BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122162.9 - phase: 0
(380 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17027 F - Box like protein 140 9e-34
At2g17036 F - Box like protein 120 9e-28
At5g24040 putative protein 93 2e-19
At1g65770 hypothetical protein 80 2e-15
At1g64840 hypothetical protein 70 1e-12
At5g60060 putative protein 69 6e-12
At2g26160 hypothetical protein 56 4e-08
At1g65760 hypothetical protein 56 4e-08
At2g17690 hypothetical protein 53 3e-07
At3g25750 hypothetical protein 52 7e-07
At1g65740 hypothetical protein 52 7e-07
At2g16290 hypothetical protein 51 1e-06
At2g16320 pseudogene; similar to MURA transposase of maize Muta... 50 3e-06
At1g44080 hypothetical protein 46 4e-05
At2g24255 hypothetical protein 44 1e-04
At1g69090 hypothetical protein 44 2e-04
At4g35740 putative protein 42 7e-04
At5g66830 putative protein 41 0.001
At2g24245 unknown protein 41 0.001
At4g22170 putative protein 39 0.004
>At2g17027 F - Box like protein
Length = 427
Score = 140 bits (354), Expect = 9e-34
Identities = 122/410 (29%), Positives = 188/410 (45%), Gaps = 59/410 (14%)
Query: 5 DWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRS-----SSIPNHHNILPFKFPLLKCE 59
DWS LPKDLL LIS+ +++ DLI+FRS+CS+WRS S +P HH P+L
Sbjct: 3 DWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHH------LPILPDN 56
Query: 60 DNSIKYNDNEISSSSNHHPSQLEEKQTLI--PRRP--------WLIRFTQ--NSHGKTKL 107
S+ + D+ + +L ++ L+ P P WLI+ + N K L
Sbjct: 57 GGSL-FPDSAVG-------FRLSQRSILLIKPHEPCIESDSFGWLIKVEEDLNVPRKVTL 108
Query: 108 FHPLIKYPRPQQEETLAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLA 167
PL E PRV D +K V LG +F L N +Y+ V
Sbjct: 109 LDPLCDTRNSIPEN---FPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKY 165
Query: 168 VTCHGKDPLILGSLGYCSYRPLLFRDRDEHWKPIPKMSSLYGDTCVFKGQLYAVHQSGQT 227
+ C G +L ++ + S + +FR D W I M S Y D +F G+ +AV +G+T
Sbjct: 166 LDCDGDYKFVLLTI-HVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRT 224
Query: 228 VTIGPDS-SVELAAQPLGHDSPGGNKMLVESEGRLLLLGIEES-----------SNYFSI 275
V + S + L A P+ G K L+ES G +LL+ + S F
Sbjct: 225 VVVDYSSLKLTLVASPV---FGGDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEH 281
Query: 276 DFFELDEKKKKWVRLMDFDEKEKKWVKLRNFGDRVFFIGRGCSFSASASDLCIQKGNCAI 335
F ++E+ K+ ++ F E+E+ WV + + D++ F+G +FSASASD+ ++
Sbjct: 282 PAFYMNERTVKF-KVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSV 340
Query: 336 FIDESVLHNNNM----VRGKRVFHLDQDRLSRGSK---YLNLFL-PPEWI 377
F + +V + ++ R VF ++ K Y LF PP WI
Sbjct: 341 FFNGNVFNGEDLGAMQDRDLGVFDFRSGKIELVQKLPEYAKLFWPPPPWI 390
>At2g17036 F - Box like protein
Length = 404
Score = 120 bits (302), Expect = 9e-28
Identities = 123/400 (30%), Positives = 191/400 (47%), Gaps = 45/400 (11%)
Query: 5 DWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSSSIPNH----HNILPFKFPLLKCED 60
