BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149210.3 + phase: 0
(195 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC85957 homologue to PIR|S57471|S57471 GTP-binding protein GTP6 ... 292 5e-80
TC77240 homologue to GP|1370196|emb|CAA98175.1 RAB8D {Lotus japo... 292 5e-80
TC77618 homologue to PIR|S57478|S57478 GTP-binding protein GTP13... 289 5e-79
TC85959 homologue to PIR|S57471|S57471 GTP-binding protein GTP6 ... 270 3e-73
TC77239 homologue to GP|1370196|emb|CAA98175.1 RAB8D {Lotus japo... 253 4e-72
TC79203 homologue to PIR|S41430|S41430 GTP-binding protein ras-... 196 4e-51
TC77446 homologue to GP|303750|dbj|BAA02116.1| GTP-binding prote... 189 6e-49
TC77453 homologue to GP|303732|dbj|BAA02117.1| GTP-binding prote... 187 2e-48
TC86827 homologue to GP|303748|dbj|BAA02115.1| GTP-binding prote... 174 2e-44
AL385573 homologue to GP|11558647|em secretion related GTPase (... 173 4e-44
TC86480 homologue to SP|Q40193|R11C_LOTJA Ras-related protein Ra... 148 1e-36
TC77335 homologue to GP|1370176|emb|CAA98165.1 RAB2A {Lotus japo... 146 4e-36
TC87022 homologue to SP|O04486|RB1C_ARATH Ras-related protein Ra... 146 4e-36
TC84871 similar to GP|1370172|emb|CAA98163.1 RAB1X {Lotus japoni... 142 6e-35
TC80761 homologue to GP|1370174|emb|CAA98164.1 RAB1Y {Lotus japo... 142 8e-35
BE205479 homologue to PIR|T06443|T06 GTP-binding protein - garde... 139 5e-34
TC89490 homologue to GP|1370174|emb|CAA98164.1 RAB1Y {Lotus japo... 139 5e-34
TC86724 homologue to PIR|T06445|T06445 GTP-binding protein - gar... 139 9e-34
TC90322 similar to GP|1370172|emb|CAA98163.1 RAB1X {Lotus japoni... 138 1e-33
TC88814 homologue to PIR|T06447|T06447 GTP-binding protein - gar... 138 1e-33
>TC85957 homologue to PIR|S57471|S57471 GTP-binding protein GTP6 - garden
pea, complete
Length = 1148
Score = 292 bits (748), Expect = 5e-80
Identities = 151/193 (78%), Positives = 167/193 (86%), Gaps = 3/193 (1%)
Frame = +3
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFSD FTTS+ITT+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 276 SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 455
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDESSFNNI NWIR+IEQH+SDN VNKILVGNK DMDESKRAVP S
Sbjct: 456 YYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDN-VNKILVGNKADMDESKRAVPTS 632
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL--PDSKKTPSRIRINK-HNNA 182
KGQALA++YGIKFFETSAKTN+NVDE FFSIARDIKQRL DSK P ++IN+ A
Sbjct: 633 KGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAESDSKTEPQTLKINQPDQGA 812
Query: 183 TAARGSQKSECCG 195
+A+ SQ S CCG
Sbjct: 813 GSAQASQTSSCCG 851
>TC77240 homologue to GP|1370196|emb|CAA98175.1 RAB8D {Lotus japonicus},
complete
Length = 1148
Score = 292 bits (748), Expect = 5e-80
Identities = 148/192 (77%), Positives = 168/192 (87%), Gaps = 2/192 (1%)
Frame = +1
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFSD FTTS+ITT+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 292 SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 471
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDE+SFNNI NWIR+IEQH+SDN VNKILVGNK DMDESKRAVP S
Sbjct: 472 YYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDN-VNKILVGNKADMDESKRAVPTS 648
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL--PDSKKTPSRIRINKHNNAT 183
KGQALA++YGIKFFETSAKTNLNV+E FFSIARDIKQRL D+K P+ I+IN+ +
Sbjct: 649 KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQDSATG 828
Query: 184 AARGSQKSECCG 195
+ + +QKS CCG
Sbjct: 829 SGQAAQKSACCG 864
>TC77618 homologue to PIR|S57478|S57478 GTP-binding protein GTP13 - garden
