BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121240.11 + phase: 0 /pseudo
(153 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04810 membrane-associated salt-inducible protein-like 32 0.13
At4g33970 extensin-like protein 31 0.23
At2g15880 unknown protein 31 0.30
At4g13340 extensin-like protein 30 0.67
At3g15510 jasmonic acid regulatory protein like 30 0.67
At3g19020 hypothetical protein 29 0.87
At1g49490 hypothetical protein 29 1.1
At5g44500 unknown protein 28 1.9
At3g22800 hypothetical protein 28 1.9
At1g52880 NAM-like protein 28 1.9
At4g11430 putative proline-rich protein 28 2.5
At4g14690 light induced protein like 27 3.3
At1g72790 unknown protein 27 4.3
At1g61080 hypothetical protein 27 4.3
At1g35510 putative growth regulator protein (At1g35510) 27 4.3
At1g31810 hypothetical protein 27 4.3
At4g32710 putative protein kinase 27 5.7
At3g04160 hypothetical protein 27 5.7
At5g07750 putative protein 26 7.4
At3g47210 unknown protein 26 7.4
>At5g04810 membrane-associated salt-inducible protein-like
Length = 952
Score = 32.0 bits (71), Expect = 0.13
Identities = 19/60 (31%), Positives = 30/60 (49%), Gaps = 2/60 (3%)
Query: 65 PFVPHEISVLVKLI-LGHLRYLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPI 123
P P+ ++L + + + + L PPQP PP++ RP K +GS S+P PI
Sbjct: 13 PHFPYSATILRRHSPVASISFSLKQPPPQPPEPPESPPDLRRPEK-SIGSSSSSSSPSPI 71
>At4g33970 extensin-like protein
Length = 699
Score = 31.2 bits (69), Expect = 0.23
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRP 143
PP +SPP V P P V S PPP+H P P P +F P
Sbjct: 583 PPPVHSPPPPVHSPPPPAPV-------HSPPPPVHSPPPPPPVYSPPPPVFSPP 629
Score = 28.9 bits (63), Expect = 1.1
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 10/54 (18%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRP 143
PP +SPP VF P P S PPP+H P P P H P
Sbjct: 562 PPPVHSPPPPVFSPPPPVY---------SPPPPVHS-PPPPVHSPPPPAPVHSP 605
Score = 26.6 bits (57), Expect = 5.7
Identities = 15/54 (27%), Positives = 21/54 (38%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRP 143
P Q PP +PD P +K+R P P++ + P P H P
Sbjct: 490 PVQKPQPPKESPQPDDPYDQSPVTKRRSPPPAPVNSPPPPVYSPPPPPPPVHSP 543
>At2g15880 unknown protein
Length = 727
Score = 30.8 bits (68), Expect = 0.30
Identities = 20/64 (31%), Positives = 25/64 (38%), Gaps = 6/64 (9%)
Query: 90 PPQPNSPPDNVFRP------DRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRP 143
PP +SPP V+ P P V S PPP++ P P P +F P
Sbjct: 574 PPPVHSPPPPVYSPPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPPVHSPPPPVFSPP 633
Query: 144 EAVH 147
VH
Sbjct: 634 PPVH 637
Score = 30.8 bits (68), Expect = 0.30
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 9/58 (15%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRPEAVH 147
PP +SPP V+ P P V S PPP+H P P ++ P V+
Sbjct: 603 PPPVHSPPPPVYSPPPPPPVHSPPPPVFSPPPPVHS---------PPPPVYSPPPPVY 651
Score = 28.9 bits (63), Expect = 1.1
Identities = 20/61 (32%), Positives = 23/61 (36%), Gaps = 5/61 (8%)
Query: 90 PPQP---NSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRPEAV 146
PP P PP V+ P P V S PPP+H P P P + P V
Sbjct: 520 PPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPPVHS--PPPPVHSPPPPVHSPPPPV 577
Query: 147 H 147
H
Sbjct: 578 H 578
Score = 25.8 bits (55), Expect = 9.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 124
PP +SPP V+ P P + PPP++
Sbjct: 633 PPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPPPVY 667
>At4g13340 extensin-like protein
Length = 760
Score = 29.6 bits (65), Expect = 0.67
Identities = 16/54 (29%), Positives = 19/54 (34%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRP 143
PP P PP V+ P P PPP++ P P P RP
Sbjct: 484 PPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRP 537
Score = 29.6 bits (65), Expect = 0.67
