRL 125
Query: 106 --FRRKKPTKPKQDSVKSESNRNSNFTLEDEQRVSVSVESVDNAIVSN---SNCSTPPKN 160
F ++DS +S+ + T E + + +E +N + S +TPP N
Sbjct: 126 CSFSCACRNLKEKDSPRSQLDHP---TTESVREIKEEIEGEENFEIPKLFVSPATTPPIN 182
Query: 161 ALLLTRCRSAPYRSSSLASRFWSSPLRNEEETESTSIDDNEESSSQSQKRESVSDKEDSI 220
ALLLTR RSAPYRSSSLA RFW N+ E E SQ R +D E I
Sbjct: 183 ALLLTRSRSAPYRSSSLAFRFWEE--NNQREVE-----------SQQNVRSEKTDSEVPI 229
Query: 221 GERIGLTKDLENVQELLLKGRVKKEEEDSAVARPVVLTRCKSEPARVSYRI 271
E+I + E V R ++E R VLTR KSEPAR+ ++
Sbjct: 230 -EKINGFHEPEYVD------RDEEEFTKLRFVRQPVLTRSKSEPARIGEKM 273
>At2g37100 unknown protein
Length = 297
Score = 137 bits (346), Expect = 5e-33
Identities = 104/309 (33%), Positives = 141/309 (44%), Gaps = 49/309 (15%)
Query: 1 MKLSTTKSISSPARTDKFPPPLMRFLRTNAGSRSSRRSRSSPMFVLRNKKTIETTQEPSS 60
M+ S+++ +SSP RT+ PP LMRFLRT + SRS RSR F +N TQEP+S
Sbjct: 1 MRFSSSRPVSSPGRTEN-PPLLMRFLRTKSRSRSRSRSRRPIFFRRKNASAAAETQEPTS 59
Query: 61 PKVTCMGQVRAKRSSSKSSTT-------------PTHHWWIKKPNPCRC----------R 97
PKVTCMGQVR RS T W+K PC
Sbjct: 60 PKVTCMGQVRINRSKKPKPETARVSGGATERRRQSRRCGWVKNAFPCHSFTGIIKPTCFS 119
Query: 98 LVWPKWAFFRR----KKPTKPKQDSVKSESNRNSNFTLEDEQRVSVSVESVDNAIVSNSN 153
VW KW F KK K S S E+ + + A S
Sbjct: 120 PVWRKWKSFSHASFSKKSEKRSSSSRSEPIFGRSTVEPEEPEETRKEENQEEEASSCKSF 179
Query: 154 CSTPPKNALLLTRCRSAPYRSSSLASRFWSSPLRNEEETESTSIDDNEESSSQSQKRESV 213
+TPP+NA LLTRCRSAPYRS S A +S ++EET N+ + E+V
Sbjct: 180 TATPPRNAFLLTRCRSAPYRSPSSA----NSLFEDQEET-------NKAPFQRHASSENV 228
Query: 214 SDKEDSIGERIGLTKDLENVQELLLKGRVKKEEEDSAVARP---VVLTRCKSEPAR---- 266
S E+ + +T+ E +++ + +E + S + P ++LTRC SEPAR
Sbjct: 229 SVSEE---PKTSVTETTERLEDSRRESAASEEPKRSVLGSPRQCLILTRCNSEPARLVPE 285
Query: 267 VSYRIDPEV 275
+ YR +P +
Sbjct: 286 MGYRQNPRL 294
>At1g22230 hypothetical protein
Length = 314
Score = 56.2 bits (134), Expect = 2e-08
Identities = 63/270 (23%), Positives = 104/270 (38%), Gaps = 70/270 (25%)
Query: 6 TKSISSPA----RTDKFPPPLMRFLRTNAGSRSSRRSRSSPMFVLRNKKTIETTQEPSSP 61
+KSISSP+ R P + ++ R++R E +EP+SP
Sbjct: 30 SKSISSPSSSFNRRQNAPHHRRSISKLSSSGGGVRQNRGGGR---------EVVEEPTSP 80
Query: 62 KVTCMGQVRAKRSSSKS-----------------STTPTHHWWIKKPN----------PC 94
KVTC GQ++ + S S + + + IK+
Sbjct: 81 KVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIHRSKSESKFFGIKRDVMGFLTCLRDFDF 140
Query: 95 RCRLVWPKWAFFRRKKPTKPKQDSVKSESNRNSN---------FTLEDEQRVSVSVESVD 145
RC +P + +++ E + + + L ++Q V+ +
Sbjct: 141 RCFGAFPPVDIISDDEEEDEEEEEEDEEEDEDESSGTVFSKWLMVLHEKQNNEECVDGKE 200