pea, complete
Length = 1136
Score = 289 bits (739), Expect = 5e-79
Identities = 148/193 (76%), Positives = 166/193 (85%), Gaps = 3/193 (1%)
Frame = +2
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFSD FTTS+ITT+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 287 SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 466
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDE+SFNNI NWIR+IEQH+SDN VNKILVGNK DMDESKRAVP S
Sbjct: 467 YYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDN-VNKILVGNKADMDESKRAVPTS 643
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPD--SKKTPSRIRINKHNN-A 182
KGQALA++YGIKFFETSAKTN+NV+E FFSIARDIKQRL D S P I+IN+ + A
Sbjct: 644 KGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTVSSTEPQSIKINQQDQAA 823
Query: 183 TAARGSQKSECCG 195
+ +QKS CCG
Sbjct: 824 NGGQAAQKSACCG 862
>TC85959 homologue to PIR|S57471|S57471 GTP-binding protein GTP6 - garden
pea, complete
Length = 886
Score = 270 bits (690), Expect = 3e-73
Identities = 139/177 (78%), Positives = 154/177 (86%), Gaps = 9/177 (5%)
Frame = +3
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFSD FTTS+ITT+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 141 SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 320
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDESSFNNI NWIR+IEQH+SDN VNKILVGNK DMDESKRAVP S
Sbjct: 321 YYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN-VNKILVGNKADMDESKRAVPTS 497
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQR---------LPDSKKTPSR 173
KGQALA++YGIKFFETSAKTNLNV+E FFSIARDIKQ+ PD++ P+R
Sbjct: 498 KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQKTCRY*LKI*APDNQD*PTR 668
Score = 32.7 bits (73), Expect = 0.092
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 166 DSKKTPSRIRINKHNN-ATAARGSQKSECCG 195
DSK P I+IN+ + A AA+ +QKS CCG
Sbjct: 625 DSKSEPQTIKINQPDQGAGAAQAAQKSACCG 717
>TC77239 homologue to GP|1370196|emb|CAA98175.1 RAB8D {Lotus japonicus},
partial (96%)
Length = 816
Score = 253 bits (646), Expect(2) = 4e-72
Identities = 126/149 (84%), Positives = 138/149 (92%)
Frame = +1
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFSD FTTS+ITT+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 265 SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 444
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDE+SFNNI NWIR+IEQH+SDN VNKILVGNK DMDESKRAVP S
Sbjct: 445 YYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDN-VNKILVGNKADMDESKRAVPTS 621
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFF 154
KGQALA++YGIKFFETSAKTNLNV+E FF
Sbjct: 622 KGQALADEYGIKFFETSAKTNLNVEEVFF 708
Score = 35.0 bits (79), Expect(2) = 4e-72
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 2/29 (6%)
Frame = +3
Query: 152 AFFSIARDIKQRL--PDSKKTPSRIRINK 178
+FFSIARDIKQRL D+K P+ I+IN+
Sbjct: 699 SFFSIARDIKQRLADTDNKAEPTTIKINQ 785
>TC79203 homologue to PIR|S41430|S41430 GTP-binding protein ras-like (clone
vfa-ypt1) - fava bean, complete
Length = 920
Score = 196 bits (499), Expect = 4e-51
Identities = 101/192 (52%), Positives = 136/192 (70%), Gaps = 3/192 (1%)
Frame = +1
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRF+D + SYI+T+G+D+K R +E DGK I LQ+WDTAGQERFRTIT++
Sbjct: 256 SGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSS 435
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA GI++VYDVTDE SFNN+ W+ I++++SDN VNK+LVGNK D+ S+RAV +
Sbjct: 436 YYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDN-VNKLLVGNKCDL-TSERAVSYD 609
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL---PDSKKTPSRIRINKHNNA 182
