BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149546.4 - phase: 0
(182 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC79765 similar to GP|7670050|dbj|BAA94972.1 type I collagen alp... 51 2e-07
BG457583 similar to GP|13561982|gb flagelliform silk protein {Ar... 44 3e-05
TC93037 weakly similar to GP|3004934|gb|AAC09237.1| annexin XIV ... 44 4e-05
TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans P... 42 2e-04
BQ144271 weakly similar to GP|21322711|em pherophorin-dz1 protei... 41 2e-04
TC80031 similar to GP|21327989|dbj|BAC00578. contains ESTs AU093... 40 5e-04
TC76827 similar to GP|17154773|gb|AAL35979.1 extensin-like prote... 39 0.001
BE999686 similar to SP|O70133|DDX9 ATP-dependent RNA helicase A ... 37 0.003
TC78850 homologue to GP|10177413|dbj|BAB10544. fibrillarin-like ... 37 0.004
TC88879 weakly similar to PIR|T04011|T04011 hypothetical protein... 36 0.007
TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 36 0.010
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy... 35 0.013
TC85943 similar to PIR|T07080|T07080 shock protein SRC2 - soybea... 34 0.028
BQ144482 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 34 0.028
TC89983 similar to GP|14331087|emb|CAC40974. hypothetical protei... 34 0.028
TC77828 similar to GP|16648867|gb|AAL24285.1 HSP associated prot... 34 0.037
TC82284 weakly similar to GP|11119510|gb|AAF37724.2 diaphanous p... 34 0.037
BG580942 weakly similar to GP|21536546|gb| unknown {Arabidopsis ... 34 0.037
TC81144 similar to PIR|T04462|T04462 hypothetical protein F4D11.... 33 0.063
BQ144380 similar to GP|1185397|gb|A SH3 domain binding protein {... 33 0.082
>TC79765 similar to GP|7670050|dbj|BAA94972.1 type I collagen alpha 1
{Xenopus laevis}, partial (2%)
Length = 520
Score = 51.2 bits (121), Expect = 2e-07
Identities = 35/88 (39%), Positives = 41/88 (45%), Gaps = 10/88 (11%)
Frame = -3
Query: 44 PYSPGGQFYGIPDGGPGEPI--------PPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 95
P +PGG + GGPGEP PP+ P +PGG + GGPGEP P P
Sbjct: 512 PSAPGGGY-----GGPGEPSAPGGGYGEPPKEPSAPGGGY-----GGPGEPSGSINPGQP 363
Query: 96 GGQFYRIPDG--GPGEPIPLRRPYSPGG 121
G + G GPGEP P PGG
Sbjct: 362 GDPGEPVEPGPVGPGEP-----PGKPGG 294
Score = 38.5 bits (88), Expect = 0.001
Identities = 28/76 (36%), Positives = 31/76 (39%)
Frame = -3
Query: 33 GGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP 92
GGP EP P Y + P GG G P P +PG G PGEP+ P P
Sbjct: 488 GGPGEPSAPGGGYGEPPKEPSAPGGGYGGPGEPSGSINPG------QPGDPGEPVEP-GP 330
Query: 93 YSPGGQFYRIPDGGPG 108
PG P G PG
Sbjct: 329 VGPGE-----PPGKPG 297
Score = 32.0 bits (71), Expect = 0.14
Identities = 25/66 (37%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +1
Query: 29 GIPDG--GPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEP 86
G P G GP P P SPG P G PG P PP G P G G P
Sbjct: 301 GFPGGSPGPTGPGSTGSPGSPGCPGLIDPLGSPGPP*PPPGALGSLGGSP*PPPGALGSP 480