Identities = 18/54 (33%), Positives = 20/54 (36%), Gaps = 7/54 (12%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRP 143
PP P PP V+ P P S PPP T +C P P H P
Sbjct: 499 PPPPPPPPPPVYSPPPPPVY-------SSPPPPPSPAPTPVYCTRPPPPPPHSP 545
Score = 27.7 bits (60), Expect = 2.5
Identities = 14/41 (34%), Positives = 16/41 (38%)
Query: 84 YLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 124
Y PP P+SPP F P P S + PP H
Sbjct: 533 YCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPH 573
>At3g15510 jasmonic acid regulatory protein like
Length = 364
Score = 29.6 bits (65), Expect = 0.67
Identities = 16/35 (45%), Positives = 18/35 (50%), Gaps = 1/35 (2%)
Query: 90 PPQPNSPPDNVFRP-DRPTKVGLGSKKRGSAPPPI 123
PPQPN PP F P D V +K SAP P+
Sbjct: 12 PPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPV 46
>At3g19020 hypothetical protein
Length = 951
Score = 29.3 bits (64), Expect = 0.87
Identities = 20/58 (34%), Positives = 24/58 (40%), Gaps = 3/58 (5%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRPEAVH 147
PP +SPP VF P P + S PPP+H P P P + P VH
Sbjct: 645 PPPVHSPPPPVFSP--PPPMHSPPPPVYSPPPPVHSPPPPP-VHSPPPPVHSPPPPVH 699
Score = 28.9 bits (63), Expect = 1.1
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 91 PQPNSP----PDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRPEAV 146
P PN P P RP P+ +K PP+H P P P +F P +
Sbjct: 603 PVPNDPYDASPIKKRRPQPPSPSTEETKTTSPQSPPVHSPPPPPPVHSPPPPVFSPPPPM 662
Query: 147 H 147
H
Sbjct: 663 H 663
Score = 28.5 bits (62), Expect = 1.5
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 90 PPQPNSPPDNVFRPDRPTKV-GLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRPEAVH 147
PP + PP VF P P + S PPP+H P P P + P VH
Sbjct: 724 PPVQSPPPPPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPP-VHSPPPPVHSPPPPVH 781
Score = 25.8 bits (55), Expect = 9.7
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPT 138
PP +SPP V P P+ + S PPP+ P LP T
Sbjct: 784 PPPVHSPPPPVHSPPPPSPI-------YSPPPPVFSPPPKPVTPLPPAT 825
>At1g49490 hypothetical protein
Length = 847
Score = 28.9 bits (63), Expect = 1.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 124
PP SPP VF P P+ V S PPP++
Sbjct: 596 PPPVFSPPPPVFSPPPPSPVYSPPPPSHSPPPPVY 630
Score = 28.1 bits (61), Expect = 1.9
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRPEA 145
PP +SPP V+ P PT +PPP H P P PT P +
Sbjct: 619 PPPSHSPPPPVYSPPPPT----------FSPPPTHN-TNQPPMGAPTPTQAPTPSS 663
Score = 26.9 bits (58), Expect = 4.3
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 90 PPQPNSPPDNVFRPDRPTKV-----GLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRP 143
PP +SPP V+ P V + S S PPP+H P P P +F P
Sbjct: 553 PPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFS-PPPPVFSPP 610
>At5g44500 unknown protein
Length = 254
Score = 28.1 bits (61), Expect = 1.9
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 90 PPQPNSPPDNVFRPDRPTKV-GLGSKKRGSAPPPIHGIITDPFCRLPLP 137
PP P PP RP + G RG PPP HG+ P R +P
Sbjct: 181 PPYPGPPPPQYGGQQRPMMIPPPGGMMRG--PPPPHGMQGPPPSRPGMP 227
>At3g22800 hypothetical protein
Length = 470
Score = 28.1 bits (61), Expect = 1.9
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Query: 84 YLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFHRP 143
Y+ PP P SPP V+ P P V PPP + P P P ++ P
Sbjct: 408 YVYPSPPPPPPSPPPYVYPPPPPPYV--------YPPPPSPPYVYPPPPPSPQPYMYPSP 459
>At1g52880 NAM-like protein
Length = 320
Score = 28.1 bits (61), Expect = 1.9
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 90 PPQPNSPPDNVFRP-DRPTKVGLGSKKRGSAPPPIHGIITD 129
PPQPN PP F P D + +K S P P+ II D
Sbjct: 12 PPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPV-AIIAD 51
>At4g11430 putative proline-rich protein
Length = 219
Score = 27.7 bits (60), Expect = 2.5
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 122
PP P PP + P T G +R PPP
