TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149305.10 + phase: 0 /pseudo
         (55 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC85570 homologue to SP|Q96558|UGDH_SOYBN UDP-glucose 6-dehydrog...    74  9e-15
TC76419 similar to SP|Q96558|UGDH_SOYBN UDP-glucose 6-dehydrogen...    68  8e-13
TC89010 similar to SP|Q96558|UGDH_SOYBN UDP-glucose 6-dehydrogen...    68  8e-13
TC78185 similar to GP|9955528|emb|CAC05467.1 putative protein {A...    22  8.5

>TC85570 homologue to SP|Q96558|UGDH_SOYBN UDP-glucose 6-dehydrogenase (EC
           1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH).
           [Soybean], complete
          Length = 1810

 Score = 74.3 bits (181), Expect = 9e-15
 Identities = 35/55 (63%), Positives = 42/55 (75%)
 Frame = +3

Query: 1   MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
           MA IALK  S +V VVDI+K RI AW +D +PIY+PG D +VKQCR KNLFF T+
Sbjct: 138 MAVIALKCPSIEVAVVDISKPRIAAWNSDTLPIYEPGLDDVVKQCRGKNLFFSTD 302


>TC76419 similar to SP|Q96558|UGDH_SOYBN UDP-glucose 6-dehydrogenase (EC
           1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH).
           [Soybean], complete
          Length = 1898

 Score = 67.8 bits (164), Expect = 8e-13
 Identities = 32/55 (58%), Positives = 39/55 (70%)
 Frame = +3

Query: 1   MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
           MA IALK    +V VVDI   RI AW +D +PIY+PG D +VK+CR KNLFF T+
Sbjct: 177 MAVIALKCPEIEVAVVDIATPRINAWNSDHLPIYEPGLDDVVKKCRGKNLFFSTD 341


>TC89010 similar to SP|Q96558|UGDH_SOYBN UDP-glucose 6-dehydrogenase (EC
           1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH).
           [Soybean], partial (84%)
          Length = 1659

 Score = 67.8 bits (164), Expect = 8e-13
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = +3

Query: 1   MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
           MA IALK  S +V VVDI+ SRI AW +D++PIY+PG + +++QCR KNL F T+
Sbjct: 312 MAVIALKCPSIEVAVVDISHSRISAWNSDKLPIYEPGLEEVIQQCRGKNLLFSTD 476


>TC78185 similar to GP|9955528|emb|CAC05467.1 putative protein {Arabidopsis
           thaliana}, partial (24%)
          Length = 1351

 Score = 21.6 bits (44), Expect(2) = 8.5
 Identities = 13/36 (36%), Positives = 18/36 (49%)
 Frame = -3

Query: 3   AIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGF 38
           AI LKF+S+    + I  S      ++ IPI Q  F
Sbjct: 971 AIGLKFSSSKSISISIKSSTPSTVSSELIPILQSFF 864



 Score = 21.2 bits (43), Expect(2) = 8.5
 Identities = 7/13 (53%), Positives = 9/13 (68%)
 Frame = -1

Query: 32  PIYQPGFDGLVKQ 44
           P Y P FDG ++Q
Sbjct: 883 PYYNPSFDGSLQQ 845


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.326    0.140    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,568,015
Number of Sequences: 36976
Number of extensions: 13449
Number of successful extensions: 79
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of query: 55
length of database: 9,014,727
effective HSP length: 31
effective length of query: 24
effective length of database: 7,868,471
effective search space: 188843304
effective search space used: 188843304
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (24.3 bits)