DW+ LPKDLL LIS+ +++ DLI+FRS+CS+WRS++ P HN LPF FP
Sbjct: 3 DWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHN-LPF-FP-----S 55
Query: 61 NSIKYNDNEISSSSNHHPSQL----EEKQTLIPRRPWLIRFTQNSHGKTKLFHPLIKYPR 116
+ + N I + H S L E Q W+++ N + K+ L+K
Sbjct: 56 DDKPFLSNVILRVA--HQSILLIKPNEPQCEADLFGWIVKVWDNIYVSRKM--TLLKPLS 111
Query: 117 PQQEETLAH-PRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLAVTCHGKDP 175
+ H PR+FD +K +V L + L ++ H L V D
Sbjct: 112 SSRNYFPQHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVVKYLNDDK 171
Query: 176 LILGSLGYCSYRPL-LFRDRDEHWKPI-PKMSSLYGDTCVFKGQLYAVHQSGQTVTIGPD 233
+L L Y L +FR D W I + S D +F G+ +A+ +G+TV +
Sbjct: 172 FVL--LTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYS 229
Query: 234 S-SVELAAQPLGHDSPGGNKMLVESEGRLLLLGIEESSN---YFSIDFFELDEK-----K 284
S + LAA PL G K L+ES G + L+ IE N F+ F+ + K
Sbjct: 230 SFKLTLAANPL--IGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGGFYSYFNETTVSYK 287
Query: 285 KKWVRLMDFDEKEKKWVKLRNFGDRVFFIGRGCSFSASASDL---CIQKGNCAIFI--DE 339
K+ +L+ E+EK+WV++ + GD++FF+G +FSAS +D+ C+ G+ F +E
Sbjct: 288 FKFFKLV---EREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFYTHEE 344
Query: 340 SVLHNNNMVRGKRVFHLDQDRL-SRGSKYLNLFL-PPEWI 377
S++ ++ G F + L ++ +Y LF PP WI
Sbjct: 345 SLVVMDDRNLGVFDFRSGKTELVNKLPEYAKLFWPPPPWI 384
>At5g24040 putative protein
Length = 373
Score = 93.2 bits (230), Expect = 2e-19
Identities = 93/386 (24%), Positives = 166/386 (42%), Gaps = 32/386 (8%)
Query: 6 WSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSSSIPNHHNILPFKFPLLKCEDNSIKY 65
WS+LP ++L LIS +ID DLI FRS+CS WRSSS+ ++ + PL D
Sbjct: 4 WSELPPEILHLISLKIDNPFDLIHFRSVCSFWRSSSLLKFRHMTSLRCPLPL--DPGGCG 61
Query: 66 NDNEISSSSNHHPSQLEEKQTLIPRRPWLIRFTQNSHGKTKLFHPLIKYPR-------PQ 118
+D I SS + L + + W+ + +G+ L ++ P
Sbjct: 62 DDCHILSSRVY----LLKCPNRDRPQYWMFKLQAKENGEVVLHSLFLRRNSSAYGCLYPS 117
Query: 119 QEETLAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLAVTCHGKDPLIL 178
L + ++F+ + V F L + R G L + + +IL
Sbjct: 118 LSIDLLNCQIFELAQEHVACYSEWFELFECISKCEERIGFMGLNR-------EKNEYMIL 170
Query: 179 GSLGYCSYRPLLFRDRDEHWKPIP-KMSSLYGDTCVFKGQLYAVHQSGQTVTIGPDSSVE 237
G L + ++R D W + S + FKG+ YA+ ++G+T + P V
Sbjct: 171 GKLSFNGLA--MYRSVDNRWTELEITPDSFFEGIVPFKGKFYAIDRTGKTTVVDPTLEVN 228
Query: 238 LAAQPLGHDSPGGNKMLVESEGRLLLLGIEESSNYFSIDFFELDEKKKK-WVRLMDFDEK 296
+ D +L+ + +L+L+ + S Y DF + ++KK W + + +E+
Sbjct: 229 TFQRSRPCDKTRKRWLLMTGD-KLILVEMCTKSRY---DFHIPNIREKKIWFEISELNEE 284
Query: 297 EKKWVKLRNFGDRVFFIGRGCSFSASASDLCIQKGNCAIFIDESVLHNNNMVRGKRVFHL 356
W ++ + RV F+ C+FS A+++ + N IF+D N+ + V+
Sbjct: 285 RNDWDQVEDMDGRVLFLEHYCTFSCLATEIPGFRANSIIFMDLWGGSNSYELESILVYEF 344
Query: 357 DQD---RLSRGSKYLNLF-LPPEWIL 378
++ L +Y+ LF PP W++
Sbjct: 345 NEKGVRSLRDKLEYIELFPFPPGWVI 370
>At1g65770 hypothetical protein
