BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149305.8 - phase: 0 /pseudo
(439 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AW688560 similar to PIR|T51529|T515 hypothetical protein T20K14_... 73 2e-13
TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-inf... 45 6e-05
TC88253 weakly similar to GP|15810597|gb|AAL07186.1 unknown prot... 35 0.075
TC90087 similar to PIR|T05841|T05841 spliceosome-associated prot... 33 0.22
BI310236 similar to SP|Q9UZC8|RA50_ DNA double-strand break repa... 33 0.28
TC87518 weakly similar to PIR|E96714|E96714 probable DNA-binding... 32 0.37
TC86635 weakly similar to GP|9758600|dbj|BAB09233.1 gene_id:MDF2... 32 0.49
TC79991 similar to GP|10177307|dbj|BAB10568. contains similarity... 32 0.49
BG645968 weakly similar to GP|21592390|gb| unknown {Arabidopsis ... 32 0.63
TC89176 homologue to GP|13539605|emb|CAC35733. cyclophilin-RNA i... 32 0.63
TC86622 weakly similar to GP|20197623|gb|AAM15156.1 putative myo... 32 0.63
TC82804 similar to GP|20385491|gb|AAM21312.1 EMB514 {Arabidopsis... 32 0.63
TC80941 weakly similar to PIR|T39903|T39903 serine-rich protein ... 31 0.67
TC78429 similar to GP|16604607|gb|AAL24096.1 putative AtBgamma p... 31 0.83
AJ388952 similar to PIR|T04526|T045 hypothetical protein F16A16.... 31 0.83
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 31 0.83
TC76965 weakly similar to GP|2598589|emb|CAA75589.1 MtN19 {Medic... 31 0.83
TC83423 similar to GP|12081942|dbj|BAB20681. nucleotide pyrophos... 31 1.1
TC78908 similar to GP|19699369|gb|AAL91294.1 AT5g06970/MOJ9_14 {... 31 1.1
TC82389 similar to PIR|T45912|T45912 hypothetical protein F5K20.... 30 1.4
>AW688560 similar to PIR|T51529|T515 hypothetical protein T20K14_120 -
Arabidopsis thaliana, partial (8%)
Length = 601
Score = 72.8 bits (177), Expect = 2e-13
Identities = 59/182 (32%), Positives = 86/182 (46%), Gaps = 8/182 (4%)
Frame = +3
Query: 5 KKKPLEIENLNPNEFSNRTPLQKSLTKGDNNCVNVVVVSPQKRIRQRKFVVAKKKKNDQS 64
++ P EN+NPN +KS K N N SPQ +IR+RKFVV KKK +
Sbjct: 123 QQTPKHTENVNPNTPPPSCSAKKS-QKPKNPNPNPNPNSPQTKIRRRKFVVVGKKKQKED 299
Query: 65 PRK--------TVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGE 116
++ + C C E + KCVC AYRNLR+SQE FF +N D +E+ +E +
Sbjct: 300 VKEGGDDGDSGVLNCNCKEKN--RKCVCVAYRNLRKSQEEFF--KNRVDEDEEEEEHE-- 461
Query: 117 NVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPE 176
EE+ E + ++ VE++ E +VKR ++ EE V +
Sbjct: 462 ---EEIPEIDNVV---------------VEKQKEGDVGLGLIVKRSXXRLREEVXEXVTQ 587
Query: 177 NG 178
G
Sbjct: 588 IG 593
>TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-infected
erythrocyte surface antigen {Plasmodium falciparum},
partial (2%)
Length = 2007
Score = 45.1 bits (105), Expect = 6e-05
Identities = 32/113 (28%), Positives = 55/113 (48%)
Frame = +1
Query: 99 EKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSM 158
E+++ + EE DEEK + EE+ + I + NEE K +EE ++ENEE