+A A++ GI F ETSAK + NV++AF ++A IK R+ P + P ++I
Sbjct: 610 TAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNARPPTVQIR----- 774
Query: 183 TAARGSQKSECC 194
QKS CC
Sbjct: 775 -GQPVGQKSGCC 807
>TC77446 homologue to GP|303750|dbj|BAA02116.1| GTP-binding protein {Pisum
sativum}, complete
Length = 1080
Score = 189 bits (480), Expect = 6e-49
Identities = 96/192 (50%), Positives = 136/192 (70%), Gaps = 3/192 (1%)
Frame = +3
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRF+D + SYI+T+G+D+K R +E DGK I LQ+WDTAGQERFRTIT++
Sbjct: 165 SGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSS 344
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA GI++VYDVTD+ SFNN+ W+ I++++S+N VNK+LVGNK D+ + K+ V
Sbjct: 345 YYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASEN-VNKLLVGNKSDLSD-KKVVSSE 518
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL---PDSKKTPSRIRINKHNNA 182
+A A++ GI F ETSAK NV++AF ++A +IK R+ P + P+ ++I
Sbjct: 519 TAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSARPATVQIR----- 683
Query: 183 TAARGSQKSECC 194
+QK+ CC
Sbjct: 684 -GQPVNQKAGCC 716
>TC77453 homologue to GP|303732|dbj|BAA02117.1| GTP-binding protein {Pisum
sativum}, complete
Length = 944
Score = 187 bits (475), Expect = 2e-48
Identities = 99/192 (51%), Positives = 129/192 (66%), Gaps = 3/192 (1%)
Frame = +1
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRF+D + SYI+T+G+D+K R +E DGK I LQ+WDTAGQERFRTIT++
Sbjct: 172 SGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSS 351
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA GI++VYDVTDE SFNN+ W+ I++++SDN VNK+LVGNK D+ + RAV +
Sbjct: 352 YYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDN-VNKLLVGNKSDL-TANRAVSYD 525
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
+ A++ GI F ETSAK NV+ AF ++A IK R+ N
Sbjct: 526 TAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSAN-----NARPPTVQI 690
Query: 186 RG---SQKSECC 194
RG QKS CC
Sbjct: 691 RGQPVGQKSGCC 726
>TC86827 homologue to GP|303748|dbj|BAA02115.1| GTP-binding protein {Pisum
sativum}, complete
Length = 917
Score = 174 bits (441), Expect = 2e-44
Identities = 90/193 (46%), Positives = 135/193 (69%), Gaps = 3/193 (1%)
Frame = +2
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+ VGKS LLLRF+D + +YI+T+G+D+K R +EL+GK LQ+WDTAGQERFRTIT++
Sbjct: 173 SSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIWDTAGQERFRTITSS 352
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA GI++VYDVTD SFNN+ W+ I+++++ + V+K+LVGNK D+ ++K V
Sbjct: 353 YYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHS-VSKLLVGNKCDLTDNK-LVHTH 526
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
+A A++ GI F ETSAK ++NV++AF ++A +IK ++ S+ T S+ +
Sbjct: 527 TAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKM-GSQPTGSK----SAAESVQM 691
Query: 186 RG---SQKSECCG 195
+G Q + CCG
Sbjct: 692 KGQPIQQNTNCCG 730
>AL385573 homologue to GP|11558647|em secretion related GTPase (SrgA)
{Aspergillus niger}, partial (61%)
Length = 463
Score = 173 bits (438), Expect = 4e-44
Identities = 86/114 (75%), Positives = 96/114 (83%)
Frame = +2
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFSD FT S+ITT+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 116 SGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 295
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESK 119
YYRGAMGILLVYDVTDE SF NI NW +IEQH+S+ VNKIL+GNK D E K
Sbjct: 296 YYRGAMGILLVYDVTDERSFKNIRNWFSNIEQHASEG-VNKILIGNKCDWVEKK 454
>TC86480 homologue to SP|Q40193|R11C_LOTJA Ras-related protein Rab11C.
