BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149209.11 - phase: 0
(607 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC85727 homologue to PIR|D84431|D84431 probable endosomal protei... 885 0.0
TC88093 homologue to PIR|D84431|D84431 probable endosomal protei... 578 e-165
TC77550 similar to GP|15451172|gb|AAK96857.1 endomembrane protei... 491 e-139
TC77305 similar to GP|15451172|gb|AAK96857.1 endomembrane protei... 199 e-127
TC86060 similar to GP|13430446|gb|AAK25845.1 putative multispann... 357 7e-99
TC92295 weakly similar to GP|6664322|gb|AAF22904.1| T27G7.5 {Ara... 356 2e-98
TC87740 similar to PIR|D84431|D84431 probable endosomal protein ... 337 6e-93
TC86059 similar to GP|13430446|gb|AAK25845.1 putative multispann... 199 5e-81
TC85726 similar to GP|15450755|gb|AAK96649.1 T5E21.14/T5E21.14 {... 292 2e-79
TC85725 homologue to PIR|D84431|D84431 probable endosomal protei... 225 4e-59
AW774550 homologue to PIR|D84431|D84 probable endosomal protein ... 205 5e-53
TC93075 weakly similar to GP|15010758|gb|AAK74038.1 At1g08350/T2... 176 2e-44
TC89088 homologue to PIR|H85135|H85135 hypothetical protein AT4g... 169 4e-42
TC82814 homologue to GP|10176814|dbj|BAB10022. endosomal protein... 162 3e-40
BG646208 homologue to GP|9294023|dbj multispanning membrane prot... 123 2e-28
BG648902 homologue to GP|1323798|gb| transposase {Plasmid pRL106... 102 6e-22
AW560291 homologue to GP|9294023|dbj multispanning membrane prot... 100 3e-21
CB891612 similar to GP|5257264|dbj ESTs AU064813(E40579) D24600(... 61 1e-09
AW691228 similar to PIR|H96592|H96 probable multispanning membra... 45 8e-05
TC86034 similar to GP|6815067|dbj|BAA90354.1 ESTs AU082210(C5365... 32 0.54
>TC85727 homologue to PIR|D84431|D84431 probable endosomal protein
[imported] - Arabidopsis thaliana, partial (89%)
Length = 1925
Score = 885 bits (2286), Expect = 0.0
Identities = 429/584 (73%), Positives = 485/584 (82%)
Frame = +3
Query: 24 IVILCCFCCINYVTSDASDHRYKEGDFVPFYANKVGPFHNPSETYRYFDLPFCSPENVEE 83
I +L +V SDASDHRY +GD VP YANKVGPFHNPSETYRY DLPFC + +E
Sbjct: 12 IHLLISLLAATHVRSDASDHRYSDGDAVPLYANKVGPFHNPSETYRYLDLPFCVTGHEKE 191
Query: 84 KKEDLGEVLNGDRLVVAPYKLEFLIDKKPESICQKMLTRKEVAQFRHAVLKDYFYQMYYD 143
K LTR++V QFR AV KDY++QMYYD
Sbjct: 192 KT----------------------------------LTREQVNQFREAVKKDYYFQMYYD 269
Query: 144 DLPIWGFLGRFETDEKDVDTNEATVYLFRNVHFEILYNNDRIIDVFVKNDPNAVVDLTED 203
DLPIWGF+G + + K D +E +L++++ F++LYN DR+I++ + DP++VVDLTED
Sbjct: 270 DLPIWGFIGTVDKEGK-ADPSEYKYFLYKHIQFDVLYNKDRVIEISARMDPHSVVDLTED 446
Query: 204 REVNVDFTYSVKWIETDIPFEKRLEKYSQTSSLSHHLEIHWFSIINSCVTVLLLTGFLAM 263
REV+V+F Y+VKW ETDIPFEKR+EKYSQ+SSL HHLEIHWFSIINSCVTVLLLTGFLA
Sbjct: 447 REVDVEFMYTVKWKETDIPFEKRMEKYSQSSSLPHHLEIHWFSIINSCVTVLLLTGFLAT 626
Query: 264 ILMRVLKNDFVKFTPDEEALDDQEETGWKYIHGDVFRYPRFKSLFAAALGTGTQLFTLVI 323
ILMRVLKNDF+K+ DEEA DDQEETGWKYIHGDVFR+P+FKS+FAAALG+GTQLFTL I
Sbjct: 627 ILMRVLKNDFMKYAQDEEAADDQEETGWKYIHGDVFRFPKFKSIFAAALGSGTQLFTLTI 806
Query: 324 FIFMLALVGVFYPYNRGALFTALVVIYALTSGIASYSAASFYYMIEGKNWVKILVLTGSL 383
FIFMLALVGVFYPYNRGALFTALVVIYALTSGIA Y+A SFY +EG NWV+ L+LTG L
Sbjct: 807 FIFMLALVGVFYPYNRGALFTALVVIYALTSGIAGYTATSFYIQLEGTNWVRNLLLTGCL 986
Query: 384 FSGPLFFTFSFLNTVAVAYNSTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQSEFQ 443
F GPLF F FLNTVA+AY++TAALPFGTI VI LIWTLVTSPLLVLGGIAGKNS++EFQ
Sbjct: 987 FCGPLFLMFCFLNTVAIAYSATAALPFGTICVIVLIWTLVTSPLLVLGGIAGKNSKTEFQ 1166
Query: 444 APCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASVWGHQIYTIYSILF 503
AP RT KYPREIP LPWYR T+ QMAMAGFLPFSAI+IELYYIFASVWGH+IYTIYSILF
Sbjct: 1167APVRTTKYPREIPPLPWYRSTIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILF 1346
