BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149307.14 - phase: 0
(629 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC83388 similar to GP|19699369|gb|AAL91294.1 AT5g06970/MOJ9_14 {... 290 1e-78
TC88771 similar to GP|3643603|gb|AAC42250.1| unknown protein {Ar... 90 3e-18
TC78908 similar to GP|19699369|gb|AAL91294.1 AT5g06970/MOJ9_14 {... 43 3e-04
TC89597 homologue to GP|17473753|gb|AAL38317.1 unknown protein {... 40 0.003
TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 38 0.010
TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ... 38 0.013
TC89538 weakly similar to GP|21689895|gb|AAM67508.1 unknown prot... 37 0.018
TC87527 similar to GP|21689681|gb|AAM67462.1 unknown protein {Ar... 37 0.030
TC87476 homologue to PIR|T11622|T11622 extensin class 1 precurso... 35 0.087
TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 35 0.087
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 35 0.087
TC87542 weakly similar to GP|22136436|gb|AAM91296.1 putative pro... 35 0.087
TC91356 similar to GP|20151585|gb|AAM11152.1 LD24077p {Drosophil... 35 0.087
AL372685 weakly similar to GP|4033606|dbj Extensin {Adiantum cap... 35 0.11
TC89335 similar to PIR|T07623|T07623 extensin homolog HRGP2 - so... 35 0.11
TC76445 similar to PIR|T07623|T07623 extensin homolog HRGP2 - so... 35 0.11
TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glyco... 35 0.11
TC82303 weakly similar to GP|18073451|emb|CAC83345. GAS-2 homolo... 34 0.15
AW697076 similar to GP|16226661|gb| At2g28910/F8N16.20 {Arabidop... 34 0.15
AW690697 similar to GP|4580471|gb|A unknown protein {Arabidopsis... 34 0.15
>TC83388 similar to GP|19699369|gb|AAL91294.1 AT5g06970/MOJ9_14 {Arabidopsis
thaliana}, partial (12%)
Length = 444
Score = 290 bits (742), Expect = 1e-78
Identities = 142/145 (97%), Positives = 144/145 (98%)
Frame = +3
Query: 347 VNHPVVGFGESGRKTNEMRILLAKIEESEFLPSSSGELQRTECLRSLREIAIPLAERPAR 406
VNHPVVGFGESGRKTNEMRILLAKIEESEFLPSSSGELQRTECLRSLREIAIPLAERPAR
Sbjct: 9 VNHPVVGFGESGRKTNEMRILLAKIEESEFLPSSSGELQRTECLRSLREIAIPLAERPAR 188
Query: 407 GDLTGEICHWADGYQFNVRLYEKLLLSVFDMLDEGKLTEEVEEILELLKSTWRVLGITET 466
GDLTGEICHWA+GYQFNVRLYEKLLLSVFDMLDEGKLT+E EEILELLKSTWRVLGITET
Sbjct: 189 GDLTGEICHWAEGYQFNVRLYEKLLLSVFDMLDEGKLTQEGEEILELLKSTWRVLGITET 368
Query: 467 IHHTCYAWVLFRQYVITREHRILLH 491
IHHTCYAWVLFRQYVITREHRILLH
Sbjct: 369 IHHTCYAWVLFRQYVITREHRILLH 443
>TC88771 similar to GP|3643603|gb|AAC42250.1| unknown protein {Arabidopsis
thaliana}, partial (33%)
Length = 1295
Score = 89.7 bits (221), Expect = 3e-18
Identities = 53/148 (35%), Positives = 81/148 (53%), Gaps = 1/148 (0%)
Frame = +3
Query: 417 ADGYQFNVRLYEKLLLSVFDMLDEGKLTEEVEEILELLKSTWRVLGITETIHHTCYAWVL 476
ADG N+R+YE LL S FD+ DE + E+ +E++E +K TW +LG+ +T H+ C+ WVL
Sbjct: 888 ADGIPLNLRIYEMLLQSCFDVNDESSIIEDFDELMEQIKKTWGILGLNQTYHNLCFTWVL 1067
Query: 477 FRQYVITREHRILLHALEQLNKIPLMEQRGQQERLHLKSLRSKVEGERDMSFLQAFLTPI 536
