BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC119408.7 + phase: 0 /pseudo
         (218 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g47420 unknown protein                                             336  5e-93
At4g17420 unknown protein                                             317  2e-87
At5g35700 fimbrin                                                      29  1.7
At1g79550 phosphoglycerate kinase (EC 2.7.2.3) like protein            29  2.2
At5g46850 unknown protein                                              27  6.4

>At5g47420 unknown protein
          Length = 282

 Score =  336 bits (862), Expect = 5e-93
 Identities = 163/214 (76%), Positives = 188/214 (87%), Gaps = 1/214 (0%)

Query: 1   MAAPFFSTPFQPYVYQSQQDAIIPFQILGGESQVVQIMLKPHEKIIAKPGSMCFMSGSVE 60
           MAAPFFSTPFQPYVYQSQQD I PFQILGGESQVVQIMLK  EK+IAKP SMC+MSGS+E
Sbjct: 1   MAAPFFSTPFQPYVYQSQQDTITPFQILGGESQVVQIMLKSEEKVIAKPASMCYMSGSIE 60

Query: 61  MENAYLPENEVGIWQWLFGKTVTNIVVRNSGPSDGFVGIAAPYFARILPIDLATFNGEIL 120
           MEN Y PE EVG+ QW+ GK+V+++V+RN+G +DGFVGIAAPY ARILPIDLA F GEIL
Sbjct: 61  MENTYTPEQEVGVLQWILGKSVSSVVLRNTGQNDGFVGIAAPYLARILPIDLAMFGGEIL 120

Query: 121 CQPDAFLCSVNDVKVSNTVDQRGRNVV-AGAEVFLRQKLSGQGLAFILGGGSVVQKILEV 179
           CQPDAFLCSV+DVKV N+VDQR RN+V AGAE FLRQ+LSGQGLAFIL GGSVVQK+LEV
Sbjct: 121 CQPDAFLCSVHDVKVVNSVDQRARNIVAAGAEGFLRQRLSGQGLAFILAGGSVVQKVLEV 180

Query: 180 GEVLAVDVSCIVAVTSTVDIQIKYNGPARRTMFG 213
           GEV ++DVSCI A+T ++D++IK N P RR +FG
Sbjct: 181 GEVFSIDVSCIAALTPSIDVRIKNNAPFRRALFG 214


>At4g17420 unknown protein
          Length = 285

 Score =  317 bits (813), Expect = 2e-87
 Identities = 159/217 (73%), Positives = 185/217 (84%), Gaps = 4/217 (1%)

Query: 1   MAAPFFSTPFQPYVYQSQQDAIIPFQILGGESQVVQIMLKPHEKIIAKPGSMCFMSGSVE 60
           MAAPFFSTPFQPYVYQSQ+D I PFQILGGE+QVVQIMLKP EK+IAKPGSMC+MSGS+E
Sbjct: 1   MAAPFFSTPFQPYVYQSQEDTITPFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIE 60

Query: 61  MENAYLPENEVGIWQWLFGKTVTNIVVRNSGPSDGFVGIAAPYFARILPIDLATFNGEIL 120
           M+N Y PE EVG+ QW+ GK+V++IV+RN+G +DGFVGIAAP  ARILP+DLA F G+IL
Sbjct: 61  MDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDIL 120

Query: 121 CQPDAFLCSVNDVKVSNTVDQ--RGRNV-VAGAEVFLRQKLSGQGLAFILGGGSVVQKIL 177
           CQPDAFLCSV+DVKV NTV Q  R RN+  AGAE  LRQ+LSGQGLAFI+ GGSVVQK L
Sbjct: 121 CQPDAFLCSVHDVKVVNTVYQRHRARNIAAAGAEGVLRQRLSGQGLAFIIAGGSVVQKNL 180

Query: 178 EVGEVLAVDVSCIVAVTSTVDIQIKYN-GPARRTMFG 213
           EVGEVL +DVSCI A+T +++ QIKYN  P RR +FG
Sbjct: 181 EVGEVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFG 217


>At5g35700 fimbrin
          Length = 687

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 16/44 (36%), Positives = 22/44 (49%)

Query: 102 PYFARILPIDLATFNGEILCQPDAFLCSVNDVKVSNTVDQRGRN 145
           P+    LPID AT     L +    LC + +V V  T+D+R  N
Sbjct: 140 PFLKSYLPIDPATNAFFDLVKDGVLLCKLINVAVPGTIDERAIN 183


>At1g79550 phosphoglycerate kinase (EC 2.7.2.3) like protein
          Length = 401

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 148 AGAEVFLRQ--KLSGQGLAFILGGGSVVQKILEVG 180
           AG E   +Q  +LSG+G+  I+GGG  V  + +VG
Sbjct: 334 AGTEAVAKQLAELSGKGVTTIIGGGDSVAAVEKVG 368


>At5g46850 unknown protein
          Length = 296

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 17/64 (26%), Positives = 31/64 (47%), Gaps = 3/64 (4%)

Query: 84  NIVVRNSGPSDGFVGIAAPYFARILPIDLATFNGEILCQPDAFLCSVNDVKVSNTVDQRG 143
           ++ + +    +G +    P  AR  P+D + ++     +PD FLCS +   V N   +R 
Sbjct: 174 HVEISSRNYENGEISFKLPLHARYQPLDDSGYSRVEFGEPDLFLCSSH---VQNQRRERR 230

Query: 144 RNVV 147
           R +V
Sbjct: 231 RCLV 234


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.322    0.139    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,689,483
Number of Sequences: 26719
Number of extensions: 187706
Number of successful extensions: 345
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 339
Number of HSP's gapped (non-prelim): 5
length of query: 218
length of database: 11,318,596
effective HSP length: 95
effective length of query: 123
effective length of database: 8,780,291
effective search space: 1079975793
effective search space used: 1079975793
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)