Query: 504 IVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCMFFYHARSDMSG 563
IVFIILLIVTAF VALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYC+++Y+ARSDMSG
Sbjct: 1347IVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCLYYYYARSDMSG 1526
Query: 564 FMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
FMQTSFFFGYMACICYGFFLMLG+V FRASL+FVRHIYRS+KCE
Sbjct: 1527FMQTSFFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 1658
>TC88093 homologue to PIR|D84431|D84431 probable endosomal protein
[imported] - Arabidopsis thaliana, partial (55%)
Length = 1220
Score = 578 bits (1491), Expect = e-165
Identities = 275/327 (84%), Positives = 300/327 (91%)
Frame = +2
Query: 281 EALDDQEETGWKYIHGDVFRYPRFKSLFAAALGTGTQLFTLVIFIFMLALVGVFYPYNRG 340
E +DQEETGWKYIHGDVFR+P+FKS+FAAALG+GTQLFTL +FIF+LALVGVFYP NRG
Sbjct: 2 ETAEDQEETGWKYIHGDVFRFPKFKSVFAAALGSGTQLFTLTVFIFILALVGVFYPXNRG 181
Query: 341 ALFTALVVIYALTSGIASYSAASFYYMIEGKNWVKILVLTGSLFSGPLFFTFSFLNTVAV 400
ALFTALVVIYALTSGIA Y+A SFY +EG NWV+ L+LTG LF GPLF TF FLNTVA+
Sbjct: 182 ALFTALVVIYALTSGIAGYTATSFYCQLEGTNWVRNLLLTGCLFCGPLFLTFCFLNTVAI 361
Query: 401 AYNSTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQSEFQAPCRTNKYPREIPKLPW 460
YN+TAALPFGTIVVI LIWTLVTSPLLVLGGIAGKNS++EFQAP RT KYPREIP LPW
Sbjct: 362 VYNATAALPFGTIVVIVLIWTLVTSPLLVLGGIAGKNSKAEFQAPVRTTKYPREIPPLPW 541
Query: 461 YRKTLAQMAMAGFLPFSAIFIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVAL 520
YR + QMAMAGFLPFSAI+IELYYIFASVWGH+IYTIYSILFIVFIILLIVTAF VAL
Sbjct: 542 YRGAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVAL 721
Query: 521 TYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYG 580
TYFQLAAEDHEWWWRSFLCGGSTGLFIY YC+++Y+ARSDMSGFMQTSFFFGYMACIC+G
Sbjct: 722 TYFQLAAEDHEWWWRSFLCGGSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACICFG 901
Query: 581 FFLMLGTVSFRASLIFVRHIYRSLKCE 607
FFLMLGTV FRA+L FVRHIYRS+KCE
Sbjct: 902 FFLMLGTVGFRAALFFVRHIYRSIKCE 982
>TC77550 similar to GP|15451172|gb|AAK96857.1 endomembrane protein EMP70
precusor isolog {Arabidopsis thaliana}, partial (97%)
Length = 2271
Score = 491 bits (1265), Expect = e-139
Identities = 240/573 (41%), Positives = 358/573 (61%), Gaps = 6/573 (1%)
Frame = +3
Query: 41 SDHRYKEGDFVPFYANKVGPFHNPSETYRYFDLPFCSPE-NVEEKKEDLGEVLNGDRLVV 99
SDH+Y+ D V + NKVGP++NP ETY Y+ LPFC P N K LGEVL G+ L+
Sbjct: 171 SDHKYQPDDPVTLWVNKVGPYNNPQETYNYYSLPFCRPPGNTAHKWGGLGEVLGGNELID 350
Query: 100 APYKLEFLIDKKPESICQKMLTRKEVAQFRHAVLKDYFYQMYYDDLPIWGFLGRFETDEK 159
+ +++FL + + + C+ L +V QF+ A+ +Y+++ + DDLP+WG++G D K
Sbjct: 351 SQIEIKFLGNVERTTFCRLNLDEAKVKQFKDAIENNYWFEFFMDDLPLWGYVGELHPD-K 527
Query: 160 DVDTNEATVYLFRNVHFEILYNNDRIIDVFVKNDPNAVVDLTEDREVNVDFTYSVKWIET 219
+ D+ + +Y +N+ + YN D+II V + +D ++ ++D TYSVKWI T
Sbjct: 528 NSDSGKHVLYTHKNII--VKYNTDQIIHVNLTHDDPKPLEAGR----SLDMTYSVKWIAT 689
Query: 220 DIPFEKRLEKYSQTSSLSHHLEIHWFSIINSCVTVLLLTGFLAMILMRVLKNDFVKFTPD 279
++ F R + Y H +IHWFSI NS + V+ LTG ++MILMR L+ND+ K+ +
Sbjct: 690 NVTFRHRFDVYLDYPFFEH--QIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYARE 863
Query: 280 EEAL-----DDQEETGWKYIHGDVFRYPRFKSLFAAALGTGTQLFTLVIFIFMLALVGVF 334
++ L D EE+GWK +HGDVFR PR +L +A +GTG QL L++ + +LA+VG+
Sbjct: 864 DDDLETLERDVSEESGWKLVHGDVFRPPRSLALLSAVVGTGAQLALLILLVILLAIVGML 1043
Query: 335 YPYNRGALFTALVVIYALTSGIASYSAASFYYMIEGKNWVKILVLTGSLFSGPLFFTFSF 394
Y +RGA+ T +V YALTS I+ Y + Y GK+W+K ++LT SLF F
Sbjct: 1044Y-VDRGAIVTTFIVCYALTSVISGYVSGGMYSRNGGKSWIKSMILTASLFPFLCFGIGFI 1220
Query: 395 LNTVAVAYNSTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQSEFQAPCRTNKYPRE 454
LNTVA+ Y S AA+PFGT+VV+F+IW ++ PL +LG + G+N PCR PR