F ++V T + + L L + GQ + K ++ + E L + LT I
Sbjct: 1068 FHRFVATGQMDLEL----------LSDADGQLAEV-AKDAKTTKDSEYS-KILSSTLTSI 1211
Query: 537 QRWADKQLGDYHLHFSEGSA-IMEKIVA 563
WA+K+L YH F G+ ME IV+
Sbjct: 1212 LGWAEKRLLAYHETFDRGNVETMEGIVS 1295
Score = 86.7 bits (213), Expect = 3e-17
Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 40/256 (15%)
Frame = +1
Query: 153 SRSESLYSAQERELTVDDIEDFEDDDDTSMVEGLRAKRTLNDASDLAVKLPPFSTGITDD 212
S S S+ + R+L++ + D T L+ A DL L ST ++++
Sbjct: 76 SSSSSMAAQLFRDLSLGHSK--RRDSTTPSPPSLKIMPPPPTADDLPSPLGQLSTNLSNE 249
Query: 213 DLRETAYEILLACAGATGGLIVPSK---------EKKKDRKSSSLIRKLGRSKTGSIVSQ 263
L TAYEI +A + G + S D + + + RS T + S+
Sbjct: 250 YLTLTAYEIFVAACRTSSGKPLSSSIANSSSNNNNSHSDSPNQNSPLAIQRSLTSTAASK 429
Query: 264 SQNAPGL-------------------------------VGLLESMRVQLEISEAMDIRTK 292
+ A GL + + E MR Q+ +SEAMD R +
Sbjct: 430 VKKAFGLKSPGSGSKKSPGSGSGSASASGSGQGKLKRPLTVGELMRNQMRVSEAMDSRVR 609
Query: 293 QGLLNALVGKAGKRMDTLLVPLELLCCVARTEFSDKKAFIRWQKRQLKVLEEGLVNHPVV 352
+ LL G+ G+R+++++VPLEL+ + ++F+D++ + WQKR LKVLE GL+ HP +
Sbjct: 610 RALLRISAGQVGRRIESVVVPLELMQQLKASDFTDQQEYNEWQKRTLKVLEAGLILHPYI 789
Query: 353 GFGESGRKTNEMRILL 368
+S +R ++
Sbjct: 790 PLDKSNSAAQRLRQII 837
>TC78908 similar to GP|19699369|gb|AAL91294.1 AT5g06970/MOJ9_14 {Arabidopsis
thaliana}, partial (27%)
Length = 1160
Score = 43.1 bits (100), Expect = 3e-04
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 586 SDRDQIEVYITSSIKHAFTR 605
SDRDQIEVYITSSIKHAFTR
Sbjct: 3 SDRDQIEVYITSSIKHAFTR 62
>TC89597 homologue to GP|17473753|gb|AAL38317.1 unknown protein {Arabidopsis
thaliana}, partial (10%)
Length = 1061
Score = 40.0 bits (92), Expect = 0.003
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = +1
Query: 109 VTDPESSG---SPPKRAPPPVPISAVPPIAVSTPPPAYPTSPVASNISRSESLYSAQERE 165
+ P S+G PP+ PPP+P A+PP PPP + S +S SL +
Sbjct: 322 LVQPSSNGIPAPPPRTTPPPLPKRAMPP---PLPPPKFYDSIEVKVQDKSNSLRKTKSDA 492
Query: 166 L--TVDDIEDFEDDDDTSMVEGLRAKRTLNDASDLAVKLP 203
+ T+ + ++ DDDD ++ A+ A + + P
Sbjct: 493 IPDTLVKLMEYGDDDDDDDLDDSNAEMPPRTAQAIGAQKP 612
>TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (19%)
Length = 555
Score = 38.1 bits (87), Expect = 0.010
Identities = 20/41 (48%), Positives = 21/41 (50%), Gaps = 5/41 (12%)
Frame = +1
Query: 112 PESSGSPPKRAPPPVPISAVPPIAVS-----TPPPAYPTSP 147
P S GSPP AP P PI PP S +PPPA P P
Sbjct: 256 PPSPGSPPAPAPAPPPIPPSPPAPPSPGSPPSPPPASPAPP 378
Score = 37.0 bits (84), Expect = 0.023
Identities = 22/42 (52%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = +1
Query: 112 PESSGSPPKR-APP-----PVPISAVPPIAVSTPPPAYPTSP 147
P S GSPPK APP P P A PPI S P P P SP
Sbjct: 220 PPSPGSPPKPPAPPSPGSPPAPAPAPPPIPPSPPAPPSPGSP 345
Score = 28.9 bits (63), Expect = 6.2
Identities = 14/37 (37%), Positives = 16/37 (42%)
Frame = +1
Query: 112 PESSGSPPKRAPPPVPISAVPPIAVSTPPPAYPTSPV 148
P S +PP PP P A P TPP P P+
