Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC123596.12 - phase: 0 
         (408 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g09630 putative 60S ribosomal protein L1                           684  0.0
At5g02870 60S ribosomal protein - like                                676  0.0
At1g35200 60S ribosomal protein (fragment), putative                  138  5e-33
At3g28510 hypothetical protein                                         35  0.097
At2g02210 putative protein on transposon FARE2.10 (cds3)               32  0.63
At5g33300 putative protein                                             31  1.4
At1g13100 putative cytochrome P450 monooxygenase                       30  2.4
At5g65500 putative protein                                             30  3.1
At5g52840 unknown protein                                              30  3.1
At1g29000 hypothetical protein                                         30  3.1
At2g02200 putative protein on transposon FARE2.10 (cds2)               29  5.3
At1g65010 hypothetical protein                                         29  5.3
At5g65770 nuclear matrix constituent protein 1 (NMCP1)-like            28  7.0
At5g53380 putative protein                                             28  7.0
At5g04740 unknown protein                                              28  7.0
At4g04010 hypothetical protein                                         28  9.1
At3g55720 unknown protein                                              28  9.1
At3g47260 putative protein                                             28  9.1
At2g36910 putative ABC transporter                                     28  9.1
At2g15810 Mutator-like transposase                                     28  9.1

>At3g09630 putative 60S ribosomal protein L1
          Length = 406

 Score =  684 bits (1764), Expect = 0.0
 Identities = 331/405 (81%), Positives = 374/405 (91%)

Query: 4   AAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 63
           AAAAARPLVTIQTL+ +MSTD  +T+ +PDVM A +RPDIVNFVH+ IS NSRQPYAVS+
Sbjct: 2   AAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSK 61

Query: 64  KAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKIN 123
           KAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQAAFGNMCRGGRMFAPT+IWR+WHR++N
Sbjct: 62  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVN 121

Query: 124 VNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGA 183
           VN KR+A+VSAIAA+A+P+LV+ARGH+IE VPE PLVV D+AE VEKT  AIKVLKQ+GA
Sbjct: 122 VNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGA 181

Query: 184 FADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERL 243
           + DAEKAK+S+GIRPGKGKMRNRRYISRKGPL+VYGT+G+K VKAFRN+PGVE+ +VERL
Sbjct: 182 YDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERL 241

Query: 244 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINS 303
           NLLKLAPGGHLGRFVIWTKSAFEKL+SIYG+F+K SEKKKGYVLPRAKMVN+DL RIINS
Sbjct: 242 NLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINS 301

Query: 304 DEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD 363
           DE+QSVV PIKKD KRA LKKNPLKNLNVML+LNPYAKTAKRM+LLAEA+RVK+KKEK  
Sbjct: 302 DEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLA 361

Query: 364 KKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
           KKRK V+KEEA AIKAAGK+WY TM+SDSDY EFDNF+KWLG SQ
Sbjct: 362 KKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406


>At5g02870 60S ribosomal protein - like
          Length = 407

 Score =  676 bits (1745), Expect = 0.0
 Identities = 327/405 (80%), Positives = 370/405 (90%)

Query: 4   AAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 63
           A+AAARPLVT+Q L+ +MSTD   T+ +PDVM A +RPDIVNFVH+ IS NSRQPYAVS+
Sbjct: 3   ASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSK 62

Query: 64  KAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKIN 123
           KAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQAAFGNMCRGGRMFAPT+IWR+WHR++N
Sbjct: 63  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVN 122

Query: 124 VNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGA 183
           VN KR+A+VSAIAA+A+P+LV+ARGH+IE VPE PLVV D+AE VEKT  AIKVLKQ+GA
Sbjct: 123 VNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGA 182

Query: 184 FADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERL 243
           + DAEKAK+S+GIRPGKGKMRNRRYISRKGPL+V+GT+GAK VKAFRN+PGVE+ +VERL
Sbjct: 183 YDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERL 242

Query: 244 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINS 303
           NLLKLAPGGHLGRFVIWTKSAFEKL+SIYG+F+K SEKKKGYVLPRAKMVN+DL RIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINS 302

Query: 304 DEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD 363
           DEVQSVV PIK   KRA LKKNPLKNLNVM +LNPYAKTAKRM+LLAEA RVK+KKEK +
Sbjct: 303 DEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLE 362

