BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149206.7 + phase: 0
(310 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG647158 273 8e-74
BI310236 similar to SP|Q9UZC8|RA50_ DNA double-strand break repa... 202 2e-52
BQ148855 homologue to SP|P12012|GNTP_ Gluconate permease. {Bacil... 159 2e-39
TC82470 homologue to GP|23497460|gb|AAN37003.1 hypothetical prot... 118 3e-27
AW287980 115 2e-26
BG647533 83 2e-16
BF632236 weakly similar to GP|22832113|gb CG32662-PA {Drosophila... 80 8e-16
BI271989 homologue to GP|15981123|emb putative membrane protein ... 64 6e-11
BQ146529 57 9e-09
BI309353 homologue to PIR|T31613|T316 hypothetical protein Y50E8... 54 8e-08
CB891165 homologue to PIR|H82068|H820 RNA polymerase-associated ... 50 1e-06
TC84423 similar to PIR|F84730|F84730 probable myosin heavy chain... 46 2e-05
CA858495 45 4e-05
TC92479 similar to GP|9759160|dbj|BAB09716.1 contains similarity... 42 3e-04
TC88489 similar to GP|14334978|gb|AAK59666.1 unknown protein {Ar... 40 9e-04
TC89336 weakly similar to GP|21554135|gb|AAM63215.1 unknown {Ara... 40 9e-04
TC84723 similar to GP|16945387|emb|CAD11800. conserved hypotheti... 40 0.001
BF003743 similar to GP|17016406|gb| wsv008 {shrimp white spot sy... 40 0.001
TC88896 weakly similar to GP|6728968|gb|AAF26966.1| unknown prot... 39 0.003
TC91751 similar to GP|2739382|gb|AAC14505.1| unknown protein {Ar... 39 0.003
>BG647158
Length = 764
Score = 273 bits (697), Expect = 8e-74
Identities = 161/219 (73%), Positives = 167/219 (75%), Gaps = 7/219 (3%)
Frame = +3
Query: 99 FEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELKENQIEV 158
FE RV EFQS+EEEFK +VK +FE K E+FE KMQQ ENQ EDNLKSVKALELKENQIEV
Sbjct: 6 FERRVKEFQSEEEEFKGRVK-MFETKVEEFEGKMQQIENQTEDNLKSVKALELKENQIEV 182
Query: 159 QIKDLKSKLNNFGGQPKELELTEKQHDEEKEFDTSYMDD------DGASEEIDILDNLRE 212
QIKDL DEEKEFD S MDD DG SEEI ILDNLRE
Sbjct: 183 QIKDL--------------------FDEEKEFDISNMDDQFSITIDGTSEEIGILDNLRE 302
Query: 213 SSDPAKIVLDIILNPIIPLPKKGDKAVIIDDESRIYLLEKLMTISPN-IKPCVRDEALKL 271
SSDPAK+VLDIILNP IPLPKKGDKAVII DE IYLLE+LM ISPN IK CVRDEALKL
Sbjct: 303 SSDPAKLVLDIILNPTIPLPKKGDKAVII-DEGWIYLLEQLMIISPNIIKSCVRDEALKL 479
Query: 272 ARELKANMKENTENYLEVLGFLLILSIYGLHTYFDEDEV 310
A ELKANMKENTEN LE LGFLLILSIYGL YFDEDEV
Sbjct: 480 ACELKANMKENTENSLEALGFLLILSIYGLVNYFDEDEV 596
Score = 35.0 bits (79), Expect = 0.037
Identities = 22/85 (25%), Positives = 46/85 (53%)
Frame = +3
Query: 23 ERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEK 82
ERR++ + + E+ ++ ET+V+EFE G++ + E++ + ++ E ++
Sbjct: 9 ERRVKEFQSEEEEFKGRVKMFETKVEEFE-------GKMQQIENQTEDNLKSVKALELKE 167
Query: 83 TNFERRQKEFESKEKEFEIRVMEFQ 107
E + K+ +EKEF+I M+ Q
Sbjct: 168 NQIEVQIKDLFDEEKEFDISNMDDQ 242
>BI310236 similar to SP|Q9UZC8|RA50_ DNA double-strand break repair rad50
ATPase. {Pyrococcus abyssi}, partial (2%)
Length = 819
Score = 202 bits (513), Expect = 2e-52
Identities = 123/256 (48%), Positives = 168/256 (65%), Gaps = 20/256 (7%)
