BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122162.15 - phase: 0
(342 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17027 F - Box like protein 139 3e-33
At2g17036 F - Box like protein 132 2e-31
At5g24040 putative protein 87 2e-17
At5g60060 putative protein 79 3e-15
At3g25750 hypothetical protein 72 4e-13
At1g64840 hypothetical protein 70 1e-12
At1g65740 hypothetical protein 68 8e-12
At1g65770 hypothetical protein 65 4e-11
At2g26160 hypothetical protein 59 3e-09
At2g24255 hypothetical protein 52 4e-07
At1g65760 hypothetical protein 52 5e-07
At2g24245 unknown protein 52 6e-07
At2g16290 hypothetical protein 50 2e-06
At2g17690 hypothetical protein 47 2e-05
At1g44080 hypothetical protein 45 4e-05
At2g16320 pseudogene; similar to MURA transposase of maize Muta... 45 6e-05
At5g14160 putative protein 43 3e-04
At4g22030 putative protein 42 4e-04
At4g22180 putative protein 42 6e-04
At2g05970 hypothetical protein 40 0.002
>At2g17027 F - Box like protein
Length = 427
Score = 139 bits (349), Expect = 3e-33
Identities = 107/359 (29%), Positives = 172/359 (47%), Gaps = 60/359 (16%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHS-----SPIPNDHNILPFQFPLLKY 58
VDW+ LP+D+L LIS+ L+ DLI+FRSVCS+W S SP+P H P+L
Sbjct: 2 VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHH------LPIL-- 53
Query: 59 VPAPDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITK- 117
PD N + D+ LS+RS L+KP + + ++ WLI++ +
Sbjct: 54 ---PD--NGGSLFPDSAVGFR-----LSQRSILLIKPHEPCIESDSF----GWLIKVEED 99
Query: 118 -NSSGKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYL 176
N K LL+ P +++ + P ++ KF + L +F + + YL
Sbjct: 100 LNVPRKVTLLD-PLCDTRNSIPENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYL 158
Query: 177 YPQTVLAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRFYV 236
V + C G VL T+ + S K +F D+ WT ++++ + D+ LF GRF+
Sbjct: 159 EKAVVKYLDCDGDYKFVLLTI-HVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFA 217
Query: 237 LDQSGQTVTVGPDS-STELAAHPLYQRCVRGKNRKLLVESEGELLLLDI----------- 284
+D +G+TV V S L A P++ G ++K L+ES GE+LL+D+
Sbjct: 218 VDNNGRTVVVDYSSLKLTLVASPVF-----GGDKKFLIESCGEMLLVDMYLSLEAVEGDP 272
Query: 285 --------HQTFFQ----FSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL 331
H F+ K+++ E + W + L D++LF+G +FSASA D+
Sbjct: 273 GFVEEIFEHPAFYMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDI 331
>At2g17036 F - Box like protein
Length = 404
Score = 132 bits (333), Expect = 2e-31
Identities = 108/369 (29%), Positives = 178/369 (47%), Gaps = 60/369 (16%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPN----DHNILPFQFPLLKYV 59
+DW LP+D+L LIS+ L+ DLI+FRSVCS+W S+ P HN LPF FP
Sbjct: 2 MDWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHN-LPF-FP----- 54
