
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122169.1 + phase: 0 /pseudo
(459 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g41190 unknown protein 440 e-124
At2g39130 unknown protein 322 3e-88
At3g54830 putative protein 305 3e-83
At5g02180 unknown protein 300 8e-82
At5g02170 unknown protein 296 2e-80
At3g09340 hypothetical protein 286 2e-77
At3g09330 hypothetical protein 282 3e-76
At5g15240 unknown protein 247 8e-66
At3g28960 hypothetical protein 201 9e-52
At5g16740 putative protein 179 2e-45
At3g11900 putative amino acid transporter protein 84 1e-16
At1g61270 amino acid permease 70 3e-12
At5g65990 amino acid transporter protein-like 69 5e-12
At3g01760 putative amino acid permease 67 2e-11
At5g40780 amino acid permease 60 3e-09
At1g49370 hypothetical protein 60 3e-09
At4g38250 putative amino acid transport protein 58 1e-08
At1g67640 putative amino acid permease 52 7e-07
At3g30390 unknown protein 49 4e-06
At5g38820 transporter -like protein 49 6e-06
>At2g41190 unknown protein
Length = 536
Score = 440 bits (1132), Expect = e-124
Identities = 231/425 (54%), Positives = 290/425 (67%), Gaps = 37/425 (8%)
Query: 7 DKN--KEKENDYFLDANEDETDIE--AVNYDSDSSNNNDD--------DDEDDRIATHRP 54
DKN KEK+ D + +ED D+E + Y++DS + D D DD I
Sbjct: 3 DKNNDKEKKTDVTFEDDEDNEDLEDNSSKYENDSETDQSDLGDLPGDAVDRDDDI----D 58
Query: 55 ESFTSQ-QWPQSYNEALDPLTIAAAPNIGSVLRAPSVIYASFAAGRSSKSYLELQDGF-- 111
E F SQ QWPQS+ E D TIAA+P GS+ P Y R+S+S L+++
Sbjct: 59 EPFISQVQWPQSFRETTDSYTIAASPIFGSLRSNPPSFY------RASRSNLDVESKAPL 112
Query: 112 -------LTGTQIQESTWWEKASIQKNIPEELPIG-YGCTFTQTIFNGLNVLAGVGLLSA 163
+S W K S EELPIG YGC+ QTIFN +NV+AGVGLLS
Sbjct: 113 LPERHDDSDKASATQSAWSHKGSFA----EELPIGGYGCSVIQTIFNAINVMAGVGLLST 168
Query: 164 PDTVKQAGWASLLVIVVFAVVCFYTAELMRHCFQSREGIISYPDIGEAAFGKYGRVFISI 223
P TVK+AGWAS++++++FAV+C YTA LM+ CF+++ GII+YPDIGEAAFGKYGR+ I +
Sbjct: 169 PYTVKEAGWASMVILLLFAVICCYTATLMKDCFENKTGIITYPDIGEAAFGKYGRILICM 228
Query: 224 VLYTELYSYCVEFIIMEGDNLSGLFPGTSLHWGSLNLDGKHLFAILAALIILPTVWLKDL 283
+LYTELYSYCVEFII+EGDNL+GLFPGTSL LD KHLF IL ALI+LPTVWLKDL
Sbjct: 229 LLYTELYSYCVEFIILEGDNLTGLFPGTSLDLLGFRLDSKHLFGILTALIVLPTVWLKDL 288
Query: 284 RFVSYLSAGGVVGTALVGACVYAVGTRKDVGFHHTAPLVNWSGVPFAFGIYGFCFAGHSV 343
R +SYLSAGGV+ TAL+ V+ +GT +GFHHT V W+G+PFA GIYGFC++GHSV
Sbjct: 289 RIISYLSAGGVIATALIAVSVFFLGTTGGIGFHHTGQAVKWNGIPFAIGIYGFCYSGHSV 348
Query: 344 FPNIYQSMANKKDFTKAMLICFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPRDAFASK 403
FPNIYQSMA+K F KA++ CF++ V LYG V G+LMFGE T SQITL++P+D F SK
Sbjct: 349 FPNIYQSMADKTKFNKAVITCFIICVLLYGGVAIMGYLMFGEATLSQITLNMPQDQFFSK 408
Query: 404 VSLWT 408
V+ WT
Sbjct: 409 VAQWT 413
>At2g39130 unknown protein
Length = 550
Score = 322 bits (825), Expect = 3e-88
Identities = 162/421 (38%), Positives = 248/421 (58%), Gaps = 26/421 (6%)
Query: 13 ENDYFLDANEDETDIEAVNYDSDSSNNNDDDDEDDRIATHRPESFTSQQWPQSYNEALDP 72
+ +++++ +++ + V D S +++ DD D+ A +P S+T+ WPQSY +++D
Sbjct: 7 DQSFYIESEDEDDRKDYVEEDGGSHSDSSDDVYDENQAHIKPSSYTTA-WPQSYRQSIDL 65
Query: 73 LTIAAAPNIG-----SVLRAPSVIYASFAAGRSSKSYLELQDGFLTGTQIQESTWWE--- 124
+ +P IG S+ R S +S R + L L Q E +
Sbjct: 66 YSSVPSPGIGFLGNNSMTRFGSSFLSSGLIRRHTPESLPTVTKPLLEEQADEQALPKHRL 125
Query: 125 ------------KASIQKN-----IPEELPIGYGCTFTQTIFNGLNVLAGVGLLSAPDTV 167
+ S++K+ + E+P+ ++ Q + NGLNVL GVG+LS P
Sbjct: 126 SSQGLLSPIPSRRGSMRKDEKSSMVSHEIPMSRNSSYGQAVLNGLNVLCGVGILSTPYAA 185
Query: 168 KQAGWASLLVIVVFAVVCFYTAELMRHCFQSREGIISYPDIGEAAFGKYGRVFISIVLYT 227