Sbjct: 1221LNTVAIFYGSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRP 1400
Query: 455 IPKLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASVWGHQIYTIYSILFIVFIILLIVTA 514
IP+ WY M G LPF +IFIE+Y++F S W +++Y +Y + +VF+IL++VT
Sbjct: 1401IPEKKWYLTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIVVTV 1580
Query: 515 FGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYM 574
+ TYF L AE++ W W SFL STG+++Y Y +++Y+ ++ MSGF QTSF+FGY
Sbjct: 1581CVTIVGTYFLLNAENYNWQWTSFLSAASTGVYVYLYSIYYYYVKTKMSGFFQTSFYFGYT 1760
Query: 575 ACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
A C G ++ G V S +FVR IYR++KC+
Sbjct: 1761AMFCLGLGILCGAVGHLGSNLFVRRIYRNIKCD 1859
>TC77305 similar to GP|15451172|gb|AAK96857.1 endomembrane protein EMP70
precusor isolog {Arabidopsis thaliana}, partial (95%)
Length = 2333
Score = 199 bits (507), Expect(3) = e-127
Identities = 104/270 (38%), Positives = 160/270 (58%), Gaps = 8/270 (2%)
Frame = +1
Query: 33 INYVTSDASDHRYKEGDFVPFYANKVGPFHNPSETYRYFDLPFCSPENVE---EKKEDLG 89
I+ + SDH+Y+ D V + NKVGP++NP ETY Y+ LPFC P + K LG
Sbjct: 187 ISSTFASESDHKYQRDDPVNLWVNKVGPYNNPQETYNYYSLPFCHPSSTSAAAHKWGGLG 366
Query: 90 EVLNGDRLVVAPYKLEFLIDKKPESICQKMLTRKEVAQFRHAVLKDYFYQMYYDDLPIWG 149
EVL G+ L+ + +++FL + + CQ +L +V QF+HA+ +Y+++ + DDLP+WG
Sbjct: 367 EVLGGNELIDSQIEIKFLRNVEKTVFCQMVLDDAKVKQFKHAIENNYWFEFFMDDLPLWG 546
Query: 150 FLGRFETDEKDVDTNEATVYLFRNVHFEILYNNDRIIDVFVKNDPNAVVDLTEDREVNVD 209
++G D K D + +Y +N+ + YNND+II V + D V + ++D
Sbjct: 547 YVGELHPD-KHSDNGKHVLYTHKNI--IVKYNNDQIIHVNLTQD----VPKPLEAGKHLD 705
Query: 210 FTYSVKWIETDIPFEKRLEKYSQTSSLSHHLEIHWFSIINSCVTVLLLTGFLAMILMRVL 269
TYSVKW+ T+I F +R + Y H +IHWFSI NS + V+ LTG ++MILMR L
Sbjct: 706 LTYSVKWVPTNITFGRRFDVYLDYPFFEH--QIHWFSIFNSFMMVIFLTGLVSMILMRTL 879
Query: 270 KNDFVKFTPDEEAL-----DDQEETGWKYI 294
+ND+ K+ +++ L D EE+GWK +
Sbjct: 880 RNDYAKYAREDDDLESLERDVSEESGWKLV 969
Score = 187 bits (474), Expect(3) = e-127
Identities = 81/194 (41%), Positives = 119/194 (60%)
Frame = +3
Query: 414 VVIFLIWTLVTSPLLVLGGIAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGF 473
VV+F+IW ++ PL +LG + G+N PCR PR IP+ WY M G
Sbjct: 1326 VVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSLMGGL 1505
Query: 474 LPFSAIFIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWW 533
LPF +IFIE+Y++F S W +++Y +Y + +VF+IL IVT + TYF L AE++ W
Sbjct: 1506 LPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILTIVTVCVTIVGTYFLLNAENYHWQ 1685
Query: 534 WRSFLCGGSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRAS 593
W SF ST +++Y Y +++Y+ ++ MSGF QTSF+FGY G ++ G V F S
Sbjct: 1686 WTSFFSAASTSVYVYLYSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGS 1865
Query: 594 LIFVRHIYRSLKCE 607
+FVR IYR++KC+
Sbjct: 1866 NLFVRRIYRNIKCD 1907
Score = 110 bits (274), Expect(3) = e-127
Identities = 55/119 (46%), Positives = 77/119 (64%)
Frame = +2
Query: 295 HGDVFRYPRFKSLFAAALGTGTQLFTLVIFIFMLALVGVFYPYNRGALFTALVVIYALTS 354
HGDVFR PR+ + +A +GTG QL LV+ + +LA++G+ Y RGA+ T +V YALTS
Sbjct: 971 HGDVFRPPRYLVIISAVVGTGAQLALLVLLVILLAIIGMLY-IGRGAIVTTFIVCYALTS 1147
Query: 355 GIASYSAASFYYMIEGKNWVKILVLTGSLFSGPLFFTFSFLNTVAVAYNSTAALPFGTI 413
I+ Y + Y GK+W+K ++LT SLF F LNT+A+ Y S AA+PFGT+
Sbjct: 1148 FISGYVSGGMYSRNGGKSWIKSMILTASLFPFMCFGIGFALNTIAIFYGSLAAIPFGTM 1324
>TC86060 similar to GP|13430446|gb|AAK25845.1 putative multispanning
membrane protein {Arabidopsis thaliana}, partial (95%)
Length = 2407
Score = 357 bits (916), Expect = 7e-99
Identities = 201/610 (32%), Positives = 320/610 (51%), Gaps = 47/610 (7%)
Frame = +2
Query: 45 YKEGDFVPFYANKVGPFHNPSETYRYFDLPFCSPENVEEKKEDLGEVLNGDRLVVAPYKL 104
+++GD + NK+ Y Y+ LP+C+PE + + E+LGEVL GDR+ + Y
