TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149293.2 - phase: 2 
         (212 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC90764 similar to PIR|T05666|T05666 hypothetical protein F22I13...    33  0.11
BQ141754 similar to GP|1903309|emb| orf 1035 {Spodoptera littora...    29  1.2
AW573991                                                               28  2.0
TC82829 weakly similar to GP|14334592|gb|AAK59474.1 unknown prot...    28  2.6
AW686640                                                               28  2.6
TC80951 similar to PIR|D96519|D96519 mysoin-like protein  11013-...    28  3.4
BQ135622                                                               27  4.4
TC79808 similar to GP|2443886|gb|AAB71479.1| Unknown protein {Ar...    27  5.8
BM778992 similar to GP|21594024|gb| unknown {Arabidopsis thalian...    26  9.8

>TC90764 similar to PIR|T05666|T05666 hypothetical protein F22I13.150 -
           Arabidopsis thaliana, partial (57%)
          Length = 1219

 Score = 32.7 bits (73), Expect = 0.11
 Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 8/122 (6%)
 Frame = +2

Query: 24  GMKDSWGPLKALAAASVINGVGDIVLCTYLGYGIAGAAWATMASQVVAAYMMMRTLNMK- 82
           G KD+  P+  L   ++       +L  Y   G+AGAA +T+ SQ +   +M+  LN + 
Sbjct: 755 GFKDTKTPVICLGIGNLSAVFLFPLLMYYFKLGVAGAAISTVLSQYIGTLLMIWCLNKRA 934

Query: 83  -------GYNAFALSIPSGREFITILGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMAA 135
                  G   F   I SG     +LG    V  TM       +L    A   G   MAA
Sbjct: 935 VLLPPKMGNLQFGGYIKSGG---FVLGRTLAVLTTM-------TLGTSMAARHGPVAMAA 1084

Query: 136 HQ 137
           HQ
Sbjct: 1085HQ 1090


>BQ141754 similar to GP|1903309|emb| orf 1035 {Spodoptera littoralis
           nucleopolyhedrovirus}, partial (4%)
          Length = 1308

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -3

Query: 118 YSLLIYFATSMGTHTMAAHQYGVNLSRKLLNHLCLNCYMEL 158
           YSLL YF  S  T T++   Y +     L+  +C NCYM +
Sbjct: 868 YSLLYYFCRSCVTSTLSTS*YELYCFSILV--ICYNCYMSV 752


>AW573991 
          Length = 652

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 12/22 (54%), Positives = 15/22 (67%)
 Frame = -1

Query: 112 MSKVAFYSLLIYFATSMGTHTM 133
           + K   YS+ IY  TS+GTHTM
Sbjct: 601 IKKKLLYSIFIYEITSIGTHTM 536


>TC82829 weakly similar to GP|14334592|gb|AAK59474.1 unknown protein
           {Arabidopsis thaliana}, partial (12%)
          Length = 703

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 16/58 (27%), Positives = 27/58 (45%)
 Frame = +1

Query: 92  PSGREFITILGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMAAHQYGVNLSRKLLNH 149
           PS   F+ + G+   VF  ++S   F+S L+ F   +   T    Q+ + L    L+H
Sbjct: 169 PSSPSFLMLHGM---VFTLLISSCLFFSFLLVFLLHLFIRTRDQDQHNLLLGNHYLDH 333


>AW686640 
          Length = 518

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = +3

Query: 97  FITILGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMA 134
           F ++L    P+++T+   ++FYS +I+ +     H++A
Sbjct: 3   FSSLLSFILPIYITLFFSLSFYSTIIFLSYFNTFHSLA 116


>TC80951 similar to PIR|D96519|D96519 mysoin-like protein  11013-7318
           [imported] - Arabidopsis thaliana, partial (14%)
          Length = 1050

 Score = 27.7 bits (60), Expect = 3.4
 Identities = 19/60 (31%), Positives = 24/60 (39%), Gaps = 11/60 (18%)
 Frame = -3

Query: 103 LAAPVFMTMMSKVAFYSLLIY-----------FATSMGTHTMAAHQYGVNLSRKLLNHLC 151
           LA   FM  M    + SLL+            FA   GTHT  + Q+ V   +    HLC
Sbjct: 433 LAVYAFMVHMDGRFWRSLLLITCLALCFQNLKFAKCFGTHTS*SLQFAVTFCQSFFQHLC 254


>BQ135622 
          Length = 798

 Score = 27.3 bits (59), Expect = 4.4
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = -3

Query: 141 NLSRKLLNHLCLNCYME 157
           N+SR+L+N +CLN Y+E
Sbjct: 607 NISRELINIVCLNVYVE 557


>TC79808 similar to GP|2443886|gb|AAB71479.1| Unknown protein {Arabidopsis
           thaliana}, partial (37%)
          Length = 1001

 Score = 26.9 bits (58), Expect = 5.8
 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
 Frame = -1

Query: 61  AWATMASQVVAAYMMMRTL--NMKGYNAFALSIPSGREFITILGLAAPVFMTMMSKVAFY 118
           A+ T    V+ A  M  ++  +++ ++A +      R+FIT L +++ + +T++S  +  
Sbjct: 623 AFLTAIRSVIVARSMSGSVPDSLRNFSAASTKPSVTRKFITNLFMSSFLILTLLSFFSPS 444

Query: 119 SLLIYFATSMGTH 131
           SL+I F  +  TH
Sbjct: 443 SLVITFFDAAFTH 405


>BM778992 similar to GP|21594024|gb| unknown {Arabidopsis thaliana}, partial
           (38%)
          Length = 682

 Score = 26.2 bits (56), Expect = 9.8
 Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 20/93 (21%)
 Frame = -1

Query: 93  SGREFITILGLAAPVFMTMMSKV---------AFYSLLIYFATSMGTHTMAAHQYGVNLS 143
           +G  FIT +GL     + ++  V         + +S L+ ++  +G  T+    Y    +
Sbjct: 418 NGENFITKIGLVYCSLLLLVGNVILF*A*GCRSLFSFLLQYSR*VGQATI*ILYYHCLGN 239

Query: 144 RKLLNHLCL-----------NCYMELIGICQRP 165
            KL   + +           NCY  ++G+C+ P
Sbjct: 238 GKLQIVIAIVFQ*SIEGW*NNCYFNIVGVCKMP 140


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.338    0.146    0.479 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,045,114
Number of Sequences: 36976
Number of extensions: 103798
Number of successful extensions: 842
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of query: 212
length of database: 9,014,727
effective HSP length: 92
effective length of query: 120
effective length of database: 5,612,935
effective search space: 673552200
effective search space used: 673552200
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 56 (26.2 bits)