K+ GW L+++ V+ ++ FYT L+R+C S + +YPDIG+AAFG GR+F+SIVLY
Sbjct: 186 KEGGWLGLMILFVYGLLSFYTGILLRYCLDSESDLETYPDIGQAAFGTTGRIFVSIVLYL 245
Query: 228 ELYSYCVEFIIMEGDNLSGLFPGTSLHWGSLNLDGKHLFAILAALIILPTVWLKDLRFVS 287
ELY+ CVE+II+E DNLS L+P +L G LD +HLFA+L L +LPTVWL+DL +S
Sbjct: 246 ELYACCVEYIILESDNLSSLYPNAALSIGGFQLDARHLFALLTTLAVLPTVWLRDLSVLS 305
Query: 288 YLSAGGVVGTALVGACVYAVGTRKDVGFHHTAPLVNWSGVPFAFGIYGFCFAGHSVFPNI 347
Y+SAGGV+ + LV C++ +G +VG H +N S +P A G+YG+C++GH+VFPNI
Sbjct: 306 YISAGGVIASVLVVLCLFWIGLVDEVGIHSKGTTLNLSTLPVAIGLYGYCYSGHAVFPNI 365
Query: 348 YQSMANKKDFTKAMLICFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPRDAFASKVSLW 407
Y SMA + +L CF + +Y V G+ MFGE T SQ TL+LP+D A+K+++W
Sbjct: 366 YTSMAKPSQYPAVLLTCFGICTLMYAGVAVMGYTMFGESTQSQFTLNLPQDLIATKIAVW 425
Query: 408 T 408
T
Sbjct: 426 T 426
>At3g54830 putative protein
Length = 571
Score = 305 bits (782), Expect = 3e-83
Identities = 157/398 (39%), Positives = 228/398 (56%), Gaps = 24/398 (6%)
Query: 35 DSSNNNDDDDEDDRIATHRPESFTSQQ------------WPQSYNEALDPLTIAAAPNIG 82
D + DD++DD + +++ Q WP+SY +++D +PN+G
Sbjct: 19 DERKHLSDDEDDDGTLSDTSDAYNQNQHHLSKASPYSTAWPKSYRQSIDMFGSVPSPNLG 78
Query: 83 -----SVLRAPSVIYASFAAGRSSKSYLE------LQDGFLTGTQIQ-ESTWWEKASIQK 130
S+ R S +S R + L L+D ++ S K S
Sbjct: 79 FLANSSMSRRGSSFMSSTLTRRHTPESLPCVTKPLLEDEEAPKHKLSTHSLLPSKPSSSM 138
Query: 131 NIPEELPIGYGCTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFAVVCFYTAE 190
+ ++ I +F Q + NG+NVL GVG+LS P VK+ GW L+++ F ++CFYT
Sbjct: 139 VVSHDMGISNDSSFGQAVLNGVNVLCGVGILSTPYAVKEGGWLGLIILFAFGILCFYTGL 198
Query: 191 LMRHCFQSREGIISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLFPG 250
L+R+C S + +YPDIG AAFG GR+ +S++LY ELY+ VE+II+EGDNLS +FP
Sbjct: 199 LLRYCLDSHPDVQTYPDIGHAAFGSTGRILVSVILYMELYAMSVEYIILEGDNLSSMFPN 258
Query: 251 TSLHWGSLNLDGKHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALVGACVYAVGTR 310
SL G +LD LFA+L L +LPTVWL+DL +SY+SAGGV+ + LV C++ VG
Sbjct: 259 ASLSIGGFHLDAPRLFALLTTLAVLPTVWLRDLSVLSYISAGGVIASVLVVLCLFWVGLV 318
Query: 311 KDVGFHHTAPLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAMLICFVLPVF 370
DVG H +N + +P + G+YG+C++GH VFPNIY SMA F+ +L F +
Sbjct: 319 DDVGIHSKGTPLNLATLPVSVGLYGYCYSGHGVFPNIYTSMAKPSQFSAVLLASFGICTL 378
Query: 371 LYGSVGAAGFLMFGERTSSQITLDLPRDAFASKVSLWT 408
+Y V G+ MFGE T SQ TL+LP+D ASK++LWT
Sbjct: 379 MYAGVAVMGYSMFGESTESQFTLNLPQDLVASKIALWT 416
>At5g02180 unknown protein
Length = 550
Score = 300 bits (769), Expect = 8e-82
Identities = 162/413 (39%), Positives = 239/413 (57%), Gaps = 20/413 (4%)
Query: 11 EKENDYFLDANEDETDIEAVNYDSDSSNNNDDDDEDDRIATHRPESFTSQ----QWPQSY 66
++EN L ++DE D D D ++ D ++ R ++ S WPQSY
Sbjct: 19 DEENQAALACSDDEHD-----GDDDGRRGGENSDSSSPLSRDRSDNNLSDVSNPPWPQSY 73
Query: 67 NEALDPLTIAAAPNIGSVLRAPSVIYASFAAGRSSKSYLELQDGFLTGTQIQESTWWEKA 126
+++D LT P++ + ++ S AS + S+ + + + + ++
Sbjct: 74 RQSMDLLTGMTPPSVSFMPQSSSRRLASSFQKKQQSSFCDSLSSSSSKPLLSQPVPDKEE 133
Query: 127 SIQKNIPEE----------LPIGYGCTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASLL 176
+I P+ LP C+F+Q++ NG NVL G+GL++ P +K++GW L
Sbjct: 134 TILPVNPQSQLKLSVTDLPLPEPNLCSFSQSVLNGTNVLCGLGLITMPYAIKESGWLGLP 193
Query: 177 VIVVFAVVCFYTAELMRHCFQSREGIISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEF 236
+++ F V+ YT LM+ C +S GI +YPDIG+AAFG GR ISI+LY ELY+ CVE+
Sbjct: 194 ILLFFGVITCYTGVLMKRCLESSPGIQTYPDIGQAAFGITGRFIISILLYVELYAACVEY 253
Query: 237 IIMEGDNLSGLFPGTSLHWGS-LNLDGKHLFAILAALIILPTVWLKDLRFVSYLSAGGVV 295