Query: 60 PAPDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKN- 118
+++ + N+ ++ +S L+KP + Q + + W++++ N
Sbjct: 55 ------SDDKPFLSNV------ILRVAHQSILLIKPNEPQCEADLF----GWIVKVWDNI 98
Query: 119 -SSGKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSY-L 176
S K LL P S ++ HLP + KF+ + L + + D+ H + L
Sbjct: 99 YVSRKMTLLK-PLSSSRNYFPQHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALEL 157
Query: 177 YPQTVLAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSN-LSTANGDICLFKGRFY 235
+ + K ++L L Y K +F D+ WT +++ + + D+ +F GRF+
Sbjct: 158 ELGKTVVKYLNDDKFVLLTILEY--GKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFF 215
Query: 236 VLDQSGQTVTVGPDS-STELAAHPLYQRCVRGKNRKLLVESEGELLLLDI---------- 284
+D +G+TV V S LAA+PL + G ++K L+ES GE+ L+DI
Sbjct: 216 AIDYNGRTVVVDYSSFKLTLAANPL----IGGGDKKFLIESCGEMFLVDIEFCLNEKPEF 271
Query: 285 --------HQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL---CL 333
++T + K FKL E K+W +++ LGD++ F+G +FSAS D+ C+
Sbjct: 272 TGGFYSYFNETTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCV 331
Query: 334 PKGKLCHLY 342
G Y
Sbjct: 332 GTGSFVFFY 340
>At5g24040 putative protein
Length = 373
Score = 86.7 bits (213), Expect = 2e-17
Identities = 82/354 (23%), Positives = 155/354 (43%), Gaps = 67/354 (18%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKYVPAPD 63
V W+ELP +IL LIS ++D DLI FRSVCS W SS + ++ + PL P
Sbjct: 2 VKWSELPPEILHLISLKIDNPFDLIHFRSVCSFWRSSSLLKFRHMTSLRCPLPL---DPG 58
Query: 64 SINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSSGKT 123
++ C++ +L+K P + Q W+ ++ +G+
Sbjct: 59 GCGDD--------------CHILSSRVYLLKCPNRDRPQY-------WMFKLQAKENGEV 97
Query: 124 QLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYPQTVLA 183
+L+ F+ S+A+ L +++ + Q F +H + Y +
Sbjct: 98 -VLHSLFLRRNSSAYGCLYPSLSIDLLNCQI-----------FELAQEHVA-CYSEWFEL 144
Query: 184 VTCHGK---------------KPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTANGD-I 227
C K + ++LG LS+ + ++ D RWT + + + I
Sbjct: 145 FECISKCEERIGFMGLNREKNEYMILGKLSF--NGLAMYRSVDNRWTELEITPDSFFEGI 202
Query: 228 CLFKGRFYVLDQSGQTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLLLDIHQT 287
FKG+FY +D++G+T V P + E+ + C + + R LL+ + +L+ ++
Sbjct: 203 VPFKGKFYAIDRTGKTTVVDP--TLEVNTFQRSRPCDKTRKRWLLMTGDKLILVEMCTKS 260
Query: 288 FFQFSM----------KIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL 331
+ F + +I +L+E R W++++ + R+LF+ C+FS A ++
Sbjct: 261 RYDFHIPNIREKKIWFEISELNEERNDWDQVEDMDGRVLFLEHYCTFSCLATEI 314
>At5g60060 putative protein
Length = 374
Score = 79.3 bits (194), Expect = 3e-15
Identities = 94/355 (26%), Positives = 160/355 (44%), Gaps = 80/355 (22%)
Query: 6 WTELPRDILFLISQRLDVE----LDLIRFRSVCSTWHSS-PIPNDHNILPFQFPLLKYVP 60
W++LP DIL LIS RLD + + L+ RSVC+TW S P+ N +N L +FP KY+P