Length = 360
Score = 80.1 bits (196), Expect = 2e-15
Identities = 94/362 (25%), Positives = 155/362 (41%), Gaps = 38/362 (10%)
Query: 4 ADWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSSSIPNHHNILPFKF-PLLKCEDNS 62
ADWS LP DLL +I+ R+ + I+L RFRSIC +WR SS+P PF+ PL+ N
Sbjct: 2 ADWSTLPVDLLNMIAGRLFSNIELKRFRSICRSWR-SSVPGAGKKNPFRTRPLILLNPNP 60
Query: 63 IK-YNDNEISSSSNHHPSQLEEKQTLIPRRPWLIRFTQN-SHGKTKLFHPLIKYPRPQQE 120
K D+ + + P + WLI+ + S GK L PL + P
Sbjct: 61 NKPLTDHRRRGEFLSRSAFFRVTLSSSPSQGWLIKSDVDVSSGKLHLLDPLSRLPMEHSR 120
Query: 121 ETLAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLAVTCHGKDPLILG- 179
+ + D ++ ++ + + + R R + K V V D +LG
Sbjct: 121 KRV------DLSEFTITEIREAYQV----HDWRTRKETRPIFKRVALVKDKEGDNQVLGI 170
Query: 180 -SLGYCSYRPL-LFRDRDEHWKPIPKMSSLYGDTCVFKGQLYAVHQSGQTVTIGPDSSVE 237
S G Y + ++ ++E ++ + D V KGQ YA+ G I D
Sbjct: 171 RSTGKMMYWDIKTWKAKEEGYE--------FSDIIVHKGQTYALDSIGIVYWIRSDLKF- 221
Query: 238 LAAQPLGHDSPGGNKMLVESEGRLLLLG--IEESSNYFSIDFFELDEKKKKWVRLMDFDE 295
+ PL D G++ LVE G ++ + ES+ D + K ++ FD+
Sbjct: 222 IRFGPLVGDWT-GDRRLVECCGEFYIVERLVGESTWKRKADDTGYEYAKTVGFKVYKFDD 280
Query: 296 KEKKWVKLRNFGDRVFFIGRGCSFSASASDLCIQKGNCAIFIDESVLHNNNMVRGKRVFH 355
++ K +++++ GD+ F I FS A + N F D++++ +VF
Sbjct: 281 EQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFTDDTMI---------KVFK 331
Query: 356 LD 357
LD
Sbjct: 332 LD 333
>At1g64840 hypothetical protein
Length = 384
Score = 70.5 bits (171), Expect = 1e-12
Identities = 91/349 (26%), Positives = 153/349 (43%), Gaps = 38/349 (10%)
Query: 5 DWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRS-----SSIPNHHNILP--FKFPLLK 57
+WSQLP++LL LIS+ +D D++ RSIC +WRS SS+ LP KFPL+
Sbjct: 4 NWSQLPEELLNLISKNLDNCFDVVHARSICRSWRSAFPFPSSLSTLSYSLPTFAKFPLVS 63
Query: 58 CEDNSIKYNDNEISSSSNHHPSQLEEKQTLIPRRPWLIRFTQNSHGKTKLFHPL---IKY 114
+ ++K + + N E I + S+ +L PL +K
Sbjct: 64 KDLCTLKKIQIFLFRARNPAADIPEYFLGGIDQ--------DQSNDHMELPSPLQCSVKV 115
Query: 115 PRPQQEETLAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLAVTCHGKD 174
PQ + L + + D+ ++ LG +I+ + + + Y + L V +G D
Sbjct: 116 KFPQSDPFLVN--MLDY---QIIPLGFQYIM--IGWDPESLANGY-VGVAFLPVKKNGGD 167
Query: 175 PLILGSLGYCSYRPLLFRDRDEHWKPIPKMSSLYGDTCV-FKGQLYAVHQSGQTVTIGPD 233
++ L Y ++ L+ R + W + K S V F+G+ Y +G P
Sbjct: 168 EFVV-LLRYRNHL-LVLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDPY 225
Query: 234 SSVELAAQPLGHDSPGGNKMLVESEGRLLLLGIEESSNYFSIDFFELDEKKKKWVRLMDF 293
S + P + +K L+ + L L +E+ + + D +L + RL
Sbjct: 226 SLEQTLLMP--SEPLRSSKYLIPNGSDELFL-VEKFNPFPEADVLDLSRFACRVSRL--- 279
Query: 294 DEKEKKWVKLRNFGDRVFFIGRGCSFSASASDL---CIQKGNCAIFIDE 339
DE+ +WV++ + GDRV FIG + SA +L C GN +F +E
Sbjct: 280 DEEAGQWVEVIDLGDRVLFIGHFGNVCCSAKELPDGCGVSGNSILFTNE 328
>At5g60060 putative protein
Length = 374
Score = 68.6 bits (166), Expect = 6e-12