IIM DNLSGLFP SL S ++LD +FAIL L++LPTVWLKDL +SYLS GGV+
Sbjct: 254 IIMMSDNLSGLFPNVSLSIASGISLDSPQIFAILTTLLVLPTVWLKDLSLLSYLSVGGVL 313
Query: 296 GTALVGACVYAVGTRKDVGFHHTAPLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKK 355
+ L+G C++ VG +GFH T + + S +P GI+GF ++GHSVFPNIY SM +
Sbjct: 314 ASILLGICLFWVGAVDGIGFHATGRVFDLSNLPVTIGIFGFGYSGHSVFPNIYSSMKDPS 373
Query: 356 DFTKAMLICFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPRDAFASKVSLWT 408
F ++ICF LY +V G+ MFGE SQ TL++P+ F SKV++WT
Sbjct: 374 RFPLVLVICFSFCTVLYIAVAVCGYTMFGEAVESQFTLNMPKHFFPSKVAVWT 426
>At5g02170 unknown protein
Length = 526
Score = 296 bits (757), Expect = 2e-80
Identities = 153/384 (39%), Positives = 225/384 (57%), Gaps = 17/384 (4%)
Query: 41 DDDDEDDRIATHRPESFTSQQ--------WPQSYNEALDPLTIAAAPNIGSVL-----RA 87
D++DE+ + + P + S+ WP+SY +++D LT P S + R
Sbjct: 19 DEEDEESQTESSVPSTPLSRNRSEDVPVPWPRSYRQSMDLLTGVTPPTSTSFVSSFRQRR 78
Query: 88 PSVIYASFAAGRSSKSYLELQDGFLTGTQIQESTWWEKASIQKNIPEELPI---GYGCTF 144
S ++ SF + SK L + + + + + + +Q ++P +L CTF
Sbjct: 79 QSSVFGSFTSS-PSKQQLLIDKDEIQSSVVSSIKSFLASHLQLSVPGDLLTPQENRSCTF 137
Query: 145 TQTIFNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFAVVCFYTAELMRHCFQSREGIIS 204
+Q++ NG+NVL GV LL+ P VK+ GW L ++ F ++ FYT L++ C ++ GI +
Sbjct: 138 SQSVLNGINVLCGVALLTMPYAVKEGGWLGLFILFSFGIITFYTGILLKRCLENSPGIHT 197
Query: 205 YPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLFPGTSLHWGSLNLDGKH 264
YPDIG+AAFG GR+ +SI+LY ELY+ CVE+IIM DNLS +FP TSL+ +LD
Sbjct: 198 YPDIGQAAFGTTGRILVSILLYVELYASCVEYIIMMSDNLSRMFPNTSLYINGFSLDSTQ 257
Query: 265 LFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALVGACVYAVGTRKDVGFHHTAPLVNW 324
+FAI LI+LPTVWLKDL +SYLSAGGV+ + L+ C++ G+ VGFH + ++
Sbjct: 258 VFAITTTLIVLPTVWLKDLSLLSYLSAGGVISSILLALCLFWAGSVDGVGFHISGQALDI 317
Query: 325 SGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAMLICFVLPVFLYGSVGAAGFLMFG 384
+ +P A GIYGF F HSVFPNIY SM F +LI F Y +V GF MFG
Sbjct: 318 TNIPVAIGIYGFGFGSHSVFPNIYSSMKEPSKFPTVLLISFAFCTLFYIAVAVCGFTMFG 377
Query: 385 ERTSSQITLDLPRDAFASKVSLWT 408
+ SQ TL++P +SK+++WT
Sbjct: 378 DAIQSQFTLNMPPHFTSSKIAVWT 401
>At3g09340 hypothetical protein
Length = 478
Score = 286 bits (731), Expect = 2e-77
Identities = 159/408 (38%), Positives = 235/408 (56%), Gaps = 20/408 (4%)
Query: 10 KEKENDYFLDANEDETDIEAVNYDSDSSNNNDDDDEDDRIATHRPESFTSQQWPQSYNEA 69
+E+E D + ++D+ + D S NDDDD + + + +S WPQSY +
Sbjct: 4 EEQERDILIQTDDDDCHV-------DVSYVNDDDDSNASFSLSQNDSAF---WPQSYRHS 53
Query: 70 LDPLTIAAAPNIGSVL-RAPSVIYASFAAGRSSKSYLELQDGFLTGTQIQ----ESTWWE 124
+D LT P + + R+ ++S A + + + F++ T Q E
Sbjct: 54 VDLLTGVTPPMVSFIQGRSTETSFSSSIASLYKRRPTSIANSFVSSTSKQPLLSEKDDVS 113
Query: 125 KASIQKNIPEELPIGYG----CTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASLLVIVV 180
S Q + + YG C+F Q++ NG+NVL G+ LL+ P VK+ GW L +++
Sbjct: 114 FLSSQVGL-SNTDLSYGEPNFCSFPQSVLNGINVLCGISLLTMPYAVKEGGWLGLCILLS 172
Query: 181 FAVVCFYTAELMRHCFQSREGIISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIME 240
FA++ YT L++ C +S + +YPDIG+AAFG GR+ ISI+LY ELY CVE+IIM
Sbjct: 173 FAIITCYTGILLKRCLESSSDLRTYPDIGQAAFGFTGRLIISILLYMELYVCCVEYIIMM 232
Query: 241 GDNLSGLFPGTSLHWGSLNLDGKHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALV 300
DNLS +FP +L+ ++LD +FAI A LI+LPTVWLKDL +SYLSAGGV + L+
Sbjct: 233 SDNLSRVFPNITLNIVGVSLDSPQIFAISATLIVLPTVWLKDLSLLSYLSAGGVFVSILL 292
Query: 301 GACVYAVGTRKDVGFHHTAPLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKA 360
