BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122162.7 - phase: 0
(377 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17027 F - Box like protein 176 2e-44
At2g17036 F - Box like protein 143 1e-34
At5g24040 putative protein 112 3e-25
At5g60060 putative protein 90 2e-18
At1g64840 hypothetical protein 75 6e-14
At2g24245 unknown protein 70 2e-12
At2g16290 hypothetical protein 65 6e-11
At2g17690 hypothetical protein 59 6e-09
At1g65770 hypothetical protein 56 3e-08
At1g65760 hypothetical protein 56 4e-08
At3g25750 hypothetical protein 54 1e-07
At2g24255 hypothetical protein 53 3e-07
At1g65740 hypothetical protein 53 3e-07
At2g16320 pseudogene; similar to MURA transposase of maize Muta... 49 6e-06
At1g44080 hypothetical protein 45 7e-05
At4g25920 unknown protein 44 1e-04
At4g14260 hypothetical protein 42 6e-04
At2g26160 hypothetical protein 41 0.001
At5g46140 putative protein 41 0.001
At4g35740 putative protein 40 0.003
>At2g17027 F - Box like protein
Length = 427
Score = 176 bits (446), Expect = 2e-44
Identities = 139/409 (33%), Positives = 202/409 (48%), Gaps = 56/409 (13%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M DWS LP +LL LIS+ L++ L++FRSVCS+WRS++ P SPL P
Sbjct: 1 MVDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEP------KSPLPTHHLP--- 51
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNP----WLIRIGPDFK--GKTQLW 114
P N ++ + RL +I LIKP H+P + WLI++ D K L
Sbjct: 52 ILPDNGGSLFPDSAVGFRLSQRSILLIKP--HEPCIESDSFGWLIKVEEDLNVPRKVTLL 109
Query: 115 HPFSSGQN-LSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAV----CR 169
P +N + +F VLD +K R LG + + +G S A V C
Sbjct: 110 DPLCDTRNSIPENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCD 169
Query: 170 GEQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTG 229
G+ V++T ++ + +FR D +WT I +M + + +V +F GR VD G
Sbjct: 170 GDYKFVLLT------IHVSGKLAVFRSWDRAWTVINDMPSPY-DDVMLFDGRFFAVDNNG 222
Query: 230 RTFMIG-PDLTTHLIAEPVFGGKSKFLVESSEFELLLVDRY--------------ENYRV 274
RT ++ L L+A PVFGG KFL+ES E+LLVD Y E +
Sbjct: 223 RTVVVDYSSLKLTLVASPVFGGDKKFLIESCG-EMLLVDMYLSLEAVEGDPGFVEEIFEH 281
Query: 275 P--------VWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASE-LGFANGNCVI 325
P V V+R E+E+ WV + +L DK+LFLG+ +FSASAS+ L +G+ V
Sbjct: 282 PAFYMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSVF 341
Query: 326 YSKS-YGFHDLNIRKCK-MSVFHLDQGQASPLSDYPEYFKLFWPPPEWI 372
++ + + DL + + + VF G+ + PEY KLFWPPP WI
Sbjct: 342 FNGNVFNGEDLGAMQDRDLGVFDFRSGKIELVQKLPEYAKLFWPPPPWI 390
>At2g17036 F - Box like protein
Length = 404
Score = 143 bits (361), Expect = 1e-34
Identities = 124/405 (30%), Positives = 193/405 (47%), Gaps = 54/405 (13%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M DW+ LP +LL LIS+ L++ L++FRSVCS+WRS++ P + N+P FP +
Sbjct: 1 MMDWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPK---RLLWAHNLPFFPSDD 57
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIKP--PQHQPSLNPWLIRIGPDF--KGKTQLWHP 116
PF + N+I R+ +I LIKP PQ + L W++++ + K L P
Sbjct: 58 -KPF-LSNVI------LRVAHQSILLIKPNEPQCEADLFGWIVKVWDNIYVSRKMTLLKP 109