Sbjct: 109 EEKSHLENEENKDEEKSKQENEEIKDGEKIQQE--NEENK--DEEKSQQENEEN---KDE 267
Query: 159 VKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNK 211
K ++E +++ E G++ +K K++NEE E + K+K
Sbjct: 268 EKSQQENELKKNEGGEKETGEITE-----------EKSKQENEETSETNSKDK 393
Score = 34.7 bits (78), Expect = 0.075
Identities = 29/122 (23%), Positives = 55/122 (44%), Gaps = 4/122 (3%)
Frame = +1
Query: 92 ESQEGFFEKENFFDGEEKN----DEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEE 147
+SQE + E FD +EKN + +K N E ++ + + GNE K ++ E
Sbjct: 637 KSQESSNKTEEQFDKKEKNEFELESQKNSNETTESTDSTITQNSQGNESEK---DQAQTE 807
Query: 148 ENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEEND 207
+ KG+ S ++++E +E N+ ++ + + + EK+ E+ N
Sbjct: 808 NDTPKGSASESDEQKQE---QEQNNTTKDD---VQTTDTSSQNGNDTTEKQNETSEDANS 969
Query: 208 KK 209
KK
Sbjct: 970 KK 975
Score = 31.6 bits (70), Expect = 0.63
Identities = 23/108 (21%), Positives = 47/108 (43%)
Frame = +1
Query: 107 EEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKV 166
E + +E GE+ E+ N + G + E E ++EEK + + EK+
Sbjct: 19 ENEESKETGESSEEKSHLENEESKETGESSEEKSHLENEENKDEEKSKQENEEIKDGEKI 198
Query: 167 MEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVMK 214
+E + E ++E E+N++EE++ ++N++ K
Sbjct: 199 QQENEENKDEE--------------KSQQENEENKDEEKSQQENELKK 300
>TC88253 weakly similar to GP|15810597|gb|AAL07186.1 unknown protein
{Arabidopsis thaliana}, partial (51%)
Length = 1122
Score = 34.7 bits (78), Expect = 0.075
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 7/165 (4%)
Frame = +3
Query: 4 EKKKPLEI-ENLNPNEFSNRTP----LQKSLTKGDNNCVNVVVVSPQKRIRQRKFV--VA 56
E+KK EI E P E + P + + + C V+ QKRIR+ K V V
Sbjct: 426 EEKKEEEIKEEPKPEEKKDEPPPVVTIVLKIRMHCDACAQVI----QKRIRKIKGVESVE 593
Query: 57 KKKKNDQSPRKTVLCKCGENDDGSKCVCEAYRNLRESQEGFFEKENFFDGEEKNDEEKGE 116
NDQ+ K V+ D +K V E ++ ++ Q +KE + EEK +EEK E
Sbjct: 594 TDLGNDQAIVKGVI-------DPTKLVDEVFKRTKK-QASIVKKEEKKE-EEKKEEEKKE 746
Query: 117 NVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKR 161
V EE E++ EEEN+ + + + +KR
Sbjct: 747 EVKEE-------------------EKKESEEENKGEDDNKTEIKR 824
Score = 30.8 bits (68), Expect = 1.1
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = +3
Query: 99 EKENFFDGEEKNDEEKGENVLEEVIEANLIIH-DIGNE--ERKIDEEEGVEEENEEKGNC 155
+KE E K +E+K E I + +H D + +++I + +GVE + GN
Sbjct: 432 KKEEEIKEEPKPEEKKDEPPPVVTIVLKIRMHCDACAQVIQKRIRKIKGVESVETDLGND 611
Query: 156 SSMVKRRRE--KVMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNEEEEENDKKNKVM 213
++VK + K+++E + + VK E KKE+EK EEE++ + K +
Sbjct: 612 QAIVKGVIDPTKLVDEVFKRTKKQASI---VKKEE-----KKEEEKKEEEKKEEVKEEEK 767
Query: 214 K 214
K
Sbjct: 768 K 770
>TC90087 similar to PIR|T05841|T05841 spliceosome-associated protein homolog
F17L22.120 - Arabidopsis thaliana, partial (12%)
Length = 733
Score = 33.1 bits (74), Expect = 0.22
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 13/164 (7%)
Frame = +2