Query: 146 NAIVSNSNCSTPPKNALLLTRCRSAPYRSSSLASRFWSSPLRNEEETESTSIDDNEESSS 205
N + S+ + PP NALLL RCRSAP ++ WS EE+ E T DN S
Sbjct: 201 N-VFSDVETAVPPPNALLLMRCRSAPVKN-------WS-----EEKKEETEEGDNRVKQS 247
Query: 206 QSQKRESVSDKEDSIGERIGLTKDLENVQE 235
++E+ +R+G KDL ++ E
Sbjct: 248 --------GEEEEEEKDRVGNKKDLRSLME 269
>At3g15095 unknown protein, 3' partial
Length = 417
Score = 44.3 bits (103), Expect = 8e-05
Identities = 35/85 (41%), Positives = 46/85 (53%), Gaps = 14/85 (16%)
Query: 1 MKLSTTKSISSPARTDKFPPPLMRFLRTNAGSRSSRRS-RSSPMFVL-----RNKKTIET 54
M+LS+ KSI SPAR+ L R LRT+ +++ +SPMF R+ E
Sbjct: 41 MRLSS-KSIHSPARSACLTTSLSRRLRTSGSLKNASAGVLNSPMFGANGGRKRSGSGYEN 99
Query: 55 TQ-------EPSSPKVTCMGQVRAK 72
+ EPSSPKVTC+GQVR K
Sbjct: 100 SNNNNNNNIEPSSPKVTCIGQVRVK 124
Score = 40.0 bits (92), Expect = 0.001
Identities = 36/134 (26%), Positives = 56/134 (40%), Gaps = 17/134 (12%)
Query: 120 KSESNRNSNFTLEDEQRVSVSVESVDNAI-VSNSNCSTPPKNALLLTRCRSAPYRSSSLA 178
+ S R F D + + E + V + +PPKNALLL RCRS P + ++LA
Sbjct: 260 RRRSRRRHVFEGLDLSEIEMKTEKKERGEEVGRMSICSPPKNALLLMRCRSDPVKVAALA 319
Query: 179 SRFWSSPLRNEEETESTSIDDNEESSSQSQKRESVSDKEDSIGERIGLTKDLENVQELLL 238
+R L S++D + + +R + E +RI L E +
Sbjct: 320 NRVRERQL---------SLNDGVYTEEEEDERRRRFELEIEDKKRIDLC-------EKWI 363
Query: 239 KGRVKKEEEDSAVA 252
G E E+ +VA
Sbjct: 364 SGETTVETEEVSVA 377
>At1g78110 unknown protein
Length = 342
Score = 40.8 bits (94), Expect = 9e-04
Identities = 49/222 (22%), Positives = 85/222 (38%), Gaps = 47/222 (21%)
Query: 57 EPSSPKVTCMGQVRAKRSSS-----------------KSSTTPTHHWWIKKPN----PCR 95
EP+SPKVTC GQ++ + S + + + + +KK C
Sbjct: 91 EPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIHDNRSQSKFFGLKKDVMGFLTCL 150
Query: 96 CRLVWPKWAF--FRRKKPTKP-----------KQDSVKSESNRNSNFTLEDEQRVSVSVE 142
+ + F FR T +++ V+ E NS V +
Sbjct: 151 RNIKFDFRCFGDFRHADVTSDDDEEEDDDDDEEEEVVEGEEEENSKTVFSKWFMVLQEEQ 210
Query: 143 SVDNAIVSNSNC-------------STPPKNALLLTRCRSAPYRSSSLASRFWSSPLRNE 189
+ + +N+ C + PP NALLL RCRSAP +S +
Sbjct: 211 NNKDDDKNNNKCDEKRDLEDTETEPAVPPPNALLLMRCRSAPAKSWLEERMKVKTEQEKR 270
Query: 190 EETESTSIDDNEESSSQSQKRESVSDKEDSIGERIGLTKDLE 231
EE + +++E+S +++K++ S E+ E + + D E
Sbjct: 271 EEQKEEKETEDQETSMKTKKKDLRSLMEEEKMELVLMRYDTE 312
>At3g52710 unknown protein
Length = 289
Score = 38.5 bits (88), Expect = 0.004
Identities = 24/72 (33%), Positives = 36/72 (49%), Gaps = 2/72 (2%)
Query: 8 SISSPARTDKFPPPLMRFLRTNAGSRSSRRSRSS--PMFVLRNKKTIETTQEPSSPKVTC 65
