BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121233.12 - phase: 0
(107 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38660 thaumatin-like protein 167 1e-42
At4g24180 thaumatin-like protein 166 2e-42
At4g36000 thaumatin-like protein 155 3e-39
At1g20030 thaumatin-like protein, predicted GPI-anchored protein... 144 6e-36
At4g36010 thaumatin-like predicted GPI-anchored protein 143 1e-35
At2g17860 putative thaumatin-like pathogenesis-related protein 139 2e-34
At1g75800 thaumatin, putative 137 1e-33
At1g75030 thaumatin-like protein 134 6e-33
At5g24620 thaumatin-like protein 129 3e-31
At1g19320 pathogenesis-related protein 5 precursor, putative 128 4e-31
At1g75050 thaumatin-like protein 126 2e-30
At4g38670 thaumatin-like protein 125 3e-30
At1g73620 thaumatin like protein 124 6e-30
At1g18250 putative protein 123 2e-29
At1g75040 thaumatin-like protein 122 3e-29
At5g38280 receptor serine/threonine kinase PR5K 113 1e-26
At1g77700 thaumatin-like protein 113 1e-26
At2g24810 putative thaumatin-like pathogenesis-related protein 101 7e-23
At5g02140 thaumatin-like protein 97 1e-21
At5g40020 thaumatin-like protein 96 2e-21
>At4g38660 thaumatin-like protein
Length = 345
Score = 167 bits (422), Expect = 1e-42
Identities = 75/104 (72%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Query: 1 MVETSGGSGSCQATGCGEDLNRRCPSELRVDGGDACNSACGAFGTPEYCCSGAFGSPSSC 60
+VE +GGSG C +TGC DLN +CP+ELR GDAC SAC AF +PEYCCSGA+ +PSSC
Sbjct: 145 IVEVAGGSGQCASTGCTTDLNIQCPAELRFGDGDACKSACLAFRSPEYCCSGAYATPSSC 204
Query: 61 SPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSS 104
PSVYSEMFK+ACP+SYSYA+DDATSTFTC A DYT+TFCPSS
Sbjct: 205 RPSVYSEMFKAACPRSYSYAYDDATSTFTC-AGGDYTVTFCPSS 247
>At4g24180 thaumatin-like protein
Length = 255
Score = 166 bits (419), Expect = 2e-42
Identities = 76/104 (73%), Positives = 87/104 (83%), Gaps = 2/104 (1%)
Query: 1 MVETSGGS-GSCQATGCGEDLNRRCPSELRVDGGDACNSACGAFGTPEYCCSGAFGSPSS 59
+VE SGGS G+C TGC DLN++CP+ELR G AC SAC AFG+PEYCCSGA+ SP+
Sbjct: 150 LVEASGGSEGTCLTTGCVTDLNQKCPTELRFGSGSACKSACEAFGSPEYCCSGAYASPTE 209
Query: 60 CSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPS 103
C PS+YSE+FKSACP+SYSYAFDDATSTFTCT A DYTITFCPS
Sbjct: 210 CKPSMYSEIFKSACPRSYSYAFDDATSTFTCTDA-DYTITFCPS 252
>At4g36000 thaumatin-like protein
Length = 190
Score = 155 bits (392), Expect = 3e-39
Identities = 70/99 (70%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
Query: 7 GSGSCQATGCGEDLNRRCPSELRVDGGDACNSACGAFGTPEYCCSGAFGSPSSCSPSVYS 66
GSG C TGC DLN+ CP+EL+ AC SAC AFG PEYCCSGA+GSP SC PS+YS