Query: 87 IPPRRP 92
PP P
Sbjct: 481 GPP*PP 498
Score = 27.3 bits (59), Expect = 3.4
Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Frame = +1
Query: 40 PPRRPYSPGGQFYGIPDGGPGEPIPP---RRPYSPGGQFYGIPDGGPGEPIPPRRPYSPG 96
PP P P G G +PP R P PGG GP P P SPG
Sbjct: 205 PPATPEPPPGVLSVSTLGILAVILPPCSLRPPGFPGGS------PGPTGPGSTGSPGSPG 366
Query: 97 GQFYRIPDGGPGEPIP 112
P G PG P P
Sbjct: 367 CPGLIDPLGSPGPP*P 414
>BG457583 similar to GP|13561982|gb flagelliform silk protein {Argiope
trifasciata}, partial (8%)
Length = 269
Score = 44.3 bits (103), Expect = 3e-05
Identities = 41/91 (45%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = -2
Query: 40 PPRR--PYSPG----GQFYGIPDG-GPGEPIPPRR-PYSPGGQFYGIPDGGPGEPIPPRR 91
PP R P PG G G P G GPG P P R P PGG P GGPG P P R
Sbjct: 265 PPARGGPGGPGPGGPGPMRGGPGGPGPGGPGPMRGGPGGPGGP----PRGGPGGPGPMR- 101
Query: 92 PYSPGGQFYRIPDGGPGEPIPLR-RPYSPGG 121
GG GGPG P P+R P PGG
Sbjct: 100 ----GGP------GGPGGPGPMRGGPGGPGG 38
Score = 41.2 bits (95), Expect = 2e-04
Identities = 36/93 (38%), Positives = 36/93 (38%), Gaps = 4/93 (4%)
Frame = +3
Query: 2 RGGHYAASRGGAPFA-GPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPG 60
R G RGG P GP R I G P P PPR P G G P G PG
Sbjct: 6 RAGPPGPPRGGPPGPPGPPR---------IGPGPPGPPGPPRIGPGPPGPPRGGPPGPPG 158
Query: 61 EPI---PPRRPYSPGGQFYGIPDGGPGEPIPPR 90
P P P PG G GPG P PPR
Sbjct: 159PPRIGPGPPGPGPPGPPRIGPGPPGPGPPGPPR 257
Score = 40.4 bits (93), Expect = 4e-04
Identities = 35/85 (41%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +3
Query: 29 GIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIP 88
G P GGP P P R I G PG P PPR P G G G PG P P
Sbjct: 21 GPPRGGPPGPPGPPR----------IGPGPPGPPGPPRIGPGPPGPPRG---GPPGPPGP 161
Query: 89 PR-RPYSPGGQFYRIPDGGPGEPIP 112
PR P PG P GPG P P
Sbjct: 162 PRIGPGPPGPGPPGPPRIGPGPPGP 236
Score = 40.0 bits (92), Expect = 5e-04
Identities = 39/88 (44%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = -2
Query: 29 GIPDG-GPIEPIPPRR-PYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEP 86
G P G GP P P R P PG G GGPG P P R PGG G GGPG P
Sbjct: 253 GGPGGPGPGGPGPMRGGPGGPGPGGPGPMRGGPGGPGGPPRG-GPGGP--GPMRGGPGGP 83
Query: 87 IPP----RRPYSPGGQFYRIPDGGPGEP 110
P P PGG P GGPG P
Sbjct: 82 GGPGPMRGGPGGPGGP----PRGGPGGP 11
Score = 36.2 bits (82), Expect = 0.007
Identities = 36/89 (40%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Frame = -2
Query: 9 SRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRR-PYSPGGQFYGIPDG---------G 58
+RGG GP R G P GP P P R P PGG G P G G
Sbjct: 259 ARGGPGGPGPGGPGPMRGGPGGP--GPGGPGPMRGGPGGPGGPPRGGPGGPGPMRGGPGG 86
Query: 59 PGEPIPPRR-PYSPGGQFYGIPDGGPGEP 86
PG P P R P PGG P GGPG P
Sbjct: 85 PGGPGPMRGGPGGPGGP----PRGGPGGP 11
Score = 35.8 bits (81), Expect = 0.010
Identities = 28/69 (40%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 53 GIPDGGP-GEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPI 111
G P GGP G P PPR I G PG P PPR P G P G PG P