S+ S A + P P R+ R +R+ P + K+ T EP SPKV+C
Sbjct: 96 SLKSKASIIRLPKPQKTCFNEAKKRRNCRIARTLMIPKRIGSRLKSDPTLSEPCSPKVSC 155
Query: 66 MGQVRAKRSSSK 77
+G+VR+KR S+
Sbjct: 156 IGRVRSKRDRSR 167
>At5g13970 unknown protein
Length = 404
Score = 36.6 bits (83), Expect = 0.016
Identities = 29/109 (26%), Positives = 48/109 (43%), Gaps = 7/109 (6%)
Query: 134 EQRVSVSVESVDNAIVSNSNCSTPPKNALLLTRC------RSAPYRSSSLASRFWSSPLR 187
++ V ++ V ++ S+S S P + L RS S + F S +
Sbjct: 2 DESFRVRIDKVFGSLASSSTSSAPVSSLWCLAEDEIDGNQRSGEKELSESLNSF-SDNGK 60
Query: 188 NEEETESTSIDDNEESSSQSQKRESVSDKEDSIGERIGLTKDLENVQEL 236
E E++ SID+ + SS+ QK D+E I IG+ L+ +EL
Sbjct: 61 QEHESDDLSIDEEKGRSSELQKPSDYDDEEWEIKNSIGMDSTLDMEEEL 109
>At5g64910 unknown protein
Length = 487
Score = 35.0 bits (79), Expect = 0.048
Identities = 26/102 (25%), Positives = 46/102 (44%), Gaps = 6/102 (5%)
Query: 188 NEEETESTSIDDNEESSSQSQKRESVSDKEDSIGERIGLTKDLENVQELLLKGRVK---K 244
NEEE + ++ EE++ + ++ E + K D + K + + L +G+ K K
Sbjct: 92 NEEEAKEDKEEEKEEAAREDKEEEEEAVKPDESASQKEEAKGASSSEPQLRRGKRKRGTK 151
Query: 245 EEEDSAVARPVVLTRCKSEPARVS---YRIDPEVNSNLWKKT 283
E + V+ P R K+ A+ S Y + +LWK T
Sbjct: 152 TEAEKKVSTPRAKKRAKTTKAQASEPEYFEEKRNLEDLWKAT 193
>At5g16500 protein kinase-like protein
Length = 636
Score = 35.0 bits (79), Expect = 0.048
Identities = 23/64 (35%), Positives = 33/64 (50%), Gaps = 2/64 (3%)
Query: 188 NEEETESTSIDDNEESSSQSQK-RESVSDKEDSIGERIGLTKDLENVQELLLK-GRVKKE 245
+++E++S S D EE SQ +K RES S DS ER + + Q L + E
Sbjct: 438 SDDESDSNSEKDQEEEQSQLEKARESSSSSSDSGSERRSIDETNATAQSLKISYSNYSSE 497
Query: 246 EEDS 249
EED+
Sbjct: 498 EEDN 501
Score = 30.8 bits (68), Expect = 0.90
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 142 ESVDNAIVSNSNCSTPPKNALLLTRCRSAPYRSSSLASRFWSSPLRNEEETESTSIDDNE 201
+S+ A+ + +CS P ++R + +SSS SS +EEE + + E
Sbjct: 372 KSMSIALSRHGSCSVTP---FCISR-KDVGNKSSS------SSDSEDEEEEKEQKAEKEE 421
Query: 202 ESSSQ--SQKRESVSDKEDSIGERIGLTKDLENVQELLLKGR--VKKEEEDSAVARPVVL 257
ES+S+ ++ E+ +D +D KD E Q L K R + + R +
Sbjct: 422 ESTSKKRQEQEETATDSDDESDS--NSEKDQEEEQSQLEKARESSSSSSDSGSERRSIDE 479
Query: 258 TRCKSEPARVSY 269
T ++ ++SY
Sbjct: 480 TNATAQSLKISY 491
Score = 30.0 bits (66), Expect = 1.5
Identities = 24/105 (22%), Positives = 50/105 (46%), Gaps = 8/105 (7%)
Query: 122 ESNRNSNFTLEDEQRVSVSVESVDNAIVSNSNCSTPPKNALLLTRCRSAPYRSSSLASRF 181
ES+ +S+ + + + + + + + +S SN S+ ++ L+ S S SR+