Identities = 90/346 (26%), Positives = 140/346 (40%), Gaps = 49/346 (14%)
Query: 4 ADWSQLPKDLLTLISQRIDTE----IDLIRFRSICSNWRSSSIPNHHNILPFKFPLLKCE 59
+ WS LP D+L LIS R+D + I L+ RS+C+ WR S ++ N KFP
Sbjct: 9 SQWSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLSKFP----- 63
Query: 60 DNSIKYNDNEISSSSNH-----HPSQLEEKQTLIPRRPWLIRFTQNSHGKTKLFHPLIKY 114
KY SSSS+ S + + + + R L++ + + G ++ L
Sbjct: 64 ----KYLPFWSSSSSSSGFFTLKQSNVYKLEAPLNPRTCLVKLQETTPGIMRVLD-LFSN 118
Query: 115 PR----PQQEETLAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLAVTC 170
R P+ P D + V + + ++ N + L + +
Sbjct: 119 DRICFLPEN-----FPSKIDLQEFHVRLVRRTYRMEYANNGGGAVPCFWSLHSDKVVILS 173
Query: 171 HGKDPLIL-----GSLGYCSYRPLLFRDRDEHWKPIPKM-SSLYGDTCVFK-GQLYAVHQ 223
G+D I+ G LG+ L DE WK + + +Y D ++K + V
Sbjct: 174 SGEDSAIIAIHSGGKLGF------LKSGNDEKWKILDNSWNVIYEDIMLYKDNRCIVVDD 227
Query: 224 SGQTVTIGPDSSVELAAQPLGHDSPGGNKMLVESEGRLLLLGIEESSNYFSIDFFELD-E 282
G+TV D V A+ L G K LVE G + L Y + + D
Sbjct: 228 KGKTVIYDVDFKVSDLAEGLVGGG-GHKKHLVECSGGEVFL----VDKYVKTVWCKSDIS 282
Query: 283 KKKKWVRLMDFDEKEKKWVKLRNFGDRVFFIGRGCSFSAS--ASDL 326
K R+ + +EK+W ++R+ GD FIG CSFS A DL
Sbjct: 283 KSVVEFRVYNLKREEKRWEEVRDLGDVALFIGDDCSFSVQNPAGDL 328
>At2g26160 hypothetical protein
Length = 359
Score = 55.8 bits (133), Expect = 4e-08
Identities = 76/310 (24%), Positives = 124/310 (39%), Gaps = 49/310 (15%)
Query: 1 MAEADWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSSSIPNHHNILPFKFPLLKCE- 59
M + +WS+LP DL+ L + R + D++R RSIC WRS++ P F +C
Sbjct: 1 MEKPEWSELPGDLINLTANRFSSISDVLRVRSICKPWRSAA------ATPKSF---QCNL 51
Query: 60 DNSIKYNDNEISSSSNHH---PSQLEEKQTLIPRRPWLIRFTQNSH-GKTKLFHPLIKYP 115
+S K + +S ++ PS K WLIR Q S K L P +
Sbjct: 52 PSSNKMIETVLSPTTFFRVTGPSSCSYK-------GWLIRTKQVSESSKINLLSPFFRQL 104
Query: 116 RPQQEET--LAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRH---GIYMLPKTVLAVTC 170
++T L V + + +H+ +++ V H + L + AV
Sbjct: 105 LTPSQQTLDLLKFEVSEIRQSYEIHIFDKYLIQGVIGKEGPSHILSRVVFLDNLIFAV-- 162
Query: 171 HGKDPLILGSLGYCSYRPLLFRDRDEHWKPIPKMSSLYGDTCVFKGQLYAVHQSGQT--V 228
G+D I +C + W I + D + KGQ+YA+ +G +
Sbjct: 163 -GQDDKI-----WCCKSG---EESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGAIWWI 213
Query: 229 TIGPDSSVELAAQ-PLGHDS-PGGNKMLVESEGRLLLLG--------IEESSNYFSIDFF 278
++ P S ++ P+ +D NK LVE G L ++ I S +
Sbjct: 214 SLSPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCIIHQLRLKKAYIRRSQRTVGFKVY 273
Query: 279 ELDEKKKKWV 288
++DE KWV
Sbjct: 274 KMDEYVAKWV 283
>At1g65760 hypothetical protein
Length = 362
Score = 55.8 bits (133), Expect = 4e-08
Identities = 76/336 (22%), Positives = 138/336 (40%), Gaps = 33/336 (9%)
Query: 1 MAEADWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSS-SIPNHHNILPFKFPLLKCE 59
M + DWS LP++LL +I + + ++L RFRSIC +WRSS S N +N P + P + +
Sbjct: 1 MVDCDWSNLPEELLHMIVLLLFSVVELKRFRSICRSWRSSTSGVNRNNPFPSR-PRIHFD 59