Sbjct: 21 GPPRGGPPGPPGPPR-----------IGPGPPGPPGPPRIGPGPPGPPRGGPPGPPGPPR 167
Query: 112 PLRRPYSPG 120
P PG
Sbjct: 168 IGPGPPGPG 194
>TC93037 weakly similar to GP|3004934|gb|AAC09237.1| annexin XIV {Neurospora
crassa}, partial (33%)
Length = 778
Score = 43.9 bits (102), Expect = 4e-05
Identities = 34/93 (36%), Positives = 40/93 (42%), Gaps = 13/93 (13%)
Frame = +3
Query: 47 PGGQFYGIP--DGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPY------SPGGQ 98
P GQ YG P GG G PP Y P G +Y P G P PP+ + P GQ
Sbjct: 90 PHGQGYGQPPPQGGYGGYPPPGGQYPPQGGYYPPPGGPPPGQYPPQGGHYPPPQGPPPGQ 269
Query: 99 FYRIPDGGP-----GEPIPLRRPYSPGGQFDMP 126
+ + P GP G P P+ P SP G P
Sbjct: 270 YGQYPPQGPPPGQYGAPPPI--PPSPYGHSPAP 362
Score = 40.8 bits (94), Expect = 3e-04
Identities = 33/91 (36%), Positives = 40/91 (43%)
Frame = +3
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPR 90
P GG PP Y P G +Y P G P PP+ + P Q G P G G+ PP+
Sbjct: 120 PQGGYGGYPPPGGQYPPQGGYYPPPGGPPPGQYPPQGGHYPPPQ--GPPPGQYGQ-YPPQ 290
Query: 91 RPYSPGGQFYRIPDGGPGEPIPLRRPYSPGG 121
P P GQ+ P P P P +PGG
Sbjct: 291 GP--PPGQYGAPP---PIPPSPYGHSPAPGG 368
Score = 33.5 bits (75), Expect = 0.048
Identities = 36/104 (34%), Positives = 39/104 (36%), Gaps = 13/104 (12%)
Frame = -1
Query: 29 GIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYG----------I 78
G P G P P PY GG G P G P PY PGG +G
Sbjct: 391 GGPGGAP*PPGAGEWPYGDGGIGGGAPYWPGGGP*GGYWPYCPGGGPWGGG**PP*GGY* 212
Query: 79 PDGGP--GEPIPPRRPY-SPGGQFYRIPDGGPGEPIPLRRPYSP 119
P GGP G PP Y PGG P G G P P ++P
Sbjct: 211 PGGGPPGGG**PPCGGY*PPGGG*PPYPP*GGGWP*PWPCGWAP 80
Score = 31.2 bits (69), Expect = 0.24
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Frame = -1
Query: 44 PYSPGGQ-----FYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGG 97
PY GG F G P G P P PY GG G P G P PY PGG
Sbjct: 433 PYCCGGGAP*D*FGGGPGGAP*PPGAGEWPYGDGGIGGGAPYWPGGGP*GGYWPYCPGG 257
>TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans PQN-75
protein (corresponding sequence W03D2.1b)
{Caenorhabditis elegans}, partial (10%)
Length = 546
Score = 41.6 bits (96), Expect = 2e-04
Identities = 40/140 (28%), Positives = 49/140 (34%)
Frame = +3
Query: 14 PFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGG 73
P PSRHY R P P PP RP S +PD G P PP P
Sbjct: 216 PICAPSRHYPPRIG---PRSPPTTGSPPTRPPSSP-----LPDPTTGSPPPPGSPP---- 359
Query: 74 QFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPGGQFDMPFMGRHVD 133
PD PG P P PD PG P P P P ++ + H+
Sbjct: 360 -----PDPTPGSPPPS-------------PDPTPGSPPPPGSP--PDPSWESFLVAEHML 479
Query: 134 DPYLYDDNMRGIKRPFHMTV 153
P + R + R F + +
Sbjct: 480 KP---NSTKRAMLRTFEVAI 530
>BQ144271 weakly similar to GP|21322711|em pherophorin-dz1 protein {Volvox
carteri f. nagariensis}, partial (5%)
Length = 919
Score = 41.2 bits (95), Expect = 2e-04
Identities = 27/85 (31%), Positives = 36/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 29 GIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPG---E 85