Frame = +2
Query: 57 LDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQ 116
L GQV EF SK+ +L+ L++ ES+K FE + KEFESKEK E++V E +SKE EF+ Q
Sbjct: 20 LIGQVKEFYSKEKQLDSQLKELESKKKLFECQVKEFESKEKHHEVQVKERESKEREFEGQ 199
Query: 117 VKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIKDLKSKLNNFGGQPKE 176
VK L E++++ F+ ++++F+++ + LE KEN+ + ++K+L K F G K+
Sbjct: 200 VKEL-ESRKKHFKSQVEEFKSKEKQLEGRWSELESKENKFKAKVKELNLKEKQFEGLVKD 376
Query: 177 LELTEKQHDEEKEFDTSYMDDD------GASEEID--------------ILDNLRESSDP 216
+K DEEKE SYMDD G S ++D IL NL+ESSDP
Sbjct: 377 PASRKKYIDEEKESVESYMDDQSSRAFGGRSLQLDTSEKTDGVESLFNSILVNLQESSDP 556
Query: 217 AKIVLDIILNPIIPLPKKGDKAVIIDDESRIYLLEKLMTISPNIKPCVRDEALKLARELK 276
+K+VL++ILNPIIP +KGD AV+I D +IYLLE+LM ISP+IKPCVR EALKLA +LK
Sbjct: 557 SKLVLEMILNPIIPQWEKGDNAVVIVD-YQIYLLEQLMRISPDIKPCVRKEALKLAFDLK 733
Query: 277 ANMKENTENYLEVLGF 292
ANM +NTEN L L F
Sbjct: 734 ANMNDNTENLLRFLAF 781
>BQ148855 homologue to SP|P12012|GNTP_ Gluconate permease. {Bacillus
subtilis}, partial (2%)
Length = 692
Score = 159 bits (401), Expect = 2e-39
Identities = 103/248 (41%), Positives = 159/248 (63%), Gaps = 1/248 (0%)
Frame = +3
Query: 54 KNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEF 113
+ +L+ +V EFESK+ E + +++ + F + ++F+S+EK+FE R E +SK+++F
Sbjct: 3 EKLLEDRVKEFESKEEEFKARMQNLKG----FVSQMEDFKSEEKQFEGRGKEPESKDKKF 170
Query: 114 KVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIK-DLKSKLNNFGG 172
K VK L + KE++F+ +M+ FE+ +K EL+E + + I+ +L ++L+
Sbjct: 171 KAHVKEL-KPKEKQFDGRMKGFESMPCKFDGKLKRPELREKKYDALIEPELGNQLSPVID 347
Query: 173 QPKELELTEKQHDEEKEFDTSYMDDDGASEEIDILDNLRESSDPAKIVLDIILNPIIPLP 232
+ + L+ +Q DE + FD DIL L+ SSDP+K+VLDII NPII
Sbjct: 348 ERSLMLLSSEQTDELELFDD------------DILGYLQGSSDPSKVVLDIIQNPIIKKC 491
Query: 233 KKGDKAVIIDDESRIYLLEKLMTISPNIKPCVRDEALKLARELKANMKENTENYLEVLGF 292
K GD A IIDD S I LLE+L ISP+I+P V++EA+KLA ++KAN+ +NTEN + LGF
Sbjct: 492 KIGDDAAIIDD-SHILLLEELRKISPDIRPHVKEEAMKLALDMKANISQNTENSVAGLGF 668
Query: 293 LLILSIYG 300
LL+LSIYG
Sbjct: 669 LLLLSIYG 692
>TC82470 homologue to GP|23497460|gb|AAN37003.1 hypothetical protein
{Plasmodium falciparum 3D7}, partial (8%)
Length = 1064
Score = 118 bits (295), Expect = 3e-27
Identities = 82/268 (30%), Positives = 140/268 (51%), Gaps = 54/268 (20%)
Frame = +2
Query: 2 LRKELASLKKSFAECNGQ-QVEERRLRSIKRDIEKCCEELENMETQVKE----FETEKNI 56
L+++L ++KSF + + QVEERRL+SIKRDIE+CCE+LEN + ++++ E K +
Sbjct: 119 LKEKLVLVEKSFEDIRSKTQVEERRLQSIKRDIEECCEDLENKKKEIRDVGRIIEARKKM 298
Query: 57 ---LDGQVNEFESKKGEL--------------------------------------EGLL 75
+D V +F +K+G+L + L+
Sbjct: 299 QGKIDECVKDFVAKEGQLGLMEDLIGEHKKELKTKELELRQVMDNISKQKELESQVKELV 478
Query: 76 RDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQF 135
D S++ +FE KE ESKE++ E R+ E + +E+EF+ ++ L E+KE F+ ++++
Sbjct: 479 NDLVSKQKHFESHIKELESKERQLEGRLKEHELEEKEFEGRMNEL-ESKERHFKSEVEEI 655
Query: 136 ENQVEDNLKSVKALELKENQIEVQIKDLKSKLNNFGGQPKELELTEKQHD--------EE 187
