Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121245.10 - phase: 0 
         (300 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g64260 phi-1-like protein                                          437  e-123
At5g09440 unknown protein                                             358  3e-99
At4g08950 putative phi-1-like phosphate-induced protein               354  3e-98
At1g35140 phosphate-induced (phi-1) protein, putative                 338  2e-93
At5g51550 unknown protein                                             190  7e-49
At2g35145 unknown protein                                             171  3e-43
At2g17230 unknown protein                                             164  7e-41
At3g02970 phi-1-like protein                                          163  9e-41
At2g29720 Hydroxylase/Oxygenase (CTF2B)                                32  0.32
At3g02170 unknown protein                                              32  0.42
At3g22310 putative RNA helicase                                        30  1.6
At4g03030 OR23peptide                                                  29  2.7
At2g27880 Argonaute (AGO1)-like protein                                29  2.7
At3g24300 ammonium transporter                                         28  6.0

>At5g64260 phi-1-like protein
          Length = 305

 Score =  437 bits (1123), Expect = e-123
 Identities = 221/309 (71%), Positives = 246/309 (79%), Gaps = 13/309 (4%)

Query: 1   MASNYYFAIVLSAVLLLVLPTLSFGELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTFTPI 60
           MASNY FAI L+  L       S   LV+EQPLV+KYHNG LLKG +TVNL+WYG FTPI
Sbjct: 1   MASNYRFAIFLT--LFFATAGFSAAALVEEQPLVMKYHNGVLLKGNITVNLVWYGKFTPI 58

Query: 61  QRSIIVDFINSLST----TGAALPSASAWWKTTEKYKVGSSALTVGKQFLHPAYTLGKNL 116
           QRS+IVDFI+SL++    + AA+PS ++WWKTTEKYK GSS L VGKQ L   Y LGK+L
Sbjct: 59  QRSVIVDFIHSLNSKDVASSAAVPSVASWWKTTEKYKGGSSTLVVGKQLLLENYPLGKSL 118

Query: 117 KGKDLLALATKFNE-LSSITVVLTAKDVNVEGFCMSRCGTHGSV----RRGSGGARTPYI 171
           K   L AL+TK N  L SITVVLTAKDV VE FCMSRCGTHGS     RR + GA   Y+
Sbjct: 119 KNPYLRALSTKLNGGLRSITVVLTAKDVTVERFCMSRCGTHGSSGSNPRRAANGAA--YV 176

Query: 172 WVGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNG 231
           WVGN+ET CPG CAWPFHQPIYGPQTPPLVAPNGDVGVDGM+INLATLLA TVTNPFNNG
Sbjct: 177 WVGNSETQCPGYCAWPFHQPIYGPQTPPLVAPNGDVGVDGMIINLATLLANTVTNPFNNG 236

Query: 232 YFQGPAAAPLEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDP 291
           Y+QGP  APLEAV+AC G+FGSG+YPGYAGRVLVD  +GSSYNA G  GRKYLLPAMWDP
Sbjct: 237 YYQGPPTAPLEAVSACPGIFGSGSYPGYAGRVLVDKTTGSSYNARGLAGRKYLLPAMWDP 296

Query: 292 QTSACKTLV 300
           Q+S CKTLV
Sbjct: 297 QSSTCKTLV 305


>At5g09440 unknown protein
          Length = 278

 Score =  358 bits (918), Expect = 3e-99
 Identities = 190/303 (62%), Positives = 219/303 (71%), Gaps = 28/303 (9%)

Query: 1   MASNYYFAIVLSAVLLLVLPTLSFGELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTFTPI 60
           MA NY FAI+L    +L+  T+ F     + P+       + L G +T+NLIWYG FTPI
Sbjct: 1   MAYNYRFAILL----VLLSATVGFTAAALKPPV-------RTLNGNITLNLIWYGKFTPI 49

Query: 61  QRSIIVDFINSLSTTGAAL-PSASAWWKTTEKYKVGSSALTVGKQFLHPAYTLGKNLKGK 119
           QRSIIVDFI S+S+  AA  PS ++WWKTTEKYK G S L VGKQ L   Y LGK+LK  
Sbjct: 50  QRSIIVDFIRSISSVTAAKGPSVASWWKTTEKYKTGVSTLVVGKQLLLENYPLGKSLKSP 109