Query: 117 FSSGQN-LSSDFNNVLDFNKLSFRVLGCMSYFYLH---HLIGGYQSSFIHCVAAVCR--G 170
SS +N + D +K + R L C H + + G+ + + V +
Sbjct: 110 LSSSRNYFPQHLPRIFDMSKFTVREL-CREVKLYHPDYYCVPGHTALELELGKTVVKYLN 168
Query: 171 EQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGR 230
+ V++T E+ + +FR D WT I + S ++ +F GR +D GR
Sbjct: 169 DDKFVLLTILEYGK------LAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGR 222
Query: 231 TFMIG-PDLTTHLIAEPVF-GGKSKFLVESSEFELLLVD-----------------RYEN 271
T ++ L A P+ GG KFL+ES E+ LVD +
Sbjct: 223 TVVVDYSSFKLTLAANPLIGGGDKKFLIESCG-EMFLVDIEFCLNEKPEFTGGFYSYFNE 281
Query: 272 YRVPVWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASEL---GFANGNCV-IYS 327
V F+L E+EKRWV++ +LGDK+ FLG+ +FSAS +++ G+ V Y+
Sbjct: 282 TTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFYT 341
Query: 328 KSYGFHDLNIRKCKMSVFHLDQGQASPLSDYPEYFKLFWPPPEWI 372
++ R + VF G+ ++ PEY KLFWPPP WI
Sbjct: 342 HEESLVVMDDR--NLGVFDFRSGKTELVNKLPEYAKLFWPPPPWI 384
>At5g24040 putative protein
Length = 373
Score = 112 bits (280), Expect = 3e-25
Identities = 98/395 (24%), Positives = 182/395 (45%), Gaps = 49/395 (12%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M WS LP E+L LIS K+D L+ FRSVCS WRSSS+ +H S +P P
Sbjct: 1 MVKWSELPPEILHLISLKIDNPFDLIHFRSVCSFWRSSSLLKFRHMTSLRCPLPLDPGGC 60
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIK-PPQHQPSLNPWLIRIGPDFKGKTQLWHPFSS 119
D +I ++ ++L+K P + +P W+ ++ G+ L H
Sbjct: 61 GDDCHI-------------LSSRVYLLKCPNRDRPQY--WMFKLQAKENGEVVL-HSLFL 104
Query: 120 GQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSF--IHCVAA-------VCRG 170
+N SS + + + LS +L C + + Y F C++ +
Sbjct: 105 RRN-SSAYGCL--YPSLSIDLLNCQIFELAQEHVACYSEWFELFECISKCEERIGFMGLN 161
Query: 171 EQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGR 230
+ + G+ + G+ M+R D+ WT + +S + FKG+ +D+TG+
Sbjct: 162 REKNEYMILGKLSF----NGLAMYRSVDNRWTELEITPDSFFEGIVPFKGKFYAIDRTGK 217
Query: 231 TFMIGP--DLTTHLIAEPVFGGKSKFLVESSEFELLLVD-----RYENYRVP------VW 277
T ++ P ++ T + P + ++L+ + + +L+LV+ RY+ + +P +W
Sbjct: 218 TTVVDPTLEVNTFQRSRPCDKTRKRWLLMTGD-KLILVEMCTKSRYD-FHIPNIREKKIW 275
Query: 278 IDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFHDLNI 337
++ L+E+ W ++ ++ +VLFL + +FS A+E+ N +I+ +G + +
Sbjct: 276 FEISELNEERNDWDQVEDMDGRVLFLEHYCTFSCLATEIPGFRANSIIFMDLWGGSN-SY 334
Query: 338 RKCKMSVFHLDQGQASPLSDYPEYFKLFWPPPEWI 372
+ V+ ++ L D EY +LF PP W+
Sbjct: 335 ELESILVYEFNEKGVRSLRDKLEYIELFPFPPGWV 369
>At5g60060 putative protein
Length = 374
Score = 90.1 bits (222), Expect = 2e-18
Identities = 104/385 (27%), Positives = 165/385 (42%), Gaps = 45/385 (11%)
Query: 2 ADWSHLPSELLQLISQKLD----TVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFP 57
+ WS LP ++L+LIS +LD + LL RSVC+TWR S ++K+ S
Sbjct: 9 SQWSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLSKF------ 62
Query: 58 EPNFDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNP--WLIRIGPDFKGKTQLWH 115
P + PF + S + T L ++ ++ P LNP L+++ G ++
Sbjct: 63 -PKYLPFWSSSSSSSGFFT--LKQSNVYKLEAP-----LNPRTCLVKLQETTPGIMRVLD 114
Query: 116 PFSSGQN--LSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSF--IHC--VAAVCR 169