Sbjct: 307 PPSPPAPPSPGSPPSPPPASPAPPKPTPPKGSPLLPM 417
>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
partial (97%)
Length = 1049
Score = 37.7 bits (86), Expect = 0.013
Identities = 18/43 (41%), Positives = 25/43 (57%), Gaps = 5/43 (11%)
Frame = +3
Query: 110 TDPESSGSPPKRAPPPV-----PISAVPPIAVSTPPPAYPTSP 147
T P++S P + +PPPV P+ + PP A STPPP + P
Sbjct: 303 TTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPP 431
Score = 36.2 bits (82), Expect = 0.039
Identities = 18/37 (48%), Positives = 23/37 (61%), Gaps = 2/37 (5%)
Frame = +3
Query: 110 TDPESSGSPP--KRAPPPVPISAVPPIAVSTPPPAYP 144
T P SPP +++PPP P++ PP STPPPA P
Sbjct: 402 TPPPVQSSPPPVQQSPPPTPLT--PPPVQSTPPPASP 506
Score = 34.3 bits (77), Expect = 0.15
Identities = 18/43 (41%), Positives = 21/43 (47%), Gaps = 5/43 (11%)
Frame = +3
Query: 113 ESSGSPPKRAPPPV-----PISAVPPIAVSTPPPAYPTSPVAS 150
+SS P + PPPV P+ PP TPPP T P AS
Sbjct: 375 QSSPPPAQSTPPPVQSSPPPVQQSPPPTPLTPPPVQSTPPPAS 503
Score = 33.5 bits (75), Expect = 0.25
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +3
Query: 117 SPPKRAPPPV-PISAVPPIAV---STPPPAYPTSPVAS 150
SPP +PPP P A PP A +TPPPA +P++S
Sbjct: 501 SPPPASPPPFSPPPATPPPATPPPATPPPALTPTPLSS 614
Score = 32.0 bits (71), Expect = 0.74
Identities = 18/51 (35%), Positives = 24/51 (46%), Gaps = 9/51 (17%)
Frame = +3
Query: 110 TDPESSGSPPK---RAPP------PVPISAVPPIAVSTPPPAYPTSPVASN 151
T P SS +PP PP P P+ + PP S+PPP + P A +
Sbjct: 249 TSPNSSPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQS 401
Score = 31.6 bits (70), Expect = 0.96
Identities = 14/36 (38%), Positives = 19/36 (51%)
Frame = +3
Query: 112 PESSGSPPKRAPPPVPISAVPPIAVSTPPPAYPTSP 147
P S PP ++ PP P + PP S+PPP + P
Sbjct: 348 PVQSSPPPLQSSPP-PAQSTPPPVQSSPPPVQQSPP 452
Score = 30.8 bits (68), Expect = 1.6
Identities = 15/47 (31%), Positives = 22/47 (45%)
Frame = +3
Query: 112 PESSGSPPKRAPPPVPISAVPPIAVSTPPPAYPTSPVASNISRSESL 158
P + PP PP P A+ P +S+PP P A S++ +L
Sbjct: 534 PPPATPPPATPPPATPPPALTPTPLSSPPATTPAPAPAKLKSKAPAL 674
Score = 30.8 bits (68), Expect = 1.6
Identities = 14/36 (38%), Positives = 19/36 (51%)
Frame = +3
Query: 112 PESSGSPPKRAPPPVPISAVPPIAVSTPPPAYPTSP 147
P S PP ++ PP P+ + PP +PPP T P
Sbjct: 369 PLQSSPPPAQSTPP-PVQSSPPPVQQSPPPTPLTPP 473
>TC89538 weakly similar to GP|21689895|gb|AAM67508.1 unknown protein
{Arabidopsis thaliana}, partial (37%)
Length = 990
Score = 37.4 bits (85), Expect = 0.018
Identities = 19/40 (47%), Positives = 22/40 (54%), Gaps = 1/40 (2%)
Frame = +3
Query: 112 PESSGSPPKRAP-PPVPISAVPPIAVSTPPPAYPTSPVAS 150
P + PP P PP P SA PP + +TPPP P S AS
Sbjct: 210 PATPHPPPSATPSPPPPSSATPPPSSATPPPPPPFSSTAS 329
Score = 31.2 bits (69), Expect = 1.3
Identities = 15/44 (34%), Positives = 22/44 (49%)
Frame = +3
Query: 114 SSGSPPKRAPPPVPISAVPPIAVSTPPPAYPTSPVASNISRSES 157
S+ +P PPP + PP + +TPPP+ T P S + S
Sbjct: 198 STAAPATPHPPPSATPSPPPPSSATPPPSSATPPPPPPFSSTAS 329