Sbjct: 462 ESSSSSSDSGSERRSIDETNATAQSLKISYSNYSSEEEDNEKLSSKSSCKSNEESTFSRY 521
Query: 182 WSSPLRNEEETESTSI-------DDNEESSSQSQKRESVSDKEDS 219
S +++ + +TS+ DD EE ++ + S SD +DS
Sbjct: 522 -DSGRDHDDSSRNTSMRINSLAHDDKEEDEEENHETRSYSDHDDS 565
>At3g58050 putative protein
Length = 1209
Score = 34.7 bits (78), Expect = 0.063
Identities = 37/143 (25%), Positives = 61/143 (41%), Gaps = 20/143 (13%)
Query: 91 PNPCRCRLVWPKWAFFRRKKPTK-PKQDSVKSESNRNSNFTLEDEQRVSVS--------- 140
PNP R + +P K P+ +S + R S F E+ + V+
Sbjct: 829 PNPSTTRDSLHSKQVWEPMEPKKYPRSNSYSEVTVRCSTFKAEEIEDAIVAENSSDLLSQ 888
Query: 141 ---VESVDNAIVSNSNC--STPPKNAL-----LLTRCRSAPYRSSSLASRFWSSPLRNEE 190
E +DN + + N S KN +++ S+ SS L+ ++ N
Sbjct: 889 CKVTEKLDNIKLKDENSMESGETKNGWHLKDPMMSSTSSSDNCSSCLSEGESNTVSSNNG 948
Query: 191 ETESTSIDDNEESSSQSQKRESV 213
TES+S D+E++S QS+ RES+
Sbjct: 949 NTESSSTSDSEDASQQSEGRESI 971
>At2g36220 unknown protein
Length = 263
Score = 34.7 bits (78), Expect = 0.063
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 50 KTIETTQEPSSPKVTCMGQVRAKRSSSK 77
KT + EPSSPKV+C+G+VR++R S+
Sbjct: 139 KTDISLLEPSSPKVSCIGRVRSRRERSR 166
>At3g28770 hypothetical protein
Length = 2081
Score = 33.1 bits (74), Expect = 0.18
Identities = 36/180 (20%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 107 RRKKPTKPKQDSVKSE--SNRNSNFTLEDEQRVSVSVESVDNAIVSNSNCSTPPKNALLL 164
+R++ K +S+ S+ N+ N E+ V V + DN + S +
Sbjct: 630 KREQTQKGHDNSINSKIVDNKGGNADSNKEKEVHVGDSTNDNNMESKED----------- 678
Query: 165 TRCRSAPYRSSSLASRFWSSPLRNEEETESTSIDDNEESSSQSQKRESVSDKEDSIGERI 224
T+ ++ + + N++ E ++ N+ES + S+ +SV DK++
Sbjct: 679 TKSEVEVKKNDGSSEKGEEGKENNKDSMEDKKLE-NKESQTDSKDDKSVDDKQEEAQIYG 737
Query: 225 GLTKDLENVQELLLKGRVKKEEEDSAVARPVVLTRCKSEPARVSYRIDPEVNSNLWKKTR 284
G +KD ++V+ KG+ K+ +E+ R K E + + + +V K+++
Sbjct: 738 GESKDDKSVE---AKGKKKESKENKKTKTNENRVRNKEENVQGNKKESEKVEKGEKKESK 794
Score = 28.1 bits (61), Expect = 5.9
Identities = 16/61 (26%), Positives = 33/61 (53%), Gaps = 8/61 (13%)
Query: 188 NEEETESTSIDDNEESSSQSQKRESVSDKEDSIGERIGLTKDLENVQELLLKGRVKKEEE 247
NEE++E+ I+ ++ ++ K+E S K+ + K+++ +E ++KK EE
Sbjct: 1159 NEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKE----KEMKESEE----KKLKKNEE 1210
Query: 248 D 248
D
Sbjct: 1211 D 1211
Score = 27.7 bits (60), Expect = 7.6
Identities = 32/134 (23%), Positives = 53/134 (38%), Gaps = 18/134 (13%)
Query: 109 KKPTKPKQDSVKSESNRNSNFTLEDEQRVSVSVESVDNAIVSNSNCSTPPKNALLLTRCR 168
K+ KPK D+ +ES+ NS E +V+ V + D + N KN