Sbjct: 11 WSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLS-KFP--KYLP 67
Query: 61 APDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSS 120
S +++++ F L + + + ++ P + R L+++ + +
Sbjct: 68 FWSS-----------SSSSSGFFTLKQSNVYKLEAP---------LNPRTCLVKLQETTP 107
Query: 121 GKTQLLNPPFVSLKSTAF--SHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYP 178
G ++L+ S F + P+ ++ +F + +R + ++ + N G
Sbjct: 108 GIMRVLD--LFSNDRICFLPENFPSKIDLQEFHVRLVRRTYRME-----YANNGGG---- 156
Query: 179 QTVLAVTC----HGKKPLVLGTLSYCSSKPVLFHD----------QDKRWTPVSNL-STA 223
AV C H K ++L + S + H D++W + N +
Sbjct: 157 ----AVPCFWSLHSDKVVILSSGE--DSAIIAIHSGGKLGFLKSGNDEKWKILDNSWNVI 210
Query: 224 NGDICLFK-GRFYVLDQSGQTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVE-SEGELLL 281
DI L+K R V+D G+TV D A L G ++K LVE S GE+ L
Sbjct: 211 YEDIMLYKDNRCIVVDDKGKTVIYDVDFKVSDLAEGLVGG---GGHKKHLVECSGGEVFL 267
Query: 282 LD-----------IHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSFS 325
+D I ++ +F +++ L K+WE+++ LGD LF+G CSFS
Sbjct: 268 VDKYVKTVWCKSDISKSVVEF--RVYNLKREEKRWEEVRDLGDVALFIGDDCSFS 320
>At3g25750 hypothetical protein
Length = 348
Score = 72.0 bits (175), Expect = 4e-13
Identities = 83/342 (24%), Positives = 131/342 (38%), Gaps = 64/342 (18%)
Query: 1 MASVDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKYVP 60
M +W++LP ++L LI+ R +D++R RS C +W S+ + + QF +Y+P
Sbjct: 1 MEKTEWSDLPEELLDLIANRYSSNIDVLRIRSTCKSWRSAVAMSKERL---QFRFERYLP 57
Query: 61 APDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSS 120
+N +I +LS +FF + P + L+R R
Sbjct: 58 T-----SNKKIK----------AHLSPTTFFRITLPSSCPNKGWLVRTRQ-----ASKMY 97
Query: 121 GKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYPQT 180
K LL P L + ++ +K +R + I D
Sbjct: 98 RKITLLCP----LSGERITRSHQTLDLLKVGVSEIRQSYEIQIFDGLKDE---------- 143
Query: 181 VLAVTCHGKKPLVLGTLS-YCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRFYVLDQ 239
K PL S Y + + + + WT + N DI L GR Y +D
Sbjct: 144 --------KIPLDSEIFSNYIKNSDKIPSEGSRSWTKIKNQVEDFSDIILHMGRIYAVDL 195
Query: 240 SG--------QTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLL---LDIHQTF 288
G Q V SST L + Y C + LVE G+L + L I +
Sbjct: 196 KGAIWWISLSQLTIVQQTSSTPLDYYK-YDSCQDTR----LVEYCGDLCIVHELSITRNH 250
Query: 289 FQFSM--KIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASA 328
Q ++ K++K+DE+ KW ++ LGD L V F+ A
Sbjct: 251 IQRTVGFKVYKMDEDLAKWVEVSCLGDNTLIVACNSCFTVVA 292
>At1g64840 hypothetical protein
Length = 384
Score = 70.5 bits (171), Expect = 1e-12
Identities = 84/339 (24%), Positives = 139/339 (40%), Gaps = 42/339 (12%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSS-PIPNDHNILPFQFPLLKYVPAPD 63
+W++LP ++L LIS+ LD D++ RS+C +W S+ P P+ + L + P P
Sbjct: 4 NWSQLPEELLNLISKNLDNCFDVVHARSICRSWRSAFPFPSSLSTLSYSLPTFAKFPL-- 61