Query: 45 QKRIRQRKFVVAKKKKNDQSPRKTVLCKCGENDDGSKCV-----------CEAYRNLRES 93
++R +Q+K A K++N + K + V E Y L E
Sbjct: 197 RRRRKQKKINKASKEQNANASEDDTDAKENTEQQQQQVVEQVEIEYVPEKAELYEGLDEE 376
Query: 94 QEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKG 153
+ FEK +F + + D +K + E I D EEE + E +EKG
Sbjct: 377 FKKIFEKFSFSEVIDSEDNDKKDESAENAITKKKADSD--------SEEEEDDNEQKEKG 532
Query: 154 NCSSMVK-RRREKVMEEARNSV-PENGKVMHLVKAFERLLSIKK 195
+ K +RR K+ E + S P+ +V A +LL K
Sbjct: 533 VSNKKKKLQRRMKIAELKQISARPDVVEVWDATSADPKLLVFLK 664
>BI310236 similar to SP|Q9UZC8|RA50_ DNA double-strand break repair rad50
ATPase. {Pyrococcus abyssi}, partial (2%)
Length = 819
Score = 32.7 bits (73), Expect = 0.28
Identities = 35/117 (29%), Positives = 49/117 (40%), Gaps = 10/117 (8%)
Frame = +2
Query: 136 ERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKK 195
++K+ E + E E++EK + VK R K E + H E S +K
Sbjct: 92 KKKLFECQVKEFESKEKHH-EVQVKERESKEREFEGQVKELESRKKHFKSQVEEFKSKEK 268
Query: 196 EKE---KNEEEEENDKKNKVMKWALPGLQFQQPVKDG-------DEQSEVVSSCCDD 242
+ E E +EN K KV + L QF+ VKD DE+ E V S DD
Sbjct: 269 QLEGRWSELESKENKFKAKVKELNLKEKQFEGLVKDPASRKKYIDEEKESVESYMDD 439
>TC87518 weakly similar to PIR|E96714|E96714 probable DNA-binding protein
T6L1.19 [imported] - Arabidopsis thaliana, partial (41%)
Length = 1337
Score = 32.3 bits (72), Expect = 0.37
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Frame = +2
Query: 89 NLRESQEGFFEKENFFDGEEKNDEEK--GENVLEEVIEANLIIHDIGNEERKIDEEEGVE 146
N S+E F+K + + +E+ ++ +++ N N K+DE +
Sbjct: 5 NFGFSRENLFKKRKMARSAKGHQDEELVDDDDDQDIFTPNTSSSINNNNNVKVDEPIRGK 184
Query: 147 EENEEKGNCSSMVKRRREKVMEE---ARNSVPEN----GKVMHLVKAFERLLSIKKEKEK 199
N + S +RRR K+ E R+ +PEN K L++ E + ++++ +
Sbjct: 185 RANPHRSKHSETEQRRRSKINERFQALRDLIPENDSKRDKASFLLEVIEYIHFLQEKLQI 364
Query: 200 NEEEEE--NDKKNKVMKW 215
E E N + K++ W
Sbjct: 365 YEHPYEGWNQEPTKLIPW 418
>TC86635 weakly similar to GP|9758600|dbj|BAB09233.1
gene_id:MDF20.10~pir||T08929~similar to unknown protein
{Arabidopsis thaliana}, partial (32%)
Length = 1963
Score = 32.0 bits (71), Expect = 0.49
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = +2
Query: 99 EKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSM 158
EK + EE +D EK E EE E G+E+ K + E EEE +E S
Sbjct: 26 EKTEVEEKEEGDDNEKSEEETEEKEE--------GDEKEKTEAETEEEEEADEDTIDKSK 181
Query: 159 VKRRREKVMEEARNSVPENGKV-MHLVKAFERLLSIKKEKEKNEEEEENDKKN 210
+ + E E + GKV VK ++ L + + K + ++K+
Sbjct: 182 EEDKAEGSKGEKGSKKRARGKVNEEKVKVKKKELKLPEPKTPTSDRPVRERKS 340
Score = 30.8 bits (68), Expect = 1.1
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +2
Query: 85 EAYRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEG 144
E + E +EG +++ + EEK + ++ E E E D ++ ++ D+ EG
Sbjct: 23 EEKTEVEEKEEGDDNEKSEEETEEKEEGDEKEKTEAETEEEEEADEDTIDKSKEEDKAEG 202
Query: 145 VEEENEEKGNCSSMVKRRREKVMEE----ARNSVPENGKVMHLVKAFERLLSI 193
+ E K V + KV ++ P + + + K+ ERL+++