Query: 120 DLLALATKFNE--LSSITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAE 177
            L AL++K N     SITVVLTAKDV VEG CM+RCGTHGS  + S      Y+WVGN+E
Sbjct: 110 YLRALSSKLNAGGARSITVVLTAKDVTVEGLCMNRCGTHGS--KSSSVNSGAYVWVGNSE 167

Query: 178 TLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGPA 237
           T CPG CAWPFHQPIYGPQ+PPLVAPNGDVGVDGM+IN+ATLL  TVTNP          
Sbjct: 168 TQCPGYCAWPFHQPIYGPQSPPLVAPNGDVGVDGMIINIATLLVNTVTNP---------- 217

Query: 238 AAPLEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSACK 297
            +P EAV+ACTG+FGSGAYPGYAGRVLVD  SG+SYNA G  GRKYLLPA+WDPQTS CK
Sbjct: 218 -SP-EAVSACTGIFGSGAYPGYAGRVLVDKTSGASYNALGLAGRKYLLPALWDPQTSTCK 275

Query: 298 TLV 300
           T+V
Sbjct: 276 TMV 278


>At4g08950 putative phi-1-like phosphate-induced protein
          Length = 314

 Score =  354 bits (909), Expect = 3e-98
 Identities = 178/313 (56%), Positives = 220/313 (69%), Gaps = 17/313 (5%)

Query: 5   YYFAIVLSAVLLLVLPTLSFGELVQEQP---LVLKYHNGQLLKGKLTVNLIWYGTFTPIQ 61
           Y     L   L L+  ++S   L  ++P    +LKYH G LL GK++VNLIWYG F P Q
Sbjct: 2   YLLVFKLFLFLSLLQISVSARNLASQEPNQFQLLKYHKGALLSGKISVNLIWYGKFKPSQ 61

Query: 62  RSIIVDFINSLSTTGAAL-----PSASAWWKTTEKY--------KVGSSALTVGKQFLHP 108
           R+II DFI SL+ T         PS + WWKTTEKY             +LT+GKQ +  
Sbjct: 62  RAIISDFITSLTHTSPTSKTLHQPSVATWWKTTEKYYKLATPSKNSSPLSLTLGKQIIDE 121

Query: 109 AYTLGKNLKGKDLLALATKFNELSSITVVLTAKDVNVEGFCMSRCGTHGSVRR-GSGGAR 167
           + +LGK+L  K +  LA+K ++ ++I VVLT+ DV V GF MSRCGTHG  R  G  G++
Sbjct: 122 SCSLGKSLTDKKIQTLASKGDQRNAINVVLTSADVTVTGFGMSRCGTHGHARGLGKRGSK 181

Query: 168 TPYIWVGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNP 227
             YIWVGN+ET CPGQCAWPFH P+YGPQ+PPLVAPN DVG+DGMVINLA+LLAGT TNP
Sbjct: 182 FAYIWVGNSETQCPGQCAWPFHAPVYGPQSPPLVAPNNDVGLDGMVINLASLLAGTATNP 241

Query: 228 FNNGYFQGPAAAPLEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPA 287
           F NGY+QGP  APLEA +AC GV+G GAYPGYAG +LVD  +G S+NA+GANGRK+LLPA
Sbjct: 242 FGNGYYQGPQNAPLEAASACPGVYGKGAYPGYAGDLLVDTTTGGSFNAYGANGRKFLLPA 301

Query: 288 MWDPQTSACKTLV 300
           ++DP TSAC T+V
Sbjct: 302 LYDPTTSACSTMV 314


>At1g35140 phosphate-induced (phi-1) protein, putative
          Length = 309

 Score =  338 bits (867), Expect = 2e-93
 Identities = 161/277 (58%), Positives = 204/277 (73%), Gaps = 14/277 (5%)

Query: 36  KYHNGQLLKGKLTVNLIWYGTFTPIQRSIIVDFINSLST----TGAALPSASAWWKTTEK 91
           +YH G LL G +++NLIWYG F P QR+I+ DF+ SLS+    T A  PS + WWKT EK
Sbjct: 33  QYHKGALLTGDVSINLIWYGKFKPSQRAIVTDFVASLSSSRRSTMAQNPSVATWWKTVEK 92

Query: 92  Y-------KVGSSALTVGKQFLHPAYTLGKNLKGKDLLALATKFNELSSITVVLTAKDVN 144
           Y            +L++G+Q L   Y++GK+L  K+L  LA K  +  ++ VVLT+ DV 
Sbjct: 93  YYQFRKMTTTRGLSLSLGEQILDQGYSMGKSLTEKNLKDLAAKGGQSYAVNVVLTSADVT 152