Sbjct: 128 FQKGDTLQVKVNKLSSTKTQLP-YTYYSLPYCTPEKILDSAENLGEVLRGDRIENSRYVF 304
Query: 105 EFLIDKKPESICQKM-LTRKEVAQFRHAVLKDYFYQMYYDDLPIWGFLGRFETDEKDVD- 162
+ + +C+K+ L K F+ + +Y M D+LP+ + R + D
Sbjct: 305 KMREPQMCNVVCKKLKLDAKTAKAFKEKIDDEYRVNMILDNLPLVVPIKRVDQDSTVYQL 484
Query: 163 ------------TNEATVYLFRNVHFEILYNND------RIIDVFVKN------------ 192
+ E ++ ++ F + Y+ D RI+ VK
Sbjct: 485 GFHVGLKGQYSGSKEEKFFIHNHLAFTVKYHRDSLTEAARIVGFEVKPFSVKHEYEGKWD 664
Query: 193 --------DPNA---VVDLTEDREVN----VDFTYSVKWIETDIPFEKRLEKYSQTSSLS 237
DP+A VV+ +EV + FTY V+++E+D+ + R + Y L
Sbjct: 665 EKTRLSTCDPHAKHTVVNSNTPQEVEEGKEIIFTYDVEFLESDVKWASRWDAYL----LM 832
Query: 238 HHLEIHWFSIINSCVTVLLLTGFLAMILMRVLKNDFVKFTPDEEALDDQEETGWKYIHGD 297
+ +IHWFSI+NS + VL L+G +AMI++R L D K+ E + QEETGWK +HGD
Sbjct: 833 NDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGD 1012
Query: 298 VFRYPRFKSLFAAALGTGTQLFTLVIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIA 357
VFR P L +GTG Q F +++ + A++G P NRG L TA+++++ A
Sbjct: 1013VFRPPNNSDLLCVYVGTGVQFFGMILVTMLFAVLGFLSPSNRGGLMTAMLLLWVFMGIFA 1192
Query: 358 SYSAASFYYMIEGKNWVKILVLTGSLFSGPLFFTFSFLNTVAVAYNSTAALPFGTIVVIF 417
Y++A Y M +G W KI + T LF + F LN + S+ A+PFGT+ +
Sbjct: 1193GYASARLYKMFKGTEWKKISLRTAVLFPASVSAIFFVLNGLIWGQKSSGAVPFGTMFALI 1372
Query: 418 LIWTLVTSPLLVLGGIAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFS 477
+W ++ PL+++GG G + + P +TNK PR+IP+ WY + + G LPF
Sbjct: 1373FLWFGISVPLVLVGGYVGFRKPA-IENPVKTNKIPRQIPEQAWYMNPAFSVLIGGILPFG 1549
Query: 478 AIFIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSF 537
A+FIEL++I S+W +Q Y I+ LF+VF+IL+I A V L YFQL +E++ WWWRS
Sbjct: 1550AVFIELFFILTSIWLNQFYYIFGFLFLVFVILVITCAEITVVLCYFQLCSEEYLWWWRS* 1729
Query: 538 LCGGSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFV 597
L GS+ L+++ Y F++ + +++ + +FGYM Y FF++ GT+ F A F
Sbjct: 1730LTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMFIASYAFFVVTGTIGFYACFWFT 1909
Query: 598 RHIYRSLKCE 607
R IY S+K +
Sbjct: 1910RLIYSSVKID 1939
>TC92295 weakly similar to GP|6664322|gb|AAF22904.1| T27G7.5 {Arabidopsis
thaliana}, partial (23%)
Length = 1171
Score = 356 bits (913), Expect = 2e-98
Identities = 172/371 (46%), Positives = 244/371 (65%)
Frame = +1
Query: 36 VTSDASDHRYKEGDFVPFYANKVGPFHNPSETYRYFDLPFCSPENVEEKKEDLGEVLNGD 95
VT+ S+H Y GD VPF+ NKVGPF+NPSETY Y++LPFC P+ + +K E LGEVLNGD
Sbjct: 67 VTASTSNHIYNVGDIVPFFVNKVGPFNNPSETYEYYELPFCKPDPIVKKIESLGEVLNGD 246
Query: 96 RLVVAPYKLEFLIDKKPESICQKMLTRKEVAQFRHAVLKDYFYQMYYDDLPIWGFLGRFE 155
RL Y+ +F DK E++CQK LT E+ + A+ ++++Q Y DDLP WGF+G+ E
Sbjct: 247 RLSNGLYEFKFREDKIDETLCQKKLTIDEIDILKQAINSEFYFQFYLDDLPFWGFVGKVE 426
Query: 156 TDEKDVDTNEATVYLFRNVHFEILYNNDRIIDVFVKNDPNAVVDLTEDREVNVDFTYSVK 215
+ ++ YLF +V F++LYN +++++V DPN VD+T+D ++V FTYSV
Sbjct: 427 DESLIHGGGGSSYYLFTHVQFDVLYNGNQVVEVKAFGDPNRAVDITKDVGIDVKFTYSVI 606
Query: 216 WIETDIPFEKRLEKYSQTSSLSHHLEIHWFSIINSCVTVLLLTGFLAMILMRVLKNDFVK 275
W +++ FE R+E+YS+ S L + +IHWFS INS V +LLL G LA++ R LK+D K
Sbjct: 607 WNASELRFENRMERYSKASWLFVYRQIHWFSFINSIVIILLLIGLLALLYTRHLKSDLKK 786
Query: 276 FTPDEEALDDQEETGWKYIHGDVFRYPRFKSLFAAALGTGTQLFTLVIFIFMLALVGVFY 335
++ A ++ E GWK IHGDVF+ P SLF A +GTGTQL L+ + LA +G Y
Sbjct: 787 YS---SANEEDREVGWKSIHGDVFKPPPHLSLFFAVVGTGTQLLILLCVLLFLAFIGTLY 957
Query: 336 PYNRGALFTALVVIYALTSGIASYSAASFYYMIEGKNWVKILVLTGSLFSGPLFFTFSFL 395
PY+RG L + +V+++ L+S A YS ASF+ W K + L G L+ GP+F TFS L
Sbjct: 958 PYSRGGLSSWIVLLFTLSSVFAGYSTASFHGQFAENGWEKSVGLAGILYIGPVFVTFSIL 1137
Query: 396 NTVAVAYNSTA 406
N +A++Y TA
Sbjct: 1138NIIAISYRVTA 1170
>TC87740 similar to PIR|D84431|D84431 probable endosomal protein [imported]
- Arabidopsis thaliana, partial (39%)
Length = 989