G+ + GP P P P +P GIP+ P +P PPR P + P PG
Sbjct: 28 GLHEFGPRRPSTPHAPANPPIPPRGIPNASPHQPHPPR----PSAR---APPAAPGTIPP 186
Query: 86 PIPPRRPYSPGGQFYRIPDGGPGEP 110
P+P P+ P + I PG P
Sbjct: 187 PLPSDPPHPPPNTHHPIQAPSPGPP 261
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 53 GIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPG---E 109
G+ + GP P P P +P GIP+ P +P PPR P R P PG
Sbjct: 28 GLHEFGPRRPSTPHAPANPPIPPRGIPNASPHQPHPPR----PSA---RAPPAAPGTIPP 186
Query: 110 PIPLRRPYSP 119
P+P P+ P
Sbjct: 187 PLPSDPPHPP 216
>TC80031 similar to GP|21327989|dbj|BAC00578. contains ESTs AU093876(E1018)
AU093877(E1018)~unknown protein, partial (8%)
Length = 902
Score = 40.0 bits (92), Expect = 5e-04
Identities = 42/114 (36%), Positives = 45/114 (38%), Gaps = 8/114 (7%)
Frame = +2
Query: 2 RGGHYAAS----RGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQF-YGIPD 56
RGG A RGG P G Y++ YG P P R Y P G+ YG P
Sbjct: 209 RGGAMAPGGFRGRGGGPGHGGRGGYNN---YG--------PTPGRGGYGPQGRGGYGTPP 355
Query: 57 GGPGE-PIPPRRPYSPGGQFYG--IPDGGPGEPIPPRRPYSPGGQFYRIPDGGP 107
GG G PPR Y P G G P G P P R SP Y P GP
Sbjct: 356 GGRGGYGPPPRGGYGPNGMRGGRPPPPGYQNGPAPYDRRPSPANN-YGAPLAGP 514
>TC76827 similar to GP|17154773|gb|AAL35979.1 extensin-like protein {Cucumis
sativus}, partial (60%)
Length = 1093
Score = 38.5 bits (88), Expect = 0.001
Identities = 27/78 (34%), Positives = 29/78 (36%)
Frame = +3
Query: 35 PIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYS 94
P PIPP P+ P IP P PIPP P P P PIPP P+
Sbjct: 273 PTLPIPPVLPHLPIPPTLPIPPVLPHLPIPPTLPIPPTLPIPPTLPIPPTLPIPPVLPHL 452
Query: 95 PGGQFYRIPDGGPGEPIP 112
P P G P P
Sbjct: 453 PVPPVLNPPSSGGSTPSP 506
>BE999686 similar to SP|O70133|DDX9 ATP-dependent RNA helicase A (Nuclear DNA
helicase II) (NDH II) (DEAD-box protein 9) (mHEL-5).,
partial (1%)
Length = 424
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/95 (30%), Positives = 38/95 (39%), Gaps = 28/95 (29%)
Frame = +1
Query: 31 PDGGP--------IEPIPPRRPYSPGGQ----FYGIPDGGPGEP---------------- 62
P GGP P PP++ + PGG F+G P GGP P
Sbjct: 118 PLGGPRGKGGQNFFPPPPPQKKFPPGGPKKIFFWGAPRGGPPPPQKNGGVKKKPPRKTRG 297
Query: 63 IPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGG 97
PPR+P PGG+ GP + P++ GG
Sbjct: 298 APPRKP-PPGGEKKIFGAKGPQKNFFPKKKKKGGG 399
Score = 29.6 bits (65), Expect = 0.69
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 38 PIPPRRPYSPGGQFYGIPDGGP--GEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 95
P PP + SP G GGP G P PP++ G P PG P PP+ P
Sbjct: 162 PPPPPKKISPRGAQKNFFLGGPPGGTPPPPKK----WGG*KKTPPKNPGCP-PPKTP-PG 323
Query: 96 GGQFYRIPDGGPGEPIPLRRPYSPGG 121
GG+ G P + P ++ GG
Sbjct: 324 GGKKNFWGQGPPKKFFPQKKKKGGGG 401
Score = 28.5 bits (62), Expect = 1.5
Identities = 25/81 (30%), Positives = 31/81 (37%), Gaps = 27/81 (33%)
Frame = +2
Query: 57 GGPGEPIPPRRP--YSPGGQFYG--------------IPDGGPGE--------PIPPRRP 92