++ +K L KE Q+ Q+K+L+SK N F + KELE EKQH+ +E
Sbjct: 656 NAKLMPLKGQIKELASKEKQLNGQVKELESKKNQFENRIKELESKEKQHEGRVKEHASKE 835
Query: 188 KEFDTSYMDDDGASEEIDILDNLRESSD 215
+EF++ M+ + +I ES +
Sbjct: 836 REFESQVMEQQFKKKLFEIQVKALESKE 919
Score = 82.0 bits (201), Expect = 3e-16
Identities = 58/159 (36%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Frame = +2
Query: 4 KELASLKKSF-AECNGQQVEERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVN 62
KEL S ++ ++EE+ ++E + + +++V+E + L GQ+
Sbjct: 521 KELESKERQLEGRLKEHELEEKEFEGRMNELES---KERHFKSEVEEINAKLMPLKGQIK 691
Query: 63 EFESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFE 122
E SK+ +L G +++ ES+K FE R KE ESKEK+ E RV E SKE EF+ QV
Sbjct: 692 ELASKEKQLNGQVKELESKKNQFENRIKELESKEKQHEGRVKEHASKEREFESQVM---- 859
Query: 123 AKEEKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIK 161
E++F+ K+ FE QV KALE KENQ+ Q+K
Sbjct: 860 --EQQFKKKL--FEIQV-------KALESKENQLVDQMK 943
Score = 81.6 bits (200), Expect(2) = 6e-18
Identities = 48/124 (38%), Positives = 75/124 (59%)
Frame = +2
Query: 23 ERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEK 82
E + R K ++E+ +L ++ Q+KE +++ L+GQV E ESKK + E +++ ES++
Sbjct: 614 ESKERHFKSEVEEINAKLMPLKGQIKELASKEKQLNGQVKELESKKNQFENRIKELESKE 793
Query: 83 TNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDN 142
E R KE SKE+EFE +VME Q K++ F++QVK L E+K ENQ+ D
Sbjct: 794 KQHEGRVKEHASKEREFESQVMEQQFKKKLFEIQVKAL-ESK-----------ENQLVDQ 937
Query: 143 LKSV 146
+K V
Sbjct: 938 MKGV 949
Score = 30.8 bits (68), Expect = 0.69
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +3
Query: 67 KKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEE 126
K+ L+ R +KTN + KEF+SKE EFE ++ E + F ++ L E+K +
Sbjct: 873 KRNCLKSKSRR*SQKKTNL*TK*KEFKSKEMEFESQMKEMVLNQNHFDSRMMDL-ESKVK 1049
Query: 127 KFEVK 131
+ +K
Sbjct: 1050EHGLK 1064
Score = 26.2 bits (56), Expect(2) = 6e-18
Identities = 12/38 (31%), Positives = 21/38 (54%)
Frame = +3
Query: 147 KALELKENQIEVQIKDLKSKLNNFGGQPKELELTEKQH 184
K + KE + E Q+K++ N+F + +LE K+H
Sbjct: 942 KEFKSKEMEFESQMKEMVLNQNHFDSRMMDLESKVKEH 1055
>AW287980
Length = 532
Score = 115 bits (289), Expect = 2e-26
Identities = 66/101 (65%), Positives = 79/101 (77%)
Frame = +2
Query: 210 LRESSDPAKIVLDIILNPIIPLPKKGDKAVIIDDESRIYLLEKLMTISPNIKPCVRDEAL 269
L SSDP+K VLDII NPIIP KG+ VIIDD I LLE+LM ISP++KP VR+EA+
Sbjct: 20 LASSSDPSKDVLDIIQNPIIP-QCKGENVVIIDDH-HIDLLEQLMRISPHVKPHVREEAM 193
Query: 270 KLARELKANMKENTENYLEVLGFLLILSIYGLHTYFDEDEV 310
KLA +LKA + ENTEN + VLGFLL+LSIYGL + FDEDE+
Sbjct: 194 KLALKLKAYIGENTENPVPVLGFLLLLSIYGLVSSFDEDEI 316
>BG647533
Length = 423
Score = 82.8 bits (203), Expect = 2e-16
Identities = 49/89 (55%), Positives = 64/89 (71%)
Frame = +3
Query: 222 DIILNPIIPLPKKGDKAVIIDDESRIYLLEKLMTISPNIKPCVRDEALKLARELKANMKE 281
+II NPIIP G K + + + + +LM ISP++KP VR+EA+KLA +LKA + E
Sbjct: 6 NIIQNPIIP-QV*GRKML*LLMITTLICSNQLMRISPHVKPHVREEAMKLALKLKAYIGE 182