Query: 60 ----DNSIKYNDNEISSSSNHHPSQLEEKQTL--IPRRPWLIRFTQN-SHGKTKLFHPLI 112
++ +D+ IS + TL + W+I+ + + G+ +L + L
Sbjct: 60 PIDPSETLSSDDSYISRPGAFLSRAAFFRVTLSSSSSKGWMIKSDMDINSGRFRLLNVLS 119
Query: 113 KYPRPQQEETLAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLAVTCHG 172
+YP E++ + +F + T +L+ S + P V H
Sbjct: 120 RYPLRLYSESI---DLLEFTVSEIREAYT--VLNTAKRRSATKGYQRSAPVKVKEGEGHR 174
Query: 173 KDPLILGSLGYCSYRPLLFRDRDEHWKPIPKMSSLYGDTCVFKGQLYAVHQSGQTVTIGP 232
L +G G +Y + +M + D V KG + + + + T
Sbjct: 175 DGVLGIGRDGNINYWD------GNVLSELKQMGDHFSDIIVHKGLINSDLEISRFGT-SL 227
Query: 233 DSSVELAAQPLGHDSPGGNKMLVESEGRLLLLG--IEESSNYFSIDFFELDEKKKKWVRL 290
D ++ D G+ VE G L ++ + + + DFF + +
Sbjct: 228 DENIT--------DGCWGDLRFVEGCGELYIVERLPKNTRKRKAGDFFH--NSRTVGFKA 277
Query: 291 MDFDEKEKKWVKLRNFGDRVFFIGRGCSFSASASDL 326
DE+ KW++++ GD F +G FS A ++
Sbjct: 278 YKMDEELAKWIEIKTLGDNAFLMGTDTCFSVLAHEV 313
>At2g17690 hypothetical protein
Length = 421
Score = 52.8 bits (125), Expect = 3e-07
Identities = 23/37 (62%), Positives = 32/37 (86%)
Query: 5 DWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSSS 41
DWS+LP++LL LI+ R+ + I+LIRFRSIC +WRSS+
Sbjct: 3 DWSKLPEELLGLIALRLYSVIELIRFRSICKSWRSSA 39
Score = 34.3 bits (77), Expect = 0.12
Identities = 22/90 (24%), Positives = 38/90 (41%)
Query: 250 GNKMLVESEGRLLLLGIEESSNYFSIDFFELDEKKKKWVRLMDFDEKEKKWVKLRNFGDR 309
GN ++ + + ++ S FE D K ++ DE+ KWV++++ GD+
Sbjct: 298 GNDDFFAAQAHRFIHVLHDNLGNVSCKPFERDPPKTIGFKVYKNDEELLKWVEVKSLGDK 357
Query: 310 VFFIGRGCSFSASASDLCIQKGNCAIFIDE 339
I FS SA + N F D+
Sbjct: 358 AIVIATDACFSVSAHEFYGCLPNSIYFTDK 387
>At3g25750 hypothetical protein
Length = 348
Score = 51.6 bits (122), Expect = 7e-07
Identities = 37/114 (32%), Positives = 56/114 (48%), Gaps = 11/114 (9%)
Query: 1 MAEADWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSSSIPNHHNILPFKFP-LLKCE 59
M + +WS LP++LL LI+ R + ID++R RS C +WR S++ L F+F L
Sbjct: 1 MEKTEWSDLPEELLDLIANRYSSNIDVLRIRSTCKSWR-SAVAMSKERLQFRFERYLPTS 59
Query: 60 DNSIKYNDNEISSSSNHHPSQLEEKQTLIPRRPWLIRFTQNS--HGKTKLFHPL 111
+ IK + + + PS P + WL+R Q S + K L PL
Sbjct: 60 NKKIKAHLSPTTFFRITLPSS-------CPNKGWLVRTRQASKMYRKITLLCPL 106
>At1g65740 hypothetical protein
Length = 371
Score = 51.6 bits (122), Expect = 7e-07
Identities = 78/362 (21%), Positives = 131/362 (35%), Gaps = 55/362 (15%)
Query: 5 DWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSS-----SIPNHHNIL----PFKFPL 55
DWS LP++LL I+ R + ++ RF SIC +W SS P H L P
Sbjct: 3 DWSTLPEELLHFIAARSFSLVEYKRFSSICVSWHSSVSGVKKNPFHRRPLIDFNPIAPSE 62
Query: 56 LKCEDNSIKYNDNEISSSSNHHPSQLEEKQTLIPRRPWLIRFTQNSH-GKTKLFHPLIKY 114
ED+ N S + L P + W+I+ +++ G+ L +PL ++
Sbjct: 63 TLLEDHVFSCNPGAFLSRAAFFRVTLSSS----PSKGWIIKSDMDTNSGRFHLLNPLSRF 118
Query: 115 PRPQQEETLAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTV---LAVTCH 171