Sbjct: 92 GSGLCPTTGCVTDLNQNCPTELKAKRSLACRSACEAFGRPEYCCSGAYGSPDSCKPSMYS 151
Query: 67 EMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSSS 105
++FKSACPKSYSYA+DDATSTFTC+ A DYTITFCP S
Sbjct: 152 QVFKSACPKSYSYAYDDATSTFTCSGA-DYTITFCPKLS 189
>At1g20030 thaumatin-like protein, predicted GPI-anchored protein
(by homology)
Length = 299
Score = 144 bits (364), Expect = 6e-36
Identities = 68/111 (61%), Positives = 80/111 (71%), Gaps = 8/111 (7%)
Query: 1 MVETSGGSG-SCQATGCGEDLNRRCPSELRVDGGD-------ACNSACGAFGTPEYCCSG 52
+V GGSG +C +TGC DLN CPSELRV+ D AC SAC AF PEYCCSG
Sbjct: 119 LVVPQGGSGQNCSSTGCVVDLNGSCPSELRVNSVDGKEAVAMACKSACEAFRQPEYCCSG 178
Query: 53 AFGSPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPS 103
AFGSP +C PS YS +FKSACP++YSYA+DD +STFTC + +Y ITFCPS
Sbjct: 179 AFGSPDTCKPSTYSRIFKSACPRAYSYAYDDKSSTFTCAKSPNYVITFCPS 229
>At4g36010 thaumatin-like predicted GPI-anchored protein
Length = 301
Score = 143 bits (361), Expect = 1e-35
Identities = 65/108 (60%), Positives = 80/108 (73%), Gaps = 5/108 (4%)
Query: 3 ETSGGSGSCQATGCGEDLNRRCPSELRVDG----GDACNSACGAFGTPEYCCSGAFGSPS 58
+ G +G+C TGC +LN CP++L+V G AC SAC AFGTPEYCCSGAFG+P
Sbjct: 148 DAGGVAGNCTTTGCVAELNGPCPAQLKVATTGAEGVACKSACEAFGTPEYCCSGAFGTPD 207
Query: 59 SCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSSSP 106
+C PS YS+ FK+ACP++YSYA+DD TSTFTC A DY ITFCPS +P
Sbjct: 208 TCKPSEYSQFFKNACPRAYSYAYDDGTSTFTCGGA-DYVITFCPSPNP 254
>At2g17860 putative thaumatin-like pathogenesis-related protein
Length = 253
Score = 139 bits (350), Expect = 2e-34
Identities = 64/105 (60%), Positives = 73/105 (68%), Gaps = 7/105 (6%)
Query: 7 GSGSCQATGCGEDLNRRCPSELRVD------GGDACNSACGAFGTPEYCCSGAFGSPSSC 60
G G C ATGC DLN CP +L+V G AC SAC AFGTPE+CC+GAFG+P +C
Sbjct: 149 GVGKCNATGCAADLNGLCPEQLKVTVEAAGTGAVACKSACEAFGTPEFCCNGAFGTPDTC 208
Query: 61 SPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSSS 105
PS YS FK CP +YSYA+DD TSTFTC+ A DY ITFCPS S
Sbjct: 209 QPSEYSVFFKKTCPTAYSYAYDDGTSTFTCSGA-DYVITFCPSPS 252
>At1g75800 thaumatin, putative
Length = 330
Score = 137 bits (344), Expect = 1e-33
Identities = 64/111 (57%), Positives = 78/111 (69%), Gaps = 8/111 (7%)
Query: 1 MVETSGGSG-SCQATGCGEDLNRRCPSELRVDGGDA-------CNSACGAFGTPEYCCSG 52
+V GGSG +C +TGC DLN CPSEL+V D C SAC AF TPEYCCSG
Sbjct: 139 LVAPQGGSGLNCSSTGCVVDLNGSCPSELKVTSLDGRGKQSMGCKSACEAFRTPEYCCSG 198
Query: 53 AFGSPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPS 103
A G+P +C PS YS MFK+ACP++YSYA+DD +STFTC + +Y ITFCP+
Sbjct: 199 AHGTPDTCKPSSYSLMFKTACPRAYSYAYDDQSSTFTCAESPNYVITFCPT 249