Query: 282 NTENYLEVLGFLLILSIYGLHTYFDEDEV 310
NTEN + VLGFLL+LSIYGL + FDEDEV
Sbjct: 183 NTENPVPVLGFLLLLSIYGLVSSFDEDEV 269
>BF632236 weakly similar to GP|22832113|gb CG32662-PA {Drosophila
melanogaster}, partial (3%)
Length = 522
Score = 80.5 bits (197), Expect = 8e-16
Identities = 45/124 (36%), Positives = 77/124 (61%)
Frame = +3
Query: 66 SKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKE 125
SK+ + ++ +S + E R KE E KEKE E RV E + + + F+ QV+ F++K+
Sbjct: 9 SKQKHIVSRMKKLDSNEKQHEARVKEHELKEKELEGRVKELELQNKHFESQVED-FKSKD 185
Query: 126 EKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIKDLKSKLNNFGGQPKELELTEKQHD 185
++ E + ++ E++ V+ LELKE Q+ ++K+L+S+L+ F GQ KE ELT KQ++
Sbjct: 186 KQIEERWKKLESKENQFKVKVQELELKEKQVAGRVKELESRLDKFDGQLKEPELTGKQYE 365
Query: 186 EEKE 189
K+
Sbjct: 366 AVKK 377
Score = 63.9 bits (154), Expect = 7e-11
Identities = 33/93 (35%), Positives = 59/93 (62%)
Frame = +3
Query: 44 ETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRV 103
E +VKE E ++ L+G+V E E + E + DF+S+ E R K+ ESKE +F+++V
Sbjct: 69 EARVKEHELKEKELEGRVKELELQNKHFESQVEDFKSKDKQIEERWKKLESKENQFKVKV 248
Query: 104 MEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFE 136
E + KE++ +VK L E++ +KF+ ++++ E
Sbjct: 249 QELELKEKQVAGRVKEL-ESRLDKFDGQLKEPE 344
Score = 33.5 bits (75), Expect = 0.11
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 18/99 (18%)
Frame = +3
Query: 20 QVEERRLRSIKRDIEKCCEELE----NMETQVKEFET-EKNI------LDGQVNEFESKK 68
+V+E L+ ++++E +ELE + E+QV++F++ +K I L+ + N+F+ K
Sbjct: 75 RVKEHELK--EKELEGRVKELELQNKHFESQVEDFKSKDKQIEERWKKLESKENQFKVKV 248
Query: 69 GELE-------GLLRDFESEKTNFERRQKEFESKEKEFE 100
ELE G +++ ES F+ + KE E K++E
Sbjct: 249 QELELKEKQVAGRVKELESRLDKFDGQLKEPELTGKQYE 365
Score = 28.5 bits (62), Expect = 3.4
Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Frame = +1
Query: 82 KTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVED 141
++N + + K+K ++ + K K ++++ +K +N +
Sbjct: 58 RSNMKPE*RSMN*KKKNSKVELRSSNYKISTLKAKLRI----SNQKISKLKNGGKNLSQK 225
Query: 142 NLKS---VKALELKENQIEVQIKDLKSKLNNFGG-------QPKELELTEKQHDEEKEFD 191
+ S ++L K ++++V+ ++L N Q ++ +K +EEKE
Sbjct: 226 RISSK*RCRSLS*KRSRLQVESRNLSQGWINLMDN*RSLS*QGNNMKPLKKYINEEKESV 405
Query: 192 TSYMDD------DGASEEIDILD 208
SYMDD DG S ++D+ D
Sbjct: 406 ASYMDDRLSPTIDGTSLQLDMSD 474
Score = 28.5 bits (62), Expect = 3.4
Identities = 21/67 (31%), Positives = 35/67 (51%), Gaps = 6/67 (8%)
Frame = +3
Query: 19 QQVEER--RLRSIKRDIEKCCEELENMETQV----KEFETEKNILDGQVNEFESKKGELE 72
+Q+EER +L S + + +ELE E QV KE E+ + DGQ+ E E + E
Sbjct: 186 KQIEERWKKLESKENQFKVKVQELELKEKQVAGRVKELESRLDKFDGQLKEPELTGKQYE 365
Query: 73 GLLRDFE 79
+ + ++
Sbjct: 366 AVKKIYQ 386
>BI271989 homologue to GP|15981123|emb putative membrane protein {Yersinia
pestis}, partial (6%)
Length = 711
Score = 64.3 bits (155), Expect = 6e-11
Identities = 46/127 (36%), Positives = 70/127 (54%), Gaps = 16/127 (12%)
Frame = +3