Query: 64 SINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSSGK- 122
+ C L K FL + +L I ++ S
Sbjct: 62 --------------VSKDLCTLKKIQIFLFRARNPAADIPEY-----FLGGIDQDQSNDH 102
Query: 123 TQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFI-IDEDDFTFQNQHGSYLYPQTV 181
+L +P S+K P VN + + L +I I D + N + +
Sbjct: 103 MELPSPLQCSVKVKFPQSDPFLVNMLDYQIIPLGFQYIMIGWDPESLANGYVGVAF---- 158
Query: 182 LAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTAN-GDICLFKGRFYVLDQS 240
L V +G V+ L Y + VL + RW V S A+ + F+GRFYV +
Sbjct: 159 LPVKKNGGDEFVV-LLRYRNHLLVL-RSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLN 216
Query: 241 GQTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLLLDIHQTF--------FQFS 292
G P S + P +R ++ L+ EL L++ F +F+
Sbjct: 217 GDIYVFDPYSLEQTLLMP--SEPLRS-SKYLIPNGSDELFLVEKFNPFPEADVLDLSRFA 273
Query: 293 MKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL 331
++ +LDE +W ++ LGDR+LF+G + SA +L
Sbjct: 274 CRVSRLDEEAGQWVEVIDLGDRVLFIGHFGNVCCSAKEL 312
>At1g65740 hypothetical protein
Length = 371
Score = 67.8 bits (164), Expect = 8e-12
Identities = 86/357 (24%), Positives = 144/357 (40%), Gaps = 56/357 (15%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPF-QFPLLKYVPAP 62
VDW+ LP ++L I+ R ++ RF S+C +WHSS N PF + PL+ + P
Sbjct: 2 VDWSTLPEELLHFIAARSFSLVEYKRFSSICVSWHSSVSGVKKN--PFHRRPLIDFNPIA 59
Query: 63 DSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKN-SSG 121
S + D++ + N +LS+ +FF V + W+I+ + +SG
Sbjct: 60 PS---ETLLEDHVFSCNPG-AFLSRAAFFRVTLSSSPS--------KGWIIKSDMDTNSG 107
Query: 122 KTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYPQTV 181
+ LLNP L +++ + F+ ++ + + +D G Y ++
Sbjct: 108 RFHLLNP----LSRFPLRISSESLDLLDFTVSEIQESYAVLKDAKGRLPNPG---YQRSA 160
Query: 182 LAVTCHGKKPL--VL-----GTLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRF 234
L G +L GT++Y + + + DI + KG
Sbjct: 161 LVKVKEGDDHHHGILGIGRDGTINYWNGNVL---------NGFKQMGHHFSDIIVHKGVT 211
Query: 235 YVLDQSGQTVTVGPDSSTELAAHPLYQRCVRGKNRKLL--VESEGELLLL---------D 283
YVLD G + D L + G R + V+ GEL ++
Sbjct: 212 YVLDSKGIVWCINSDLEMSRYETSLDENMTNGCRRYYMRFVDCCGELYVIKRLPKENSRK 271
Query: 284 IHQTFFQFS----MKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL--CLP 334
T FQFS K++K+D+ KW ++K LGD + + FS A + CLP
Sbjct: 272 RKSTLFQFSRTAGFKVYKIDKELAKWVEVKTLGDNAFVMATDTCFSVLAHEYYGCLP 328
>At1g65770 hypothetical protein
Length = 360
Score = 65.5 bits (158), Expect = 4e-11
Identities = 83/341 (24%), Positives = 139/341 (40%), Gaps = 52/341 (15%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQF-PLLKYVPAPD 63
DW+ LP D+L +I+ RL ++L RFRS+C +W SS +P PF+ PL+ P P
Sbjct: 3 DWSTLPVDLLNMIAGRLFSNIELKRFRSICRSWRSS-VPGAGKKNPFRTRPLILLNPNP- 60
Query: 64 SINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKN-SSGK 122