{Lotus japonicus}, complete
Length = 1173
Score = 148 bits (373), Expect = 1e-36
Identities = 71/155 (45%), Positives = 107/155 (68%)
Frame = +3
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS++L RF+ + F +T+G+++ R ++++GK + Q+WDTAGQER+R IT+A
Sbjct: 255 SGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSA 434
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA+G LLVYD+T +F+N+ W+R + H+ NIV ++ GNK D++ RAV
Sbjct: 435 YYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIV-IMMAGNKSDLNH-LRAVSED 608
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDI 160
GQALA K G+ F ETSA N+++AF +I +I
Sbjct: 609 DGQALAEKEGLSFLETSALEATNIEKAFQTILTEI 713
>TC77335 homologue to GP|1370176|emb|CAA98165.1 RAB2A {Lotus japonicus},
complete
Length = 1121
Score = 146 bits (369), Expect = 4e-36
Identities = 74/160 (46%), Positives = 106/160 (66%)
Frame = +3
Query: 7 GVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTAY 66
GVGKS LLL+F+D F + T+G+++ R I +D K I LQ+WDTAGQE FR+IT +Y
Sbjct: 276 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSY 455
Query: 67 YRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFSK 126
YRGA G LLVYD+T +FN++ +W+ QH++ N + +L+GNK D+ +RAV +
Sbjct: 456 YRGAAGALLVYDITRRETFNHLASWLEDARQHANAN-MTIMLIGNKCDL-AHRRAVSTEE 629
Query: 127 GQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPD 166
G+ A + G+ F E SAKT NV+EAF A I +++ D
Sbjct: 630 GEQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQD 749
>TC87022 homologue to SP|O04486|RB1C_ARATH Ras-related protein Rab11C.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (81%)
Length = 1014
Score = 146 bits (369), Expect = 4e-36
Identities = 79/197 (40%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Frame = +2
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS+LL RF+ + F +T+G+++ R ++++G+ + Q+WDTAGQER+R IT+A
Sbjct: 113 SGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSA 292
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA+G LLVYDVT ++F+N+T W++ + H+ NIV +L+GNK D+ + RAV
Sbjct: 293 YYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIV-IMLIGNKTDL-KHLRAVATE 466
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFS----IARDIKQRLPDSKKTPSRIRINKHNN 181
Q+ A K G+ F ETSA NV++AF + I R I ++ + P+ K
Sbjct: 467 DAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTANEPAAAANIKEGK 646
Query: 182 ATAARGSQKSE----CC 194
A GS+ + CC
Sbjct: 647 TIAIGGSETTNTNKPCC 697
>TC84871 similar to GP|1370172|emb|CAA98163.1 RAB1X {Lotus japonicus},
partial (87%)
Length = 727
Score = 142 bits (359), Expect = 6e-35
Identities = 76/158 (48%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Frame = +3
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+ VGKSSLL+ F S T+G+D+K + + + GK++ L +WDTAGQERFRT+T++
Sbjct: 162 SAVGKSSLLVSFI-SGSVEDPAPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFRTLTSS 338
Query: 66 YYRGAMGILLVYDVTDESSFNNITN-WIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPF 124
YYRGA GI+LVYDVT +F N++ W + +E +S++ K+LVGNKVD ES+R V
Sbjct: 339 YYRGAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCMKMLVGNKVDR-ESERTVST 515
Query: 125 SKGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQ 162
+G ALA ++G FFE SAKT NVD+ F +A I +
Sbjct: 516 EEGLALAKEFGCSFFECSAKTRENVDKCFEELALKIME 629
>TC80761 homologue to GP|1370174|emb|CAA98164.1 RAB1Y {Lotus japonicus},
partial (94%)
Length = 994
Score = 142 bits (358), Expect = 8e-35
Identities = 73/149 (48%), Positives = 102/149 (67%), Gaps = 1/149 (0%)
Frame = +1
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKSSLLLRF+ F T+G+D+K + + ++GKK+ L +WDTAGQERFRT+T++
Sbjct: 175 SGVGKSSLLLRFTSDDFD-DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQERFRTLTSS 351
Query: 66 YYRGAMGILLVYDVTDESSFNNITN-WIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPF 124
YYRGA GI++VYDVT +F N++ W + I+ +S++ K+LVGNKVD E R V
Sbjct: 352 YYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVD-KEGDRVVTK 528
Query: 125 SKGQALANKYGIKFFETSAKTNLNVDEAF 153
+G A +YG F E SAKT +NV + F
Sbjct: 529 KEGIDFAREYGCLFIECSAKTRVNVQQCF 615
>BE205479 homologue to PIR|T06443|T06 GTP-binding protein - garden pea,
partial (77%)
Length = 499
Score = 139 bits (351), Expect = 5e-34
Identities = 68/155 (43%), Positives = 106/155 (67%)
Frame = +2