Sbjct: 123 PPPPPPPPPTITPPVTTTTAGHHHHRRSPPPPP 155
Score = 26.9 bits (58), Expect = 4.3
Identities = 14/43 (32%), Positives = 16/43 (36%)
Query: 80 GHLRYLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 122
GH + + PP P PP P T R S PPP
Sbjct: 112 GHHHHRRSPPPPPPPPPPPPTITPPVTTTTAGHHHHRRSPPPP 154
>At4g14690 light induced protein like
Length = 193
Score = 27.3 bits (59), Expect = 3.3
Identities = 17/37 (45%), Positives = 19/37 (50%), Gaps = 1/37 (2%)
Query: 90 PPQ-PNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHG 125
PPQ P SPP V +P TK G G AP I+G
Sbjct: 64 PPQMPQSPPPPVSKPKVSTKFGDLLAFSGPAPERING 100
>At1g72790 unknown protein
Length = 561
Score = 26.9 bits (58), Expect = 4.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 90 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 122
PP P PP F+ +K G K + PPP
Sbjct: 365 PPPPPPPPPPFFQGLFSSKKGKSKKNNSNPPPP 397
>At1g61080 hypothetical protein
Length = 907
Score = 26.9 bits (58), Expect = 4.3
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 87 TDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 122
T P P PP R P + +G+ G PPP
Sbjct: 558 TQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGGPPPP 593
>At1g35510 putative growth regulator protein (At1g35510)
Length = 568
Score = 26.9 bits (58), Expect = 4.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 5 ADIEGSKSNVAMNAWMPQ 22
AD+ GS NV M AW P+
Sbjct: 122 ADVNGSSHNVLMEAWKPR 139
>At1g31810 hypothetical protein
Length = 1201
Score = 26.9 bits (58), Expect = 4.3
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 80 GHLRYLLTDVPPQPNSPP-----DNVFRPDRPTKVGLGSKKRGSAPPP 122
G +R PP P PP N +P P + S + G+ PPP
Sbjct: 670 GSIRVGPPSTPPPPPPPPPKANISNAPKPPAPPPLPPSSTRLGAPPPP 717
>At4g32710 putative protein kinase
Length = 731
Score = 26.6 bits (57), Expect = 5.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 91 PQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLP 135
P ++PP N P P+ S + S PPPI+ +P P
Sbjct: 144 PSESTPPVNTASPPPPSPPRRRSGPKPSFPPPINSSPPNPSPNTP 188
>At3g04160 hypothetical protein
Length = 712
Score = 26.6 bits (57), Expect = 5.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 91 PQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPI 123
P PNS P+ FRP P + +PPPI
Sbjct: 22 PPPNSNPNFFFRPPPPPLQNPNNYSIVPSPPPI 54
>At5g07750 putative protein
Length = 1289
Score = 26.2 bits (56), Expect = 7.4
Identities = 13/41 (31%), Positives = 19/41 (45%), Gaps = 1/41 (2%)
Query: 86 LTDVPPQPNSPPDNVFRPDRPTKVGL-GSKKRGSAPPPIHG 125
++ +PP P PP + P P + G PPP+HG
Sbjct: 1006 VSSIPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPPMHG 1046
Score = 25.8 bits (55), Expect = 9.7
Identities = 18/54 (33%), Positives = 20/54 (36%), Gaps = 6/54 (11%)
Query: 90 PPQPNSPPDNVFR--PDRPTKVGLGSKKRGSAPPPIHGIITDPFCRLPLPTLFH 141
PP P PP + P P G GS PPP +G P P P H
Sbjct: 956 PPPPPPPPPSYGSPPPPPPPPPGYGSPPPPPPPPPSYGSPPPP----PPPPFSH 1005
>At3g47210 unknown protein
Length = 474
Score = 26.2 bits (56), Expect = 7.4
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 87 TDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 122
T++ P+SPP + + D+ K L S S+PPP
Sbjct: 5 TEIFSSPSSPPPSFYMVDKTGK--LSSPSLPSSPPP 38
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.321 0.141 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,965,615
Number of Sequences: 26719
Number of extensions: 184564
Number of successful extensions: 579
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 499
Number of HSP's gapped (non-prelim): 89
length of query: 153
length of database: 11,318,596
effective HSP length: 90
effective length of query: 63
effective length of database: 8,913,886
effective search space: 561574818
effective search space used: 561574818
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Medicago: description of AC121240.11