BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149197.3 - phase: 0
(257 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ501158 similar to GP|9759555|dbj| gb|AAD20416.1~gene_id:MOJ9.1... 241 2e-64
CB892942 similar to GP|13569548|gb unknown {Arabidopsis thaliana... 160 3e-40
TC92745 similar to GP|10177271|dbj|BAB10624. gene_id:MJB21.5~pir... 102 1e-30
BQ147630 similar to GP|9759368|dbj gene_id:MYJ24.9~pir||T00822~s... 117 4e-27
BF644611 similar to GP|11994755|dbj gb|AAB84348.1~gene_id:T5M7.9... 50 2e-11
TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans P... 39 0.002
BG585334 similar to GP|20161490|db beta-1 3 glucanase-like prote... 34 0.063
TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in... 33 0.11
TC86876 similar to GP|16973296|emb|CAC80857. C-type MADS box pro... 33 0.11
BQ143784 weakly similar to SP|P33485|VNUA Probable nuclear antig... 32 0.18
TC76386 similar to GP|12049598|emb|CAC19855. mitochondrial succi... 32 0.24
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 32 0.24
TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor ... 32 0.31
BF638182 weakly similar to PIR|T45594|T45 glucosidase-like prote... 32 0.31
TC80766 similar to GP|15292967|gb|AAK93594.1 unknown protein {Ar... 31 0.41
AW697223 similar to GP|9757890|dbj phosphoribosylanthranilate tr... 31 0.41
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy... 31 0.41
AW689987 weakly similar to GP|1911338|gb|A unknown {Orgyia pseud... 31 0.41
TC81933 similar to SP|P10496|GRP2_PHAVU Glycine-rich cell wall s... 31 0.41
TC86169 homologue to GP|6624721|emb|CAB63845.1 putative cysteine... 31 0.54
>AJ501158 similar to GP|9759555|dbj| gb|AAD20416.1~gene_id:MOJ9.16~similar to
unknown protein {Arabidopsis thaliana}, partial (22%)
Length = 641
Score = 241 bits (616), Expect = 2e-64
Identities = 124/156 (79%), Positives = 131/156 (83%)
Frame = +3
Query: 1 MGSLHESQTTTGQPPPSPTTGQPPPSPASVNTCPPTVRMPINLQPANSKSKQNSTNKLFG 60
M H +QT T PT +PPP+ S P V M I+LQPANSKSK++STNK FG
Sbjct: 204 MAPPHAAQTMT-----LPTAQRPPPAITS-----PKVPMQISLQPANSKSKRSSTNKFFG 353
Query: 61 KFRSMFRSFPIIVPSCKMPTMNGNHRTSETIIHGGIRITGTLFGYRKARVNLAFQEDSKC 120
KFRSMFRSFPIIVPSCK+PTMNGNHRTSETIIHGG RITGTLFGYRKARVNLAFQEDSKC
Sbjct: 354 KFRSMFRSFPIIVPSCKLPTMNGNHRTSETIIHGGTRITGTLFGYRKARVNLAFQEDSKC 533
Query: 121 HPFLLLELAIPTGKLLQDMGMGLNRIALECEKHSSN 156
HPFLLLELAIPTGKLLQDMGMGLNRIALECEKHSSN
Sbjct: 534 HPFLLLELAIPTGKLLQDMGMGLNRIALECEKHSSN 641
>CB892942 similar to GP|13569548|gb unknown {Arabidopsis thaliana}, partial
(45%)
Length = 767
Score = 160 bits (406), Expect = 3e-40
Identities = 93/225 (41%), Positives = 130/225 (57%), Gaps = 16/225 (7%)
Frame = +2
Query: 49 KSKQNSTNKLFGKFRSMFRSF------PIIVPSCKMPTMNGNHRTSETIIHGGIRITGTL 102
++KQ +T K K S+ RSF I P+C T+ ++ G ++TGTL
Sbjct: 80 QAKQTTTTK---KLSSLIRSFLNIFTFQTIFPTCNWLTIPSTLSSTSISPSLGRKVTGTL 250
Query: 103 FGYRKARVNLAFQEDSKCHPFLLLELAIPTGKLLQDMGMGLNRIALECEKHS------SN 156
FG R+ ++ A Q + P LLLELA+ T L+++M GL RIALEC K S S
Sbjct: 251 FGNRRGHISFAVQLHPRAEPLLLLELAMSTSSLVKEMSSGLVRIALECRKTSSTASAVSG 430
Query: 157 DKTKIVDEPIWTLFCNGKKMGYGVKRDPTDDDLYVIQMLHSVSVAVGELP----SDMSDP 212
+ ++ EP WT++CNG+K GY V R + D +V+ + SVSV G +P
Sbjct: 431 GRVRLFHEPDWTMYCNGRKCGYAVSRTCGELDWHVLTTVQSVSVGAGVIPMLEDGGGCGG 610
Query: 213 QDGELSYMRAHFERVIGSKDSETYYMMMPDGNSNGPELSVFFVRV 257
+GEL YMRA FERV+GS+DSE +YM+ PDGN GPELS+F +R+
Sbjct: 611 SEGELMYMRAKFERVVGSRDSEAFYMLNPDGN-GGPELSIFLLRI 742
>TC92745 similar to GP|10177271|dbj|BAB10624.
