TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149576.1 - phase: 1 
         (110 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC93787 similar to GP|19571824|emb|CAD27418. c6 type cytochrome ...   230  5e-62
TC86313 similar to GP|4995890|emb|CAB44316.1 serine palmitoyltra...    28  0.41
AW691226 homologue to GP|12053025|emb hypothetical protein {Homo...    26  2.7
TC87025 similar to PIR|S27757|S27757 embryonic abundant protein ...    25  4.6
TC88114 similar to GP|9757818|dbj|BAB08336.1 emb|CAB92117.1~gene...    25  6.0
AJ504344                                                               25  6.0
BE187549                                                               25  6.0
TC83804 similar to GP|9759246|dbj|BAB09770.1 sugar transporter-l...    25  6.0
TC91114 weakly similar to GP|11994595|dbj|BAB02650. receptor-lik...    24  7.8

>TC93787 similar to GP|19571824|emb|CAD27418. c6 type cytochrome
           {Arabidopsis thaliana}, partial (70%)
          Length = 818

 Score =  230 bits (587), Expect = 5e-62
 Identities = 110/110 (100%), Positives = 110/110 (100%)
 Frame = +2

Query: 1   SIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGK 60
           SIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGK
Sbjct: 275 SIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGK 454

Query: 61  GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSIETEQK 110
           GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSIETEQK
Sbjct: 455 GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSIETEQK 604


>TC86313 similar to GP|4995890|emb|CAB44316.1 serine palmitoyltransferase
            {Solanum tuberosum}, partial (98%)
          Length = 2052

 Score = 28.5 bits (62), Expect = 0.41
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +2

Query: 30   IQPGSTLFTKDLQRNGV----DTEEEIYRVTYYGKGRMPGFGKECM 71
            I+  S  F  +LQ+ G     D +  +  +  Y   ++P F +EC+
Sbjct: 1334 IRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL 1471


>AW691226 homologue to GP|12053025|emb hypothetical protein {Homo sapiens},
           partial (1%)
          Length = 343

 Score = 25.8 bits (55), Expect = 2.7
 Identities = 10/24 (41%), Positives = 14/24 (57%)
 Frame = -1

Query: 62  RMPGFGKECMPRGQCTFGARLEDE 85
           R  GFG++C+    C  G+  EDE
Sbjct: 295 RRDGFGRDCLKLRSCEVGSL*EDE 224


>TC87025 similar to PIR|S27757|S27757 embryonic abundant protein  59K -
           soybean, partial (56%)
          Length = 1353

 Score = 25.0 bits (53), Expect = 4.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 13  TLFSQTCIGCHDA 25
           TL S TC+GC DA
Sbjct: 183 TLISSTCLGCFDA 145


>TC88114 similar to GP|9757818|dbj|BAB08336.1
           emb|CAB92117.1~gene_id:MWD9.17~similar to unknown
           protein {Arabidopsis thaliana}, partial (96%)
          Length = 1337

 Score = 24.6 bits (52), Expect = 6.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 14  LFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGV 46
           +F QTC  CH     +I+  + L T+  QRN V
Sbjct: 714 IFIQTCKTCHICNTVLIKILTLLSTESSQRNCV 812


>AJ504344 
          Length = 457

 Score = 24.6 bits (52), Expect = 6.0
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 30  IQPGSTLFTKDLQRNGVDTEEEIYR 54
           + PG T+F++D++R+  D E +  +
Sbjct: 109 MSPGMTIFSEDIKRDDDDIENQFLK 183


>BE187549 
          Length = 598

 Score = 24.6 bits (52), Expect = 6.0
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 30  IQPGSTLFTKDLQRNGVDTEEEIYR 54
           + PG T+F++D++R+  D E +  +
Sbjct: 352 MSPGMTIFSEDIKRDDDDIENQFLK 426


>TC83804 similar to GP|9759246|dbj|BAB09770.1 sugar transporter-like protein
           {Arabidopsis thaliana}, partial (29%)
          Length = 721

 Score = 24.6 bits (52), Expect = 6.0
 Identities = 12/32 (37%), Positives = 18/32 (55%), Gaps = 1/32 (3%)
 Frame = -2

Query: 14  LFSQTCIGCHDAGGNIIQPG-STLFTKDLQRN 44
           L S + I CH   G ++ PG   LF  +L++N
Sbjct: 720 LLSASQILCHQVAGPLVCPGKQLLFPSNLEKN 625


>TC91114 weakly similar to GP|11994595|dbj|BAB02650. receptor-like
           serine/threonine kinase {Arabidopsis thaliana}, partial
           (7%)
          Length = 678

 Score = 24.3 bits (51), Expect = 7.8
 Identities = 8/26 (30%), Positives = 15/26 (56%)
 Frame = +2

Query: 77  TFGARLEDEDIKILAEFVKLQADKGW 102
           +FGA L  +++++L +  K    K W
Sbjct: 224 SFGATLSKDEVEVLKDIAKTLGKKDW 301


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.139    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,008,434
Number of Sequences: 36976
Number of extensions: 32587
Number of successful extensions: 126
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of query: 110
length of database: 9,014,727
effective HSP length: 86
effective length of query: 24
effective length of database: 5,834,791
effective search space: 140034984
effective search space used: 140034984
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)