GGP + P P +SP F G P G PGE P PP++
Sbjct: 5 GGPQKKKKPSPPVFFSPPKNFLGGAKKKQGVFWPKKKNPWGAPGEKGAKIFSPPPPPKKN 184
Query: 93 YSPGGQ---FYRIPDGGPGEP 110
+ PGG F+ P GG P
Sbjct: 185 FPPGGPKKFFFGGPPGGDPPP 247
>TC78850 homologue to GP|10177413|dbj|BAB10544. fibrillarin-like
{Arabidopsis thaliana}, partial (87%)
Length = 1177
Score = 37.0 bits (84), Expect = 0.004
Identities = 27/86 (31%), Positives = 34/86 (39%)
Frame = -1
Query: 36 IEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 95
I P+PP RP P P P+PP +P P P G P+PP +P P
Sbjct: 241 IPPLPPPRPLPP-----------PRAPLPPPKPLPP-------PRGLKSPPLPPPKPLPP 116
Query: 96 GGQFYRIPDGGPGEPIPLRRPYSPGG 121
+P P P+P P GG
Sbjct: 115 PPP---LPPLSP--PLPPNPPRPRGG 53
Score = 35.4 bits (80), Expect = 0.013
Identities = 23/72 (31%), Positives = 31/72 (42%)
Frame = -1
Query: 30 IPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPP 89
IP P P+PP R P + P G P+PP +P P +P P P+PP
Sbjct: 241 IPPLPPPRPLPPPRAPLPPPKPLPPPRGLKSPPLPPPKPLPPPPP---LPPLSP--PLPP 77
Query: 90 RRPYSPGGQFYR 101
P GG ++
Sbjct: 76 NPPRPRGGAMFK 41
>TC88879 weakly similar to PIR|T04011|T04011 hypothetical protein T5L19.200
- Arabidopsis thaliana, partial (6%)
Length = 1573
Score = 36.2 bits (82), Expect = 0.007
Identities = 35/125 (28%), Positives = 45/125 (36%), Gaps = 5/125 (4%)
Frame = +3
Query: 3 GGHYAASRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEP 62
GGH + + P A +Y YG P P+ +PP + P Q YG P
Sbjct: 681 GGH-SNPQPTYPQASAQANYAPPQQYGKP---PLYGVPPSQGQHP--QSYGHPRATQPGE 842
Query: 63 IP-----PRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPY 117
IP P + Y Q Y GP + P +P Y P PG+
Sbjct: 843 IPYQGPTPAQSYGTVQQPYPYASSGPSQAAYPTYGSAPAADGYSHPQSAPGQVYA----- 1007
Query: 118 SPGGQ 122
PGGQ
Sbjct: 1008QPGGQ 1022
>TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (19%)
Length = 555
Score = 35.8 bits (81), Expect = 0.010
Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Frame = +1
Query: 35 PIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYS 94
P P P P SPG P P P PP P SPG P P P PP+
Sbjct: 229 PGSPPKPPAPPSPGSPPAPAPAPPPIPPSPPAPP-SPGSP----PSPPPASPAPPKPTPP 393
Query: 95 PGGQFYRIPDGGPGEPIPL---RRPYSPGGQF 123
G +P+ P + +P SP G F
Sbjct: 394 KGSPLLPMPEKTPAPVM*FF*SFKPSSPAGTF 489
Score = 32.7 bits (73), Expect = 0.082
Identities = 25/68 (36%), Positives = 27/68 (38%)
Frame = +1
Query: 59 PGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYS 118
PG P P P SPG P P P PP P SPG P P P P +P
Sbjct: 229 PGSPPKPPAPPSPGSPPAPAPAPPPIPPSPPAPP-SPGSP----PSPPPASPAP-PKPTP 390
Query: 119 PGGQFDMP 126
P G +P
Sbjct: 391 PKGSPLLP 414
Score = 31.2 bits (69), Expect = 0.24
Identities = 26/84 (30%), Positives = 29/84 (33%), Gaps = 7/84 (8%)
Frame = +1
Query: 40 PPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPR-------RP 92
PP P SPG P +P P P SP P P P PP P
Sbjct: 208 PPPAPPSPGS---------PPKPPAPPSPGSPPAPAPAPPPIPPSPPAPPSPGSPPSPPP 360
Query: 93 YSPGGQFYRIPDGGPGEPIPLRRP 116