P E+ LD ++FT Y + K L +
Sbjct: 119 PLRISSES----------------------LDLLDFTVSEIQESYAVLKDAKGRLPNPGY 156
Query: 172 GKDPLILGSLGYCSYRPLLFRDRD---EHW-----KPIPKMSSLYGDTCVFKGQLYAVHQ 223
+ L+ G + +L RD +W +M + D V KG Y +
Sbjct: 157 QRSALVKVKEGDDHHHGILGIGRDGTINYWNGNVLNGFKQMGHHFSDIIVHKGVTYVLDS 216
Query: 224 SGQTVTIGPDSSVELAAQPLGHDSPGGNK----MLVESEGRLLLLG--IEESSNYFSIDF 277
G I D + L + G + V+ G L ++ +E+S
Sbjct: 217 KGIVWCINSDLEMSRYETSLDENMTNGCRRYYMRFVDCCGELYVIKRLPKENSRKRKSTL 276
Query: 278 FELDEKKKKWVRLMDFDEKEKKWVKLRNFGDRVFFIGRGCSFSASASDLCIQKGNCAIFI 337
F+ + ++ D++ KWV+++ GD F + FS A + N FI
Sbjct: 277 FQF--SRTAGFKVYKIDKELAKWVEVKTLGDNAFVMATDTCFSVLAHEYYGCLPNSIYFI 334
Query: 338 DE 339
++
Sbjct: 335 ED 336
>At2g16290 hypothetical protein
Length = 415
Score = 50.8 bits (120), Expect = 1e-06
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 189 LLFRDRDEHWKPIPKMSSLYG--DTCVFKGQLYAVHQSGQTVTIGPDSSVELAAQPLGHD 246
+++R R+ W + + Y D FKG+ YA+ SG+ + S+ + P
Sbjct: 207 VMYRSRNMSWTQVVEHPETYAYQDLVAFKGKFYALDSSGRGRVFVVELSLRVTEIPSVKG 266
Query: 247 SPGGNKMLVESEGRLLLLG---IEESSNYFSIDFFELDEKKKKWVRLMDFDEK--EKKWV 301
S +K + G LLL I Y DE W ++ DE+ ++KWV
Sbjct: 267 SQYCSKESLVQLGEELLLVQRFIPAGRRY--------DEYIYTWFKVFRLDEEGGKRKWV 318
Query: 302 KLRNFGDRVFFIGRGCSFSASASDLCIQKGNCAIFI---DESVLHNNNMV 348
++ DRV F+G S L NC +F+ D S+ N++++
Sbjct: 319 QVNYLNDRVIFLGARTKLCCSVHKLPGANENCIVFLASNDGSIFDNDSVL 368
Score = 49.7 bits (117), Expect = 3e-06
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 4 ADWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSSSIPNHHN 47
ADWS LP DLL LI ++T +++ FRS+C +WRS P H+
Sbjct: 2 ADWSLLPNDLLELIVGHLETSFEIVLFRSVCRSWRSVVPPLDHS 45
>At2g16320 pseudogene; similar to MURA transposase of maize
Mutator transposon
Length = 467
Score = 49.7 bits (117), Expect = 3e-06
Identities = 20/36 (55%), Positives = 27/36 (74%)
Query: 4 ADWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRS 39
ADWS LP DLL LI ++T +++ FRS+CS+WRS
Sbjct: 2 ADWSLLPNDLLELIVGHLETSFEIVLFRSVCSSWRS 37
Score = 40.0 bits (92), Expect = 0.002
Identities = 19/48 (39%), Positives = 28/48 (57%), Gaps = 1/48 (2%)
Query: 6 WSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSSSIPNHHNILPFKF 53
WS L DLL LI +T +++ RS+CS+WR S +P N F++
Sbjct: 402 WSLLLNDLLKLIVGHFETSFEIVNLRSVCSSWR-SVVPPLDNFPLFRY 448
Score = 39.7 bits (91), Expect = 0.003
Identities = 36/154 (23%), Positives = 60/154 (38%), Gaps = 21/154 (13%)
Query: 189 LLFRDRDEHWKPIPKMSSLYG--DTCVFKGQLYAVHQSGQTVTIGPDSSVELAAQPLGHD 246
+++R R+ W + + Y D FKG+ YA+ SG+ + S+E+ P
Sbjct: 203 VMYRSRNMSWTQVVEHPEKYAYQDLVAFKGKFYALDSSGRGRVFVVELSLEVMEIPSVRG 262
Query: 247 SPGGNKMLVESEGRLLLLGIEESSNYFSIDFFELDEKKKKWVRLMDFDEKEKKWVKLRNF 306
S +K + G LLL F+ + DE W R+ DE+E + +
Sbjct: 263 SQQSSKENLVLSGEELLL-----VQRFTPEVRHYDEYLYTWFRVFRLDEEEGRETQ---- 313