N + D+ +LS+ +FF V Q WLI+ + SSGK
Sbjct: 61 ----NKPLTDHRRRGE----FLSRSAFFRVTLSSSPSQ--------GWLIKSDVDVSSGK 104
Query: 123 TQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYPQTVL 182
LL+P L H V+ +F+ +R + + + + ++ + L
Sbjct: 105 LHLLDP----LSRLPMEHSRKRVDLSEFTITEIREAYQVHD---WRTRKETRPIFKRVAL 157
Query: 183 AVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRFYVLDQSGQ 242
G + L S+ +++ D K W DI + KG+ Y LD G
Sbjct: 158 VKDKEGDNQV----LGIRSTGKMMYWD-IKTW-KAKEEGYEFSDIIVHKGQTYALDSIGI 211
Query: 243 TVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLLLD-----------IHQTFFQF 291
+ D + PL + LVE GE +++ T +++
Sbjct: 212 VYWIRSDLKF-IRFGPLVGDWTGDRR---LVECCGEFYIVERLVGESTWKRKADDTGYEY 267
Query: 292 S----MKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASA 328
+ K++K D+ + K ++K LGD+ + + FS A
Sbjct: 268 AKTVGFKVYKFDDEQGKMMEVKSLGDKAFVIATDTCFSVLA 308
>At2g26160 hypothetical protein
Length = 359
Score = 59.3 bits (142), Expect = 3e-09
Identities = 76/324 (23%), Positives = 130/324 (39%), Gaps = 61/324 (18%)
Query: 1 MASVDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKYVP 60
M +W+ELP D++ L + R D++R RS+C W S+ P F
Sbjct: 1 MEKPEWSELPGDLINLTANRFSSISDVLRVRSICKPWRSAA------ATPKSFQC----- 49
Query: 61 APDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSS 120
++ ++N++I+ + LS +FF V P + LIR + Q++++S
Sbjct: 50 ---NLPSSNKMIETV---------LSPTTFFRVTGPSSCSYKGWLIRTK----QVSESS- 92
Query: 121 GKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIID-EDDFTFQNQHGSYLYPQ 179
K LL+P F L + + ++ +KF +R + I D + Q G
Sbjct: 93 -KINLLSPFFRQLLTPS----QQTLDLLKFEVSEIRQSYEIHIFDKYLIQGVIGKEGPSH 147
Query: 180 TVLAVTCHGKKPLVLG---TLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRFYV 236
+ V +G + C S + + WT + N DI L KG+ Y
Sbjct: 148 ILSRVVFLDNLIFAVGQDDKIWCCKSG----EESSRIWTKIKNQVEDFLDIILHKGQVYA 203
Query: 237 LDQSGQT--VTVGPDSSTELAA-----HPLYQRCVRGKNRKLLVESEGELLLLD------ 283
LD +G +++ P S + + Y C K LVE G+L ++
Sbjct: 204 LDLTGAIWWISLSPLSLLQFTPSIPMDYDGYDSC-----NKRLVEYCGDLCIIHQLRLKK 258
Query: 284 --IHQTFFQFSMKIFKLDENRKKW 305
I ++ K++K+DE KW
Sbjct: 259 AYIRRSQRTVGFKVYKMDEYVAKW 282
>At2g24255 hypothetical protein
Length = 336
Score = 52.4 bits (124), Expect = 4e-07
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 211 DKRWTPVSNLS-TANGDICLFKGRFYVLDQSGQTVTVGPDS--STELAAHPLYQRCVR-- 265
+ RW + N+ T DI F+GRFY L SGQ V + P S T L + P R +R
Sbjct: 161 EMRWKQLENVPYTICVDIVTFRGRFYALFLSGQIVVIDPYSLEVTLLLSSPQDPRELRSL 220
Query: 266 ---GKNRKLLVESEGELLLLDIHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGS-G 321
GK+ LVE ++ D+ F + + ++ ++DE KW ++ LGD +L +G+
Sbjct: 221 VPYGKDELFLVE---VIIPNDVVIDFSRLARRVRRVDEKAGKWVEVGDLGDCVLLLGNLS 277
Query: 322 CS 323
CS
Sbjct: 278 CS 279
>At1g65760 hypothetical protein
Length = 362