Query: 4 KELASLKKSFAECNGQQ-VEERRLRSIKRDIEKCCEELENMETQ---VKEFETEKNILDG 59
K SLK+ C ++ VEE+RL+SIKR +E+CC+ELEN +TQ V+ + + G
Sbjct: 309 KRFQSLKRDIGHCKRKRKVEEKRLQSIKRYVEECCKELENKKTQVSCVRRIDEAHEKMQG 488
Query: 60 QVNE----FESKKGELEGLLRDFESEKTNFERRQKEFE--------SKEKEFEIRVMEFQ 107
++ E F K+G+L L+ D E+ E + KE E SKEK+++ V E +
Sbjct: 489 KIEECIKDFVVKEGKLY-LMDDLIGERKP-ELKTKEIELNQVNGNISKEKQYKKXVKELE 662
Query: 108 SKEEEFK 114
S+E K
Sbjct: 663 SRENTLK 683
>BQ146529
Length = 259
Score = 57.0 bits (136), Expect = 9e-09
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +3
Query: 58 DGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEE 111
+GQV E +S K E EG + +F+S++ +FE R K FESKEK+FE V +F+S E
Sbjct: 69 EGQVKELQSNKEEFEGRVEEFKSQEKDFESRVKGFESKEKDFESXVRKFESCRE 230
Score = 54.7 bits (130), Expect = 4e-08
Identities = 26/61 (42%), Positives = 41/61 (66%)
Frame = +3
Query: 65 ESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAK 124
ESK + EG +++ +S K FE R +EF+S+EK+FE RV F+SKE++F+ V+ +
Sbjct: 48 ESKLXQYEGQVKELQSNKEEFEGRVEEFKSQEKDFESRVKGFESKEKDFESXVRKFESCR 227
Query: 125 E 125
E
Sbjct: 228 E 230
Score = 47.0 bits (110), Expect = 9e-06
Identities = 24/62 (38%), Positives = 38/62 (60%)
Frame = +3
Query: 39 ELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEKE 98
+L E QVKE ++ K +G+V EF+S++ +DFES FE ++K+FES ++
Sbjct: 54 KLXQYEGQVKELQSNKEEFEGRVEEFKSQE-------KDFESRVKGFESKEKDFESXVRK 212
Query: 99 FE 100
FE
Sbjct: 213 FE 218
Score = 37.0 bits (84), Expect = 0.010
Identities = 17/61 (27%), Positives = 34/61 (54%)
Frame = +3
Query: 20 QVEERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFE 79
+ E +L + +++ E E +V+EF++++ + +V FESK+ + E +R FE
Sbjct: 39 RTSESKLXQYEGQVKELQSNKEEFEGRVEEFKSQEKDFESRVKGFESKEKDFESXVRKFE 218
Query: 80 S 80
S
Sbjct: 219S 221
>BI309353 homologue to PIR|T31613|T316 hypothetical protein Y50E8A.i -
Caenorhabditis elegans, partial (1%)
Length = 692
Score = 53.9 bits (128), Expect = 8e-08
Identities = 25/47 (53%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = +2
Query: 2 LRKELASLKKSFAECNGQQ-VEERRLRSIKRDIEKCCEELENMETQV 47
L+K+L L++ F EC +Q +EE+RL+SIKRD E+CC+EL+N + QV
Sbjct: 443 LKKDLTLLEELFVECKWKQKLEEKRLQSIKRDTEECCKELQNKKNQV 583
>CB891165 homologue to PIR|H82068|H820 RNA polymerase-associated protein HepA
VC2506 [imported] - Vibrio cholerae, partial (1%)
Length = 692
Score = 50.1 bits (118), Expect = 1e-06
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Frame = -2
Query: 5 ELASLKKSFAECNGQQVEERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEF 64
EL + EC E+ ++ + ++K ++N+ K F KN+++ +N
Sbjct: 652 ELQQQLHTSLECIKLATNEKVSPNVVKLVQKMTSFIQNLS---KNFVMTKNVVEDHINAL 482
Query: 65 ESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAK 124
K+ +L L+RD + +K + + + +FE + K V E + EE+ ++ V+ +
Sbjct: 481 R-KREKLVQLMRDGKKQKKSMMKEKSQFEDEAKRL---VEEGEKVEEKIRILVEQKNSIE 314
Query: 125 EEKFEVK--MQQFENQ---VEDNLKSVKALELKENQIEVQIKDLKSKLNNFGGQPKELEL 179
EK ++K M++ E++ +ED K+ K E KE ++ KSK + K+