FS+ + L +F + +D + R++ + GG F +H V +
Sbjct: 115 LFSNDRICFLPENFPSKIDLQEFHVRLVRRTYRMEYANNGGGAVPCFWSLHSDKVVILSS 174
Query: 170 GEQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPC-VVDKT 228
GE ++ H G + D+ W + N N ++ ++K C VVD
Sbjct: 175 GEDSAIIAI-----HSGGKLGFLKSG-NDEKWKILDNSWNVIYEDIMLYKDNRCIVVDDK 228
Query: 229 GRTFMIGPDLTTHLIAEPVFGG--KSKFLVESSEFELLLVDRY--------ENYRVPVWI 278
G+T + D +AE + GG K LVE S E+ LVD+Y + + V
Sbjct: 229 GKTVIYDVDFKVSDLAEGLVGGGGHKKHLVECSGGEVFLVDKYVKTVWCKSDISKSVVEF 288
Query: 279 DVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSK-SYGFHDLNI 337
V+ L +EKRW ++ +LGD LF+G+ SFS + G G + YS G I
Sbjct: 289 RVYNLKREEKRWEEVRDLGDVALFIGDDCSFSVQ-NPAGDLAGGFIFYSDYRNGGRSRGI 347
Query: 338 RKCKMSVFHLDQGQASPLSDYPEYF 362
VF++D S P YF
Sbjct: 348 CSDGDGVFNVDMQGDFVFSIKPNYF 372
>At1g64840 hypothetical protein
Length = 384
Score = 75.1 bits (183), Expect = 6e-14
Identities = 84/349 (24%), Positives = 151/349 (43%), Gaps = 36/349 (10%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M +WS LP ELL LIS+ LD ++ RS+C +WRS+ S L+ + P
Sbjct: 2 MPNWSQLPEELLNLISKNLDNCFDVVHARSICRSWRSA------FPFPSSLSTLSYSLPT 55
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNPWLIR-IGPDFKGK-TQLWHPFS 118
F F + + T + I IFL + + + + I D +L P
Sbjct: 56 FAKFPL---VSKDLCTLKKIQ--IFLFRARNPAADIPEYFLGGIDQDQSNDHMELPSPLQ 110
Query: 119 SGQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPPVVVT 178
+ ++ N L ++++ + + Y+ +IG S + V PV
Sbjct: 111 CSVKVKFPQSDPFLVNMLDYQIIP-LGFQYI--MIGWDPESLANGYVGVAF---LPVKKN 164
Query: 179 CGE--FTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGP 236
G+ +++ R + W + S + + F+GR V G ++ P
Sbjct: 165 GGDEFVVLLRYRNHLLVLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDP 224
Query: 237 ---DLTTHLIAEPVFGGKSKFLVESSEFELLLVDRYENYRVPVWID-------VFRLDEK 286
+ T + +EP+ SK+L+ + EL LV+++ + +D V RLDE+
Sbjct: 225 YSLEQTLLMPSEPL--RSSKYLIPNGSDELFLVEKFNPFPEADVLDLSRFACRVSRLDEE 282
Query: 287 EKRWVKLANLGDKVLFLGNGYSFSASASELG---FANGNCVIYSKSYGF 332
+WV++ +LGD+VLF+G+ + SA EL +GN ++++ G+
Sbjct: 283 AGQWVEVIDLGDRVLFIGHFGNVCCSAKELPDGCGVSGNSILFTNEPGY 331
>At2g24245 unknown protein
Length = 374
Score = 70.1 bits (170), Expect = 2e-12
Identities = 101/371 (27%), Positives = 145/371 (38%), Gaps = 63/371 (16%)
Query: 1 MADWSHLPSELLQLISQKL-DTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEP 59
M DWS LP ELL +IS L D + RSVC +WRS+ P ++P FP
Sbjct: 13 MPDWSQLPEELLHIISTHLEDHYFDAVHARSVCRSWRST-FPFPSSLLRQSYSLPAFP-- 69
Query: 60 NFDPFNIRNIIKSKYITSRLITHTIFLIK----PPQHQPSLNPWLIRIGPDFKGK-TQLW 114
++SK + L +FL + P S +L +G D +L
Sbjct: 70 ----------LESKDLCCTLEKVPLFLFRVLTPPDAADASSEYFLGGLGQDKSNDHVELP 119
Query: 115 HPFSSGQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPP 174
P ++ + N L +++ + L +IG + A + EQ
Sbjct: 120 SPLQCSVKVNVPGTEPILMNMLDCQIIPLGHKYRL--MIGCNPEEY--SAAFLPLNEQGG 175
Query: 175 VVVTCGEFTHC-DINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFM 233
GEF D ++ R + W + S + + F+GR G TF+
Sbjct: 176 G----GEFVALLDCTDLFLVLRSTEMRWIRLEKPSTASCKELFTFRGRFYATFFNGDTFV 231