SP P G P P+P + P
Sbjct: 361 ASPAPPKPTPPKGSPLLPMPEKTP 432
>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
granulovirus}, partial (42%)
Length = 909
Score = 35.4 bits (80), Expect = 0.013
Identities = 29/85 (34%), Positives = 34/85 (39%), Gaps = 1/85 (1%)
Frame = +2
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPG-EPIPP 89
P GGP P P R PGG P PP++ GG+ P G PG + P
Sbjct: 590 PGGGPPPPHPGRGGGGPGGP----------PPPPPKKNSERGGR--AAPRGRPGTKRKNP 733
Query: 90 RRPYSPGGQFYRIPDGGPGEPIPLR 114
RRP G P G P + P R
Sbjct: 734 RRPAGSG------PRGAPAKKTPRR 790
Score = 35.4 bits (80), Expect = 0.013
Identities = 28/89 (31%), Positives = 33/89 (36%)
Frame = +2
Query: 33 GGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP 92
G P + PP P G P GGP P P R PGG P PP++
Sbjct: 524 GPPEKKTPPPTPKRRGKHTKRAPGGGPPPPHPGRGGGGPGGP----------PPPPPKKN 673
Query: 93 YSPGGQFYRIPDGGPGEPIPLRRPYSPGG 121
GG+ P G PG + P P G
Sbjct: 674 SERGGR--AAPRGRPG--TKRKNPRRPAG 748
Score = 35.0 bits (79), Expect = 0.016
Identities = 31/95 (32%), Positives = 36/95 (37%), Gaps = 13/95 (13%)
Frame = +2
Query: 40 PPRRPYSPGGQFYGIP-------DGGPGEPIPP------RRPYSPGGQFYGIPDGGPGEP 86
PPRR GG+ P +G +P P R P G +G P+ P
Sbjct: 374 PPRRGGGQGGRAPAPPPPPPKAREGRTPKPDPGSKENHNRTPGKEGPATHGPPEKKTPPP 553
Query: 87 IPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPGG 121
P RR G R P GGP P P R PGG
Sbjct: 554 TPKRR----GKHTKRAPGGGPPPPHPGRGGGGPGG 646
Score = 29.3 bits (64), Expect = 0.90
Identities = 22/65 (33%), Positives = 26/65 (39%)
Frame = -1
Query: 33 GGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP 92
G P P+P R G F +P G +PP + GG GGP P PPR
Sbjct: 768 GAPRGPLPAGRR----GFFLFVPGRPRGAALPPLSLFFLGGG-----GGGPPGPPPPRPG 616
Query: 93 YSPGG 97
GG
Sbjct: 615 CGGGG 601
>TC85943 similar to PIR|T07080|T07080 shock protein SRC2 - soybean, partial
(74%)
Length = 1279
Score = 34.3 bits (77), Expect = 0.028
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Frame = +3
Query: 3 GGHYAASRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRP---YSPGGQFYGIPDGGP 59
GG+ A GG P A P Y + +G P P PP++P Y P YG P
Sbjct: 741 GGYPPAQPGGYPPAQPGYGYPPQQGHGYPPQQPGYGYPPQQPGYGYPPQQPGYGYPGAQA 920
Query: 60 GEPIPPRRPYSPGGQFYGIPDGGP--GEPIPPRRPYSPG 96
+P + G G GG G+ I Y G
Sbjct: 921 QKPKKNKMGMGLGAGLLGGALGGMLIGDMISDASSYDAG 1037
>BQ144482 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (16%)
Length = 993
Score = 34.3 bits (77), Expect = 0.028
Identities = 41/128 (32%), Positives = 46/128 (35%), Gaps = 13/128 (10%)
Frame = +3
Query: 8 ASRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPY--SPGGQFYGIPDGGPGEPIPP 65
A+RGG P GP R P P P PP P+ P P P P PP
Sbjct: 99 AARGG-PGRGPGAAARPRDRPPPPKVAPRPPFPPPLPFYLRPPSPSPSPPPLSPPSPSPP 275
Query: 66 RRPYSP--GGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIP-LRR------- 115
P P G G+ GP P PP +P R G P P L R
Sbjct: 276 PPPPQPLLGP---GLRPPGPRPPAPPPPAPAPRPAPSRPSVGRPRRAAPSLARIAPPRNA 446