Sbjct: 313 LEKIKLKESMERHEDEKKKLEDEAKN-KITESKELMSSIK----KSKTSYDAALSKQ--- 158
Query: 180 TEKQHDEEKEFDTSYMDDDGASEEIDIL 207
+K D+ + F + D+ G+S ++L
Sbjct: 157 -QKMKDKWEGFRVDFADNYGSSSS*EVL 77
>TC84423 similar to PIR|F84730|F84730 probable myosin heavy chain [imported]
- Arabidopsis thaliana, partial (10%)
Length = 787
Score = 46.2 bits (108), Expect = 2e-05
Identities = 35/146 (23%), Positives = 67/146 (44%), Gaps = 8/146 (5%)
Frame = +2
Query: 3 RKELASLKKSFAECNGQQVE-ERRLRSIK-------RDIEKCCEELENMETQVKEFETEK 54
+ +L L+ F + VE E++L ++ RD+ + E++ +++ ++KE E EK
Sbjct: 329 KSQLRELETRFIAAEQKNVELEQQLNLVQLKANDAERDVTEFSEKISHLDAKLKEAEEEK 508
Query: 55 NILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFK 114
N+L+ + E K +LE L + + E K + K E E R + E +
Sbjct: 509 NLLNSLLQEHMDKLSQLESDLNQSTQKNSQLEEELKIVKEKCSEHEDRATMNNERSRELE 688
Query: 115 VQVKVLFEAKEEKFEVKMQQFENQVE 140
++ +K EK E + + E +E
Sbjct: 689 DLIQ-SSHSKSEKCEKRASELELLLE 763
>CA858495
Length = 763
Score = 45.1 bits (105), Expect = 4e-05
Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 25/209 (11%)
Frame = +3
Query: 39 ELENMETQVKE-FETEKNILDGQVNEFESKKG-----------ELEGLLRDFESEKTNFE 86
E NM KE E + NIL+ ++ F K+ E EGL E + E
Sbjct: 105 EKVNMLLNEKEGLEQKVNILESNLSSFSEKEAGSVDTTNLLLKEKEGL----EQKLNILE 272
Query: 87 RRQKEFESKEKEFEIRVMEFQS-------KEEEFKVQVKVLFEAKEEKFEVKMQQFENQV 139
F KE E+R+ + QS KE F + L K +K+ E ++
Sbjct: 273 SNLSSFSEKETGLEMRIAQLQSETNSLLQKETGFVEKTNQLLNEKNI-LSLKVDSLERKI 449
Query: 140 EDNLKSVKALELKENQIEVQIKDLKSKLNNFGGQPKELE------LTEKQHDEEKEFDTS 193
+ + KEN E I +L ++ GQ ELE L E Q E +S
Sbjct: 450 IHAESDLSSFVEKENSTEEVISNLNGSISMLQGQVAELEESKNNLLLENQQLRENSSSSS 629
Query: 194 YMDDDGASEEIDILDNLRESSDPAKIVLD 222
D A + + L+ + A ++++
Sbjct: 630 ASQDASAKDRASENEELKSQIEEAYMLVE 716
>TC92479 similar to GP|9759160|dbj|BAB09716.1 contains similarity to myosin
heavy chain~gene_id:MEE6.21 {Arabidopsis thaliana},
partial (4%)
Length = 844
Score = 42.0 bits (97), Expect = 3e-04
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Frame = +2
Query: 71 LEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAK------ 124
LEGL++ S++T E KEKE + R++E ++K EEF V L E +
Sbjct: 212 LEGLIK---SKETALETSTTSSMKKEKELQSRIVELENKVEEFNQNV-TLHEDRSIKSSN 379
Query: 125 --EEKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIKDLKSKLNNFGGQPKELE 178
EK +++ +N + L + +L+ + +E ++K+++ + + + E+E
Sbjct: 380 EISEKVRNRLEHADNSLSGVLTELSSLKERNKSMESELKEMQERYSEMSLKFAEVE 547
>TC88489 similar to GP|14334978|gb|AAK59666.1 unknown protein {Arabidopsis
thaliana}, partial (47%)
Length = 1187
Score = 40.4 bits (93), Expect = 9e-04
Identities = 38/126 (30%), Positives = 65/126 (51%)
Frame = +3
Query: 38 EELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEK 97
EE + +E V+E + + ++ + + ESK + ++ E++NF KEFE K
Sbjct: 96 EEAQKVEVVVEEGKVVEENVEAKESMEESKPTKTVEKCSSYK-EESNFLSDLKEFEKKA- 269
Query: 98 EFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELKENQIE 157