Query: 307 GDRVFFIGRGCSFSASASDLCIQKGNCAIFIDES 340
+ S L K NC +FI+ +
Sbjct: 314 ----------TNLCCSVHKLPCAKENCIVFIESN 337
>At1g44080 hypothetical protein
Length = 311
Score = 45.8 bits (107), Expect = 4e-05
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 1 MAEADWSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSS 40
M + WS L +DL+ L++ + + I+L+RFRSIC WRS+
Sbjct: 1 MGKVGWSDLHEDLIDLLANNLSSNINLLRFRSICKPWRST 40
>At2g24255 hypothetical protein
Length = 336
Score = 43.9 bits (102), Expect = 1e-04
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Query: 189 LLFRDRDEHWKPIPKMS-SLYGDTCVFKGQLYAVHQSGQTVTIGPDSSVELAAQPLGHDS 247
L+ + WK + + ++ D F+G+ YA+ SGQ V I P S+E+
Sbjct: 155 LVLTSAEMRWKQLENVPYTICVDIVTFRGRFYALFLSGQIVVIDP-YSLEVTLLLSSPQD 213
Query: 248 PGGNKMLVESEGRLLLLGIEESSNYFSIDFFELDEKKKKWVRLMDFDEKEKKWVKLRNFG 307
P + LV L L N IDF L + ++ DEK KWV++ + G
Sbjct: 214 PRELRSLVPYGKDELFLVEVIIPNDVVIDFSRLARRVRR------VDEKAGKWVEVGDLG 267
Query: 308 DRVFFIG----------RGCSFSASASDLCIQKGNCAIFIDESVL 342
D V +G RG + +A Q GN ++ +S +
Sbjct: 268 DCVLLLGNLSCSAKEFPRGFGLTENAVLFGDQSGNAFLYYKQSAV 312
>At1g69090 hypothetical protein
Length = 401
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/222 (22%), Positives = 89/222 (39%), Gaps = 33/222 (14%)
Query: 6 WSQLPKDLLTLISQRIDTEIDLIRFRSICSNWR---SSSIPNHHNILPFKFPLLKCEDNS 62
WS+LP DL+ L+ +R+ +D R +S+CS+W+ S PN+ FP K
Sbjct: 29 WSKLPLDLMQLVFERL-AFLDFERAKSVCSSWQFGSKQSKPNNQIPWMILFPTDKNYCLL 87
Query: 63 IKYNDNEISSSSNHHPSQLEEKQTLIPRRPWLIRFTQNSHGKTKLFHPLIKYPRPQQEET 122
D E + H + L R WL+ +P+ EE
Sbjct: 88 FNPEDKEKLYKTQHLGDDFAKSIVLATYRSWLLM-------------------QPRYEEL 128
Query: 123 LAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLAVTCHGKDPLILGSLG 182
+F+ L++ +++N + I+ L +L + KD L++G++
Sbjct: 129 EDQTLDQEFH----LYIKDLLTCERINLPA-FESDIFGLSHPILWIDDKTKDYLVIGTIN 183
Query: 183 YCSYRPLLFRDRDEHWKPIPKM-SSLYGDTCVFKGQLYAVHQ 223
+ F++ D WK P++ S D C+ +Y H+
Sbjct: 184 --RETMVSFKNGDNSWKKFPELPKSSCTDMCL--NMIYKDHK 221
>At4g35740 putative protein
Length = 926
Score = 41.6 bits (96), Expect = 7e-04
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 1 MAEAD-WSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSSSIPNHHNILPFKFPLLKCE 59
M+EA WS LP +LL I+ + ++++L+RFRSIC +R S++ + N L
Sbjct: 1 MSEATVWSDLPGELLDHIANGLFSKVELLRFRSICKTFR-SAVDSDKNFL---------- 49
Query: 60 DNSIKYNDNEISSSSNHHPSQLEEKQTLIPRRPWLIRFTQNSH--GKTKLFHPLIKYPRP 117
+ +K N + S + + + P + WLI+ Q+++ + +L PL ++
Sbjct: 50 -DHLKRNRRRLLSP--YSTAFYRVVLSSYPDKGWLIKL-QDAYVSSQKQLLSPLSRFSIK 105
Query: 118 QQEETLAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLAVTCHGKDPLI 177
+TL D + +V + + ++ + + S + + VLA + +
Sbjct: 106 SSGKTL------DLLEFTVSEIHQSYDVEYLYYNS--TRASFNFARVVLA------EDFV 151
Query: 178 LGSLGYCSYRPLLFRDRDEHW-KPIPKMSSLYGDTCVFKGQLYAVHQSG 225