Query: 364 KKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
           KKRK+V+KEEA AIKAAGKAWY TM+SDSDY EFDNF+KWLG SQ
Sbjct: 363 KKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407


>At1g35200 60S ribosomal protein (fragment), putative
          Length = 93

 Score =  138 bits (348), Expect = 5e-33
 Identities = 67/96 (69%), Positives = 81/96 (83%), Gaps = 3/96 (3%)

Query: 313 IKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKKRKIVSKE 372
           +KKDVKR  + KNP  NLN+M++LNPYAKT+KRM+LLAEA+RVK+KKEK   K K +SKE
Sbjct: 1   MKKDVKRGVIMKNPSNNLNLMVKLNPYAKTSKRMSLLAEAQRVKAKKEK---KSKPISKE 57

Query: 373 EASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
           EA  I++AGK+WY TM+SDSDY EFDNFSKWLG SQ
Sbjct: 58  EAMKIRSAGKSWYKTMISDSDYPEFDNFSKWLGSSQ 93


>At3g28510 hypothetical protein
          Length = 530

 Score = 34.7 bits (78), Expect = 0.097
 Identities = 22/61 (36%), Positives = 30/61 (49%)

Query: 313 IKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKKRKIVSKE 372
           IK+ VK    +K   + L          K AK+M    EAE  K K E+ +KK K+ +KE
Sbjct: 450 IKRLVKTLEEEKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKKKKTEEDEKKEKVKAKE 509

Query: 373 E 373
           E
Sbjct: 510 E 510


>At2g02210 putative protein on transposon FARE2.10 (cds3)
          Length = 684

 Score = 32.0 bits (71), Expect = 0.63
 Identities = 18/64 (28%), Positives = 32/64 (49%)

Query: 313 IKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKKRKIVSKE 372
           ++KD KR +  +N  K +   +      KT K+  + +    V ++KE   KKRKI+  +
Sbjct: 368 VQKDKKRVSRGRNENKRVKASVHAEDNLKTRKQKQVDSADVDVPTRKEAQSKKRKIIGND 427

Query: 373 EASA 376
             +A
Sbjct: 428 GDNA 431


>At5g33300 putative protein
          Length = 439

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/76 (27%), Positives = 42/76 (54%), Gaps = 6/76 (7%)

Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRL-----NPYAKTA-KRMALLAEAERVKSKK 359
           ++  V  +KK+++++  +K+ L  LN   +L     N  A TA KR+ +L +++++ S K
Sbjct: 131 LEKEVLQLKKELRKSEFEKHVLSALNNRQKLILQLKNTQALTALKRLKMLLQSKKISSNK 190

Query: 360 EKFDKKRKIVSKEEAS 375
           +K   K      +E+S
Sbjct: 191 KKGPSKGTSSEIQESS 206


>At1g13100 putative cytochrome P450 monooxygenase
          Length = 490

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 250 PGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVL-PRAKMVNSDLTRIINSDEVQS 308
           PGG +GRF+ W     ++ D+++   D   +    Y L P  K+ +S       SD +  
Sbjct: 217 PGG-IGRFIDWISGQNKRFDNVFSDLDTFFQNILDYHLKPGRKVADS-------SDIIDV 268

Query: 309 VVRPIKKDVK 318
           V+  IKK  K
Sbjct: 269 VINMIKKQEK 278


>At5g65500 putative protein
          Length = 765

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 34/159 (21%), Positives = 64/159 (39%), Gaps = 21/159 (13%)

Query: 239 NVERLNLLKLAPG---GHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAK-MVN 294
           N ER N  + A       +G F  W K   E+ + +  T D   E      +  AK  V 
Sbjct: 269 NAERSNRAEWAISLCNSRIGEFEAWIKEESERREKLQATLDSDKE-----CIEEAKNYVE 323

Query: 295 SDLTRIINSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAER 354
              T++ +  E+Q V+    K +  A  +        V+          +R  ++ E E+
Sbjct: 324 KGKTKLHSLAELQEVLSSKVKTMMEAKSQAEVELERVVL----------QRGEMITEIEK 373

Query: 355 VKSKKEKFDKKRKIVSKEE--ASAIKAAGKAWYNTMVSD 391
           ++S+++ F+++ +   + E   S  K   K  Y   V++
Sbjct: 374 LRSQRDVFNRRIEFCKEREVIGSVSKEEVKCGYREYVAE 412