++EF+SK EE V LFE KEE+ + K++ E++ + V E ++ E
Sbjct: 270 -----LIEFRSKVEE-AVLGNTLFEKKEEETK-KVETLPEGGEESSEKVVKEEEEKRVEE 428
Query: 158 VQIKDL 163
V+ KDL
Sbjct: 429 VEEKDL 446
>TC89336 weakly similar to GP|21554135|gb|AAM63215.1 unknown {Arabidopsis
thaliana}, partial (7%)
Length = 1241
Score = 40.4 bits (93), Expect = 9e-04
Identities = 31/158 (19%), Positives = 68/158 (42%), Gaps = 4/158 (2%)
Frame = +1
Query: 20 QVEERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELE----GLL 75
++ E + +K EK +L++++ ++ E GQV E + +K ELE L+
Sbjct: 529 KLSEEEIIKLKNQNEKSEGQLDSVQKELTLNMDELEHKKGQVLELQKQKAELETHVPNLV 708
Query: 76 RDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQF 135
E + + E KE E + E + +++ +V + K E ++
Sbjct: 709 EQLEVANEHLKISNDEVARLRKELESNLAETRQLQDQLEVA-----QENVTKLEWQLDSG 873
Query: 136 ENQVEDNLKSVKALELKENQIEVQIKDLKSKLNNFGGQ 173
Q+ + + + E +EV+++ LK ++++ Q
Sbjct: 874 RKQIRELEDRITWFKTNETNLEVEVQKLKDEMHDVQAQ 987
>TC84723 similar to GP|16945387|emb|CAD11800. conserved hypothetical protein
{Neurospora crassa}, partial (5%)
Length = 999
Score = 40.0 bits (92), Expect = 0.001
Identities = 37/128 (28%), Positives = 70/128 (53%), Gaps = 4/128 (3%)
Frame = +3
Query: 22 EERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESE 81
EE L+ KRD++ E+ N E ++ E + K+ ++ Q + E + E + R+ E+
Sbjct: 588 EEAELQRAKRDLD----EIRNREARISEEKHLKSQVELQKYQEEMRLAE-KAKQREKEAA 752
Query: 82 KT--NFERRQKEFESK-EKEFEIRVMEFQSK-EEEFKVQVKVLFEAKEEKFEVKMQQFEN 137
F+++++E +K EKE + R EFQ + +EE + ++ + +AK+EK E + +
Sbjct: 753 DAVERFQKKEQERLAKQEKEKQEREKEFQRRLQEERQKELDRIAKAKKEKEENEKEYQRR 932
Query: 138 QVEDNLKS 145
ED +KS
Sbjct: 933 LREDLIKS 956
>BF003743 similar to GP|17016406|gb| wsv008 {shrimp white spot syndrome
virus}, partial (16%)
Length = 598
Score = 39.7 bits (91), Expect = 0.001
Identities = 38/186 (20%), Positives = 83/186 (44%), Gaps = 4/186 (2%)
Frame = +2
Query: 15 ECNGQQVEERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGL 74
E + + +E+ RL + + K E E + +K+ + +N ++++ S +++ L
Sbjct: 11 EVDRKSLEQERLTEDRENFAK--EREEELSDIMKKLKDNENESSSKISDLTS---QIDNL 175
Query: 75 LRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQ 134
L D S +++ K E R +S E V + + + +KF++++Q
Sbjct: 176 LADISSLHAQKNELEEQIIFKSTEASTRA---ESITNELNVLQQEVESLQHQKFDLEVQL 346
Query: 135 FENQVEDNLKSVKALELKE--NQIEVQIKDLKSKLNNFGGQPKE--LELTEKQHDEEKEF 190
E E++ S++ LKE ++ ++ + L NF + +E ++ +K D E E
Sbjct: 347 VEKSQENSKCSIQIQSLKEEVDRKSLEQERLMEDRENFAKEREEELSDIMKKLKDNENES 526
Query: 191 DTSYMD 196
+ D
Sbjct: 527 SSKISD 544
>TC88896 weakly similar to GP|6728968|gb|AAF26966.1| unknown protein
{Arabidopsis thaliana}, partial (27%)
Length = 1097
Score = 38.9 bits (89), Expect = 0.003
Identities = 57/282 (20%), Positives = 120/282 (42%), Gaps = 23/282 (8%)
Frame = +2
Query: 2 LRKELASLKKSFAECNGQQVE-ERRLRSIKRDIEKCCEELENMETQVKEFETEK------ 54
L+++L L+ + G + ER L + K + + +++E++E++++ EK
Sbjct: 311 LKEKLGMLEMTVGRQRGDLEDAERCLLAAKEENIEMSKKIESLESEIETVSKEKAQALNN 490