Score = 337 bits (865), Expect = 6e-93
Identities = 168/271 (61%), Positives = 209/271 (76%), Gaps = 1/271 (0%)
Frame = +2
Query: 12 YMEKSMTCLVSAIVILCCFCCINYVTSDASDHRYKEGDFVPFYANKVGPFHNPSETYRYF 71
Y + SM + + + IL F + V SD+SD RYKEGD VP +ANKVGPFHNPSETYRYF
Sbjct: 179 YYQSSMAKM-NPLFILAFFFFFSTVRSDSSDKRYKEGDLVPLFANKVGPFHNPSETYRYF 355
Query: 72 DLPFCSPENVEEKKEDLGEVLNGDRLVVAPYKLEFLIDKKPESICQKMLTRKEVAQFRHA 131
DLPFC P++++EKKE LGEVLNGDRLV APY+LEF DK S+C+K LT++EVA FR A
Sbjct: 356 DLPFCIPDHLKEKKEALGEVLNGDRLVSAPYQLEFQKDKDSLSVCKKTLTKEEVANFRSA 535
Query: 132 VLKDYFYQMYYDDLPIWGFLGRFETDEKDVDTNEATVYLFRNVHFEILYNNDRIIDVFVK 191
V KDY++QMYYDDLPIWGF+G+ D++ D ++ YL++++HF+I YN DR+I++ V+
Sbjct: 536 VRKDYYFQMYYDDLPIWGFIGK--VDKEGKDPSDYRYYLYKHIHFDIFYNKDRVIEINVR 709
Query: 192 NDPNAVVDLTEDR-EVNVDFTYSVKWIETDIPFEKRLEKYSQTSSLSHHLEIHWFSIINS 250
DPNA+VD+T + F+ ET+ PFEKR++KYSQ SSL HHLEIHWFSIINS
Sbjct: 710 TDPNALVDVTRGQ*S*CRVFSIL*NGKETNTPFEKRMDKYSQPSSLPHHLEIHWFSIINS 889
Query: 251 CVTVLLLTGFLAMILMRVLKNDFVKFTPDEE 281
CVTVLLLTGFLA ILMRVLKNDFVK+ DEE
Sbjct: 890 CVTVLLLTGFLATILMRVLKNDFVKYAHDEE 982
>TC86059 similar to GP|13430446|gb|AAK25845.1 putative multispanning membrane
protein {Arabidopsis thaliana}, partial (93%)
Length = 2358
Score = 199 bits (505), Expect(2) = 5e-81
Identities = 91/243 (37%), Positives = 143/243 (58%)
Frame = +1
Query: 365 YYMIEGKNWVKILVLTGSLFSGPLFFTFSFLNTVAVAYNSTAALPFGTIVVIFLIWTLVT 424
Y M +G W +I + T +LF + F LN + S+ A+PFGT+ + +W ++
Sbjct: 1357 YKMFKGSEWKRIALRTATLFPAIVSVIFFILNALIWGQKSSGAVPFGTMFALVFLWFGIS 1536
Query: 425 SPLLVLGGIAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFIELY 484
PL+ +G G + + P +TNK PR+IP+ WY + + G LPF A+FIEL+
Sbjct: 1537 VPLVFVGSYIGFKKPA-IENPVKTNKIPRQIPEQAWYMNPAFSVLIGGILPFGAVFIELF 1713
Query: 485 YIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTG 544
+I S+W +Q Y I+ LF+VFIIL++ A + L YFQL +ED+ WWWRS+L GS+
Sbjct: 1714 FILTSIWLNQFYYIFGFLFLVFIILVVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSA 1893
Query: 545 LFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSL 604
L+++ Y F++ + +++ + F+FGYM Y FF++ GT+ F A F R IY S+
Sbjct: 1894 LYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSV 2073
Query: 605 KCE 607
K +
Sbjct: 2074 KID 2082
Score = 121 bits (303), Expect(2) = 5e-81
Identities = 73/200 (36%), Positives = 106/200 (52%), Gaps = 11/200 (5%)
Frame = +2
Query: 159 KDVDTNEATVYLFRNVHFEILYNNDRIIDV----FVKNDPNA---VVDLTEDREVN---- 207
+DV T A + F F + + D D DP+A VV+ +EV
Sbjct: 716 RDVQTESARIVGFEVKPFSVKHEYDGKWDDKKTRLTTCDPHAKHTVVNNNSPQEVEENKE 895
Query: 208 VDFTYSVKWIETDIPFEKRLEKYSQTSSLSHHLEIHWFSIINSCVTVLLLTGFLAMILMR 267
+ FTY V + E+D+ + R + Y L + +IHWFSI+NS + VL L+G +AMI++R
Sbjct: 896 IIFTYDVDFQESDVKWASRWDAYL----LMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLR 1063
Query: 268 VLKNDFVKFTPDEEALDDQEETGWKYIHGDVFRYPRFKSLFAAALGTGTQLFTLVIFIFM 327
L D K+ E + QEETGWK +HGDVFR P L +GTG Q F +++ +
Sbjct: 1064TLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMI 1243
Query: 328 LALVGVFYPYNRGALFTALV 347
A++G P NRG L TA++
Sbjct: 1244FAILGFLSPSNRGGLMTAML 1303
Score = 48.5 bits (114), Expect = 7e-06
Identities = 29/143 (20%), Positives = 67/143 (46%)
Frame = +1
Query: 5 VSVCGSVYMEKSMTCLVSAIVILCCFCCINYVTSDASDHRYKEGDFVPFYANKVGPFHNP 64
+S+ ++ +S+ + S +++ ++ + + +GD + NK+
Sbjct: 154 ISISNAMAFLRSL--VFSTLLLSLLHTAFSFYLPGVAPQDFFKGDVLQVKVNKLTSTKTQ 327
Query: 65 SETYRYFDLPFCSPENVEEKKEDLGEVLNGDRLVVAPYKLEFLIDKKPESICQKMLTRKE 124
Y ++ LP+ +P+ +++ E+LGEVL GDR+ + Y + + + + L K
Sbjct: 328 LP-YSFYSLPYPAPKKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNVVGKIKLDAKN 504
Query: 125 VAQFRHAVLKDYFYQMYYDDLPI 147
+F+ + +Y M D+LP+