>At1g75030 thaumatin-like protein
Length = 246
Score = 134 bits (338), Expect = 6e-33
Identities = 60/109 (55%), Positives = 80/109 (73%), Gaps = 6/109 (5%)
Query: 2 VETSGGSGSCQATGCGEDLNRRCPSELRV---DGGD--ACNSACGAFGTPEYCCSGAFGS 56
++ GG G+C+ GC D+N CPSELR+ + G AC SAC AF +PE+CC+GA +
Sbjct: 139 IKPQGGFGNCKYAGCVSDINEICPSELRIMDPNSGSVAACKSACAAFSSPEFCCTGAHAT 198
Query: 57 PSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSSS 105
P +CSP+ YS MFK+ACP +YSYA+DDA+STFTCT + +Y ITFCP+ S
Sbjct: 199 PQTCSPTYYSSMFKNACPSAYSYAYDDASSTFTCTGS-NYLITFCPTQS 246
>At5g24620 thaumatin-like protein
Length = 420
Score = 129 bits (323), Expect = 3e-31
Identities = 62/113 (54%), Positives = 76/113 (66%), Gaps = 10/113 (8%)
Query: 4 TSGGS-GSCQATGCGEDLNRRCPSELRVDGGD--------ACNSACGAFGTPEYCCSGAF 54
T GG G+C ATGC D+N CP EL+V G + AC SAC AFG +YCCSG F
Sbjct: 145 TGGGLVGACNATGCVADINISCPKELQVMGEEEAERGGVVACKSACEAFGLDQYCCSGQF 204
Query: 55 GSPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSSSPR 107
+P++C PS+YS +FK ACP++YSYAFDD TSTFTC A+ +Y I FCP R
Sbjct: 205 ANPTTCRPSLYSSIFKRACPRAYSYAFDDGTSTFTCKAS-EYAIIFCPGRVKR 256
>At1g19320 pathogenesis-related protein 5 precursor, putative
Length = 247
Score = 128 bits (322), Expect = 4e-31
Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 4/103 (3%)
Query: 2 VETSGGSGSCQATGCGEDLNRRCPSELRVDGGD---ACNSACGAFGTPEYCCSGAFGSPS 58
+ GGSG C+ GC D+N CP EL+V G AC SAC AF PEYCC+GA+ +P+
Sbjct: 145 ITPQGGSGDCKTAGCVSDVNAICPKELQVTGPSGVAACKSACEAFNKPEYCCTGAYSTPA 204
Query: 59 SCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFC 101
+C P+ YS++FK ACP +YSYA+DDA+STFTCT A +Y I+FC
Sbjct: 205 TCPPTNYSKIFKQACPSAYSYAYDDASSTFTCTNA-NYEISFC 246
>At1g75050 thaumatin-like protein
Length = 257
Score = 126 bits (317), Expect = 2e-30
Identities = 58/107 (54%), Positives = 75/107 (69%), Gaps = 6/107 (5%)
Query: 2 VETSGGSGSCQATGCGEDLNRRCPSELRVDGGD-----ACNSACGAFGTPEYCCSGAFGS 56
++ GGSG C GC D+N CP+ELR+ AC SAC AF + E+CC+GA +
Sbjct: 150 IKPQGGSGDCHYAGCVADVNAVCPNELRLMDPHTGIIAACKSACAAFNSEEFCCTGAHAT 209
Query: 57 PSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPS 103
P +CSP+ YS MFKSACP +YSYA+DDATSTFTCT + +Y I+FCP+
Sbjct: 210 PQTCSPTHYSAMFKSACPGAYSYAYDDATSTFTCTGS-NYLISFCPT 255
>At4g38670 thaumatin-like protein
Length = 281
Score = 125 bits (314), Expect = 3e-30
Identities = 56/99 (56%), Positives = 66/99 (66%), Gaps = 5/99 (5%)
Query: 9 GSCQATGCGEDLNRRCPSELRV-----DGGDACNSACGAFGTPEYCCSGAFGSPSSCSPS 63
G C ATGC DLN CP +L++ G AC SAC AFG P YCCS A+ +P +C PS
Sbjct: 149 GGCGATGCLVDLNGACPRDLKLVTRGNGNGVACRSACEAFGDPRYCCSDAYATPDTCQPS 208