C++ VG+ VGFH ++ + +P A GI+GF F+GH+V P+IY SM F
Sbjct: 293 ALCLFWVGSVDGVGFHTGGKALDLANLPVAIGIFGFGFSGHAVLPSIYSSMKEPSKFPLV 352
Query: 361 MLICFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPRDAFASKVSLWT 408
+LI F VF Y +V G+ MFGE SQ TL++P+ ASK+++WT
Sbjct: 353 LLISFGFCVFFYIAVAICGYSMFGEAIQSQFTLNMPQQYTASKIAVWT 400
>At3g09330 hypothetical protein
Length = 481
Score = 282 bits (721), Expect = 3e-76
Identities = 159/400 (39%), Positives = 229/400 (56%), Gaps = 9/400 (2%)
Query: 18 LDANEDETDIEAVNYDSDSSNNNDDDDEDDRIATHRPESFT-SQQWPQSYNEALDPLTIA 76
++ E E DI D + + DDEDD +++ S S WP+SY +++D LT
Sbjct: 1 MELEEQERDILFPTDDEECQVDVSCDDEDDDSSSYSSLSQNDSAPWPRSYRQSVDILTGV 60
Query: 77 AAPNIGSVLRAPS-VIYASFAAGRSSKSYLELQDGFLTGTQIQE--STWWEKASIQKNIP 133
P I + R S + S A + + + F + T Q S + + I
Sbjct: 61 TPPTISFIHRRSSQTSFTSSVASLYKRRPTSIANSFASSTSKQPLLSEKDDVLFLSSQIG 120
Query: 134 -EELPIGYG----CTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFAVVCFYT 188
+ YG C+F Q++ NG+NVL G+ LL+ P VK+ GW L +++ FA++ YT
Sbjct: 121 LSNTDLSYGEPNFCSFPQSVLNGINVLCGISLLTMPYAVKEGGWLGLCILLSFAIITCYT 180
Query: 189 AELMRHCFQSREGIISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLF 248
L++ C +S + +YPDIG+AAFG GR+ ISI+LY ELY CVE+IIM DNLS +F
Sbjct: 181 GILLKRCLESSSDLRTYPDIGQAAFGFTGRLIISILLYMELYVCCVEYIIMMSDNLSRVF 240
Query: 249 PGTSLHWGSLNLDGKHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALVGACVYAVG 308
P +L+ ++LD +FAI A LI+LPTVWLKDL +SYLSAGGV + L+ C++ VG
Sbjct: 241 PNITLNIVGVSLDSPQIFAISATLIVLPTVWLKDLSLLSYLSAGGVFVSILLALCLFWVG 300
Query: 309 TRKDVGFHHTAPLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAMLICFVLP 368
+ VGFH ++ + +P A GI+GF F+GH+V P+IY SM F +LI F
Sbjct: 301 SVDGVGFHTGGKSLDLANLPVAIGIFGFGFSGHAVLPSIYSSMKEPSKFPLVLLISFGFC 360
Query: 369 VFLYGSVGAAGFLMFGERTSSQITLDLPRDAFASKVSLWT 408
VF Y V G+ MFGE SQ TL++P+ ASK+++WT
Sbjct: 361 VFFYIVVAICGYSMFGEAIQSQFTLNMPQQYTASKIAVWT 400
>At5g15240 unknown protein
Length = 423
Score = 247 bits (631), Expect = 8e-66
Identities = 116/267 (43%), Positives = 173/267 (64%), Gaps = 1/267 (0%)
Query: 143 TFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFAVVCFYTAELMRHCFQSREGI 202
+F++T F+G+N L+GVG+LS P + GW SL+++ A+ FY A L++ C + +
Sbjct: 34 SFSKTCFHGINALSGVGILSVPYALASGGWLSLIILFTVAITTFYCAILIKRCMEMDPLL 93
Query: 203 ISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLFPGTSLHWGSLNLDG 262
SYPDIG AFG GRV +SI + ELY F+I+EGDNL+ LF L++ L G
Sbjct: 94 RSYPDIGYKAFGNTGRVIVSIFMNLELYLVATSFLILEGDNLNKLFSNVGLNFMGLEFQG 153
Query: 263 KHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALVGACVYAVGTRKDVGF-HHTAPL 321
K +F I+ ALIILP+VWL ++R +SY+SA GV + ++ A +++VG + VGF ++ + +
Sbjct: 154 KQMFIIMVALIILPSVWLDNMRILSYVSASGVFASGVILASIFSVGAFEGVGFKNNDSEV 213
Query: 322 VNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAMLICFVLPVFLYGSVGAAGFL 381
+GV + +Y FC+ H VFP +Y SM NK+ F+ M+ICF + F+Y SV G+L
Sbjct: 214 FRLNGVATSVSLYAFCYCAHPVFPTLYTSMKNKRQFSNVMIICFTICTFIYASVAVLGYL 273
Query: 382 MFGERTSSQITLDLPRDAFASKVSLWT 408
M+G SQITL+LP D +SKV++WT
Sbjct: 274 MYGSDVESQITLNLPTDKLSSKVAIWT 300
>At3g28960 hypothetical protein
Length = 361
Score = 201 bits (510), Expect = 9e-52
Identities = 94/231 (40%), Positives = 139/231 (59%), Gaps = 1/231 (0%)
Query: 143 TFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFAVVCFYTAELMRHCFQSREGI 202
+F +T FN LN L+G+G+LS P ++ + GW SL ++++ AV FYT+ L+ C + I