>At5g52840 unknown protein
          Length = 169

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 20/70 (28%), Positives = 38/70 (53%), Gaps = 3/70 (4%)

Query: 306 VQSVVRPIKKDVKRAT--LKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD 363
           ++++ RP+   VK+ T  +  + + N   +L ++ Y+KT K +  + E E  +   E F 
Sbjct: 3   LRAIGRPLLAKVKQTTGIVGLDVVPNARAVL-IDLYSKTLKEIQAVPEDEGYRKAVESFT 61

Query: 364 KKRKIVSKEE 373
           ++R  V KEE
Sbjct: 62  RQRLNVCKEE 71


>At1g29000 hypothetical protein
          Length = 287

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 17/54 (31%), Positives = 25/54 (45%)

Query: 271 IYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDEVQSVVRPIKKDVKRATLKK 324
           I+   +K S+KK   + P+   V    T    +  V+     IKKDV R T+ K
Sbjct: 65  IHKQIEKWSKKKVELISPKPSEVKKTTTTTTTTSVVEKKTTEIKKDVIRTTVLK 118


>At2g02200 putative protein on transposon FARE2.10 (cds2)
          Length = 586

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 43/176 (24%)

Query: 237 ITNVERLN---LLKLAPG--GHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVL---- 287
           +T V+R+    LL+   G  G +    IW  S+ +KL   +GT D+ S      +L    
Sbjct: 56  VTEVKRIGNDYLLRKQYGLFGFVQSIQIWALSSVQKLGEKFGTRDESSSGNIPLILQWRS 115

Query: 288 ---PRAKMVNSDLTRIINSDEVQ----------------SVVRPIKKDVKRATLK----- 323
              P AK +    T I + D+V+                S   P  KD+KR ++      
Sbjct: 116 TSSPSAKAI----TMIADGDKVEVTPIVGVHNHEYEHLVSQKNPEDKDLKRKSMSFGEKV 171

Query: 324 KNPLKNLNVML----RLNPYAKTAKRMALLAEAERVK--SKKEKFDKKRKIVSKEE 373
           K   +N  V+     RL  Y    +  A     E+ +   KKE+ ++K++   KEE
Sbjct: 172 KLVYENCEVLKKKVGRLEGYLGIERVPASYTREEQKEEDEKKEQEEEKQEEEGKEE 227


>At1g65010 hypothetical protein
          Length = 1318

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)

Query: 267 KLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDEVQSVVRPIKKDVKRATLKKNP 326
           KL SI    +   EK+ GY+    ++  ++ +   N  ++QS+V+  K   +R       
Sbjct: 673 KLQSIVQESEDLKEKEAGYLKKIEELSVANESLADNVTDLQSIVQESKDLKEREVAYLKK 732

Query: 327 LKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKKRKIVSKEEASAI 377
           ++ L+V    +   K  K   +  EAE ++ ++    KK + +SKE  + +
Sbjct: 733 IEELSV-ANESLVDKETKLQHIDQEAEELRGREASHLKKIEELSKENENLV 782


>At5g65770 nuclear matrix constituent protein 1 (NMCP1)-like
          Length = 1042

 Score = 28.5 bits (62), Expect = 7.0
 Identities = 24/73 (32%), Positives = 37/73 (49%), Gaps = 14/73 (19%)

Query: 314 KKDVKRATLKKNPLKN-------LNVMLRLNPYAKTAKRMALLAEAERVKSKKEKF---- 362
           +K V  AT K   LK+       L + L+       A+++ +LAEA+R+K +K KF    
Sbjct: 503 RKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVEKAKFEAEW 562

Query: 363 ---DKKRKIVSKE 372
              D KR+ + KE
Sbjct: 563 EHIDVKREELRKE 575


>At5g53380 putative protein
          Length = 483

 Score = 28.5 bits (62), Expect = 7.0
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 293 VNSDLTRIINSDEVQSVVRPIKK-----DVKRATLKKNPLKNLNVMLRLNPYAKTAKRMA 347
           +N D    ++    +  + P+ K     D+    +K +  + + VM   +  A     M+
Sbjct: 94  INKDGDGFVDDYVSRLTLSPLDKSKPLWDIHILNVKTSDAEAVGVMRCHHSLADGMSLMS 153

