TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149574.8 + phase: 0 /pseudo
         (868 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG586255 similar to GP|7682800|gb Hypothetical protein T15F17.l ...    94  3e-19
BG644677 weakly similar to GP|7682800|gb| Hypothetical protein T...    62  1e-09
TC77196 similar to GP|17063848|gb|AAL35216.1 4-coumarate:CoA lig...    29  8.8
TC87649 similar to SP|Q9SZR1|ACAA_ARATH Potential calcium-transp...    29  8.8

>BG586255 similar to GP|7682800|gb Hypothetical protein T15F17.l {Arabidopsis
           thaliana}, partial (12%)
          Length = 436

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 54/129 (41%), Positives = 75/129 (57%)
 Frame = -3

Query: 16  TCSYTKWTCRIIY*AYTVNCKTTSHEM*TPNFHLGTCNSACCNIDSHPANQLS*LFPFEI 75
           TC+YT+W  RI++*   V+  T +HE+   +  LGTC   CC I++H A Q +*+F   I
Sbjct: 389 TCTYTEWIGRILH*KNPVDYSTITHEVKATSISLGTCGITCC*INTHKAIQ*T*IFSIPI 210

Query: 76  GFWSRT*YFPSANIWMCGVCSNFSTTTH*DGSSKKVGNICWI*ISIYYKVSRTHDRRFIY 135
              S     P  NIW+  V    +TT + +G+SK+ GNICW * S +Y +S  +  RFI 
Sbjct: 209 TLGSCARRIPYQNIWISCVRPYCTTTQNKNGTSKEDGNICWF*FSNHY*IS*AYYWRFI* 30

Query: 136 SSIC*LSL* 144
             IC*LS *
Sbjct: 29  GHIC*LSF* 3


>BG644677 weakly similar to GP|7682800|gb| Hypothetical protein T15F17.l
           {Arabidopsis thaliana}, partial (3%)
          Length = 539

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 38/94 (40%), Positives = 53/94 (55%)
 Frame = -2

Query: 658 YIIFC*PIIKIQFFTYTKTLEWGQACTSLSSRYNGYGFVLS*STQTRINWLCRCRLFIRS 717
           Y +F *  IKI   +Y +TL+W Q    +S R   YG +L *   +R  WLC C +FI  
Sbjct: 505 YNLFD*FAIKI*LCSYYETLKWNQTHMQVSKRDY*YGLILF*RL*SRPYWLC*CMIFI*P 326

Query: 718 SSW*ITNRLFVYKWKYNNFMEICETDNNSNIIKS 751
           +  *I NRL ++ W+Y + +EI E    S+ IKS
Sbjct: 325 T*S*ILNRLHIHMWEYCHILEIYEIVYYSHFIKS 224


>TC77196 similar to GP|17063848|gb|AAL35216.1 4-coumarate:CoA ligase {Amorpha
            fruticosa}, partial (93%)
          Length = 1924

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 15/32 (46%), Positives = 19/32 (58%), Gaps = 1/32 (3%)
 Frame = +2

Query: 703  TRINWLCRCRLFIRSSSW*ITNRLFV-YKWKY 733
            T  N+ CRCR  +R SSW*  + +    KWKY
Sbjct: 1490 TSSNFRCRCRPNVR*SSW*GASSICCKIKWKY 1585


>TC87649 similar to SP|Q9SZR1|ACAA_ARATH Potential calcium-transporting
           ATPase 10  plasma membrane-type (EC 3.6.3.8), partial
           (43%)
          Length = 2159

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = -1

Query: 765 CLVKIHDSAHPKEL----WFILRKNGCNNNLRR*YNMHRSVE 802
           C   IHD  HPK+L    W I R N C+N++   YN  R ++
Sbjct: 992 CS*SIHDKIHPKKLHCVQWNITRGN-CSNHI---YNKSRHID 879


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.372    0.163    0.676 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,225,318
Number of Sequences: 36976
Number of extensions: 563755
Number of successful extensions: 7053
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 5478
Number of HSP's gapped (non-prelim): 1957
length of query: 868
length of database: 9,014,727
effective HSP length: 105
effective length of query: 763
effective length of database: 5,132,247
effective search space: 3915904461
effective search space used: 3915904461
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (22.0 bits)
S2: 63 (28.9 bits)