Query: 234 IGPD------LTTHLIAEPVFGGKSKFLVESSEFELLLVDR-YENYRVPVWIDVFRLDEK 286
I P LT H+ S FLV S EL LV + RV RLDE+
Sbjct: 232 IDPSSLEATPLTPHI--------DSNFLVPSGNEELFLVKTDFLRCRVS------RLDEE 277
Query: 287 EKRWVKLANLGDKVLFLGNGY-SFSASASELGFANG------------NCVIYSKSYGFH 333
WV++++LGD+VLFLG +F SA EL G V Y YG H
Sbjct: 278 AAEWVEVSDLGDRVLFLGGHLGNFYCSAKELPHGCGLTGDSILFTVGSRNVTYPYKYGVH 337
Query: 334 DLNIRKCKMSV 344
N RK + ++
Sbjct: 338 -TNKRKAEDNI 347
>At2g16290 hypothetical protein
Length = 415
Score = 65.1 bits (157), Expect = 6e-11
Identities = 47/153 (30%), Positives = 79/153 (50%), Gaps = 16/153 (10%)
Query: 191 MMMFRCGDDSWTTIPNMSNSHG-GNVCVFKGRPCVVDKTGRTFMIGPDLTTHLIAEPVFG 249
++M+R + SWT + ++ ++ FKG+ +D +GR + +L+ + P
Sbjct: 206 LVMYRSRNMSWTQVVEHPETYAYQDLVAFKGKFYALDSSGRGRVFVVELSLRVTEIPSVK 265
Query: 250 GKS----KFLVESSEFELLLVDR-------YENYRVPVWIDVFRLDEK--EKRWVKLANL 296
G + LV+ E ELLLV R Y+ Y + W VFRLDE+ +++WV++ L
Sbjct: 266 GSQYCSKESLVQLGE-ELLLVQRFIPAGRRYDEY-IYTWFKVFRLDEEGGKRKWVQVNYL 323
Query: 297 GDKVLFLGNGYSFSASASELGFANGNCVIYSKS 329
D+V+FLG S +L AN NC+++ S
Sbjct: 324 NDRVIFLGARTKLCCSVHKLPGANENCIVFLAS 356
Score = 46.2 bits (108), Expect = 3e-05
Identities = 21/37 (56%), Positives = 28/37 (74%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRS 37
MADWS LP++LL+LI L+T ++ FRSVC +WRS
Sbjct: 1 MADWSLLPNDLLELIVGHLETSFEIVLFRSVCRSWRS 37
>At2g17690 hypothetical protein
Length = 421
Score = 58.5 bits (140), Expect = 6e-09
Identities = 46/119 (38%), Positives = 56/119 (46%), Gaps = 23/119 (19%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSS-SIPNHKHKNSSPLNIPQFPEP 59
M DWS LP ELL LI+ +L +V+ L+RFRS+C +WRSS S N H SSPL
Sbjct: 1 MGDWSKLPEELLGLIALRLYSVIELIRFRSICKSWRSSASGVNKNHSLSSPLIY------ 54
Query: 60 NFDPFNI-------RNIIKSKY---ITSRLITHTIFLIKPPQHQPSLNPWLIRIGPDFK 108
F P I I SKY + SR + L P WLI+ D K
Sbjct: 55 -FKPLQIILARAQANGQILSKYHGTVLSRATFFRVTLASSPD-----QGWLIKSDTDLK 107
Score = 39.7 bits (91), Expect = 0.003
Identities = 24/89 (26%), Positives = 46/89 (50%), Gaps = 9/89 (10%)
Query: 280 VFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFHDLNIRK 339
V++ DE+ +WV++ +LGDK + + FS SA E N + ++ ++
Sbjct: 338 VYKNDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCLPNSIYFTDK--------KE 389
Query: 340 CKMSVFHLDQGQASPLSDYPE-YFKLFWP 367
++ VF LD G + +S+ + F++F P
Sbjct: 390 EEVKVFKLDDGSITTMSESEQSCFQMFVP 418
>At1g65770 hypothetical protein
Length = 360
Score = 56.2 bits (134), Expect = 3e-08
Identities = 93/391 (23%), Positives = 152/391 (38%), Gaps = 58/391 (14%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKN---SSPLNIPQFP 57
MADWS LP +LL +I+ +L + + L RFRS+C +WR SS+P KN + PL I P
Sbjct: 1 MADWSTLPVDLLNMIAGRLFSNIELKRFRSICRSWR-SSVPGAGKKNPFRTRPL-ILLNP 58
Query: 58 EPNFDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNPWLIRIGPDF-KGKTQLWHP 116
PN + R + ++++ P Q WLI+ D GK L P
Sbjct: 59 NPNKPLTDHRR--RGEFLSRSAFFRVTLSSSPSQ------GWLIKSDVDVSSGKLHLLDP 110
Query: 117 FSSGQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPPVV 176
S S +D ++ F + + +H ++ I A+ + ++