Score = 52.0 bits (123), Expect = 5e-07
Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 42/347 (12%)
Query: 1 MASVDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPI-PNDHNILPFQFPLLKYV 59
M DW+ LP ++L +I L ++L RFRS+C +W SS N +N P + P + +
Sbjct: 1 MVDCDWSNLPEELLHMIVLLLFSVVELKRFRSICRSWRSSTSGVNRNNPFPSR-PRIHF- 58
Query: 60 PAPDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKN- 118
D I+ + + + + + +LS+ +FF V + W+I+ +
Sbjct: 59 ---DPIDPSETLSSDDSYISRPGAFLSRAAFFRVTLSSSSS--------KGWMIKSDMDI 107
Query: 119 SSGKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYP 178
+SG+ +LLN L +++ ++F+ +R + + + ++ Y
Sbjct: 108 NSGRFRLLN----VLSRYPLRLYSESIDLLEFTVSEIREAYTV-LNTAKRRSATKGYQRS 162
Query: 179 QTVLAVTCHGKKPLVL-----GTLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGR 233
V G + VL G ++Y + + + + DI + KG
Sbjct: 163 APVKVKEGEGHRDGVLGIGRDGNINYWDGNVL---------SELKQMGDHFSDIIVHKGL 213
Query: 234 FYVLDQSGQTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLLLDIHQTFFQFS- 292
+ + T ++ T+ L R V G +VE + FF S
Sbjct: 214 INSDLEISRFGTSLDENITDGCWGDL--RFVEGCGELYIVERLPKNTRKRKAGDFFHNSR 271
Query: 293 ---MKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL--CLP 334
K +K+DE KW ++K LGD +G+ FS A ++ CLP
Sbjct: 272 TVGFKAYKMDEELAKWIEIKTLGDNAFLMGTDTCFSVLAHEVYGCLP 318
>At2g24245 unknown protein
Length = 374
Score = 51.6 bits (122), Expect = 6e-07
Identities = 41/134 (30%), Positives = 65/134 (47%), Gaps = 12/134 (8%)
Query: 200 CSSKPVLFHDQDKRWTPVSNLSTAN-GDICLFKGRFYVLDQSGQTVTVGPDSSTELAAHP 258
C+ ++ + RW + STA+ ++ F+GRFY +G T + P S L A P
Sbjct: 185 CTDLFLVLRSTEMRWIRLEKPSTASCKELFTFRGRFYATFFNGDTFVIDPSS---LEATP 241
Query: 259 LYQRCVRGKNRKLLVESEGELLLLDIHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFV 318
L + LV S E L L + F + ++ +LDE +W ++ LGDR+LF+
Sbjct: 242 LTPHI----DSNFLVPSGNEELFL-VKTDFLR--CRVSRLDEEAAEWVEVSDLGDRVLFL 294
Query: 319 GSGC-SFSASALDL 331
G +F SA +L
Sbjct: 295 GGHLGNFYCSAKEL 308
Score = 38.1 bits (87), Expect = 0.007
Identities = 18/42 (42%), Positives = 27/42 (63%), Gaps = 2/42 (4%)
Query: 5 DWTELPRDILFLISQRL-DVELDLIRFRSVCSTWHSS-PIPN 44
DW++LP ++L +IS L D D + RSVC +W S+ P P+
Sbjct: 15 DWSQLPEELLHIISTHLEDHYFDAVHARSVCRSWRSTFPFPS 56
>At2g16290 hypothetical protein
Length = 415
Score = 49.7 bits (117), Expect = 2e-06
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Query: 205 VLFHDQDKRWTPVSNL--STANGDICLFKGRFYVLDQSGQTVTVGPDSS---TELAAHPL 259
V++ ++ WT V + A D+ FKG+FY LD SG+ + S TE+ +
Sbjct: 207 VMYRSRNMSWTQVVEHPETYAYQDLVAFKGKFYALDSSGRGRVFVVELSLRVTEIPSVKG 266
Query: 260 YQRCVRGKNRKLLVESEGELLLLD-------IHQTFFQFSMKIFKLDE--NRKKWEKLKK 310
Q C +++ LV+ ELLL+ + + K+F+LDE ++KW ++
Sbjct: 267 SQYC----SKESLVQLGEELLLVQRFIPAGRRYDEYIYTWFKVFRLDEEGGKRKWVQVNY 322
Query: 311 LGDRILFVGS 320
L DR++F+G+