Sbjct: 203 SKGEKGSKKRARGKVNEEKVKVKKKELKLPEPKTPTSDRPVRERKSVERLVAL 361
Score = 29.3 bits (64), Expect = 3.1
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +2
Query: 133 GNEERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLS 192
G ++K ++ GVE+++ S + + E+ +E N +PE + K S
Sbjct: 836 GKRQKKNEDSSGVEKKSTTDTEDESEGEEKNEENDDEPENDIPEKSEDETPQK------S 997
Query: 193 IKKEKEKNEEEEENDKKNK 211
+++K + E E+ KK K
Sbjct: 998 EREDKSDSGSESEDVKKRK 1054
>TC79991 similar to GP|10177307|dbj|BAB10568. contains similarity to zinc
finger protein~gene_id:MDC12.23 {Arabidopsis thaliana},
partial (8%)
Length = 1023
Score = 32.0 bits (71), Expect = 0.49
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 104 FDGEEKNDEEKGENVLEEVIEANLIIHDIGNEE----RKIDEEEGVEEENEE 151
FD +E+ +E+G + ++V + +G+EE K+DEEE V+ ENEE
Sbjct: 460 FDDDERVGDERGAEIEDKVSNFD-DGERVGDEESLKGEKVDEEESVKGENEE 612
Score = 30.0 bits (66), Expect = 1.8
Identities = 21/54 (38%), Positives = 26/54 (47%), Gaps = 2/54 (3%)
Frame = +1
Query: 102 NFFDGEEKNDEE--KGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKG 153
NF DGE DEE KGE V EE G E ++ EE V+ + + KG
Sbjct: 520 NFDDGERVGDEESLKGEKVDEEESVK-------GENEEFVEGEERVDVDGDSKG 660
>BG645968 weakly similar to GP|21592390|gb| unknown {Arabidopsis thaliana},
partial (18%)
Length = 814
Score = 31.6 bits (70), Expect = 0.63
Identities = 24/94 (25%), Positives = 42/94 (44%)
Frame = +2
Query: 107 EEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKV 166
E +E E L E N + ++G + +DEE+ +E+ E+ CS VK+ E
Sbjct: 137 EMDGEEHINEAPLSEA--ENNSVENLGGSD-PLDEEKNLEDGKPEEEQCSEPVKKDLEVG 307
Query: 167 MEEARNSVPENGKVMHLVKAFERLLSIKKEKEKN 200
+E + V V+A +++K E+ N
Sbjct: 308 LEVTETVLVLEEGVRETVRAENVSVTLKNEESSN 409
>TC89176 homologue to GP|13539605|emb|CAC35733. cyclophilin-RNA interacting
protein {Paramecium tetraurelia}, partial (3%)
Length = 783
Score = 31.6 bits (70), Expect = 0.63
Identities = 28/82 (34%), Positives = 41/82 (49%), Gaps = 4/82 (4%)
Frame = +2
Query: 86 AYRNLRESQEGFFEKENFFDGEEKNDEEKGENVL---EEVIEANLIIHDIGNEERKIDEE 142
A R RES +EK F D E++ +E + E + V E I + +ERK EE
Sbjct: 17 AERQRRESLRAEWEKR-FEDREKEREEREKEREKVRRQRVSEWEAIDKENEEKERKRREE 193
Query: 143 EGV-EEENEEKGNCSSMVKRRR 163
E + E E EE+ NC + ++R
Sbjct: 194 ELIRERELEERMNCRRLEWKKR 259
>TC86622 weakly similar to GP|20197623|gb|AAM15156.1 putative myosin heavy
chain {Arabidopsis thaliana}, partial (17%)
Length = 2546
Score = 31.6 bits (70), Expect = 0.63
Identities = 43/187 (22%), Positives = 78/187 (40%), Gaps = 29/187 (15%)
Frame = +3
Query: 78 DGSKCVCEAYRNLRESQEGFFEKENFFDGEEK-NDEEKGENVLEEVIEANLI-------- 128
D + E +NL++ E D EEK + +K E+ L+ +E I
Sbjct: 1365 DDRNLLNETNQNLKKELESII-----LDLEEKLKEHQKNEDSLKSEVETLKIEIAEKSAL 1529
Query: 129 ---IHDI----GNEERKIDEEEGVEEE--NEEKGNCSSMVKRRREKVME--EARNSVPEN 177
+H+I E ++ EE G + ++ + + SS + +K+ E V E
Sbjct: 1530 QSRLHEIEAQLAKAESRLHEEVGSVQAAASQREVDLSSKFEDYEQKISEINVLNGKVAEL 1709