Query: 116 -PYSPGGQ 122
P SPGG+
Sbjct: 447 DPGSPGGE 470
Score = 28.5 bits (62), Expect = 1.5
Identities = 35/117 (29%), Positives = 42/117 (34%), Gaps = 11/117 (9%)
Frame = +2
Query: 2 RGGHYAASRGGAPFAG----PSRHYHDRAWYGIPDGGPIEPI--PPRRPYS-PGGQFYGI 54
RGG +R GA G P+ R P P P+ PP P S P F +
Sbjct: 92 RGGRAGRARPGAGRGGAAPRPAPAPQSRP---APTFSPPPPLLSPPPLPLSLPSPSFAPL 262
Query: 55 PDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGG----QFYRIPDGGP 107
P +PP P S P P PP RP P G + + P GGP
Sbjct: 263 P-------LPPPPPPSASPWPRPSPPRPPAPRAPPPRPGPPPGPVPPECWPAPPGGP 412
>TC89983 similar to GP|14331087|emb|CAC40974. hypothetical protein {Vibrio
sp. CH-291}, partial (26%)
Length = 761
Score = 34.3 bits (77), Expect = 0.028
Identities = 20/53 (37%), Positives = 23/53 (42%)
Frame = -3
Query: 57 GGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGE 109
G PG P+ P P PG G PG P+ P P PG +P G GE
Sbjct: 456 GVPGAPVVPGAPVFPGAP------GAPGAPVVPGVPGVPG-----VPAGAAGE 331
Score = 32.0 bits (71), Expect = 0.14
Identities = 18/51 (35%), Positives = 22/51 (42%)
Frame = -3
Query: 35 PIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGE 85
P+E P P PG + G PG P+ P P P G+P G GE
Sbjct: 468 PVELGVPGAPVVPGAPVFPGAPGAPGAPVVPGVPGVP-----GVPAGAAGE 331
Score = 27.3 bits (59), Expect = 3.4
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -3
Query: 81 GGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPG 120
G PG P+ P P PG G PG P+ P PG
Sbjct: 456 GVPGAPVVPGAPVFPGAP------GAPGAPVVPGVPGVPG 355
>TC77828 similar to GP|16648867|gb|AAL24285.1 HSP associated protein like
{Arabidopsis thaliana}, partial (83%)
Length = 1587
Score = 33.9 bits (76), Expect = 0.037
Identities = 31/84 (36%), Positives = 34/84 (39%), Gaps = 2/84 (2%)
Frame = -3
Query: 40 PPRRPYSPGGQFYGIPDGGPGEP-IPPRRPYSPGGQFYGIPDGGPGEP-IPPRRPYSPGG 97
PP P +PG P G P P PP P +PG P G P P PP P +PG
Sbjct: 1165 PPGMPPAPGK-----PPGMPPAPGKPPGMPPAPGN-----PPGMPPAPGNPPGMPPAPGN 1016
Query: 98 QFYRIPDGGPGEPIPLRRPYSPGG 121
P PG P P P P G
Sbjct: 1015 PPGMPPGNPPGMP-PGNPPGMPPG 947
Score = 32.3 bits (72), Expect = 0.11
Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -3
Query: 29 GIPDGGPIEP-IPPRRPYSPGGQFYGIPDGGPGEP-IPPRRPYSPGGQFYGIPDGGPGEP 86
G P G P P PP P +PG P G P P PP P +PG G+P G P
Sbjct: 1141 GKPPGMPPAPGKPPGMPPAPGN-----PPGMPPAPGNPPGMPPAPGNP-PGMPPGNPPGM 980
Query: 87 IPPRRPYSPGG 97
P P P G
Sbjct: 979 PPGNPPGMPPG 947
>TC82284 weakly similar to GP|11119510|gb|AAF37724.2 diaphanous protein
{Entamoeba histolytica}, partial (4%)
Length = 671
Score = 33.9 bits (76), Expect = 0.037
Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Frame = +1
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPI----PPRRPYSPGGQFYGIPDGGPGEP 86
P P+ P PP P G G P P P+ PP P + G P G P
Sbjct: 73 PPQAPLPPPPPPPQGLPPGAPMGNPPRAPPPPMSGSMPPPPPMAANG-----PRPGAMPP 237
Query: 87 IPPRRPYSPGGQFYRIPDGGPGE 109
+PP P P G PG+
Sbjct: 238 LPPPAPIGTRPPSMPPPQGFPGQ 306