Sbjct: 520 KEDVKPKVDA--NESDGNSTKERHQEAQVNNGVSTEDKNL-DNIGADEQKKND------- 569
Query: 169 SAPYRSSSLASRFWSSPLRNEEETESTSIDD--NEESSSQSQKRESVSDKEDSIGERIGL 226
+S + + EET+ + + NE ++ K+E D +S+G +
Sbjct: 570 ----KSVEVTTNDGDHTKEKREETQGNNGESVKNENLENKEDKKELKDD--ESVGAKTNN 623
Query: 227 TKDLENVQELLLKG 240
LE +E KG
Sbjct: 624 ETSLEEKREQTQKG 637
>At1g17360 COP1-Interacting Protein 7, putative
Length = 1061
Score = 33.1 bits (74), Expect = 0.18
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 176 SLASRFWSSPLRNEEETESTSIDDNEESSSQSQKRESVSDKEDSIGERIGLTKDLENVQE 235
SL+ R +N TS+D+ S S K + +K++S+ E K + + +
Sbjct: 184 SLSQRRPDLITKNVNTNTRTSVDETNISQQLSTKNDKEENKDESLDES-STVKPIHHTRR 242
Query: 236 LLLKGRV------KKEEEDSAVARPVVLTR 259
L ++ R+ +KE +SA +PVV+ +
Sbjct: 243 LSVQDRINLFESKQKENSNSAGNKPVVVAK 272
>At1g14685 unknown protein
Length = 279
Score = 33.1 bits (74), Expect = 0.18
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 29/109 (26%)
Query: 40 SSPMFVLRNKKTIETTQEPSSPKVTCMGQVRAKRSSSKSSTTPTHHWWIKKPNPCRCRLV 99
S+P + ++T + P + + Q + +++++K+ +TP
Sbjct: 97 SAPSMQMNLHHHLQTEENPVKLEEEIVVQTKKRKTNAKAGSTP----------------- 139
Query: 100 WPKWAFFRRKKPTKPKQDSVKSESNRNSNFTLEDEQRVSVSVESVDNAI 148
+ KKP KPK ++ + +N N+N T RV + +SVD I
Sbjct: 140 -------KAKKPRKPKDENSNNNNNNNTNVT-----RVKPAKKSVDLVI 176
>At3g19020 hypothetical protein
Length = 951
Score = 32.7 bits (73), Expect = 0.24
Identities = 32/114 (28%), Positives = 44/114 (38%), Gaps = 11/114 (9%)
Query: 12 PARTDKFPPPLMRFLRTNAGSRSSRRSRSSPMFVLRNKKTIETTQEPSSPKVTCMGQVRA 71
P T K P P N S + SP + K + EPS+PK
Sbjct: 406 PTPTPKAPEPKKEINPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPSNPK-------EP 458
Query: 72 KRSSSKSSTTPTHHWWIKKPNPCRCRLVWPKWAFFRRKKPTKPKQDSVKSESNR 125
K S K + T KP P + PK + ++P KPK +S K ES++
Sbjct: 459 KPESPKQESPKTEQ---PKPKPESPKQESPKQEAPKPEQP-KPKPESPKQESSK 508
>At3g60110 unknown protein
Length = 644
Score = 32.3 bits (72), Expect = 0.31
Identities = 22/114 (19%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 111 PTKPKQDSVKSESNRNSNFTLEDEQRVSVSVESVDNAIVSNSNCST--PPKNALLLTRCR 168
P K K ++K S +S+ ++++ VS E + + S S+ K ++ +
Sbjct: 431 PCKKKSSALKKTSPSSSSRQKDEKKSQEVSEEKIVTTTATTSARSSRRTSKEIAVVAKDT 490
Query: 169 SAPYRSSSLASRFWSSPLRNEEETESTSIDDNEESSSQSQKRESVSDKEDSIGE 222
+++ + + +TES+ DD+E+ + ++++V+DK+ S+ +
Sbjct: 491 KTGRAKNNIKKQ-------TDTKTESSDDDDDEKEENSKTEKKTVADKKKSVAD 537
>At1g71500 unknown protein
Length = 287
Score = 32.3 bits (72), Expect = 0.31