Sbjct: 111 LSRLPMEHS--RKRVDLSE--FTITEIREAYQVHDWRTRKETRPIFKRVALVKDKEGDNQ 166
Query: 177 VTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGP 236
V T G MM+ D T ++ V KG+ +D G + I
Sbjct: 167 VLGIRST------GKMMYW---DIKTWKAKEEGYEFSDIIVHKGQTYALDSIGIVYWIRS 217
Query: 237 DLTTHLIAEPVFGGKS---------------KFLVESSEFELLLVDRYENYRVPVWIDVF 281
DL + P+ G + + LV S ++ D Y V V+
Sbjct: 218 DL-KFIRFGPLVGDWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEYAKTVGFKVY 276
Query: 282 RLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFHDLNIRKCK 341
+ D+++ + +++ +LGDK + FS A E N + ++
Sbjct: 277 KFDDEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFTDD----------TM 326
Query: 342 MSVFHLDQGQASPLSD--YP---EYFKLFWP 367
+ VF LD G S + YP F++F P
Sbjct: 327 IKVFKLDNGNGSSIETTIYPYAQSCFQMFVP 357
>At1g65760 hypothetical protein
Length = 362
Score = 55.8 bits (133), Expect = 4e-08
Identities = 82/346 (23%), Positives = 139/346 (39%), Gaps = 43/346 (12%)
Query: 3 DWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPNFD 62
DWS+LP ELL +I L +V+ L RFRS+C +WRSS+ +++ P P +FD
Sbjct: 5 DWSNLPEELLHMIVLLLFSVVELKRFRSICRSWRSSTSGVNRNN-----PFPSRPRIHFD 59
Query: 63 PFNIRNIIKS--KYIT--SRLITHTIFLIKPPQHQPSLNPWLIRIGPDF-KGKTQLWHPF 117
P + + S YI+ ++ F + S W+I+ D G+ +L +
Sbjct: 60 PIDPSETLSSDDSYISRPGAFLSRAAF-FRVTLSSSSSKGWMIKSDMDINSGRFRLLNVL 118
Query: 118 SS-GQNLSSDFNNVLDFNKLSFR-VLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPPV 175
S L S+ ++L+F R ++ GYQ S PV
Sbjct: 119 SRYPLRLYSESIDLLEFTVSEIREAYTVLNTAKRRSATKGYQRS-------------APV 165
Query: 176 VVTCGEFTHCDINQGMMM---FRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTF 232
V GE H D G+ D + + H ++ V KG +++
Sbjct: 166 KVKEGE-GHRDGVLGIGRDGNINYWDGNVLSELKQMGDHFSDIIVHKG---LINSDLEIS 221
Query: 233 MIGPDLTTHLI------AEPVFGGKSKFLVE---SSEFELLLVDRYENYRVPVWIDVFRL 283
G L ++ V G ++VE + + D + N R V +++
Sbjct: 222 RFGTSLDENITDGCWGDLRFVEGCGELYIVERLPKNTRKRKAGDFFHNSRT-VGFKAYKM 280
Query: 284 DEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKS 329
DE+ +W+++ LGD +G FS A E+ N + Y+++
Sbjct: 281 DEELAKWIEIKTLGDNAFLMGTDTCFSVLAHEVYGCLPNSIYYTEN 326
>At3g25750 hypothetical protein
Length = 348
Score = 54.3 bits (129), Expect = 1e-07
Identities = 85/370 (22%), Positives = 142/370 (37%), Gaps = 58/370 (15%)
Query: 3 DWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPNFD 62
+WS LP ELL LI+ + + + +LR RS C +WRS+ + + QF +
Sbjct: 5 EWSDLPEELLDLIANRYSSNIDVLRIRSTCKSWRSAVAMSKERL--------QFRFERYL 56
Query: 63 PFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNPWLIRIGPDFK--GKTQLWHPFSSG 120
P +K I + L T F I P P+ WL+R K K L P SG
Sbjct: 57 P------TSNKKIKAHLSPTTFFRITLPSSCPN-KGWLVRTRQASKMYRKITLLCPL-SG 108
Query: 121 QNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPPVVVTCG 180
+ ++ + LD K+ + + S+ + + E+ P+
Sbjct: 109 ERITRS-HQTLDLLKVG---------------VSEIRQSYEIQIFDGLKDEKIPL---DS 149
Query: 181 EFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGPDLTT 240
E I + G SWT I N ++ + GR VD G + I L+
Sbjct: 150 EIFSNYIKNSDKIPSEGSRSWTKIKNQVEDF-SDIILHMGRIYAVDLKGAIWWI--SLSQ 206