Sbjct: 17 SFFKTCFNALNALSGIGILSVPYSLARGGWLSLSLLLLLAVTAFYTSLLITKCMNADRNI 76
Query: 203 ISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLFPGTSLHWGSLNLDG 262
+YPDIGE AFG+ GR+ +S+ ++ ELY F+I+EGDNL LFPG ++ L L+G
Sbjct: 77 KTYPDIGERAFGRPGRIIVSVFMHLELYLVTTGFLILEGDNLHNLFPGFTIEMIGLRLNG 136
Query: 263 KHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALVGACVYAVGTRKDVGFHHTAPLV 322
K F A +I+PT+W +L +SY+S GV+ T + + +G +GFH L+
Sbjct: 137 KQAFMATVAFVIMPTLWWDNLSVLSYVSMSGVLATTVTLGSISWIGAFDGIGFHQKGKLI 196
Query: 323 NWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTK-AMLICFVLPVFLY 372
NWSG+P A +Y FC+ H V P +Y SM +K F A+ V PV Y
Sbjct: 197 NWSGIPTALSLYAFCYGAHPVLPTLYSSMKSKHQFNNVAIYTTLVNPVAKY 247
>At5g16740 putative protein
Length = 426
Score = 179 bits (455), Expect = 2e-45
Identities = 95/268 (35%), Positives = 153/268 (56%), Gaps = 9/268 (3%)
Query: 143 TFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFAVVCFYTAELMRHCFQSREGI 202
+F ++ N + +L G+G LS P V+ GW S+ +++ F ++ YT+ ++ C +
Sbjct: 34 SFLHSVINMVGMLIGLGQLSMPYAVESGGWMSIFLLISFGILTTYTSHILGKCIRRNPKS 93
Query: 203 ISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLFPGTSLHWGSLNLDG 262
SY DIG +AFG++GR+ + + +Y E++ V + I DN+S FP T + G +
Sbjct: 94 KSYSDIGYSAFGRHGRLIVCLFIYLEIFMALVSYTISLHDNISAAFPATFSNHG--HFPA 151
Query: 263 KHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALV-GACVYAV--GTRKDVGFHHTA 319
L A+ A I LP++W++DL +S+LS+GG++ +A++ G+ VY G D G
Sbjct: 152 AKLTAV-AVAIALPSLWIRDLSSISFLSSGGILMSAIIFGSVVYTAIFGGVIDDG---KI 207
Query: 320 PLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAMLICFVLPVFLYGSVGAAG 379
P++ +P GIY F F GH VFPN+Y SM + FTK ++ F LYG++ G
Sbjct: 208 PVLRLENIPTVSGIYLFSFGGHIVFPNLYTSMKDPSKFTKVSIVSFATVTALYGALAITG 267
Query: 380 FLMFGERTSSQITLDLPRDAFASKVSLW 407
MFG +SQITL LP+ +K++LW
Sbjct: 268 AKMFGPSVNSQITLSLPKHLVVTKIALW 295
>At3g11900 putative amino acid transporter protein
Length = 432
Score = 84.3 bits (207), Expect = 1e-16
Identities = 74/289 (25%), Positives = 120/289 (40%), Gaps = 20/289 (6%)
Query: 130 KNIPEELPIGYGCTFTQTIFNGLNVLAGVGLLSAPDTVKQAGW-ASLLVIVVFAVVCFYT 188
K+ P E G + QT+ N + + G G+L P + AGW A L +++ +Y
Sbjct: 19 KSPPSETTGGDRTSALQTLGNIIVSIVGTGVLGLPYAFRIAGWLAGSLGVIIVGFATYYC 78
Query: 189 AELMRHC---FQSREG---IISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGD 242
L+ C +S EG +Y D+G G GR +++T V +++ G
Sbjct: 79 MLLLIQCRDKLESEEGEEESKTYGDLGFKCMGTKGRYLTEFLIFTAQCGGSVAYLVFIGR 138
Query: 243 NLSGLFPGTSLHWGSLNLDGKHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALVGA 302
NLS +F L S F ++ I + W+ L +S S + +
Sbjct: 139 NLSSIFSSYGLSMVS--------FILILVPIEVGLSWITSLSALSPFSIFADICNIIAMC 190
Query: 303 CVYAVGTRK----DVGFH-HTAPLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDF 357
V D F TA G+PFA G+ FCF G ++ + SM ++ F
Sbjct: 191 FVVKENVEMVIEGDFSFSDRTAISSTIGGLPFAGGVAVFCFEGFAMTLALESSMREREAF 250
Query: 358 TKAMLICFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPRDAFASKVSL 406
K + F+Y G G++ +G++T ITL+LP + A V +
Sbjct: 251 PKLLAKVLAGITFVYVLFGFCGYMAYGDQTKDIITLNLPNNWSAIAVQI 299
>At1g61270 amino acid permease
Length = 418
Score = 69.7 bits (169), Expect = 3e-12
Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 28/287 (9%)
Query: 149 FNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFA-VVCFYTAELMRHCFQSREG--IISY 205
F+ + + G G+L P + + GW +V+++ + V+ YT M + EG Y
Sbjct: 33 FHNVTAIVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYTFWQMIEMHEMFEGKRFDRY 92