>BG580942 weakly similar to GP|21536546|gb| unknown {Arabidopsis thaliana},
partial (24%)
Length = 588
Score = 33.9 bits (76), Expect = 0.037
Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Frame = +3
Query: 36 IEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPY-------------SPGGQFYGIPDGG 82
+ PP P S G Y P G P P PY + GG YG P
Sbjct: 174 VSTAPPAPPQS--GLPYPPPSGNNNYPYNPTPPYGNGGGDDGNNNNNNNGGGVYGAPP-- 341
Query: 83 PGEPIPPRRPYSPGGQFYRIPDGGPGE 109
P +PI P PY +YR+P P +
Sbjct: 342 PPDPILPYYPY-----YYRLPPNKPDD 407
>TC81144 similar to PIR|T04462|T04462 hypothetical protein F4D11.160 -
Arabidopsis thaliana, partial (13%)
Length = 1102
Score = 33.1 bits (74), Expect = 0.063
Identities = 29/87 (33%), Positives = 31/87 (35%), Gaps = 7/87 (8%)
Frame = +1
Query: 40 PPRRPYSPGGQFYGIPDGGPGEPIPPRRPY-------SPGGQFYGIPDGGPGEPIPPRRP 92
PP PGG G P GGP PP RP SP G P G P+
Sbjct: 28 PPGALVRPGG---GPPSGGPPNAGPPGRPTGPPPGQPSPFGSRPTGPPGSFAAPVSGVGV 198
Query: 93 YSPGGQFYRIPDGGPGEPIPLRRPYSP 119
PGG P G P + R SP
Sbjct: 199 PPPGGSPPLRPSGPPPQNFGARPSQSP 279
>BQ144380 similar to GP|1185397|gb|A SH3 domain binding protein {Rattus
norvegicus}, partial (12%)
Length = 1269
Score = 32.7 bits (73), Expect = 0.082
Identities = 25/82 (30%), Positives = 29/82 (34%)
Frame = -3
Query: 14 PFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGG 73
P P+ AW G GP PIPP P+SP P +P P + P
Sbjct: 292 PLPPPTSARSPHAWRGC---GPRPPIPPPNPHSPSPP--PPP*AADDDPQPKKEP----- 143
Query: 74 QFYGIPDGGPGEPIPPRRPYSP 95
GP PPR P P
Sbjct: 142 --------GPAPRRPPRHPDIP 101
Score = 27.3 bits (59), Expect = 3.4
Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Frame = -3
Query: 40 PPRRPYSPGGQF---YGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPG 96
PPR P P + GP PIPP P+SP P +P P + P
Sbjct: 304 PPRLPLPPPTSARSPHAWRGCGPRPPIPPPNPHSPSPP--PPP*AADDDPQPKKEP---- 143
Query: 97 GQFYRIPDGGPGEPIP 112
G R P P P P
Sbjct: 142 GPAPRRPPRHPDIPPP 95
Score = 27.3 bits (59), Expect = 3.4
Identities = 27/82 (32%), Positives = 33/82 (39%), Gaps = 19/82 (23%)
Frame = -1
Query: 6 YAASRGGAPFAGPS------RHYHDR--AWYGIPDGGPI----EPIPPRRPYSPGGQF-- 51
Y S + F+GPS R + R AW G PD P+ P+ P P GG
Sbjct: 414 YFPSAPSS*FSGPSPGSTLPRRWVLRSVAWLGHPDSSPLAFLSPPLHPPAPPMHGGDAAL 235
Query: 52 -----YGIPDGGPGEPIPPRRP 68
+ IP P P PP RP
Sbjct: 234 ARPSPHQIPT--PHPPPPPHRP 175
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.323 0.153 0.530
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,275,596
Number of Sequences: 36976
Number of extensions: 142627
Number of successful extensions: 1141
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of query: 182
length of database: 9,014,727
effective HSP length: 90
effective length of query: 92
effective length of database: 5,686,887
effective search space: 523193604
effective search space used: 523193604
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Medicago: description of AC149546.4