Query: 241 HLIAEPVFGGKSKFLVESSEFELLLVD-------------RYENYRVPVWIDVFRLDEKE 287
I + + S + LV+ + + V V+++DE
Sbjct: 207 LTIVQQTSSTPLDYYKYDSCQDTRLVEYCGDLCIVHELSITRNHIQRTVGFKVYKMDEDL 266
Query: 288 KRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFHDLNIRKCKMSVFHL 347
+WV+++ LGD L + F+ ASE C+ S + ++D+ + + VF L
Sbjct: 267 AKWVEVSCLGDNTLIVACNSCFTVVASEY----HGCLKNSIYFSYYDVK-KAENIKVFKL 321
Query: 348 DQGQASPLSD 357
D G + +D
Sbjct: 322 DDGSITQRTD 331
>At2g24255 hypothetical protein
Length = 336
Score = 52.8 bits (125), Expect = 3e-07
Identities = 46/179 (25%), Positives = 80/179 (43%), Gaps = 18/179 (10%)
Query: 180 GEFTHC-DINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGPDL 238
GEF +++ +++ + W + N+ + ++ F+GR + +G+ +I P
Sbjct: 142 GEFVVLLEVSDTLLVLTSAEMRWKQLENVPYTICVDIVTFRGRFYALFLSGQIVVIDPYS 201
Query: 239 --TTHLIAEPVFGGKSKFLVESSEFELLLVDRYENYRVPVWID-----VFRLDEKEKRWV 291
T L++ P + + LV + EL LV+ V + V R+DEK +WV
Sbjct: 202 LEVTLLLSSPQDPRELRSLVPYGKDELFLVEVIIPNDVVIDFSRLARRVRRVDEKAGKWV 261
Query: 292 KLANLGDKVLFLGN----------GYSFSASASELGFANGNCVIYSKSYGFHDLNIRKC 340
++ +LGD VL LGN G+ + +A G +GN +Y K DL C
Sbjct: 262 EVGDLGDCVLLLGNLSCSAKEFPRGFGLTENAVLFGDQSGNAFLYYKQSAVKDLKGESC 320
>At1g65740 hypothetical protein
Length = 371
Score = 52.8 bits (125), Expect = 3e-07
Identities = 94/404 (23%), Positives = 154/404 (37%), Gaps = 73/404 (18%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M DWS LP ELL I+ + +++ RF S+C +W SS K+ + P +
Sbjct: 1 MVDWSTLPEELLHFIAARSFSLVEYKRFSSICVSWHSSVSGVKKNP------FHRRPLID 54
Query: 61 FDPFNIRNIIKSKYITS----RLITHTIFLIKPPQHQPSLNPWLIRIGPDF-KGKTQLWH 115
F+P + ++ S ++ F PS W+I+ D G+ L +
Sbjct: 55 FNPIAPSETLLEDHVFSCNPGAFLSRAAFFRVTLSSSPS-KGWIIKSDMDTNSGRFHLLN 113
Query: 116 PFSS-GQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIG-----GYQSSFIHCVAAVCR 169
P S +SS+ ++LDF + SY L G GYQ S +
Sbjct: 114 PLSRFPLRISSESLDLLDFTVSEIQ----ESYAVLKDAKGRLPNPGYQRSAL-------- 161
Query: 170 GEQPPVVVTCGEFTHCDI----NQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVV 225
V V G+ H I G + + G + M + H ++ V KG V+
Sbjct: 162 -----VKVKEGDDHHHGILGIGRDGTINYWNG-NVLNGFKQMGH-HFSDIIVHKGVTYVL 214
Query: 226 DKTGRTFMIGPDLTTH----LIAEPVFGGKSKFLVESSEF--ELLLVDRY--ENYRV--- 274
D G + I DL + E + G ++ + + EL ++ R EN R
Sbjct: 215 DSKGIVWCINSDLEMSRYETSLDENMTNGCRRYYMRFVDCCGELYVIKRLPKENSRKRKS 274
Query: 275 -------PVWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYS 327
V+++D++ +WV++ LGD + FS A E N + +
Sbjct: 275 TLFQFSRTAGFKVYKIDKELAKWVEVKTLGDNAFVMATDTCFSVLAHEYYGCLPNSIYF- 333
Query: 328 KSYGFHDLNIRKCKMSVFHLDQGQASPLSDYPE----YFKLFWP 367
I + VF LD G S ++ E F++F+P
Sbjct: 334 ---------IEDLEPKVFQLDNGNGSSITRKSESSESSFEMFFP 368
>At2g16320 pseudogene; similar to MURA transposase of maize
Mutator transposon
Length = 467
Score = 48.5 bits (114), Expect = 6e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHK 46
MADWS LP++LL+LI L+T ++ FRSVCS+WRS P + +
Sbjct: 1 MADWSLLPNDLLELIVGHLETSFEIVLFRSVCSSWRSVVPPQDQSR 46
Score = 43.5 bits (101), Expect = 2e-04
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 26/150 (17%)