>TC87527 similar to GP|21689681|gb|AAM67462.1 unknown protein {Arabidopsis
thaliana}, partial (96%)
Length = 1582
Score = 36.6 bits (83), Expect = 0.030
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -3
Query: 117 SPPKRAPPPVPISAVPPIAVSTPPPAYPTSPVAS 150
S P +PP PI VPP+ V PPP+YP P +S
Sbjct: 944 SSPALSPPAPPID-VPPLVVPPPPPSYPPLPPSS 846
>TC87476 homologue to PIR|T11622|T11622 extensin class 1 precursor - cowpea,
partial (48%)
Length = 939
Score = 35.0 bits (79), Expect = 0.087
Identities = 17/46 (36%), Positives = 23/46 (49%), Gaps = 4/46 (8%)
Frame = +3
Query: 106 FYLVTDPESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
+Y + P S SPP ++PPP S PP +PPP P+ P
Sbjct: 540 YYYKSPPPPSPSPPPPYGYKSPPPPSPSPPPPYIYKSPPPPSPSPP 677
Score = 33.5 bits (75), Expect = 0.25
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 112 PESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
P S SPP ++PPP S PP +PPP P+ P
Sbjct: 510 PPPSASPPPPYYYKSPPPPSPSPPPPYGYKSPPPPSPSPP 629
Score = 32.7 bits (73), Expect = 0.43
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +2
Query: 112 PESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
P S SPP ++PPP S PP +PPP P+ P
Sbjct: 29 PPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPP 148
Score = 32.7 bits (73), Expect = 0.43
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +2
Query: 112 PESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
P S SPP ++PPP S PP +PPP P+ P
Sbjct: 77 PPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPTPSPP 196
Score = 32.7 bits (73), Expect = 0.43
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 112 PESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
P S SPP ++PPP S PP +PPP P+ P
Sbjct: 462 PPPSPSPPPPYVYKSPPPPSASPPPPYYYKSPPPPSPSPP 581
Score = 32.7 bits (73), Expect = 0.43
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +2
Query: 112 PESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
P S SPP ++PPP S PP +PPP P+ P
Sbjct: 221 PPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPP 340
Score = 32.7 bits (73), Expect = 0.43
Identities = 18/41 (43%), Positives = 20/41 (47%), Gaps = 5/41 (12%)
Frame = +2
Query: 112 PESSGSPP-----KRAPPPVPISAVPPIAVSTPPPAYPTSP 147
P S SPP K PPP P S PP +PPP P+ P
Sbjct: 125 PPPSPSPPPPYVYKSPPPPTP-SPPPPYIYKSPPPPSPSPP 244
Score = 32.0 bits (71), Expect = 0.74
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 112 PESSGSPPK---RAPPPVPISAVPPIAVSTPPPAYPTSP 147
P S PP ++PPP S PP +PPP P+ P
Sbjct: 369 PPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPP 485
Score = 31.6 bits (70), Expect = 0.96
Identities = 15/40 (37%), Positives = 20/40 (49%), Gaps = 4/40 (10%)
Frame = +2
Query: 112 PESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
P + SPP ++PPP S PP +PPP P+ P
Sbjct: 173 PPPTPSPPPPYIYKSPPPPSPSPPPPYVYKSPPPPSPSPP 292
Score = 30.8 bits (68), Expect = 1.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 115 SGSPPKRAPPPVPI-SAVPPIAVSTPPPAYPTSP 147