Query: 145 VEGFCMSRCGTHGSVRRGSG--GARTPYIWVGNAETLCPGQCAWPFHQPIYGPQTPPLVA 202
           V+GFCM+RCG+HG+   GSG  G+R  YIWVGN+ET CPGQCAWPFH P+YGPQ+PPLVA
Sbjct: 153 VQGFCMNRCGSHGT-GSGSGKKGSRFAYIWVGNSETQCPGQCAWPFHAPVYGPQSPPLVA 211

Query: 203 PNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGPAAAPLEAVTACTGVFGSGAYPGYAGR 262
           PN DVG+DGMVINLA+L+A T TNPF +GY+QGP  APLEA +ACTGV+G G+YPGYAG 
Sbjct: 212 PNNDVGLDGMVINLASLMAATATNPFGDGYYQGPKTAPLEAGSACTGVYGKGSYPGYAGE 271

Query: 263 VLVDGASGSSYNAHGANGRKYLLPAMWDPQTSACKTL 299
           +LVD  +G SYN  G NGRKYLLPA++DP+T +C TL
Sbjct: 272 LLVDATTGGSYNVKGLNGRKYLLPALFDPKTDSCSTL 308


>At5g51550 unknown protein
          Length = 337

 Score =  190 bits (483), Expect = 7e-49
 Identities = 107/278 (38%), Positives = 154/278 (54%), Gaps = 18/278 (6%)

Query: 35  LKYHNGQLLKGKLTVNLIWYGTFTPIQRSIIVDFINSLSTTGAALPSASAWWKTTEKY-- 92
           L+YH G +L   +TV+ IWYGT+   Q+ II +FINS+S  G+  PS S WWKT + Y  
Sbjct: 55  LRYHMGPVLTNNITVHPIWYGTWQKSQKKIIREFINSISAVGSKHPSVSGWWKTVQLYTD 114

Query: 93  KVGSS---ALTVGKQFLHPAYTLGKNLKGKDLLALATK----------FNELSSITVVLT 139
           + GS+    + +G++     Y+ GK+L    + ++              N  S + ++LT
Sbjct: 115 QTGSNITGTVRLGEEKNDRFYSHGKSLTRLSIQSVIKSAVTSRSRPLPVNPKSGLYLLLT 174

Query: 140 AKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPIYGPQTPP 199
           A DV V+ FC   CG H        G   PY WVGN+  LCPG CA+PF  P + P   P
Sbjct: 175 ADDVYVQDFCGQVCGFHYFTFPSIVGFTLPYAWVGNSAKLCPGVCAYPFAVPAFIPGLKP 234

Query: 200 LVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGP-AAAPLEAVTACTGVFGSGAYPG 258
           + +PNGDVGVDGM+  +A  +A   TNP  N ++ GP   AP+E    C G++G+G    
Sbjct: 235 VKSPNGDVGVDGMISVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGS 294

Query: 259 YAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSAC 296
           Y G++L D  SG++YN +G   R+YL+  +W    S C
Sbjct: 295 YTGQMLND-HSGATYNVNGIR-RRYLIQWLWSHVVSYC 330


>At2g35145 unknown protein
          Length = 323

 Score =  171 bits (434), Expect = 3e-43
 Identities = 107/282 (37%), Positives = 149/282 (51%), Gaps = 21/282 (7%)

Query: 35  LKYHNGQLLKGKLT-VNLIWYGTFTPIQRSIIVDFINSLSTTGAA-LPSASAWWKTTEKY 92
           L+YH G ++   +T + +IWYG + P  +SII DF+ S+S    A  PS S WWKT   Y
Sbjct: 36  LQYHLGPVISSPVTSLYIIWYGRWNPTHQSIIRDFLYSVSAPAPAQYPSVSNWWKTVRLY 95

Query: 93  K--VGSS---ALTVGKQFLHPAYTLGKNLKGKDL-----LALATKF--NELSSITVVLTA 140
           +   GS+    L +  +F    Y+ G +L    +      AL +K   N ++ + +VLT+
Sbjct: 96  RDQTGSNITDTLVLSGEFHDSTYSHGSHLTRFSVQSVIRTALTSKLPLNAVNGLYLVLTS 155

