TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149305.4 - phase: 0 /partial
         (542 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC81905 weakly similar to GP|22830972|dbj|BAC15836. contains EST...   270  1e-72
AA660579 similar to PIR|T51532|T51 hypothetical protein T20K14_1...   160  2e-39
TC89526 similar to GP|14596139|gb|AAK68797.1 Unknown protein {Ar...    30  3.1
TC86573 similar to GP|15292907|gb|AAK92824.1 unknown protein {Ar...    28  6.9
BG587802 similar to GP|20197543|gb putative beta-1 3-glucanase {...    28  9.0
TC83322 similar to PIR|E84706|E84706 hypothetical protein At2g30...    28  9.0

>TC81905 weakly similar to GP|22830972|dbj|BAC15836. contains ESTs
           C26545(C12561) AU091755(C12561)~similar to Nipped-B gene
           product, partial (8%)
          Length = 1075

 Score =  270 bits (690), Expect = 1e-72
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = +1

Query: 413 PDEPLYLIYTINRVVQVRAGPLEANFKAWSSSLLQSEGQGTPHGNGMYQRATDETIHSTQ 472
           PDEPLYLIYTINRVVQVRAGPLEANFKAWSSSLLQSEGQGTPHGNGMYQRATDETIHSTQ
Sbjct: 1   PDEPLYLIYTINRVVQVRAGPLEANFKAWSSSLLQSEGQGTPHGNGMYQRATDETIHSTQ 180

Query: 473 GQSMDLNGPFQQNVDVQPYVDDMTSVDLNGTNHQLPDYPLSHNGRLKVKPQAAGFADSFT 532
           GQSMDLNGPFQQNVDVQPYVDDMTSVDLNGTNHQLPDYPLSHNGRLKVKPQAAGFADSFT
Sbjct: 181 GQSMDLNGPFQQNVDVQPYVDDMTSVDLNGTNHQLPDYPLSHNGRLKVKPQAAGFADSFT 360

Query: 533 FSKDDLEKVQ 542
           FSKDDLEKVQ
Sbjct: 361 FSKDDLEKVQ 390


>AA660579 similar to PIR|T51532|T51 hypothetical protein T20K14_150 -
           Arabidopsis thaliana, partial (2%)
          Length = 638

 Score =  160 bits (404), Expect = 2e-39
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = +3

Query: 467 TIHSTQGQSMDLNGPFQQNVDVQPYVDDMTSVDLNGTNHQLPDYPLSHNGRLKVKPQAAG 526
           TIHSTQGQSMDLNGPFQQNVDVQPYVDDMTSVDLNGTNHQLPDYPLSHNGRLKVKPQAAG
Sbjct: 3   TIHSTQGQSMDLNGPFQQNVDVQPYVDDMTSVDLNGTNHQLPDYPLSHNGRLKVKPQAAG 182

Query: 527 FADSFTFSKDDLEKVQ 542
           FADSFTFSKDDLEKVQ
Sbjct: 183 FADSFTFSKDDLEKVQ 230


>TC89526 similar to GP|14596139|gb|AAK68797.1 Unknown protein {Arabidopsis
           thaliana}, partial (40%)
          Length = 1105

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 281 TDPLESNSKMAHHLLMNMHEKYPAFFE 307
           T P+    K  HH   N+HE++P +F+
Sbjct: 833 TFPIIPKKKQCHHFKNNLHERWPRYFK 753


>TC86573 similar to GP|15292907|gb|AAK92824.1 unknown protein {Arabidopsis
            thaliana}, partial (92%)
          Length = 2060

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 29/106 (27%), Positives = 47/106 (43%), Gaps = 18/106 (16%)
 Frame = +3

Query: 423  INRVVQVRAGPLEANFKA------WSSSLLQSEGQGTPHGNGMYQRATDETIHSTQGQSM 476
            ++ VV     PLE++F+        S+SL +  G  +   N  ++R T   + ST+   +
Sbjct: 1122 VSGVVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANSKHRRFT-WGLRSTERHVV 1298

Query: 477  DLN-GPFQQNVD----------VQPYVDDMTSVDLNGTNHQL-PDY 510
            D     FQ  +           V PYVDD   +D+N  N  + PD+
Sbjct: 1299 DFYISDFQSGLRALVKTGFGARVTPYVDDSVVIDVNPENKDMSPDF 1436


>BG587802 similar to GP|20197543|gb putative beta-1 3-glucanase {Arabidopsis
           thaliana}, partial (48%)
          Length = 753

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = -1

Query: 25  PSIVEELEQDLKQMILRHSFLAVVHACIKCLCSMSE 60
           PS + +  +D+ ++ +RH  ++ ++ CIK +C M E
Sbjct: 651 PS*LGD*NRDISKLQIRHCKISSINNCIKNICIMQE 544


>TC83322 similar to PIR|E84706|E84706 hypothetical protein At2g30280
           [imported] - Arabidopsis thaliana, partial (19%)
          Length = 725

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 12  IIDSVLPLLRKLPPSIVEELEQDLK 36
           ++ S LPLLR++ P+   E+E D+K
Sbjct: 550 LLSSFLPLLREVIPNAAAEIEDDIK 624


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.137    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,560,057
Number of Sequences: 36976
Number of extensions: 210422
Number of successful extensions: 996
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of query: 542
length of database: 9,014,727
effective HSP length: 101
effective length of query: 441
effective length of database: 5,280,151
effective search space: 2328546591
effective search space used: 2328546591
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)