S PP +PPP + + PP + S PPP Y SP
Sbjct: 456 SPPPPSPSPPPPYVYKSPPPPSASPPPPYYYKSP 557
Score = 30.0 bits (66), Expect = 2.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = +3
Query: 115 SGSPPKRAPPPVPISAVPPIAVSTPPPAY----PTSPVAS 150
S PP +PPP + PP +PPP Y P P AS
Sbjct: 408 SPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSAS 527
Score = 29.6 bits (65), Expect = 3.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 115 SGSPPKRAPPPVPISAVPPIAVSTPPPAY 143
S PP +PPP + PP +PPP Y
Sbjct: 119 SPPPPSPSPPPPYVYKSPPPPTPSPPPPY 205
Score = 29.6 bits (65), Expect = 3.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 115 SGSPPKRAPPPVPISAVPPIAVSTPPPAYP 144
S PP +PPP I PP +PPP +P
Sbjct: 600 SPPPPSPSPPPPYIYKSPPPPSPSPPPYHP 689
Score = 29.3 bits (64), Expect = 4.8
Identities = 11/27 (40%), Positives = 15/27 (54%)
Frame = +2
Query: 121 RAPPPVPISAVPPIAVSTPPPAYPTSP 147
++PPP S PP +PPP P+ P
Sbjct: 20 KSPPPPSPSPPPPYVYKSPPPPSPSPP 100
Score = 28.9 bits (63), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 115 SGSPPKRAPPPVPISAVPPIAVSTPPPAY 143
S PP +PPP + PP +PPP Y
Sbjct: 263 SPPPPSPSPPPPYVYKSPPPPSPSPPPPY 349
Score = 28.9 bits (63), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 115 SGSPPKRAPPPVPISAVPPIAVSTPPPAY 143
S PP +PPP + PP +PPP Y
Sbjct: 215 SPPPPSPSPPPPYVYKSPPPPSPSPPPPY 301
Score = 28.9 bits (63), Expect = 6.2
Identities = 13/29 (44%), Positives = 15/29 (50%)
Frame = +2
Query: 115 SGSPPKRAPPPVPISAVPPIAVSTPPPAY 143
S PP +PPP I PP +PPP Y
Sbjct: 167 SPPPPTPSPPPPYIYKSPPPPSPSPPPPY 253
Score = 28.9 bits (63), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 115 SGSPPKRAPPPVPISAVPPIAVSTPPPAY 143
S PP +PPP + PP +PPP Y
Sbjct: 71 SPPPPSPSPPPPYVYKSPPPPSPSPPPPY 157
Score = 28.9 bits (63), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 115 SGSPPKRAPPPVPISAVPPIAVSTPPPAY 143
S PP +PPP + PP +PPP Y
Sbjct: 23 SPPPPSPSPPPPYVYKSPPPPSPSPPPPY 109
>TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (15%)
Length = 984
Score = 35.0 bits (79), Expect = 0.087
Identities = 19/41 (46%), Positives = 23/41 (55%), Gaps = 1/41 (2%)
Frame = +1
Query: 108 LVTDPESSGSPPKRAPP-PVPISAVPPIAVSTPPPAYPTSP 147
L T P + SPP R+PP P P S PP + +PP P SP
Sbjct: 328 LTTSPSPTASPPPRSPPRPPPRS--PPRQLMSPPRPLPRSP 444
Score = 29.6 bits (65), Expect = 3.7
Identities = 20/56 (35%), Positives = 25/56 (43%), Gaps = 14/56 (25%)
Frame = +1
Query: 112 PESSGSPPKRAPP--------PVPISAVPP------IAVSTPPPAYPTSPVASNIS 153
P S PP R+PP P+P S PP ++ +TP P P SP S S
Sbjct: 364 PRSPPRPPPRSPPRQLMSPPRPLPRSPSPPPRNPPELSRTTPTPRPPMSPSPSPTS 531
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 35.0 bits (79), Expect = 0.087
Identities = 20/47 (42%), Positives = 25/47 (52%), Gaps = 3/47 (6%)
Frame = +2
Query: 118 PPKRAPPPVPISAVPPIAVSTPPPAY---PTSPVASNISRSESLYSA 161
PP +PPP P+ A P S PPP Y P SPV + S +YS+
Sbjct: 380 PPSPSPPPSPVYAYP----SPPPPVYTSPPPSPVYAYPSPPPPVYSS 508