Query: 141 KDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPIYGPQT--- 197
            DV ++ FC + CG H        GA  PY WVGN+E  CP  CA+PF QP   P +   
Sbjct: 156 DDVEMQEFCRAICGFHYFTFPSVVGATVPYAWVGNSERQCPEMCAYPFAQPKPFPGSGFV 215

Query: 198 --PPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQG-PAAAPLEAVTACTGVFGSG 254
               +  PNG+VG+DGM+  +A  LA   +NP  NG++ G  A AP E    C GV+GSG
Sbjct: 216 AREKMKPPNGEVGIDGMISVIAHELAEVSSNPMLNGWYGGEDATAPTEIADLCLGVYGSG 275

Query: 255 AYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSAC 296
              GY G V  D    + YN  G  GRKYL+  +WD   + C
Sbjct: 276 GGGGYMGSVYKD-RWRNVYNVKGVKGRKYLIQWVWDLNRNRC 316


>At2g17230 unknown protein
          Length = 363

 Score =  164 bits (414), Expect = 7e-41
 Identities = 99/280 (35%), Positives = 147/280 (52%), Gaps = 20/280 (7%)

Query: 35  LKYHNGQLLKGK-LTVNLIWYGTFTPIQRSIIVDFINSLSTTGAALPSASAWWKTTEKY- 92
           L+YH G +L    + + +IWYG ++   +S+I DF+NS+S   A  PS S WW+T   Y 
Sbjct: 79  LRYHMGPVLSSSPINIYVIWYGQWSRPHKSLIRDFLNSISDAKAPSPSVSEWWRTASLYT 138

Query: 93  -----KVGSSALTVGKQFLHPAYTLGKNLKG---KDLLALATK-----FNELSSITVVLT 139
                 V  S L  G ++    Y+ G++L     ++++A A +      +  + + +VLT
Sbjct: 139 DQTGSNVSRSVLIAG-EYSDSKYSHGQHLTRLTIQEVIASAARSASFPVDHKNGMYLVLT 197

Query: 140 AKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPIYGPQTPP 199
           + DV ++ FC + CG H        G   PY WVG +   CP  CA+PF  P Y     P
Sbjct: 198 SHDVTMQDFCRAVCGFHYFTFPSMVGYTMPYAWVGQSGKQCPEVCAYPFALPGYMGHGGP 257

Query: 200 --LVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQG-PAAAPLEAVTACTGVFGSGAY 256
             L  PNG+ GVDGMV  +   LA  V+NP  N ++ G    AP E    C G++GSG  
Sbjct: 258 GELRPPNGETGVDGMVSVIGHELAEVVSNPLINAWYAGEDPTAPTEIGDLCEGLYGSGGG 317

Query: 257 PGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSAC 296
            GY G+V+ D   G ++N +G  GRK+L+  +W+P   AC
Sbjct: 318 GGYIGQVMRD-REGKTFNMNGKGGRKFLVQWIWNPNLKAC 356


>At3g02970 phi-1-like protein
          Length = 332

 Score =  163 bits (413), Expect = 9e-41
 Identities = 110/338 (32%), Positives = 158/338 (46%), Gaps = 50/338 (14%)

Query: 1   MASNYYFAIVLSAVLLLVLPTLSFGELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTFTPI 60
           MAS    +  +S ++ L+L  L    L +E P        Q+  G L ++L+WYG FTP 
Sbjct: 3   MASASSSSSSISVIIFLLLAPLC---LSREPP-------SQIPNGTLDLSLLWYGQFTPT 52

Query: 61  QRSIIVDFINSLSTTG--AALPSASAWWKTTEKYKVGSSALTVGKQ-------------- 104
           Q+  + DFI SL+        P  SAWWK  E Y+       + +Q              
Sbjct: 53  QKERVHDFIESLNFDAKEGLDPKVSAWWKVVESYQERFEVKDIYRQKKSNRTVAPRIKVK 112

Query: 105 ----FLHPAYTLGKNLK-GKDLLALATKFNELSSIT-VVLTAKDVNVEG--FCMSRCGTH 156
               ++      GK L  G     + T    +S +  VVL +  V   G  FC   C  +
Sbjct: 113 VVRSYVDEKMKYGKELTMGNGEKLVETAIGNMSKVVPVVLLSAQVRAHGVGFCDGTCQHN 172