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+ VGKS+LL RF+ + F + T+G++++ + +E+DGK++ Q+WDTAGQERFR +T+A
Sbjct: 11 SAVGKSNLLFRFARNEFDSGSRATIGVEFQTQMVEIDGKEVKAQIWDTAGQERFRAVTSA 190
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA G L+VYD++ +F +I W+ + +D+ V ++LVGNK D+ E+ R V
Sbjct: 191 YYRGAFGALVVYDISRRGTFESIKRWLDELTT-QNDSTVARMLVGNKCDL-ENIREVSIE 364
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDI 160
+G+ALA + G+ F ETSA + NV AF + R+I
Sbjct: 365 EGKALAEEEGLFFMETSALDSTNVQTAFEIVIREI 469
>TC89490 homologue to GP|1370174|emb|CAA98164.1 RAB1Y {Lotus japonicus},
complete
Length = 1047
Score = 139 bits (351), Expect = 5e-34
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 2/150 (1%)
Frame = +2
Query: 6 AGVGKSSLLLRF-SDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITT 64
+GVGKSSLLL F SDS+ S T+G+D+K + +DGKK+ L +WDTAGQERFRT+T+
Sbjct: 185 SGVGKSSLLLCFTSDSFENLS--PTIGVDFKVKYFTIDGKKLKLAIWDTAGQERFRTLTS 358
Query: 65 AYYRGAMGILLVYDVTDESSFNNITN-WIRSIEQHSSDNIVNKILVGNKVDMDESKRAVP 123
+YYRGA GI++ YDVT +F N++ W + ++ +S++ K+LVGNKVD ES R V
Sbjct: 359 SYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVD-KESDRVVT 535
Query: 124 FSKGQALANKYGIKFFETSAKTNLNVDEAF 153
+G A +YG F E SAKT +NV F
Sbjct: 536 KKEGIDFAREYGCLFIECSAKTRVNVQHCF 625
>TC86724 homologue to PIR|T06445|T06445 GTP-binding protein - garden pea,
complete
Length = 1037
Score = 139 bits (349), Expect = 9e-34
Identities = 67/155 (43%), Positives = 103/155 (66%)
Frame = +3
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+ VGKS +L RFS + F+ +T+G++++ R + +D K + Q+WDTAGQER+R +T+A
Sbjct: 249 SAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSA 428
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA+G +LVYD+T +F++I W+ + H+ NIV ILVGNK D+ E++R VP
Sbjct: 429 YYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIV-IILVGNKSDL-ENQRDVPTE 602
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDI 160
+ A K G+ F ETSA NV+ +F ++ +I
Sbjct: 603 DAKEFAEKEGLFFLETSALQATNVEASFMTVLTEI 707
>TC90322 similar to GP|1370172|emb|CAA98163.1 RAB1X {Lotus japonicus},
partial (98%)
Length = 1054
Score = 138 bits (348), Expect = 1e-33
Identities = 72/158 (45%), Positives = 105/158 (65%), Gaps = 1/158 (0%)
Frame = +1
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LL+ F + T+G+D+K + + + GK++ L +WDTAGQERFRT+T++
Sbjct: 316 SGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDTAGQERFRTLTSS 495
Query: 66 YYRGAMGILLVYDVTDESSFNNITN-WIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPF 124
YYRGA GI+LVYDVT +F N++ W + +E +S++ K+LVGNKVD D S+RAV
Sbjct: 496 YYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNKVDKD-SERAVSR 672
Query: 125 SKGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQ 162
+G +LA + G E SAKT NV++ F +A I +
Sbjct: 673 EEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIME 786
>TC88814 homologue to PIR|T06447|T06447 GTP-binding protein - garden pea,
complete
Length = 1183
Score = 138 bits (348), Expect = 1e-33
Identities = 79/199 (39%), Positives = 116/199 (57%), Gaps = 10/199 (5%)
Frame = +3
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS+LL RF+ + F+ +T+G+++ R+I +D K + Q+WDTAGQER+R IT+A
Sbjct: 348 SGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSA 527
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA+G LLVYDVT +F N+ W++ + H+ NIV +LVGNK D+ RAV
Sbjct: 528 YYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV-VMLVGNKADL-RHLRAVSTE 701
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDI-----KQRL-----PDSKKTPSRIR 175
A A + F ETSA ++NV+ AF + I K+ L P + I
Sbjct: 702 DSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEIGDDPTALPKGQTID 881
Query: 176 INKHNNATAARGSQKSECC 194
+ ++ +A + KS CC
Sbjct: 882 VGSRDDVSAVK---KSGCC 929
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,253,151
Number of Sequences: 36976
Number of extensions: 54772
Number of successful extensions: 408
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of query: 195
length of database: 9,014,727
effective HSP length: 91
effective length of query: 104
effective length of database: 5,649,911
effective search space: 587590744
effective search space used: 587590744
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Medicago: description of AC149210.3