Query: 64 VYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
VYS FK ACP++YSYA+DD TST+TC DY I FCP
Sbjct: 209 VYSLFFKHACPRAYSYAYDDKTSTYTCATGADYFIIFCP 247
>At1g73620 thaumatin like protein
Length = 264
Score = 124 bits (312), Expect = 6e-30
Identities = 56/101 (55%), Positives = 69/101 (67%), Gaps = 6/101 (5%)
Query: 7 GSGSCQATGCGEDLNRRCPSELRVDGGD-----ACNSACGAFGTPEYCCSGAFGSPSSCS 61
G+G C GC DLNR CP L+V D AC SAC AF +P YCC+G FG+P SC
Sbjct: 161 GTGKCTYAGCVSDLNRMCPVGLQVRSRDGTQVVACKSACSAFNSPRYCCTGLFGNPQSCK 220
Query: 62 PSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
P+ YS++FK ACPK+YSYA+DD TS TC+ A +Y +TFCP
Sbjct: 221 PTAYSKIFKVACPKAYSYAYDDPTSIATCSKA-NYVVTFCP 260
>At1g18250 putative protein
Length = 243
Score = 123 bits (308), Expect = 2e-29
Identities = 55/101 (54%), Positives = 70/101 (68%), Gaps = 6/101 (5%)
Query: 7 GSGSCQATGCGEDLNRRCPSELRVDGGD-----ACNSACGAFGTPEYCCSGAFGSPSSCS 61
GSG C GC DLN+ CP L+V + AC SAC AF +P+YCC+G FG+P SC
Sbjct: 140 GSGQCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCK 199
Query: 62 PSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
P+ YS++FK ACPK+YSYA+DD TS TC+ A +Y +TFCP
Sbjct: 200 PTAYSKIFKVACPKAYSYAYDDPTSIATCSKA-NYIVTFCP 239
>At1g75040 thaumatin-like protein
Length = 239
Score = 122 bits (306), Expect = 3e-29
Identities = 57/104 (54%), Positives = 69/104 (65%), Gaps = 4/104 (3%)
Query: 2 VETSGGSGSCQATGCGEDLNRRCPSELRVDGGD---ACNSACGAFGTPEYCCSGAFGSPS 58
+ SGGSG C+ GC DLN CP L+V + AC SAC F T +YCC GA P
Sbjct: 137 IRPSGGSGDCKYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPE 196
Query: 59 SCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
+C P+ YS +FK+ACP +YSYA+DD TSTFTCT A +Y ITFCP
Sbjct: 197 TCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTGA-NYEITFCP 239
>At5g38280 receptor serine/threonine kinase PR5K
Length = 665
Score = 113 bits (283), Expect = 1e-26
Identities = 50/104 (48%), Positives = 69/104 (66%), Gaps = 7/104 (6%)
Query: 7 GSG-SCQATGCGEDLNRRCPSELRVDGGD------ACNSACGAFGTPEYCCSGAFGSPSS 59
GSG +C GC +LN+ CPSEL+V G AC +AC FG PE+CC G +G P+
Sbjct: 148 GSGRTCSNVGCVVNLNKTCPSELKVMGSSNKEHPIACMNACQKFGLPEFCCYGEYGKPAK 207
Query: 60 CSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPS 103
C P++YS FK+ CP +YSYA+D+ +TF C+ + +Y ITFCP+
Sbjct: 208 CQPTLYSTNFKNECPLAYSYAYDNENNTFRCSNSPNYVITFCPN 251
>At1g77700 thaumatin-like protein
Length = 356
Score = 113 bits (283), Expect = 1e-26
Identities = 52/105 (49%), Positives = 63/105 (59%), Gaps = 4/105 (3%)