Query: 178 GKVMHLVKAFERLLSIKKEKE---------KNEEEEENDKKNKVMKWALPGLQFQQPVKD 228
K +HL + + + + K E+ KN EE KKN++ ++F+Q ++
Sbjct: 1710 EKELHLAQ--DTIANQKGEESQKLELEAALKNSVEELETKKNEISLLQKQVIEFEQKLQQ 1883
Query: 229 GDEQSEV 235
DE+ V
Sbjct: 1884 ADEKISV 1904
>TC82804 similar to GP|20385491|gb|AAM21312.1 EMB514 {Arabidopsis thaliana},
partial (43%)
Length = 624
Score = 31.6 bits (70), Expect = 0.63
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 99 EKENFFDGEEKND-EEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEK 152
E EN + +EK EE+GE ++ D+ +++ K+DEE+ VEEE EK
Sbjct: 126 EVENVSESKEKRTREEEGEEEPKD---------DVVSKKAKVDEEKSVEEERLEK 263
>TC80941 weakly similar to PIR|T39903|T39903 serine-rich protein - fission
yeast (Schizosaccharomyces pombe), partial (15%)
Length = 557
Score = 31.2 bits (69), Expect = 0.83
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 85 EAYRNLRESQEGFFE-KENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEE 143
EA ++ E +EG E K + EE +D EK E EE E G+E+ K + E
Sbjct: 140 EAEGSIEEKEEGNDEEKTEVEEKEEGDDNEKSEEETEEKEE--------GDEKEKTEAET 295
Query: 144 GVEEENEE 151
EEE +E
Sbjct: 296 EEEEEADE 319
Score = 30.0 bits (66), Expect(2) = 0.67
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 107 EEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRR-REK 165
E+K ++EK E E+ E ++ + GN+E K + EE E ++ EK + K EK
Sbjct: 101 EDKEEKEKIE--AEKEAEGSIEEKEEGNDEEKTEVEEKEEGDDNEKSEEETEEKEEGDEK 274
Query: 166 VMEEARNSVPENGKVMHLVKAFERLLSIKKEKEKNE 201
EA E +A E + KE++K E
Sbjct: 275 EKTEAETEEEE--------EADEDTIDKSKEEDKAE 358
Score = 20.0 bits (40), Expect(2) = 0.67
Identities = 11/49 (22%), Positives = 26/49 (52%)
Frame = +3
Query: 194 KKEKEKNEEEEENDKKNKVMKWALPGLQFQQPVKDGDEQSEVVSSCCDD 242
KK + + + E+ND + + +K + ++PV+D ++ ++ DD
Sbjct: 342 KKIRPRVVKVEKNDNEVEEVKDDMEVDSVKEPVEDKNDDDDIQEMEEDD 488
>TC78429 similar to GP|16604607|gb|AAL24096.1 putative AtBgamma protein
{Arabidopsis thaliana}, partial (62%)
Length = 1596
Score = 31.2 bits (69), Expect = 0.83
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -3
Query: 137 RKIDEEEGVEEENEEKGNCSSMVKRRREKVMEE 169
RKI+EEE EEE EE G +VKR R+K +E
Sbjct: 277 RKIEEEEE-EEEEEELGFGGEVVKRERKKKRKE 182
>AJ388952 similar to PIR|T04526|T045 hypothetical protein F16A16.160 -
Arabidopsis thaliana, partial (24%)
Length = 591
Score = 31.2 bits (69), Expect = 0.83
Identities = 23/80 (28%), Positives = 37/80 (45%)
Frame = -3
Query: 136 ERKIDEEEGVEEENEEKGNCSSMVKRRREKVMEEARNSVPENGKVMHLVKAFERLLSIKK 195
E K +EEE EEE EE+G R KV ++ G+ + + +L I
Sbjct: 283 EPKEEEEEEEEEEEEEEGEGDEEEDMARGKVGARRDEALVMMGEEVEMGV*KVNILEI-- 110
Query: 196 EKEKNEEEEENDKKNKVMKW 215
E+EEE +++ ++KW
Sbjct: 109 -----EDEEEEEEERFLLKW 65
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 31.2 bits (69), Expect = 0.83
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 92 ESQEGFFEKENFFDGEEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEE 151