Score = 33.5 bits (75), Expect = 0.25
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 2/38 (5%)
Frame = +2
Query: 112 PESSGSPPKRAPPPVPISAVPPI--AVSTPPPAYPTSP 147
P S PP +PPP P S PP+ +S PPP SP
Sbjct: 134 PAHSPPPPPXSPPPPPHSPTPPVYPYLSPPPPPPVHSP 247
Score = 31.2 bits (69), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (50%), Gaps = 4/37 (10%)
Frame = +2
Query: 112 PESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYP 144
P S +PP PPP P+ + PP S PPP+ P
Sbjct: 176 PPHSPTPPVYPYLSPPPPPPVHSPPPPVYSPPPPSPP 286
Score = 31.2 bits (69), Expect = 1.3
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 122 APPPVPISAVPPIAVSTPPPAY-PTSPVASNIS 153
+PPP P + PP S PPP + PT PV +S
Sbjct: 119 SPPPPPAHSPPPPPXSPPPPPHSPTPPVYPYLS 217
Score = 30.8 bits (68), Expect = 1.6
Identities = 14/27 (51%), Positives = 15/27 (54%)
Frame = +2
Query: 118 PPKRAPPPVPISAVPPIAVSTPPPAYP 144
PP +PPP P S PP S PP YP
Sbjct: 131 PPAHSPPPPPXSPPPP-PHSPTPPVYP 208
Score = 30.0 bits (66), Expect = 2.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 118 PPKRAPPPVPISAVPPIAVSTPPPAYP 144
PP +PPP P PP V +PPP P
Sbjct: 38 PPPNSPPPPP----PPAPVFSPPPPVP 106
Score = 29.3 bits (64), Expect = 4.8
Identities = 14/30 (46%), Positives = 16/30 (52%), Gaps = 2/30 (6%)
Frame = +2
Query: 117 SPPKRAPPPV--PISAVPPIAVSTPPPAYP 144
SPP +PPP P PP V PPP+ P
Sbjct: 263 SPPPPSPPPCVEPPPPPPPPCVEPPPPSSP 352
Score = 28.5 bits (62), Expect = 8.1
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 112 PESSGSPPKRAPPPVPISAVP---PIAVSTPPPAYPTSP 147
P +S PP PPP P+ + P P S+PPP SP
Sbjct: 41 PPNSPPPP---PPPAPVFSPPPPVPYYYSSPPPPPAHSP 148
>TC87542 weakly similar to GP|22136436|gb|AAM91296.1 putative protein
{Arabidopsis thaliana}, partial (39%)
Length = 2234
Score = 35.0 bits (79), Expect = 0.087
Identities = 26/86 (30%), Positives = 39/86 (45%)
Frame = +2
Query: 111 DPESSGSPPKRAPPPVPISAVPPIAVSTPPPAYPTSPVASNISRSESLYSAQERELTVDD 170
D + P PPP P +P VST P+S VA +S S + + R+ + D+
Sbjct: 371 DVDLDVDPSPSPPPPPPPPHIPDSLVST-VTQQPSSDVAPAVSVSATELKNESRDASNDE 547
Query: 171 IEDFEDDDDTSMVEGLRAKRTLNDAS 196
E F +T + A++ LN AS
Sbjct: 548 EETFRKIRETIHEKLSHARQLLNSAS 625
>TC91356 similar to GP|20151585|gb|AAM11152.1 LD24077p {Drosophila
melanogaster}, partial (71%)
Length = 698
Score = 35.0 bits (79), Expect = 0.087
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 94 LPQMSDTGSVGEFYLVTDPESSGSPPKRAPPPVPISAVPPIAVSTPPPAYPTS--PVASN 151
LP +S + + F T +S SP PP SAVP + S+PPPA P S P S+
Sbjct: 471 LPSLSPSLASFPFVSATGVPTSVSPTP-CPPRSLASAVPSPSASSPPPAVPVSSPPPPSS 647
Query: 152 ISRS 155
+S S
Sbjct: 648 VSSS 659
>AL372685 weakly similar to GP|4033606|dbj Extensin {Adiantum
capillus-veneris}, partial (49%)
Length = 407
Score = 34.7 bits (78), Expect = 0.11
Identities = 17/46 (36%), Positives = 23/46 (49%), Gaps = 4/46 (8%)
Frame = +2
Query: 106 FYLVTDPESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