Query: 206 PDIGEAAFGKYGRVFISIVLYTEL-YSYCVEFIIMEGDNLSGLFPGTSLHWGSLNLDGKH 264
++G+AAFGK ++I + L + S C+ +++ G++L + + + L +H
Sbjct: 93 HELGQAAFGKKLGLYIVVPLQLLVETSACIVYMVTGGESLKKIHQLSVGDYECRKLKVRH 152
Query: 265 LFAILAALIILPTVWLKDLRFVSYLSAGGVVGT------ALVGACVYAVGTRKDVGFHHT 318
I A+ + ++ LK+ +S +S V + A V + V + G+
Sbjct: 153 FILIFASSQFVLSL-LKNFNSISGVSLVAAVMSMSYSTIAWVASLTKGVANNVEYGYKRR 211
Query: 319 APLVNWSGVPFAF----GIYGFCFAGHSVFPNIYQSM------ANKKDFTKAMLICFVLP 368
N + VP AF G F +AGH+V I ++ +K+ K ++ +++
Sbjct: 212 ----NNTSVPLAFLGALGEMAFAYAGHNVVLEIQATIPSTPENPSKRPMWKGAIVAYIIV 267
Query: 369 VFLYGSVGAAGFLMFGERTSSQI--TLDLPRDAFASKVSLWTITHML 413
F Y V GF FG I TL P+ +++ I H++
Sbjct: 268 AFCYFPVALVGFWTFGNNVEENILKTLRGPK-GLIIVANIFVIIHLM 313
>At5g65990 amino acid transporter protein-like
Length = 427
Score = 68.9 bits (167), Expect = 5e-12
Identities = 63/277 (22%), Positives = 117/277 (41%), Gaps = 26/277 (9%)
Query: 146 QTIFNGLNVLAGVGLLSAPDTVKQAGWA-SLLVIVVFAVVCFYTAELMRHCFQSREG--- 201
+T N + G G+L P T K+ GW LL ++ + + F+ L+ H + E
Sbjct: 42 KTFANVFIAIVGAGVLGLPYTFKKTGWLLGLLTLLFVSSLTFFCMMLLVHTRRKLESLSG 101
Query: 202 ---IISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLFPGTSLHWGSL 258
I S+ D+GE+ G GR+ + ++L +CV ++I ++ L L
Sbjct: 102 FNSITSFGDLGESVCGPAGRLVVDVMLVLSQSGFCVSYLIFVATTMANL----------L 151
Query: 259 NLDGKHLFAILAALIILPTVW-----LKDLRFVSYLSAGGVVGTAL-VGACVYAVGTRKD 312
+ +H+ + AA I L + L + +++L+ + + V A + +
Sbjct: 152 SRGTEHILGLDAASIYLWGCFPFQLGLNSIPSLTHLAPLSIFADIVDVAATLVVMVQDVF 211
Query: 313 VGFHHTAPLVNWSGVPFAF---GIYGFCFAGHSVFPNIYQSMANKKDFTKAMLICFVLPV 369
+ PL + GV F G+ + F G + + K F +A+ + L
Sbjct: 212 IFLKRRPPLRVFGGVSVFFYGLGVAVYAFEGIGMVLPLELEAKYKDKFGRALGLAMGLIS 271
Query: 370 FLYGSVGAAGFLMFGERTSSQITLDLPRDAFASKVSL 406
+YG+ G G++ +GE T IT +L ++ V L
Sbjct: 272 IMYGAFGLLGYMAYGEETKDIITTNLGTGVVSTLVQL 308
>At3g01760 putative amino acid permease
Length = 455
Score = 67.0 bits (162), Expect = 2e-11
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 21/284 (7%)
Query: 149 FNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFA-VVCFYTAELMRHCFQSREG--IISY 205
F+ + + G G+L P + + GW +V+++ + V+ YT M + EG Y
Sbjct: 41 FHNVTAIVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYTLWQMIEMHEMFEGQRFDRY 100
Query: 206 PDIGEAAFGKYGRVFISIVLYTEL-YSYCVEFIIMEGDNLSGLFPGTSLHWGS--LNLDG 262
++G+AAFGK ++I + L + S C+ +++ G +L + +L G L
Sbjct: 101 HELGQAAFGKKLGLYIIVPLQLLVEISVCIVYMVTGGKSLKNVH-DLALGDGDKCTKLRI 159
Query: 263 KHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALVGACVYAVGTRK--DVGFHHTAP 320
+H I A+ + ++ LK+ +S +S V + + RK G
Sbjct: 160 QHFILIFASSQFVLSL-LKNFNSISGVSLVAAVMSVSYSTIAWVASLRKGATTGSVEYGY 218
Query: 321 LVNWSGVPFAF----GIYGFCFAGHSVFPNIYQSM------ANKKDFTKAMLICFVLPVF 370
+ VP AF G F +AGH+V I ++ +K+ K ++ +++ F
Sbjct: 219 RKRTTSVPLAFLSALGEMAFAYAGHNVVLEIQATIPSTPENPSKRPMWKGAVVAYIIVAF 278
Query: 371 LYGSVGAAGFLMFGERTSSQITLDLPR-DAFASKVSLWTITHML 413
Y V GF FG I L + A +++ + H+L
Sbjct: 279 CYFPVALVGFKTFGNSVEESILESLTKPTALVIVANMFVVIHLL 322
>At5g40780 amino acid permease
Length = 446
Score = 60.1 bits (144), Expect = 3e-09
Identities = 67/315 (21%), Positives = 132/315 (41%), Gaps = 38/315 (12%)
Query: 126 ASIQKNIPEELPI--GYGCTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWA-SLLVIVVFA 182
A+ QK I + LPI + + F+ + + G G+L P + Q GW + V+V+
Sbjct: 18 AARQKEIEDWLPITSSRNAKWWYSAFHNVTAMVGAGVLGLPYAMSQLGWGPGIAVLVLSW 77
Query: 183 VVCFYTAELMRHCFQSREG--IISYPDIGEAAFGKYGRVFISI--VLYTELYSYCVEFII 238