Sbjct: 505 AKEFKEKINDEYRVNMILDNLPL 573
>TC85726 similar to GP|15450755|gb|AAK96649.1 T5E21.14/T5E21.14 {Arabidopsis
thaliana}, partial (34%)
Length = 773
Score = 292 bits (748), Expect = 2e-79
Identities = 141/236 (59%), Positives = 179/236 (75%), Gaps = 1/236 (0%)
Frame = +1
Query: 9 GSVYMEKSM-TCLVSAIVILCCFCCINYVTSDASDHRYKEGDFVPFYANKVGPFHNPSET 67
G +EK M + V I +L +V SDASDHRY +GD VP YANKVGPFHNPSET
Sbjct: 67 GKKKVEKKMGSSSVIWIHLLISLLAATHVRSDASDHRYSDGDAVPLYANKVGPFHNPSET 246
Query: 68 YRYFDLPFCSPENVEEKKEDLGEVLNGDRLVVAPYKLEFLIDKKPESICQKMLTRKEVAQ 127
YRY DLPFC + +EK E LGEVLNGDRLV APY+L+F +K +C+K LTR++V Q
Sbjct: 247 YRYLDLPFCVTGHEKEKTEALGEVLNGDRLVSAPYELKFKKEKDSTVVCKKTLTREQVNQ 426
Query: 128 FRHAVLKDYFYQMYYDDLPIWGFLGRFETDEKDVDTNEATVYLFRNVHFEILYNNDRIID 187
FR AV KDY++QMYYDDLPIWGF+G + + K D +E +L++++ F++LYN DR+I+
Sbjct: 427 FREAVKKDYYFQMYYDDLPIWGFIGTVDKEGK-ADPSEYKYFLYKHIQFDVLYNKDRVIE 603
Query: 188 VFVKNDPNAVVDLTEDREVNVDFTYSVKWIETDIPFEKRLEKYSQTSSLSHHLEIH 243
+ + DP++VVDLTEDREV+V+F Y+VKW ETDIPFEKR+EKYSQ+SSL HHLEIH
Sbjct: 604 ISARMDPHSVVDLTEDREVDVEFMYTVKWKETDIPFEKRMEKYSQSSSLPHHLEIH 771
>TC85725 homologue to PIR|D84431|D84431 probable endosomal protein
[imported] - Arabidopsis thaliana, partial (23%)
Length = 713
Score = 225 bits (573), Expect = 4e-59
Identities = 103/114 (90%), Positives = 111/114 (97%)
Frame = +2
Query: 494 QIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCMF 553
+IYTIYSILFIVFIILLIVTAF VALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYC++
Sbjct: 77 RIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCLY 256
Query: 554 FYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
+Y+ARSDMSGFMQTSFFFGYMACICYGFFLMLG+V FRASL+FVRHIYRS+KCE
Sbjct: 257 YYYARSDMSGFMQTSFFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 418
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/30 (56%), Positives = 21/30 (69%)
Frame = +3
Query: 356 IASYSAASFYYMIEGKNWVKILVLTGSLFS 385
IA Y+A SFY +EG NWV+ L+LTG S
Sbjct: 3 IAGYTATSFYIQLEGTNWVRNLLLTGFTLS 92
>AW774550 homologue to PIR|D84431|D84 probable endosomal protein [imported] -
Arabidopsis thaliana, partial (28%)
Length = 701
Score = 205 bits (521), Expect = 5e-53
Identities = 102/137 (74%), Positives = 115/137 (83%), Gaps = 9/137 (6%)
Frame = -3
Query: 236 LSHHLEIHWFSIINSCVTVLLLTGFLAMILMRVLKNDFVKFTPDEEALDDQEETGWKYIH 295
L HHLEIHWFSIINSCVTVLLLTGFLA ILMRVLKNDF+K+ DEEA DDQEETGWKYI
Sbjct: 699 LPHHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFMKYAQDEEAADDQEETGWKYIX 520
Query: 296 GDVFRYPRFKSLFAAALGTGTQLFTLVIFIFMLALVGVFYPYNRGALFTALV-------- 347
GDVFR+P+FKS+FAAALG+GTQLFTL IFIFMLALVGVFYPYNRGALFTA +
Sbjct: 519 GDVFRFPKFKSIFAAALGSGTQLFTLTIFIFMLALVGVFYPYNRGALFTACIITTQDQIC 340
Query: 348 -VIYALTSGIASYSAAS 363
V+ L S +A++ A++
Sbjct: 339 LVLCKLRSSLATWPASA 289
Score = 117 bits (292), Expect = 2e-26
Identities = 50/58 (86%), Positives = 57/58 (98%)
Frame = -2
Query: 550 YCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
YC+++Y+ARSDMSGFMQTSFFFGYMACICYGFFLMLG+V FRASL+FVRHIYRS+KCE
Sbjct: 376 YCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 203
>TC93075 weakly similar to GP|15010758|gb|AAK74038.1 At1g08350/T27G7_4
{Arabidopsis thaliana}, partial (24%)
Length = 908
Score = 176 bits (447), Expect = 2e-44
Identities = 78/136 (57%), Positives = 106/136 (77%)
Frame = +3
Query: 472 GFLPFSAIFIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHE 531
GF+PFSA+ ++L+ ++AS G++IYT+ IL I ++++ A N++LTY QL+ EDHE
Sbjct: 21 GFVPFSAMSLQLHQVYASCGGYKIYTLPGILAATLITVIVIIALVNISLTYVQLSVEDHE 200
Query: 532 WWWRSFLCGGSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFR 591
WWWRS LCGGST +F++GY ++FY ARS MSGF+Q SFF GY ACICY FFL+ G +SFR