Query: 191 MMMFRCGDDSWTTIPNMSNSHG-GNVCVFKGRPCVVDKTGRTFMIGPDLTTHLIAEPVFG 249
++M+R + SWT + + ++ FKG+ +D +GR + +L+ ++ P
Sbjct: 202 LVMYRSRNMSWTQVVEHPEKYAYQDLVAFKGKFYALDSSGRGRVFVVELSLEVMEIPSVR 261
Query: 250 GKSKFLVES---SEFELLLVDR-------YENYRVPVWIDVFRLDEKEKRWVKLANLGDK 299
G + E+ S ELLLV R Y+ Y + W VFRLDE+E R +
Sbjct: 262 GSQQSSKENLVLSGEELLLVQRFTPEVRHYDEY-LYTWFRVFRLDEEEGRETQT------ 314
Query: 300 VLFLGNGYSFSASASELGFANGNCVIYSKS 329
+ S +L A NC+++ +S
Sbjct: 315 --------NLCCSVHKLPCAKENCIVFIES 336
Score = 35.0 bits (79), Expect = 0.067
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 4 WSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRS 37
WS L ++LL+LI +T ++ RSVCS+WRS
Sbjct: 402 WSLLLNDLLKLIVGHFETSFEIVNLRSVCSSWRS 435
>At1g44080 hypothetical protein
Length = 311
Score = 45.1 bits (105), Expect = 7e-05
Identities = 20/53 (37%), Positives = 30/53 (55%)
Query: 4 WSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQF 56
WS L +L+ L++ L + + LLRFRS+C WRS+ + N N+P F
Sbjct: 6 WSDLHEDLIDLLANNLSSNINLLRFRSICKPWRSTVATKKRLHNHFERNLPTF 58
Score = 38.9 bits (89), Expect = 0.005
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 175 VVVTCGEFTHCDINQGMMMFRCGDDS--WTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTF 232
VV F D + + G+++ WT I N ++ + KG+ +D TG +
Sbjct: 102 VVFLDNVFFVVDFKNEIWCCKSGEETRHWTRINNEEAKGFLDIILHKGKIYALDLTGAIW 161
Query: 233 MI----------GPDLTTHLIAEPVFGGKSKFLVESSEFELLLVDR-YENYRVP------ 275
I GP +T + + K K LVE EL +V R Y+ + V
Sbjct: 162 WISLSELSIYQYGP--STPVDFYEIDNCKEKRLVEYCG-ELCVVHRFYKKFCVKRVLTER 218
Query: 276 -VWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFHD 334
V V+++D+ WV++++LGDK L + F ASE N + ++ D
Sbjct: 219 TVCFKVYKMDKNLVEWVEVSSLGDKALIVATDNCFLVLASEYYGCLENAIYFNDR---ED 275
Query: 335 LNIRKCKMSVFHLDQGQASPLSDYPEYFKLF 365
+++ K Q +S S + F++F
Sbjct: 276 VSVFKLDDCSIITKQINSSSSSSHQSCFQMF 306
>At4g25920 unknown protein
Length = 390
Score = 44.3 bits (103), Expect = 1e-04
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 20/139 (14%)
Query: 239 TTHLIAEPVFGGKSKFLVESSEFELLLVDRYENYRVPVWIDVFRLDEKE-----KRWVKL 293
T HL+ P FLV+ +L +D Y V VF+ EK K+ +
Sbjct: 255 TDHLVESPT---GQLFLVKWYGEDLEDIDNTTLYNVTKKFMVFKEGEKPSCVYTKKMIYT 311
Query: 294 ANLGDKVLFLGNGYSFSASASELGFANGNCVIY-SKSYGFHDLNIRKCKMSVFHLDQGQA 352
++GD +F+G+ +F AS NC+ + ++G +DL + C M + D
Sbjct: 312 EDIGDLCIFVGHSEAFCVPASSSPGLKPNCIYFVGYNFGVYDLTTKTCTMFLTKDD---- 367
Query: 353 SPLS--DYPEYFKLFWPPP 369
+PL ++P +WPPP
Sbjct: 368 NPLRKLEFP-----YWPPP 381
>At4g14260 hypothetical protein
Length = 475
Score = 42.0 bits (97), Expect = 6e-04
Identities = 40/134 (29%), Positives = 60/134 (43%), Gaps = 23/134 (17%)
Query: 251 KSKFLVESSEFELLLV--------DRYENYRVPVW--IDVFRL----DEKEKRWVKLANL 296
K+ LVES +L LV D +N + V VFR DEK+K + ++
Sbjct: 346 KTDHLVESPTGQLFLVKWFVEDVEDLCDNTPMHVTKKFMVFRANEASDEKKKTMIYTEHI 405
Query: 297 GDKVLFLGNGYSFSASASELGFANGNCVIY-SKSYGFHDLNIRKCKMSVFHLDQGQASPL 355
GD +FLG+ +F AS NC+ + ++G +DL C S F+ +
Sbjct: 406 GDLCIFLGHSEAFCIPASTSCGLEPNCIYFVGNNFGVYDLTTETC--STFYTSVRPLKNV 463
Query: 356 SDYPEYFKLFWPPP 369
S +P +WPPP
Sbjct: 464 S-FP-----YWPPP 471