V+ YT M + G Y ++G+ AFG+ ++I + L E+ C+ +++
Sbjct: 78 VITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLYIVVPQQLIVEI-GVCIVYMV 136
Query: 239 MEGDNLSGLFPGTSLHWGSLNLDGKHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTA 298
G +L + L D + ++I +V ++ S GV A
Sbjct: 137 TGGKSLK--------KFHELVCDDCKPIKLTYFIMIFASVHFVLSHLPNFNSISGVSLAA 188
Query: 299 LVGACVYAV---------GTRKDVGFHHTAPLVNWSGVPFAF----GIYGFCFAGHSVFP 345
V + Y+ G ++DV + + A +G F F G F +AGH+V
Sbjct: 189 AVMSLSYSTIAWASSASKGVQEDVQYGYKAKTT--AGTVFNFFSGLGDVAFAYAGHNVVL 246
Query: 346 NIYQSM------ANKKDFTKAMLICFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPRDA 399
I ++ +K + +++ +++ Y V G+ +FG I + L + A
Sbjct: 247 EIQATIPSTPEKPSKGPMWRGVIVAYIVVALCYFPVALVGYYIFGNGVEDNILMSLKKPA 306
Query: 400 F-ASKVSLWTITHML 413
+ + +++ + H++
Sbjct: 307 WLIATANIFVVIHVI 321
>At1g49370 hypothetical protein
Length = 190
Score = 60.1 bits (144), Expect = 3e-09
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 149 FNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFAVVCFYTAELMRHCFQSREGIISYPDI 208
FN LN L+GVG+L+ P + +GW S+L + V +YT L++ C + + SYPD+
Sbjct: 20 FNTLNSLSGVGILAIPYALSSSGWISILFFFLIGVTTWYTGLLLQRCLKLDPMVRSYPDL 79
Query: 209 GEAAFGK 215
AFGK
Sbjct: 80 ANKAFGK 86
Score = 59.7 bits (143), Expect = 3e-09
Identities = 26/53 (49%), Positives = 32/53 (60%)
Query: 307 VGTRKDVGFHHTAPLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTK 359
+G VGF + LV WSG+P A +Y C+ H VFP IY SM NKK F+K
Sbjct: 94 IGAIDGVGFKNKGVLVKWSGIPTAVSLYLVCYTAHHVFPTIYNSMKNKKHFSK 146
>At4g38250 putative amino acid transport protein
Length = 436
Score = 57.8 bits (138), Expect = 1e-08
Identities = 60/280 (21%), Positives = 115/280 (40%), Gaps = 19/280 (6%)
Query: 146 QTIFNGLNVLAGVGLLSAPDTVKQAGWA-SLLVIVVFAVVCFYTAELMRHCFQSREG--- 201
+T N + G G+L P K+ GW +L++V +V+ + L+ + + +
Sbjct: 38 KTFANVFIAVVGAGVLGLPYAFKRTGWLMGVLLLVSVSVLTHHCMMLLVYTRRKLDSFNA 97
Query: 202 ----IISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLFPG---TSLH 254
I S+ D+G A G GR+ + + + +CV ++I G L+ L TSL
Sbjct: 98 GISKIGSFGDLGFAVCGSLGRIVVDLFIILSQAGFCVGYLIFIGTTLANLSDPESPTSLR 157
Query: 255 WGSLNLDGKHLFAILAALIILPT----VWLKDLRFVSYLSAGGVVGTAL-VGACVYAVGT 309
L + L +L I + L ++ +++L+ + + +GA +
Sbjct: 158 HQFTRLGSEFLGVSSKSLYIWGCFPFQLGLNSIKTLTHLAPLSIFADIVDLGAMAVVIVE 217
Query: 310 RKDVGFHHTAPLVNWSGVP---FAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAMLICFV 366
+ +V + G+ + G+ + F G + + M +K F K + +
Sbjct: 218 DSMIILKQRPDVVAFGGMSLFLYGMGVAVYSFEGVGMVLPLESEMKDKDKFGKVLALGMG 277
Query: 367 LPVFLYGSVGAAGFLMFGERTSSQITLDLPRDAFASKVSL 406
+Y + G G+L FGE T IT +L ++ V L
Sbjct: 278 FISLIYIAFGILGYLAFGEDTMDIITANLGAGLVSTVVQL 317
>At1g67640 putative amino acid permease
Length = 441
Score = 52.0 bits (123), Expect = 7e-07
Identities = 63/317 (19%), Positives = 133/317 (41%), Gaps = 26/317 (8%)
Query: 118 QESTWWEKASIQKNIPEELPI--GYGCTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASL 175
Q S + ++ QKN+ + LPI + + F+ + + G G+LS P + GW
Sbjct: 5 QSSPTKDASTKQKNVDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPG 64
Query: 176 LVIVVFA-VVCFYTAELMRHCFQSREG--IISYPDIGEAAFGKYGRVFISIVLYTEL--- 229
+ I++ + ++ FYT M + G Y ++G+ AFG+ ++ + IV+ +L
Sbjct: 65 VTIMIMSWLITFYTLWQMVQMHEMVPGKRFDRYHELGQHAFGE--KLGLWIVVPQQLIVE 122
Query: 230 YSYCVEFIIMEGDNLSGLFPGTSLHWGSLNLDGKHLFAILAALIILPTVWLKDLRFVSYL 289
+ +++ G +L + L N+ + I A++ + L + +S +
Sbjct: 123 VGVDIVYMVTGGKSLKKIH--DLLCTDCKNIRTTYWIMIFASIHFV-LAHLPNFNSISIV 179