Sbjct: 201 WWWRSVLCGGSTAIFMFGYGIYFY-ARSRMSGFLQLSFFIGYNACICYAFFLIFGAISFR 377
Query: 592 ASLIFVRHIYRSLKCE 607
SL+FVRHIY ++K E
Sbjct: 378 VSLLFVRHIYHNVKRE 425
>TC89088 homologue to PIR|H85135|H85135 hypothetical protein AT4g12650
[imported] - Arabidopsis thaliana, partial (53%)
Length = 1275
Score = 169 bits (427), Expect = 4e-42
Identities = 88/284 (30%), Positives = 146/284 (50%), Gaps = 5/284 (1%)
Frame = +2
Query: 329 ALVGVFYPYNRGALFTALVVIYALTSGIASYSAASFYYMIEG--KNWVKILVLTGSLFSG 386
A +G P +RG L T ++++Y + A Y + + +I+G + W + F G
Sbjct: 5 AALGFMSPASRGMLLTGMIILYLILGIAAGYVSVRLWRIIKGTSEGWRSVSWSAACFFPG 184
Query: 387 PLFFTFSFLNTVAVAYNSTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQSEFQAPC 446
F + LN + NST A+P +F +W ++ PL ++GG G + + P
Sbjct: 185 IAFVILTVLNFILWNSNSTGAIPISLYFELFFLWFCISVPLTLIGGFMGTKGEP-IEYPV 361
Query: 447 RTNKYPREIP--KLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASVWGHQIYTIYSILFI 504
RTN+ PREIP K P + L AG LPF +FIEL++I +S+W + Y ++ L +
Sbjct: 362 RTNQIPREIPARKYPSWLLVLG----AGTLPFGTLFIELFFILSSIWLGRFYYVFGFLLV 529
Query: 505 VFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCM-FFYHARSDMSG 563
V ++L++V A +V LTY L ED WWW++F GS L+++ Y + + +SG
Sbjct: 530 VLLLLIVVCAEVSVVLTYMHLCVEDWRWWWKAFYASGSVALYVFLYSINYLVFDLQSLSG 709
Query: 564 FMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
+ + + GY + L GT+ F S FV +++ S+K +
Sbjct: 710 PVSATLYLGYSLLMAIAIMLSTGTIGFLMSFYFVHYLFSSVKID 841
>TC82814 homologue to GP|10176814|dbj|BAB10022. endosomal protein-like
{Arabidopsis thaliana}, partial (36%)
Length = 1050
Score = 162 bits (411), Expect = 3e-40
Identities = 83/238 (34%), Positives = 132/238 (54%), Gaps = 1/238 (0%)
Frame = +3
Query: 371 KNWVKILVLTGSLFSGPLFFTFSFLNTVAVAYNSTAALPFGTIVVIFLIWTLVTSPLLVL 430
K WV + F G FF + LN + ST A+PF V++ L+W ++ PL ++
Sbjct: 21 KGWVSVAWKAACFFPGIAFFILTILNFLLWGSQSTGAIPFSLFVILLLLWFCISVPLTLV 200
Query: 431 GGIAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASV 490
GG G + + P RTN+ PREIP+ + L + AG LPF +FIEL++I +S+
Sbjct: 201 GGYFGAKAP-HLEYPVRTNQIPREIPQQRYPSWLL--VLGAGTLPFGTLFIELFFIMSSI 371
Query: 491 WGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGY 550
W ++Y ++ LFIV I+L++V A ++ LTY L ED WWW+SF GS L+I+ Y
Sbjct: 372 WMGRVYYVFGFLFIVLILLVVVCAEVSLVLTYMHLCVEDWRWWWKSFFASGSVALYIFLY 551
Query: 551 CM-FFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
+ + ++SG + + + GY + L+ GTV F +S FV +++ S+K +
Sbjct: 552 SINYLVFDLKNLSGPVSATLYLGYSLFMVLAIMLVTGTVGFLSSFWFVYYLFSSVKLD 725
>BG646208 homologue to GP|9294023|dbj multispanning membrane protein-like
{Arabidopsis thaliana}, partial (24%)
Length = 498
Score = 123 bits (309), Expect = 2e-28
Identities = 61/146 (41%), Positives = 85/146 (57%)
Frame = +2
Query: 241 EIHWFSIINSCVTVLLLTGFLAMILMRVLKNDFVKFTPDEEALDDQEETGWKYIHGDVFR 300
+IHWFSIINS + VL L+G +AMI+MR L D + + + QEETGWK +HGDVFR
Sbjct: 56 QIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLDTQDEAQEETGWKLVHGDVFR 235
Query: 301 YPRFKSLFAAALGTGTQLFTLVIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIASYS 360
P +L +GTG Q+F + + + AL+G P N G L TA+V+++ A YS
Sbjct: 236 PPINSNLLCVYVGTGVQIFGMTLVTMIFALLGFLSPSNGGGLMTAMVLLWVFMGLFAGYS 415
Query: 361 AASFYYMIEGKNWVKILVLTGSLFSG 386
+A Y M +G W + + T SG
Sbjct: 416 SARLYKMFKGTEWKRNTLKTAVYVSG 493
>BG648902 homologue to GP|1323798|gb| transposase {Plasmid pRL1063a}, partial
(25%)
Length = 750
Score = 102 bits (253), Expect = 6e-22
Identities = 50/119 (42%), Positives = 71/119 (59%)
Frame = +2
Query: 247 IINSCVTVLLLTGFLAMILMRVLKNDFVKFTPDEEALDDQEETGWKYIHGDVFRYPRFKS 306
+INS + VL L+G +AMI+MR L D + + + QEETGWK +HGDVFR P +