>At2g26160 hypothetical protein
Length = 359
Score = 41.2 bits (95), Expect = 0.001
Identities = 88/393 (22%), Positives = 147/393 (37%), Gaps = 67/393 (17%)
Query: 3 DWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPNFD 62
+WS LP +L+ L + + ++ +LR RS+C WRS++ S N+P
Sbjct: 5 EWSELPGDLINLTANRFSSISDVLRVRSICKPWRSAAAT----PKSFQCNLPS------- 53
Query: 63 PFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNPWLIRIGP-DFKGKTQLWHPFSSGQ 121
+K I + L T F + P S WLIR K L PF +
Sbjct: 54 --------SNKMIETVLSPTTFFRVTGPS-SCSYKGWLIRTKQVSESSKINLLSPFF--R 102
Query: 122 NLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPPVVVTCGE 181
L + LD L F V + + H+ Y + V E P +++
Sbjct: 103 QLLTPSQQTLDL--LKFEVSEIRQSYEI-HIFDKY------LIQGVIGKEGPSHILSRVV 153
Query: 182 FTH---CDINQGMMMFRC--GDDS---WTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFM 233
F + Q ++ C G++S WT I N ++ + KG+ +D TG +
Sbjct: 154 FLDNLIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDF-LDIILHKGQVYALDLTGAIWW 212
Query: 234 IGPDLTTHLIAEPV-------FGGKSKFLVESSE-----FELLLVDRY-ENYRVPVWIDV 280
I + L P + +K LVE +L L Y + V V
Sbjct: 213 ISLSPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCIIHQLRLKKAYIRRSQRTVGFKV 272
Query: 281 FRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFH---DLNI 337
+++DE +WV+ D+ + +SE N + + + G + +N
Sbjct: 273 YKMDEYVAKWVESGAEADQFI------KHDDESSEYHGLLKNYIYFDDNDGEYCNDGMND 326
Query: 338 RKCKMSVFHLDQGQASPLSDYPEY--FKLFWPP 368
KM F L G +++ + F +F+PP
Sbjct: 327 EAVKM--FKLGDGSIIDSTEFSSHSCFHMFFPP 357
>At5g46140 putative protein
Length = 313
Score = 40.8 bits (94), Expect = 0.001
Identities = 39/137 (28%), Positives = 59/137 (42%), Gaps = 26/137 (18%)
Query: 251 KSKFLVESSEFELLLVDRYE------NYRVPVWID------VFR-----LDEKEKRWVKL 293
++ +VESS E L+ Y NY+ I VFR D K K
Sbjct: 179 RTDHMVESSSGEQFLISWYYGDECKLNYKELTVIHNTKQFKVFREKEELTDRKTKFMSYT 238
Query: 294 ANLGDKVLFLGNGYSFSASASELGFANGNCVIYS-KSYGFHDLNIRKCKMSVFHLDQGQA 352
N+GD +FLG+G + AS + NC+ ++ +YG D+ + C + F D+G
Sbjct: 239 ENIGDLCIFLGHGEALCIPASTIPGLKPNCIYFAGHNYGVFDITTQTCYL--FSTDEGLL 296
Query: 353 SPLSDYPEYFKLFWPPP 369
S + +P WP P
Sbjct: 297 SS-TQFPS-----WPHP 307
>At4g35740 putative protein
Length = 926
Score = 39.7 bits (91), Expect = 0.003
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 4 WSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSS 38
WS LP ELL I+ L + + LLRFRS+C T+RS+
Sbjct: 7 WSDLPGELLDHIANGLFSKVELLRFRSICKTFRSA 41
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.324 0.140 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,846,731
Number of Sequences: 26719
Number of extensions: 450689
Number of successful extensions: 1010
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 936
Number of HSP's gapped (non-prelim): 86
length of query: 377
length of database: 11,318,596
effective HSP length: 101
effective length of query: 276
effective length of database: 8,619,977
effective search space: 2379113652
effective search space used: 2379113652
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Medicago: description of AC122162.7