Sbjct: 323 LNDRVIFLGA 332
Score = 45.1 bits (105), Expect = 6e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHN 47
DW+ LP D+L LI L+ +++ FRSVC +W S P DH+
Sbjct: 3 DWSLLPNDLLELIVGHLETSFEIVLFRSVCRSWRSVVPPLDHS 45
>At2g17690 hypothetical protein
Length = 421
Score = 47.0 bits (110), Expect = 2e-05
Identities = 23/58 (39%), Positives = 38/58 (64%), Gaps = 5/58 (8%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSP--IPNDHNILPFQFPLLKYVP 60
DW++LP ++L LI+ RL ++LIRFRS+C +W SS + +H++ PL+ + P
Sbjct: 3 DWSKLPEELLGLIALRLYSVIELIRFRSICKSWRSSASGVNKNHSL---SSPLIYFKP 57
Score = 37.4 bits (85), Expect = 0.012
Identities = 17/43 (39%), Positives = 26/43 (59%), Gaps = 2/43 (4%)
Query: 294 KIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL--CLP 334
K++K DE KW ++K LGD+ + + + FS SA + CLP
Sbjct: 337 KVYKNDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCLP 379
>At1g44080 hypothetical protein
Length = 311
Score = 45.4 bits (106), Expect = 4e-05
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 25/135 (18%)
Query: 209 DQDKRWTPVSNLSTANG--DICLFKGRFYVLDQSGQTVTVGPDSSTELAAH------PLY 260
++ + WT ++N A G DI L KG+ Y LD +G + S +EL+ + P+
Sbjct: 125 EETRHWTRINN-EEAKGFLDIILHKGKIYALDLTGAIWWI---SLSELSIYQYGPSTPVD 180
Query: 261 QRCVRGKNRKLLVESEGELLLLDIHQTFFQFSMK-----------IFKLDENRKKWEKLK 309
+ K LVE GEL + +H+ + +F +K ++K+D+N +W ++
Sbjct: 181 FYEIDNCKEKRLVEYCGELCV--VHRFYKKFCVKRVLTERTVCFKVYKMDKNLVEWVEVS 238
Query: 310 KLGDRILFVGSGCSF 324
LGD+ L V + F
Sbjct: 239 SLGDKALIVATDNCF 253
Score = 41.6 bits (96), Expect = 6e-04
Identities = 15/40 (37%), Positives = 26/40 (64%)
Query: 1 MASVDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSS 40
M V W++L D++ L++ L ++L+RFRS+C W S+
Sbjct: 1 MGKVGWSDLHEDLIDLLANNLSSNINLLRFRSICKPWRST 40
>At2g16320 pseudogene; similar to MURA transposase of maize
Mutator transposon
Length = 467
Score = 45.1 bits (105), Expect = 6e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHN 47
DW+ LP D+L LI L+ +++ FRSVCS+W S P D +
Sbjct: 3 DWSLLPNDLLELIVGHLETSFEIVLFRSVCSSWRSVVPPQDQS 45
Score = 38.1 bits (87), Expect = 0.007
Identities = 19/53 (35%), Positives = 28/53 (51%), Gaps = 6/53 (11%)
Query: 6 WTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKY 58
W+ L D+L LI + +++ RSVCS+W S P D+ FPL +Y
Sbjct: 402 WSLLLNDLLKLIVGHFETSFEIVNLRSVCSSWRSVVPPLDN------FPLFRY 448
Score = 37.4 bits (85), Expect = 0.012
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 205 VLFHDQDKRWTPVSNLST--ANGDICLFKGRFYVLDQSGQTVTVGPDSSTELAAHPLYQR 262
V++ ++ WT V A D+ FKG+FY LD SG+ + S E+ P +
Sbjct: 203 VMYRSRNMSWTQVVEHPEKYAYQDLVAFKGKFYALDSSGRGRVFVVELSLEVMEIPSVRG 262
Query: 263 CVRGKNRKLLVESEGELLLLDIHQTFFQFSMKIFKLDENRKKWEKLKKLGD 313
+ L++ E ELLL+ +F+ ++ DE W ++ +L +
