BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121241.7 + phase: 0 /pseudo
         (69 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g14860 unknown protein                                              38  0.001
At5g55530 unknown protein                                              35  0.009
At4g27560 UDP rhamnose-anthocyanidin-3-glucoside rhamnosyltransf...    30  0.29
At4g27570 UDP rhamnose--anthocyanidin-3-glucoside rhamnosyltrans...    28  0.84
At4g26630 unknown protein                                              27  1.4
At5g55660 putative protein                                             27  1.9
At5g18420 unknown protein                                              25  5.4
At1g47910 reverse transcriptase, putative                              25  5.4
At1g02230 hypothetical protein                                         25  5.4
At5g15580 putative protein                                             25  9.3
At1g50570 unknown protein                                              25  9.3

>At3g14860 unknown protein
          Length = 493

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 26  TKEETGWPSFRQVV-DLLKLSLEEFTSSIL--KFMSKPH 61
           TKEE GWPSF Q++ DL KL+LE  TS ++  +F + P+
Sbjct: 308 TKEEPGWPSFGQLLTDLCKLALEFITSHLVPARFQTNPN 346


>At5g55530 unknown protein
          Length = 405

 Score = 34.7 bits (78), Expect = 0.009
 Identities = 23/72 (31%), Positives = 37/72 (50%), Gaps = 6/72 (8%)

Query: 4   QPSERDFKGEASSDKSKSTLERTKEETGWPSFRQ-VVDLLKLSLEEFTSSILKF-----M 57
           Q SE +  GE S +K+  ++   K E      +Q +VD+   S+++FT S+ K      +
Sbjct: 311 QESESEASGETSEEKTVKSVLTVKVEPESKVVQQDIVDMYMKSMQQFTDSLAKMKLPLDI 370

Query: 58  SKPHTTERSSSD 69
             P  +E SSSD
Sbjct: 371 DSPTKSENSSSD 382


>At4g27560 UDP rhamnose-anthocyanidin-3-glucoside
           rhamnosyltransferase - like protein
          Length = 455

 Score = 29.6 bits (65), Expect = 0.29
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 16  SDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSKPHTTERSS 67
           SD+ K ++E  +EETGW S   + D +  S+ +  S I   + K HT  R +
Sbjct: 375 SDELKVSVEVAREETGWFSKESLFDAIN-SVMKRDSEIGNLVKKNHTKWRET 425


>At4g27570 UDP rhamnose--anthocyanidin-3-glucoside
           rhamnosyltransferase - like protein
          Length = 453

 Score = 28.1 bits (61), Expect = 0.84
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 16  SDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSKPHTTERSS 67
           SD+ K ++E  +EETGW S   + D +  S+ +  S +   + K HT  R +
Sbjct: 375 SDELKVSVEVAREETGWFSKESLCDAVN-SVMKRDSELGNLVRKNHTKWRET 425


>At4g26630 unknown protein
          Length = 763

 Score = 27.3 bits (59), Expect = 1.4
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 5/59 (8%)

Query: 15  SSDKSKSTLERTKEETGWPSFRQVVDL----LKLSLEEFTSSILKFMSKPHTTERSSSD 69
           + +K K  LE+  +E  W  F  V+D+         E+  + + +F+ KPH T   + D
Sbjct: 407 AKEKVKEKLEKCTKEKLW-EFCDVLDIHITKATTKKEDIITKLFEFLEKPHVTGDVTGD 464


>At5g55660 putative protein
          Length = 759

 Score = 26.9 bits (58), Expect = 1.9
 Identities = 13/61 (21%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 10  FKGEASSDKSKSTLERTKEETGWPSFRQVVDLLKLSL-------EEFTSSILKFMSKPHT 62
           +K +   +K+K  ++   E+       +  DL  +S+       E+  + +++F+ KPH 
Sbjct: 392 YKWQGDEEKAKLKVKEKFEKINKEKLLEFCDLFDISVAKATTKKEDIVTKLVEFLEKPHA 451

Query: 63  T 63
           T
Sbjct: 452 T 452


>At5g18420 unknown protein
          Length = 441

 Score = 25.4 bits (54), Expect = 5.4
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 3   QQPSERDFKGEASSDKSKSTLERTKEE-----TGWPSFRQVVDLLKLSLEEFTSS 52
           Q+PS   F  E  S      LE+++         W S+  V ++LKLS  ++  S
Sbjct: 80  QKPSFNPFLSEMISAACNEQLEKSERAFLLHLLQWNSYNNVKEILKLSAVDYIRS 134


>At1g47910 reverse transcriptase, putative
          Length = 1142

 Score = 25.4 bits (54), Expect = 5.4
 Identities = 11/30 (36%), Positives = 18/30 (59%)

Query: 30   TGWPSFRQVVDLLKLSLEEFTSSILKFMSK 59
            T WP+F   ++ L+   EEFT+  L  +S+
Sbjct: 1081 TEWPAFSVYLEELQSDREEFTNFSLSLISR 1110


>At1g02230 hypothetical protein
          Length = 192

 Score = 25.4 bits (54), Expect = 5.4
 Identities = 11/30 (36%), Positives = 18/30 (59%)

Query: 30  TGWPSFRQVVDLLKLSLEEFTSSILKFMSK 59
           T WP+F   ++ L+   EEFT+  L  +S+
Sbjct: 131 TEWPAFSVYLEELQSDREEFTNFSLSLISR 160


>At5g15580 putative protein
          Length = 927

 Score = 24.6 bits (52), Expect = 9.3
 Identities = 15/58 (25%), Positives = 28/58 (47%)

Query: 12  GEASSDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSKPHTTERSSSD 69
           G+AS +   + +   K+ET     ++     +  +   +SS L F S P ++  SS+D
Sbjct: 51  GKASDNVGDTNISADKKETEKSKKKKTAKEKQRGVSSESSSRLSFSSSPCSSSFSSAD 108


>At1g50570 unknown protein
          Length = 388

 Score = 24.6 bits (52), Expect = 9.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 36  RQVVDLLKLSLEEFTSSILKF-----MSKPHTTERSSS 68
           + +VD+   SL++FT S+ K      +  P  +E SSS
Sbjct: 331 QDIVDMYTKSLQQFTESLAKMKLPLDIDSPTQSENSSS 368


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.306    0.122    0.322 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,365,686
Number of Sequences: 26719
Number of extensions: 41660
Number of successful extensions: 119
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 112
Number of HSP's gapped (non-prelim): 12
length of query: 69
length of database: 11,318,596
effective HSP length: 45
effective length of query: 24
effective length of database: 10,116,241
effective search space: 242789784
effective search space used: 242789784
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 52 (24.6 bits)