E EG E+E EE+ DE E EE E + +EE + +EEE EEE+++
Sbjct: 60 EEDEGEVEEEEDEHDEEEEDEHDEEEEEEEEEEEE---DEHDDEEEEEEEEEEEEEEDDD 230
Query: 152 K 152
+
Sbjct: 231 E 233
Score = 30.0 bits (66), Expect = 1.8
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +3
Query: 107 EEKNDEEKGENVLEEVIEANLIIHDIGNEERKIDEEEGVEEENEEKGNCSSMVKRRREKV 166
EE N+EE V EE E + D +EE + +EEE E+E++++ + E+
Sbjct: 45 EEHNEEEDEGEVEEEEDEHDEEEEDEHDEEEEEEEEEEEEDEHDDE-------EEEEEEE 203
Query: 167 MEEARNSVPENGK 179
EE E G+
Sbjct: 204 EEEEEEDDDEEGE 242
>TC76965 weakly similar to GP|2598589|emb|CAA75589.1 MtN19 {Medicago
truncatula}, partial (78%)
Length = 1604
Score = 31.2 bits (69), Expect = 0.83
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 251 WIGSKGFSYIFLGLWKWKK 269
W G KG+ +++ LWKWK+
Sbjct: 1070 WTGWKGYMFLYTKLWKWKR 1126
>TC83423 similar to GP|12081942|dbj|BAB20681. nucleotide
pyrophosphatase-like protein {Spinacia oleracea},
partial (53%)
Length = 1083
Score = 30.8 bits (68), Expect = 1.1
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 111 DEEKGENVLEEVIEANLIIHDIGNEERKI--DEEEGVEEENEEKGNCSSMVKRRR 163
DEE+ E E+ + + + +R + +EEEGVEEE+EE S++K RR
Sbjct: 261 DEERKRKAKENAAESEMEVMMMREMKRVLLKEEEEGVEEEDEE----FSVLKERR 109
>TC78908 similar to GP|19699369|gb|AAL91294.1 AT5g06970/MOJ9_14 {Arabidopsis
thaliana}, partial (27%)
Length = 1160
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/80 (26%), Positives = 40/80 (49%), Gaps = 1/80 (1%)
Frame = +1
Query: 83 VCEAYRNLRESQEGFFEKENFFDGEEKNDEEKG-ENVLEEVIEANLIIHDIGNEERKIDE 141
+ E YR + E+ + FF + E N +G +N L+ + NL++HD+ ++E I
Sbjct: 538 IVEVYRIVEETVDQFFGLKVPMRFTELNSMFRGIDNALQ--VYGNLVVHDLASKEDLIPP 711
Query: 142 EEGVEEENEEKGNCSSMVKR 161
+ ++E G + VK+
Sbjct: 712 VPVLTRYSKEAGLIKAFVKK 771
>TC82389 similar to PIR|T45912|T45912 hypothetical protein F5K20.20 -
Arabidopsis thaliana, partial (23%)
Length = 907
Score = 30.4 bits (67), Expect = 1.4
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = -3
Query: 71 CKCGENDDGSKCVCEA-------YRNLRESQEGFFEKENFFDGEEKNDEEKGENVLEEVI 123
C+ E+ DG + E + + R + F EKE + DGEE E +G + + +
Sbjct: 611 CEYRESSDGERYA*EYEELKVTDFVSFRVEMDDFLEKEGYSDGEE---EWEGYS-CDSDV 444
Query: 124 EANLIIHDIGNEERKIDEEEGVEEENEEKGNCS 156
E++L G E E + EEE EEK N S
Sbjct: 443 ESSLTTAVNGAEV----ELKTYEEEIEEKANAS 357
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.339 0.149 0.490
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,036,162
Number of Sequences: 36976
Number of extensions: 206832
Number of successful extensions: 2340
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 2128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2265
length of query: 439
length of database: 9,014,727
effective HSP length: 99
effective length of query: 340
effective length of database: 5,354,103
effective search space: 1820395020
effective search space used: 1820395020
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC149305.8