Sbjct: 263 SQQSSKENLVLSGE-ELLLVQ------RFTPEVRHYDEYLYTWFRVFRLDE 306
>At5g14160 putative protein
Length = 352
Score = 42.7 bits (99), Expect = 3e-04
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKYVPAPD 63
VDW+ELP D++ L+ +RL + D R R+VCSTW + D P Q P L P P
Sbjct: 15 VDWSELPEDVIRLVLRRLRLS-DFHRARAVCSTW--CRVWGDCVSKPNQVPWLILFPDPA 71
Query: 64 SINNN 68
I +
Sbjct: 72 QIRRS 76
>At4g22030 putative protein
Length = 626
Score = 42.4 bits (98), Expect = 4e-04
Identities = 23/66 (34%), Positives = 36/66 (53%), Gaps = 2/66 (3%)
Query: 267 KNRKLLVESEGELLLLD--IHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSF 324
KN L+V GE L +D I +S I+++D + KWEKL LGD + + G +
Sbjct: 500 KNTHLVVTMTGETLRVDSIIRSDSDVWSFCIYQMDSSNSKWEKLTSLGDEAILLDQGITV 559
Query: 325 SASALD 330
A+A++
Sbjct: 560 LANAIE 565
Score = 30.4 bits (67), Expect = 1.5
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 6 WTELPRDILFLISQRLDVELDLIRFRSVCSTW 37
W++LP D+L ++ +RL D R +SVC +W
Sbjct: 410 WSKLPSDLLNMVFERLGF-ADFQRAKSVCPSW 440
>At4g22180 putative protein
Length = 558
Score = 41.6 bits (96), Expect = 6e-04
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 6 WTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKYVPAPDSI 65
W+ELP D+L + +RL + R +SVCS+WHS +P Q P L P D
Sbjct: 27 WSELPLDLLTAVFERLSYA-NFQRAKSVCSSWHS----GSRQSVPIQIPWLILFPEYD-- 79
Query: 66 NNNN 69
NNN+
Sbjct: 80 NNNS 83
>At2g05970 hypothetical protein
Length = 377
Score = 39.7 bits (91), Expect = 0.002
Identities = 26/67 (38%), Positives = 35/67 (51%), Gaps = 9/67 (13%)
Query: 6 WTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSP---IPNDHNILPFQFPLLKYVPAP 62
W+EL D+L + + L DL R RSVCS+WHS+ +P + Q P L P
Sbjct: 10 WSELCPDVLRCVFELLSFS-DLNRTRSVCSSWHSASRHCVPTQN-----QIPWLILFPRN 63
Query: 63 DSINNNN 69
+ NNNN
Sbjct: 64 NVNNNNN 70
Score = 33.5 bits (75), Expect = 0.17
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 248 PDSSTELAAHPLYQRCVRGKNRKLLVESEGELL-LLDIHQTFFQFSMKIFKLDENRKKWE 306
PD T+ LY + + + + GELL + + Q ++ +I+K++ +++WE
Sbjct: 237 PDRRTD---EELYVKEYIDTRLNIALTTSGELLKVASVVQKSKRWLFRIYKMNYIKRRWE 293
Query: 307 KLKKLGDRILFVGSGCSFSA 326
+++ LGD L + G + A
Sbjct: 294 RIESLGDEALILDMGITIVA 313
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.322 0.138 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,282,219
Number of Sequences: 26719
Number of extensions: 372472
Number of successful extensions: 984
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 889
Number of HSP's gapped (non-prelim): 102
length of query: 342
length of database: 11,318,596
effective HSP length: 100
effective length of query: 242
effective length of database: 8,646,696
effective search space: 2092500432
effective search space used: 2092500432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC122162.15