Query: 2 VETSGGSGSCQATGCGEDLNRRCPSELRVDGGD---ACNSACGAFGTPEYCCSGAFGSPS 58
V G G+C GC DL CP EL V +C SAC F EYCC G +G+P
Sbjct: 198 VTPMNGKGNCSVAGCVADLRPHCPQELAVKSNGKVISCRSACDVFDRDEYCCRGVYGNPV 257
Query: 59 SCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPS 103
C P+ YS++FK ACP +YSYA+DD TS TCTA+ DY I+FC S
Sbjct: 258 VCQPTYYSKIFKQACPTAYSYAYDDPTSIMTCTAS-DYVISFCSS 301
>At2g24810 putative thaumatin-like pathogenesis-related protein
Length = 193
Score = 101 bits (251), Expect = 7e-23
Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Query: 18 EDLNRRCPSELRVDGGD---ACNSACGAFGTPEYCCSGAFGSPSSCSPSVYSEMFKSACP 74
E R SELRV+G AC SAC AF PEYCC+GAF P +C P+ YS++FK ACP
Sbjct: 107 ESRRRLQRSELRVNGSSGVVACKSACEAFNKPEYCCTGAFSKPETCPPTKYSKIFKGACP 166
Query: 75 KSYSYAFDDATSTFTCTAADDYTITFC 101
+YSY +D A+S FTCT+A +Y I+FC
Sbjct: 167 TAYSYVYDYASSRFTCTSA-NYVISFC 192
>At5g02140 thaumatin-like protein
Length = 294
Score = 97.4 bits (241), Expect = 1e-21
Identities = 47/103 (45%), Positives = 64/103 (61%), Gaps = 4/103 (3%)
Query: 6 GGSGSCQATGCGEDLNRRCPSELRV--DGGDA-CNSACGAFGTPEYCCSGAFGSPSSCSP 62
GG C C +LN CPS L V DG C SAC A + +YCC+G + +P +C P
Sbjct: 143 GGGVGCGVAACEVNLNICCPSALEVKRDGKVVGCKSACLAMQSAKYCCTGEYANPQACKP 202
Query: 63 SVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSSS 105
++++ +FK+ CPK+YSYAFDD++S C A+ Y ITFCP S
Sbjct: 203 TLFANLFKAICPKAYSYAFDDSSSLNKCRAS-RYVITFCPPKS 244
>At5g40020 thaumatin-like protein
Length = 256
Score = 96.3 bits (238), Expect = 2e-21
Identities = 46/108 (42%), Positives = 61/108 (55%), Gaps = 5/108 (4%)
Query: 1 MVETSGGSGSCQATGCGEDLNRRCPSELRVDGGD----ACNSACGAFGTPEYCCSGAFGS 56
+V + S C GC +DL CP EL+V + AC SAC AF +CC A+G+
Sbjct: 144 VVNSKPVSSKCTILGCHKDLKTTCPEELQVLNEEGRVVACKSACLAFDNDRFCCRNAYGT 203
Query: 57 PSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSS 104
P C + YS +FK ACP YSYA++ TC +A +Y ITFCPS+
Sbjct: 204 PEKCKRNTYSMLFKEACPNYYSYAYETPPPLVTC-SAKEYLITFCPSN 250
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.316 0.130 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,916,000
Number of Sequences: 26719
Number of extensions: 128027
Number of successful extensions: 336
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 255
Number of HSP's gapped (non-prelim): 63
length of query: 107
length of database: 11,318,596
effective HSP length: 83
effective length of query: 24
effective length of database: 9,100,919
effective search space: 218422056
effective search space used: 218422056
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)
Medicago: description of AC121233.12