Query: 290 SAGGVVGTALVGACVYAVGTRKDV--GFHHTAPLVNWSGVPF----AFGIYGFCFAGHSV 343
S V + +A +K V +++ SG F A G F +AGH+V
Sbjct: 180 SLAAAVMSLSYSTIAWATSVKKGVHPNVDYSSRASTTSGNVFNFLNALGDVAFAYAGHNV 239
Query: 344 FPNIYQSM------ANKKDFTKAMLICFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPR 397
I ++ +K K +++ +++ Y V + +FG I + L +
Sbjct: 240 VLEIQATIPSTPEKPSKIAMWKGVVVAYIVVAICYFPVAFVCYYIFGNSVDDNILMTLEK 299
Query: 398 DAFASKV-SLWTITHML 413
+ + + + + H++
Sbjct: 300 PIWLIAIANAFVVVHVI 316
>At3g30390 unknown protein
Length = 460
Score = 49.3 bits (116), Expect = 4e-06
Identities = 56/275 (20%), Positives = 107/275 (38%), Gaps = 18/275 (6%)
Query: 141 GCTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWA-SLLVIVVFAVVCFYTAELMRHCFQSR 199
G +F+ +FN + G G+++ P T+K G + +IVV A + + E + F
Sbjct: 42 GASFSGAVFNLATTIIGAGIMALPATMKILGLGLGITMIVVMAFLTDASIEFLLR-FSKA 100
Query: 200 EGIISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLFPGTSLHWGSL- 258
SY + +FG GR+ + + + + ++I+ GD L+G H+G L
Sbjct: 101 GKNRSYGGLMGGSFGNPGRILLQVAVLVNNIGVLIVYMIIIGDVLAGKTEDGIHHFGVLE 160
Query: 259 NLDGKHLFAILAALIILPTVW----------LKDLRFVSYLSAGGVVGTALVGACVYAV- 307
G H + AA++++ T+ + L+F S LS V ++ A + +
Sbjct: 161 GWFGHHWWNGRAAILLITTLGVFAPLACFKRIDSLKFTSALSVALAVVFLIITAGISIMK 220
Query: 308 ----GTRKDVGFHHTAPLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAMLI 363
G L ++ + + F H +I + + +
Sbjct: 221 LISGGVAMPRLLPDVTDLTSFWNLFTVVPVLVTAFICHYNVHSIQNELEDPSQIRPVVRS 280
Query: 364 CFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPRD 398
+L +Y GFL+FG+ T + + D
Sbjct: 281 ALMLCSSVYIMTSIFGFLLFGDDTLDDVLANFDTD 315
>At5g38820 transporter -like protein
Length = 456
Score = 48.9 bits (115), Expect = 6e-06
Identities = 59/280 (21%), Positives = 109/280 (38%), Gaps = 28/280 (10%)
Query: 141 GCTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWA-SLLVIVVFAVVCFYTAELMRHCFQSR 199
G +F+ +FN + G G+++ P T+K G + +IV+ A + + E + F +
Sbjct: 34 GASFSGAVFNLATTIIGAGIMALPATMKILGLIPGITIIVLMAFLTDASIEFLLR-FSNI 92
Query: 200 EGIISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGL------FPGTSL 253
SY + + +FGK GR+ + + + + ++I+ GD L+G G
Sbjct: 93 GNQRSYGGVMDDSFGKCGRIMLQVSILVSNIGVLIVYMIIIGDVLAGKNEYGIHHAGMLE 152
Query: 254 HWGSLNLDGKHLFAILAA--LIILPTVWLK---DLRFVSYLSAGGVVGTALVGACVYAVG 308
W ++ + F +L + P K LRF S +S V ++ A + +
Sbjct: 153 GWFGISWWNRRTFVLLVTTLTVFAPLTCFKRIDSLRFTSAISVALAVVFLVITAGITIIK 212
Query: 309 TRKDVGFHHTAPLVN----------WSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFT 358
D G L N ++ VP Y + HS+ + K
Sbjct: 213 LFTD-GLMMPRLLPNVTDLSSFWKLFTVVPVLVNAYICHYNVHSIQNELEDPSRIKPVVR 271
Query: 359 KAMLICFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPRD 398
A+ +C +Y G+L+FG+ T + + D
Sbjct: 272 SALAMC----SSVYVMTSLFGYLLFGDGTLDDVLANFDTD 307
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.327 0.141 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,518,713
Number of Sequences: 26719
Number of extensions: 467808
Number of successful extensions: 4252
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 3319
Number of HSP's gapped (non-prelim): 486
length of query: 459
length of database: 11,318,596
effective HSP length: 103
effective length of query: 356
effective length of database: 8,566,539
effective search space: 3049687884
effective search space used: 3049687884
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Medicago: description of AC122169.1