Y + D HW + + + L+ D KG +YA+ +G
Sbjct: 152 FIVDNYKKIWLCNSNESDSHWVRIMDEEVKLFSDIVFHKGYMYALDLTG 200
>At5g66830 putative protein
Length = 394
Score = 41.2 bits (95), Expect = 0.001
Identities = 53/207 (25%), Positives = 83/207 (39%), Gaps = 35/207 (16%)
Query: 6 WSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRS---SSIPNHHNILPFKFPLLKCEDNS 62
WS+LP DL+ + R+ D R +S+CS+W S +S PN N +P+ K ++
Sbjct: 20 WSKLPSDLMQFVFDRLGF-ADFQRAKSVCSSWLSVSRNSQPN--NQIPWMIRFPKDNNHC 76
Query: 63 IKYNDNEISSSSNHHPSQLEEKQTLIPR--RPWLIRFTQNSHGKTKLFHPLIKYPRPQQE 120
+ +N E E+K P + S+G L P +Y E
Sbjct: 77 LLFNPEE------------EDKMYKTPNLGNDFAKSSCIASYGSWLLMQPESEY----ME 120
Query: 121 ETLAHPRVFDFNKLSVLHLGTDFILDKVNFTSRNRHGIYMLPKTVLAVTCHGKDPLILGS 180
E L H N L +L L T +++N + L +L KD L++G
Sbjct: 121 EDLDH----QCNNLYILDLLT---RERINLPILQPE--FGLTCPILWTDEKSKDHLVIGM 171
Query: 181 LGYCSYRPLLFRDRDEHWKPIPKMSSL 207
+ F+ D WK IP +S +
Sbjct: 172 AH--EELAISFKKGDSSWKQIPTLSGI 196
>At2g24245 unknown protein
Length = 374
Score = 41.2 bits (95), Expect = 0.001
Identities = 18/37 (48%), Positives = 26/37 (69%), Gaps = 1/37 (2%)
Query: 5 DWSQLPKDLLTLISQRI-DTEIDLIRFRSICSNWRSS 40
DWSQLP++LL +IS + D D + RS+C +WRS+
Sbjct: 15 DWSQLPEELLHIISTHLEDHYFDAVHARSVCRSWRST 51
Score = 39.7 bits (91), Expect = 0.003
Identities = 44/158 (27%), Positives = 65/158 (40%), Gaps = 26/158 (16%)
Query: 184 CSYRPLLFRDRDEHWKPIPKMSSLY-GDTCVFKGQLYAVHQSGQTVTIGPDSSVELAAQP 242
C+ L+ R + W + K S+ + F+G+ YA +G T I P S L A P
Sbjct: 185 CTDLFLVLRSTEMRWIRLEKPSTASCKELFTFRGRFYATFFNGDTFVIDPSS---LEATP 241
Query: 243 LGHDSPGGNKMLVESEGRLLLLGIEESSNYFSIDFFELDEKKKKWVRLMDFDEKEKKWVK 302
L + LV S L L DF R+ DE+ +WV+
Sbjct: 242 LTPHID--SNFLVPSGNEELFL--------VKTDFLRC--------RVSRLDEEAAEWVE 283
Query: 303 LRNFGDRVFFIGRGC-SFSASASDL---CIQKGNCAIF 336
+ + GDRV F+G +F SA +L C G+ +F
Sbjct: 284 VSDLGDRVLFLGGHLGNFYCSAKELPHGCGLTGDSILF 321
>At4g22170 putative protein
Length = 428
Score = 39.3 bits (90), Expect = 0.004
Identities = 25/66 (37%), Positives = 37/66 (55%), Gaps = 8/66 (12%)
Query: 6 WSQLPKDLLTLISQRIDTEIDLIRFRSICSNWRSS---SIPNHHNILPFKFPLLKCEDNS 62
WS LP DLL L+ +R+ + + R RS+CS+W S+ S+P + FP EDN+
Sbjct: 10 WSDLPHDLLNLVFERL-SFANFNRARSVCSSWYSASRQSVPKNQIHWLILFP----EDNN 64
Query: 63 IKYNDN 68
K N +
Sbjct: 65 NKNNSS 70
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,631,453
Number of Sequences: 26719
Number of extensions: 446712
Number of successful extensions: 1130
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1067
Number of HSP's gapped (non-prelim): 70
length of query: 380
length of database: 11,318,596
effective HSP length: 101
effective length of query: 279
effective length of database: 8,619,977
effective search space: 2404973583
effective search space used: 2404973583
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC122162.9