Sbjct: 8 LINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLDTQDEAQEETGWKLVHGDVFRPPINSN 187
Query: 307 LFAAALGTGTQLFTLVIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIASYSAASFY 365
L +GTG Q+F + + + AL+G P NRG L TA+V+++ A YS+A Y
Sbjct: 188 LLCVYVGTGVQIFGMTLVTMIFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYSSARLY 364
>AW560291 homologue to GP|9294023|dbj multispanning membrane protein-like
{Arabidopsis thaliana}, partial (16%)
Length = 657
Score = 99.8 bits (247), Expect = 3e-21
Identities = 43/103 (41%), Positives = 67/103 (64%)
Frame = -2
Query: 505 VFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCMFFYHARSDMSGF 564
VFIILLI A V L YFQL +ED+ WWWR++L GS+ ++++ Y +F++ + +++
Sbjct: 656 VFIILLITCAEITVVLCYFQLCSEDYNWWWRAYLTAGSSAVYLFLYSIFYFFTKLEITKL 477
Query: 565 MQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
+ +FGYM + Y FF++ GT+ F A FVR IY S+K +
Sbjct: 476 VSGILYFGYMIIVSYAFFVVTGTIGFYACFWFVRKIYSSVKID 348
>CB891612 similar to GP|5257264|dbj ESTs AU064813(E40579) D24600(R2232)
correspond to a region of the predicted gene.~Similar to
Human, partial (19%)
Length = 392
Score = 61.2 bits (147), Expect = 1e-09
Identities = 33/129 (25%), Positives = 60/129 (45%), Gaps = 5/129 (3%)
Frame = +1
Query: 263 MILMRVLKNDFVKFTP---DEEALDDQEETGWKYIHGDVFRYPRFKSLFAAALGTGTQLF 319
+I +R ++ D ++ + +A ++E +GWK + GDVFR P L +G G Q+
Sbjct: 1 VIFLRTVRRDLARYEELDKETQAQMNEELSGWKLVVGDVFREPGCSKLLCVMVGDGVQIL 180
Query: 320 TLVIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIASYSAASFYYMIEG--KNWVKIL 377
+ + A +G P +RG L T ++++Y + Y + + I+G + W I
Sbjct: 181 GMAGVTIVFAALGFMSPASRGMLLTGMIILYLFLGIASGYVSVRLWRTIKGTSEGWRSIS 360
Query: 378 VLTGSLFSG 386
F G
Sbjct: 361 WFAACFFPG 387
>AW691228 similar to PIR|H96592|H96 probable multispanning membrane protein
[imported] - Arabidopsis thaliana, partial (15%)
Length = 403
Score = 45.1 bits (105), Expect = 8e-05
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 15 KSMTCLVSAIVILCCFCCIN-YVTSDASDHRYKEGDFVPFYANKVGPFHNPSETYRYFDL 73
+S T V + IL F ++ + + ++ GD + NK+ Y Y+ L
Sbjct: 54 RSTTTTVYFLTILFLFSSVHSFYLPGVAPRDFQTGDALYVKVNKLSSTKTQLP-YDYYYL 230
Query: 74 PFCSPENVEEKKEDLGEVLNGDRLVVAPYKLEFLIDKKPESICQKMLTRKEVAQFR 129
+C P + E+LGEVL GDR+ + Y ++ C K+L + F+
Sbjct: 231 KYCKPSKIVNSAENLGEVLRGDRIENSIYTFHMRKEQSCTVACHKILDAESAKNFK 398
>TC86034 similar to GP|6815067|dbj|BAA90354.1 ESTs AU082210(C53655)
AU056546(S20671) AU056545(S20671) correspond to a
region of the predicted, partial (42%)
Length = 2412
Score = 32.3 bits (72), Expect = 0.54
Identities = 34/127 (26%), Positives = 51/127 (39%)
Frame = -2
Query: 473 FLPFSAIFIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEW 532
FL FS I ++ S H + S++ ILL++ G V L + +
Sbjct: 443 FLFFSVI---VFTTTVSFHRHSLLRHGSVV*SFTAILLLLVF*GFVFSLLIILFFFCYLF 273
Query: 533 WWRSFLCGGSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRA 592
+W F L + C+FF F+ FFFGY + +GF L G R+
Sbjct: 272 FWFFFTFTFVLRLIFFNRCVFF---------FLCCWFFFGYFFLLWFGFSLFGGFRVRRS 120
Query: 593 SLIFVRH 599
L F+ H
Sbjct: 119 KLSFLSH 99
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.329 0.143 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,647,731
Number of Sequences: 36976
Number of extensions: 340845
Number of successful extensions: 3575
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 3440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3539
length of query: 607
length of database: 9,014,727
effective HSP length: 102
effective length of query: 505
effective length of database: 5,243,175
effective search space: 2647803375
effective search space used: 2647803375
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC149209.11