Identities = 26/87 (29%), Positives = 42/87 (47%), Gaps = 9/87 (10%)
Query: 3 LSTTKSISSPARTDKFPPPLMRFLRTNAGSRSSRRSRSSPMFVLRNKKTIETTQEPSSPK 62
++TT S S P R F P R ++ R +R+ P+++ RN++ T + + K
Sbjct: 1 MATTASSSLP-RNYSFTTP-----RPSSFIRGPPLARTLPLYLRRNRRVALTYRLDQNSK 54
Query: 63 VTCMGQVRAKR---SSSKSSTTPTHHW 86
G VR + SSS S +TP +W
Sbjct: 55 QRSGGNVRCEATEVSSSSSVSTPGRNW 81
>At1g20920 putative RNA helicase
Length = 1166
Score = 32.3 bits (72), Expect = 0.31
Identities = 30/143 (20%), Positives = 55/143 (37%), Gaps = 13/143 (9%)
Query: 108 RKKPTKPKQDSVKSESNRNSNFTLEDEQRVSVSVESVDNAIVSNSNCSTPPKNALLLTRC 167
R++ ++D + E R S E E+ V E D+ + + L R
Sbjct: 174 RREREDGERDRREREKERGSRRNRERERSREVGNEESDDDVKRD-----------LKRRR 222
Query: 168 RSAPYRSSSLASRFWSSPLRNEEETESTSIDDNEESSSQSQKRESVSDKEDSIGERIGLT 227
+ R + R+E+ + S++DN E + + E + D++ + E +
Sbjct: 223 KEGGERKEKEREKSVGRSSRHEDSPKRKSVEDNGEKKEKKTREEELEDEQKKLDEEV--E 280
Query: 228 KDLENVQELLLKGRVKKEEEDSA 250
K VQE R K+E E +
Sbjct: 281 KRRRRVQEWQELKRKKEEAESES 303
>At1g20310 unknown protein
Length = 240
Score = 32.3 bits (72), Expect = 0.31
Identities = 15/29 (51%), Positives = 19/29 (64%)
Query: 45 VLRNKKTIETTQEPSSPKVTCMGQVRAKR 73
V RN K EP+SPKV+C+GQV+ R
Sbjct: 62 VRRNTKYEAVFAEPTSPKVSCIGQVKLAR 90
>At3g62900 putative protein
Length = 1401
Score = 32.0 bits (71), Expect = 0.41
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 13/120 (10%)
Query: 108 RKKPTKPKQDSVKSESNRNSNFTLEDEQRVSVSVESVDNAIVSNSNCST-----PPKNAL 162
RKK K++ S S N ++ + +V N+I + S+ S P+N+
Sbjct: 835 RKKARVRKEEKEPSYSQGNGKLEKKNRSHSKIEYANVQNSIAATSSSSKISDSHKPRNSS 894
Query: 163 LLTRCRSAPYRSSSLASRFWSSPLRNEEETESTSIDDNEESSSQSQKRESVSDKEDSIGE 222
+C +P S S SSP+R + S+ +E S + + S K+ S GE
Sbjct: 895 REAKC--SPVESVS------SSPMRLSNPEKRISVSKKKEESYDANVFAAGSLKKFSDGE 946
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.310 0.124 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,840,869
Number of Sequences: 26719
Number of extensions: 294149
Number of successful extensions: 1692
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 1540
Number of HSP's gapped (non-prelim): 206
length of query: 294
length of database: 11,318,596
effective HSP length: 99
effective length of query: 195
effective length of database: 8,673,415
effective search space: 1691315925
effective search space used: 1691315925
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Medicago: description of AC124963.14