gene_id:MJB21.5~pir||T09377~similar to unknown protein
{Arabidopsis thaliana}, partial (71%)
Length = 810
Score = 102 bits (253), Expect(2) = 1e-30
Identities = 55/142 (38%), Positives = 86/142 (59%), Gaps = 1/142 (0%)
Frame = +1
Query: 60 GKFRSMFRSFPIIVPSCKMPTMNGNHRTSETIIHGGIRITGTLFGYRKARVNLAFQEDSK 119
G MF+ FP++ CKM + G R + TGT+FGYRK RV++A QED++
Sbjct: 199 GGLLKMFKLFPMLTSGCKMVALLGRPRKP---MLKDSATTGTIFGYRKGRVSIAIQEDTR 369
Query: 120 CHPFLLLELAIPTGKLLQDMGMGLNRIALECEKHSSNDKTKIVDEPIWTLFCNGKKMGYG 179
P L+EL + T L ++M + RIALE E + +K K+++E +W ++CNG+K+GY
Sbjct: 370 QMPIFLIELPMLTSALNKEMSSDIVRIALESE--TKTNKKKLLEEFVWAVYCNGRKVGYS 543
Query: 180 VKRDPT-DDDLYVIQMLHSVSV 200
++R D++L V+Q L VS+
Sbjct: 544 IRRKQMGDEELQVMQHLRGVSM 609
Score = 48.1 bits (113), Expect(2) = 1e-30
Identities = 25/43 (58%), Positives = 31/43 (71%), Gaps = 3/43 (6%)
Frame = +3
Query: 203 GELP--SDMSDPQDGE-LSYMRAHFERVIGSKDSETYYMMMPD 242
G LP SD + DG+ ++YMR FERVIGSKDSE +YM+ PD
Sbjct: 618 GVLPTASDHKESSDGDQMTYMRGXFERVIGSKDSEXFYMINPD 746
>BQ147630 similar to GP|9759368|dbj gene_id:MYJ24.9~pir||T00822~similar to
unknown protein {Arabidopsis thaliana}, partial (46%)
Length = 649
Score = 117 bits (293), Expect = 4e-27
Identities = 59/145 (40%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Frame = +2
Query: 116 EDSKCHPFLLLELAIPTGKLLQDMGMGLNRIALECEKHSSNDKT--KIVDEPIWTLFCNG 173
+D L+ELA P L+++M G RIALEC+K +K ++++EP W +CNG
Sbjct: 2 KDPTSQEAFLIELATPISGLVREMASGSVRIALECDKAKEAEKKTLRLLEEPQWRTYCNG 181
Query: 174 KKMGYGVKRDPTDDDLYVIQMLHSVSVAVGELP-SDMSDPQDGELSYMRAHFERVIGSKD 232
KK G+ +R+ + +++ + +S+ G +P +D Q+GEL YMRA FER++GS+D
Sbjct: 182 KKCGFANRRECGQKEWDILKAVEPISMGAGVIPGTDNGSEQEGELMYMRAKFERIVGSRD 361
Query: 233 SETYYMMMPDGNSNGPELSVFFVRV 257
SE +YMM PD N PELS++ +RV
Sbjct: 362 SEAFYMMNPDSN-GVPELSIYLLRV 433
>BF644611 similar to GP|11994755|dbj gb|AAB84348.1~gene_id:T5M7.9~similar to
unknown protein {Arabidopsis thaliana}, partial (17%)
Length = 299
Score = 50.1 bits (118), Expect(2) = 2e-11
Identities = 28/61 (45%), Positives = 38/61 (61%), Gaps = 3/61 (4%)
Frame = +3
Query: 191 VIQMLHSVSVAVGELPSDMSDPQ---DGELSYMRAHFERVIGSKDSETYYMMMPDGNSNG 247
+++ + +S+ G LP + +GEL YMRA +ERVIGSKDSE +YMM G S G
Sbjct: 120 ILKAVEPISMGAGVLPMPSTGNGGEFEGELMYMRAKYERVIGSKDSEAFYMMNHVG-SGG 296
Query: 248 P 248
P
Sbjct: 297 P 299
Score = 35.0 bits (79), Expect(2) = 2e-11