Query: 55 -----NILDGQVNEFESKKGELEGLLRDFESEKTNFERRQ-----KEFESKEKEFEIRVM 104
+ + + E ELE + RD E EKT E ++ ++ + +++
Sbjct: 491 EKLSASSVQTLLEEKNKLINELE-ICRD-EEEKTKLAMDSLASALHEVSAEARDTKEKLL 664
Query: 105 EFQSKEEEFKVQVKVL---FEAKEEKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIK 161
Q++ E ++ Q++ L EA +EK+E + +++ED LKS LE + + E +
Sbjct: 665 ANQAEHESYETQIEDLKSDLEASKEKYESMLNDAHHEIED-LKS--DLEASKEKYESMLN 835
Query: 162 DLKSKLNNFGGQPKELE---LTEKQHDEEKEFDTSYMDDDGASEEIDILDNLRESSDPAK 218
D +++ + + L K E+KE D ++ + E +
Sbjct: 836 DAHHEIDVLTSSIENSKMDILNSKAEWEQKEHDL-----------VECIKRTEEENSS-- 976
Query: 219 IVLDIILNPIIPLPKKGDKAVIIDDESRIYLLEKLMTISPNI 260
L +N +I L KK ++ + E L E + + +
Sbjct: 977 --LGNEVNRLISLLKKTEEEANVKREEETQLKENMKEVEAEV 1096
Score = 32.7 bits (73), Expect = 0.18
Identities = 37/164 (22%), Positives = 69/164 (41%), Gaps = 17/164 (10%)
Frame = +2
Query: 23 ERRLRSIKRDIEKCC---EELENMETQVKEFETE-----------KNILDG---QVNEFE 65
+ + ++K ++EK E+L ET +++ E +++LD +V E E
Sbjct: 11 QTEIEALKHELEKAKGYDEKLAEKETLIEQLNVESEAAKMAESYARSVLDECRKKVEELE 190
Query: 66 SKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKE 125
K E L R S + E K+ E K + E S +E+ + +++ +
Sbjct: 191 MKVEEANQLER---SASLSLETATKQLEGKNELLHDAESEISSLKEKLGM-LEMTVGRQR 358
Query: 126 EKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIKDLKSKLNN 169
E + E+N++ K +E E++IE K+ LNN
Sbjct: 359 GDLEDAERCLLAAKEENIEMSKKIESLESEIETVSKEKAQALNN 490
>TC91751 similar to GP|2739382|gb|AAC14505.1| unknown protein {Arabidopsis
thaliana}, partial (38%)
Length = 1200
Score = 38.9 bits (89), Expect = 0.003
Identities = 49/207 (23%), Positives = 84/207 (39%), Gaps = 22/207 (10%)
Frame = +2
Query: 4 KELASLKKSFAECN----GQQVEERRLRSIKRDIEKCCEELENMETQVKE---------F 50
KEL S K+ E Q EE++ R +D E +E ME + +
Sbjct: 371 KELDSTKRLIEELKLNLERAQTEEQQAR---QDSELAKLRVEEMEQGIADESSVAAKAQL 541
Query: 51 ETEKNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESK-------EKEFEIRV 103
E K + + + K EL+ L +++ S T+ + K+ E EK E
Sbjct: 542 EVAKARYTAAITDLAAVKEELDALRKEYASLVTDRDEAIKKAEEAVTASKEVEKSVEDLT 721
Query: 104 MEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQV--EDNLKSVKALELKENQIEVQIK 161
+E + +E + EA+E++ M + ++ + E LK + + N+ + K
Sbjct: 722 IELIATKESLETAHAAHLEAEEQRIGTVMARDQDSLNWEKELKQAEEELQRINEQMLSAK 901
Query: 162 DLKSKLNNFGGQPKELELTEKQHDEEK 188
DLKSKL G +L+ + E K
Sbjct: 902 DLKSKLEAASGLLLDLKAKLTVYMESK 982
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.133 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,558,485
Number of Sequences: 36976
Number of extensions: 67294
Number of successful extensions: 520
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of query: 310
length of database: 9,014,727
effective HSP length: 96
effective length of query: 214
effective length of database: 5,465,031
effective search space: 1169516634
effective search space used: 1169516634
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC149206.7