+Y + P S SPP ++PPP S PP +PPP P+ P
Sbjct: 251 YYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPP 388
Score = 29.3 bits (64), Expect = 4.8
Identities = 15/38 (39%), Positives = 19/38 (49%)
Frame = +2
Query: 106 FYLVTDPESSGSPPKRAPPPVPISAVPPIAVSTPPPAY 143
+Y + P S SPP PP + PP + S PPP Y
Sbjct: 299 YYYKSPPPPSPSPP----PPYYYKSPPPPSPSPPPPYY 400
>TC89335 similar to PIR|T07623|T07623 extensin homolog HRGP2 - soybean
(fragment), partial (45%)
Length = 644
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/47 (40%), Positives = 24/47 (50%), Gaps = 5/47 (10%)
Frame = +1
Query: 106 FYLVTDPESSGSPP-----KRAPPPVPISAVPPIAVSTPPPAYPTSP 147
+Y + P S SPP + PPP PIS PP +PPP P+ P
Sbjct: 4 YYYKSPPPPSPSPPPPYHYQSPPPPSPISH-PPYYYKSPPPPSPSPP 141
>TC76445 similar to PIR|T07623|T07623 extensin homolog HRGP2 - soybean
(fragment), partial (76%)
Length = 821
Score = 34.7 bits (78), Expect = 0.11
Identities = 17/46 (36%), Positives = 23/46 (49%), Gaps = 4/46 (8%)
Frame = +2
Query: 106 FYLVTDPESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
+Y + P S SPP ++PPP S PP +PPP P+ P
Sbjct: 68 YYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPP 205
Score = 33.9 bits (76), Expect = 0.19
Identities = 19/47 (40%), Positives = 24/47 (50%), Gaps = 5/47 (10%)
Frame = +2
Query: 106 FYLVTDPESSGSPP-----KRAPPPVPISAVPPIAVSTPPPAYPTSP 147
+Y + P S SPP + PPP PIS PP +PPP P+ P
Sbjct: 164 YYYKSPPPPSPSPPPPYHYQSPPPPSPISH-PPNYYKSPPPPSPSPP 301
Score = 32.0 bits (71), Expect = 0.74
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 106 FYLVTDPESSGSPPKRAPPPVPISAVPPIAVSTPPP-AYPTSPVASNISRSESLYSA 161
+Y + P S SPP PP + PP + S PPP Y + P S IS + Y +
Sbjct: 116 YYYKSPPPPSPSPP----PPYYYKSPPPPSPSPPPPYHYQSPPPPSPISHPPNYYKS 274
Score = 30.0 bits (66), Expect = 2.8
Identities = 18/47 (38%), Positives = 24/47 (50%), Gaps = 5/47 (10%)
Frame = +2
Query: 106 FYLVTDPESSGSPPK----RAPPPVPI-SAVPPIAVSTPPPAYPTSP 147
+Y + P S SPP ++PPP P S PP +PPP P+ P
Sbjct: 20 YYYKSPPPPSPSPPSPYYYKSPPP-PSPSPPPPYYYKSPPPPSPSPP 157
Score = 29.6 bits (65), Expect = 3.7
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 107 YLVTDPESSGSPPKRAPPPVPISAVPPIAVSTPPPAY 143
Y + P S SPP PP + PP S PPPAY
Sbjct: 263 YYKSPPPPSPSPP----PPYHYVSPPPPVKSPPPPAY 361
>TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glycoprotein
(clone Hyp2.13) - kidney bean (fragment), partial (32%)
Length = 777
Score = 34.7 bits (78), Expect = 0.11
Identities = 17/46 (36%), Positives = 23/46 (49%), Gaps = 4/46 (8%)
Frame = +1
Query: 106 FYLVTDPESSGSPPK----RAPPPVPISAVPPIAVSTPPPAYPTSP 147
+Y + P S SPP ++PPP S PP +PPP P+ P
Sbjct: 43 YYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPP 180
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/47 (40%), Positives = 24/47 (50%), Gaps = 5/47 (10%)
Frame = +1
Query: 106 FYLVTDPESSGSPP-----KRAPPPVPISAVPPIAVSTPPPAYPTSP 147
+Y + P S SPP + PPP PIS PP +PPP P+ P