Query: 157 GSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINL 216
              +         YI V N E  CPG+CAWPFH    GP+       +G+VG D +VI L
Sbjct: 173 ALAKIKGQKEPRRYIMVSNPEVECPGECAWPFHTADKGPRGMTYQPASGEVGADALVIQL 232

Query: 217 ATLLAGTVTNP-------------FNNGYFQGPAAAPLEAV---TACTGVFGSGAYPGYA 260
           AT LA   TNP             +N+   +   ++ +  V   T CT VFGSGA+PG+ 
Sbjct: 233 ATGLADLATNPDLTKSLFKSETTPYNDDVKKNHESSSMYIVDPATKCTRVFGSGAFPGFT 292

Query: 261 GRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSACKT 298
           GR+ VD  +G ++N+HG N  K+L+P++WDP+T +C T
Sbjct: 293 GRIRVDPITGGAFNSHGINHLKFLIPSIWDPKTKSCWT 330


>At2g29720 Hydroxylase/Oxygenase (CTF2B)
          Length = 427

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 62  RSIIVDFINSLSTTGAALPSASAWWKTTEKYKVGSSALTVGKQFLHPAYTLGKNLKGKDL 121
           RS++++   SL T GA+L  +   W+  +   +G     + KQFL     + K   G++L
Sbjct: 67  RSVVLEQAESLRTGGASLTLSKNGWRVLDAISIGPQ---LRKQFLEMQGVVLKKEDGREL 123

Query: 122 LALATKFNELS 132
            +   K N+ S
Sbjct: 124 RSFKFKDNDQS 134


>At3g02170 unknown protein
          Length = 905

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 26/68 (38%), Positives = 32/68 (46%), Gaps = 4/68 (5%)

Query: 58  TPIQRSIIVDFINSLSTTGAA-LPSASAWWKTTEKYKVGSSALTVGKQFLHPAYTLGKNL 116
           T +QRS  VD I  +  + A+  P   A WK   + K G SALTV  +       L    
Sbjct: 307 TALQRSRSVDSIKRIPASAASKFPMEPAPWK---QMKAGDSALTVYGEIQKRLTQLEFKK 363

Query: 117 KGKDLLAL 124
            GKDL AL
Sbjct: 364 SGKDLRAL 371


>At3g22310 putative RNA helicase
          Length = 610

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 248 TGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKY 283
           +G  G G+Y GY G     G  G SY   G +  +Y
Sbjct: 527 SGRSGGGSYGGYGGSSGRSGGGGGSYGGSGGSSSRY 562


>At4g03030 OR23peptide
          Length = 434

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/42 (38%), Positives = 21/42 (49%), Gaps = 1/42 (2%)

Query: 249 GVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWD 290
           G F   A PG  GR++V G  GS +   GA G +     M+D
Sbjct: 183 GSFACAAMPGSCGRIIVAG-GGSRHTLFGAAGSRMSSVEMYD 223


>At2g27880 Argonaute (AGO1)-like protein
          Length = 997

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/52 (34%), Positives = 21/52 (39%), Gaps = 4/52 (7%)

Query: 154 GTHGSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNG 205
           G HG   RG GG R         +    GQ AWP  Q  YG +   + A  G
Sbjct: 7   GGHGGASRGRGGGRRS----DQRQDQSSGQVAWPGLQQSYGGRGGSVSAGRG 54


>At3g24300 ammonium transporter
          Length = 498

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 24/82 (29%), Positives = 33/82 (39%), Gaps = 8/82 (9%)

Query: 208 GVDGMVINLATLLAGTVTNPFNNGYFQGPAAAPLEAVTACTGVFGS--------GAYPGY 259
           GV  MV  +A L    +  P    + +G  A  L   +A   V G+        G  PG 
Sbjct: 207 GVVHMVGGIAGLWGALIEGPRRGRFEKGGRAIALRGHSASLVVLGTFLLWFGWYGFNPGS 266

Query: 260 AGRVLVDGASGSSYNAHGANGR 281
             ++LV   SGS+Y      GR
Sbjct: 267 FTKILVPYNSGSNYGQWSGIGR 288


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.319    0.136    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,901,376
Number of Sequences: 26719
Number of extensions: 292311
Number of successful extensions: 642
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 604
Number of HSP's gapped (non-prelim): 14
length of query: 300
length of database: 11,318,596
effective HSP length: 99
effective length of query: 201
effective length of database: 8,673,415
effective search space: 1743356415
effective search space used: 1743356415
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)


Medicago: description of AC121245.10