Query: 348 LLAEAERVKSKKEKFDKKRKIVSKEEASAIKAAGKAWYNTMVSDSDYA 395
           LL    R  S  E F     I  +E+  + +   K WY+  ++   YA
Sbjct: 154 LLVACTRKTSNLESFPTIPAIKRREQMMSHRFGNKGWYSRSINAVYYA 201


>At5g04740 unknown protein
          Length = 301

 Score = 28.5 bits (62), Expect = 7.0
 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 5/128 (3%)

Query: 123 NVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVG 182
           ++  + YA +++I ++A PS    +    + V   P+V+ D     E T   +    ++G
Sbjct: 62  SIKNRVYASINSIDSAATPSY--PKSEDDDDVVPMPMVMIDQDADPEATIVQLSFGNRLG 119

Query: 183 AFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVER 242
           A  D  +A   LG+   KG +     I ++    +   D  + V+    +  + +T +  
Sbjct: 120 ALIDTMRALKDLGLDVIKGTVSTEGSI-KQTKFSITKRDTGRKVEDPDLLEQIRLTIIN- 177

Query: 243 LNLLKLAP 250
            NLLK  P
Sbjct: 178 -NLLKYHP 184


>At4g04010 hypothetical protein
          Length = 836

 Score = 28.1 bits (61), Expect = 9.1
 Identities = 18/70 (25%), Positives = 34/70 (47%), Gaps = 6/70 (8%)

Query: 313 IKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAE------RVKSKKEKFDKKR 366
           ++KD KR +  +N  K +   +      KT K++    + +       V+++KE   KKR
Sbjct: 479 VQKDKKRVSRGRNENKRVKPSVHAEDNLKTRKQVPRKRQKQVDSADVDVQTRKEAQSKKR 538

Query: 367 KIVSKEEASA 376
           KI+  +  +A
Sbjct: 539 KIIGNDGDNA 548


>At3g55720 unknown protein
          Length = 438

 Score = 28.1 bits (61), Expect = 9.1
 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 14/88 (15%)

Query: 177 VLKQVGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVE 236
           ++KQ  A A  E A D++      GK++          + V     AK +   R    V 
Sbjct: 110 IVKQYTAAAGGEMALDAVESMYAMGKVK----------MGVTEFCAAKTLNGKRKKKMVR 159

Query: 237 ITNVERLNLLKLAPGGHLGRFVIWTKSA 264
           I NV   N      GG +G FV+W K +
Sbjct: 160 IRNVNNNN----GNGGEMGGFVLWKKGS 183


>At3g47260 putative protein
          Length = 820

 Score = 28.1 bits (61), Expect = 9.1
 Identities = 18/70 (25%), Positives = 33/70 (46%), Gaps = 6/70 (8%)

Query: 313 IKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAE------RVKSKKEKFDKKR 366
           ++KD KR +  +N  K +   +      KT K+M    + +       + ++KE   KKR
Sbjct: 507 VQKDKKRVSRGRNENKRVKPSVHAEDNFKTRKQMPRKRQKQVDSADVDIPTRKEAQSKKR 566

Query: 367 KIVSKEEASA 376
           KI+  +  +A
Sbjct: 567 KIIGNDGDNA 576


>At2g36910 putative ABC transporter
          Length = 1286

 Score = 28.1 bits (61), Expect = 9.1
 Identities = 11/40 (27%), Positives = 22/40 (54%)

Query: 7    AARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNF 46
            A R +  +   ++E+  D P+T P+PD +R  +    ++F
Sbjct: 992  AMRSVFELLDRKTEIEPDDPDTTPVPDRLRGEVELKHIDF 1031


>At2g15810 Mutator-like transposase
          Length = 545

 Score = 28.1 bits (61), Expect = 9.1
 Identities = 15/49 (30%), Positives = 23/49 (46%)

Query: 48  HSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQ 96
           H ++   ++  +  +  A   T A   GTGRA  R PRV  G    +G+
Sbjct: 465 HPHVLMTAQAAHGQTMTARFLTRANQTGTGRARGRPPRVKNGEGKNSGK 513


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.316    0.131    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,572,508
Number of Sequences: 26719
Number of extensions: 355415
Number of successful extensions: 1295
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1276
Number of HSP's gapped (non-prelim): 28
length of query: 408
length of database: 11,318,596
effective HSP length: 102
effective length of query: 306
effective length of database: 8,593,258
effective search space: 2629536948
effective search space used: 2629536948
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)


Medicago: description of AC123596.12