Sbjct: 139 YYYKSPPPPSPSPPPPYHYQSPPPPSPISH-PPYYYKSPPPPSPSPP 276
Score = 30.8 bits (68), Expect = 1.6
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 106 FYLVTDPESSGSPPKRAPPPVPISAVPPIAVSTPPP-AYPTSPVASNISRSESLYSA 161
+Y + P S SPP PP + PP + S PPP Y + P S IS Y +
Sbjct: 91 YYYKSPPPPSPSPP----PPYYYKSPPPPSPSPPPPYHYQSPPPPSPISHPPYYYKS 249
Score = 29.6 bits (65), Expect = 3.7
Identities = 15/34 (44%), Positives = 17/34 (49%), Gaps = 2/34 (5%)
Frame = +1
Query: 116 GSPPKRAPPPVPI--SAVPPIAVSTPPPAYPTSP 147
G PP PP P + PP + S PPP Y SP
Sbjct: 7 GPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP 108
Score = 29.3 bits (64), Expect = 4.8
Identities = 15/38 (39%), Positives = 18/38 (46%)
Frame = +1
Query: 106 FYLVTDPESSGSPPKRAPPPVPISAVPPIAVSTPPPAY 143
+Y + P S SPP PP + PP S PPP Y
Sbjct: 235 YYYKSPPPPSPSPP----PPYHYVSPPPPVKSPPPPTY 336
>TC82303 weakly similar to GP|18073451|emb|CAC83345. GAS-2 homologue
{Candida glabrata}, partial (7%)
Length = 846
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/43 (46%), Positives = 26/43 (59%), Gaps = 2/43 (4%)
Frame = +1
Query: 118 PPKRAPPPVPISAVPPIAVSTPPPAYPTSP--VASNISRSESL 158
PP + PP P VPP+ ++ PPA P +P VAS+ SRS L
Sbjct: 337 PPTASLPPPP---VPPMPLAALPPALPATPLLVASSPSRSSPL 456
Score = 33.5 bits (75), Expect = 0.25
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Frame = +1
Query: 112 PESSGSPPKRAPPPV-----PISA-VPPIAVSTPPPAYPTSPVAS 150
P +S + P+ APPP P+S +PP S PPP P P+A+
Sbjct: 256 PVTSTARPRPAPPPATALASPLSPPLPPPTASLPPPPVPPMPLAA 390
>AW697076 similar to GP|16226661|gb| At2g28910/F8N16.20 {Arabidopsis
thaliana}, partial (21%)
Length = 783
Score = 34.3 bits (77), Expect = 0.15
Identities = 13/30 (43%), Positives = 18/30 (59%)
Frame = -1
Query: 118 PPKRAPPPVPISAVPPIAVSTPPPAYPTSP 147
PP +P P P++AVP + PPP +P P
Sbjct: 501 PPDHSPSPHPLTAVPRPSTHPPPPWFPAPP 412
>AW690697 similar to GP|4580471|gb|A unknown protein {Arabidopsis thaliana},
partial (6%)
Length = 323
Score = 34.3 bits (77), Expect = 0.15
Identities = 23/69 (33%), Positives = 36/69 (51%), Gaps = 1/69 (1%)
Frame = +1
Query: 203 PPFSTGITDDDLRETAYEILLACAGATGGL-IVPSKEKKKDRKSSSLIRKLGRSKTGSIV 261
PP + + +LRETAYEILLA ++G + + ++ K + L RS+T
Sbjct: 58 PP--SNLPSSELRETAYEILLAACRSSGPKPLTFISQSERGNKDPAPAASLHRSRTSMAA 231
Query: 262 SQSQNAPGL 270
S+ + A GL
Sbjct: 232 SKVKKALGL 258
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,354,282
Number of Sequences: 36976
Number of extensions: 263668
Number of successful extensions: 5644
Number of sequences better than 10.0: 222
Number of HSP's better than 10.0 without gapping: 2933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4481
length of query: 629
length of database: 9,014,727
effective HSP length: 102
effective length of query: 527
effective length of database: 5,243,175
effective search space: 2763153225
effective search space used: 2763153225
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC149307.14