Identities = 12/29 (41%), Positives = 18/29 (61%)
Frame = +2
Query: 152 KHSSNDKTKIVDEPIWTLFCNGKKMGYGV 180
K K+++EPIW +CNG+K GY +
Sbjct: 2 KGGGRKSLKLLEEPIWRSYCNGRKCGYAL 88
>TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans PQN-75
protein (corresponding sequence W03D2.1b)
{Caenorhabditis elegans}, partial (10%)
Length = 546
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/67 (35%), Positives = 29/67 (42%), Gaps = 5/67 (7%)
Frame = +3
Query: 12 GQPPPSPTTGQPPPSPASVNTCPPTVRMP-----INLQPANSKSKQNSTNKLFGKFRSMF 66
G PPP PT G PPPSP PP P + A K NST R+M
Sbjct: 348 GSPPPDPTPGSPPPSPDPTPGSPPPPGSPPDPSWESFLVAEHMLKPNSTK------RAML 509
Query: 67 RSFPIIV 73
R+F + +
Sbjct: 510 RTFEVAI 530
Score = 29.3 bits (64), Expect = 1.6
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 8/27 (29%)
Frame = +3
Query: 7 SQTTTGQPP--------PSPTTGQPPP 25
S TTG PP P PTTG PPP
Sbjct: 264 SPPTTGSPPTRPPSSPLPDPTTGSPPP 344
>BG585334 similar to GP|20161490|db beta-1 3 glucanase-like protein {Oryza
sativa (japonica cultivar-group)}, partial (39%)
Length = 835
Score = 33.9 bits (76), Expect = 0.063
Identities = 22/57 (38%), Positives = 28/57 (48%), Gaps = 10/57 (17%)
Frame = +1
Query: 10 TTGQPPPSPTTGQPPPSPASVNTC-------PPTVRMPINLQPANSKSKQN---STN 56
T+ QPP + T GQ PPSP + T PPT P + PA++ N STN
Sbjct: 205 TSPQPPDTSTGGQNPPSPDTDTTSPTNPYSNPPTSTSPYSNPPASTNPYSNPPASTN 375
Score = 29.6 bits (65), Expect = 1.2
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Frame = +1
Query: 9 TTTGQPPPSPTTGQP--------PPSPASVNTCPPTVRMPINLQPANSKSKQNSTN 56
+T GQ PPSP T PP+ S + PP P + PA++ N T+
Sbjct: 229 STGGQNPPSPDTDTTSPTNPYSNPPTSTSPYSNPPASTNPYSNPPASTNPYSNPTS 396
>TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in cucumber
hypocotyls {Cucumis sativus}, partial (57%)
Length = 897
Score = 33.1 bits (74), Expect = 0.11
Identities = 20/52 (38%), Positives = 26/52 (49%), Gaps = 7/52 (13%)
Frame = +3
Query: 9 TTTGQPPPSPTTGQPPPSPASVNTCPPTV-------RMPINLQPANSKSKQN 53
T PPP+P + PP+PA V++ PP V P PA SK K+N
Sbjct: 303 TPVSTPPPAPVPVKSPPTPAPVSS-PPAVTPVAAPTTTPAVPAPAPSKGKKN 455
>TC86876 similar to GP|16973296|emb|CAC80857. C-type MADS box protein {Malus x
domestica}, partial (85%)
Length = 2050
Score = 33.1 bits (74), Expect = 0.11
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +1
Query: 14 PPPSPTTGQPPPS--PASVNTCPPTVRMP 40
PPPSP PPPS PAS N CPP P
Sbjct: 1363 PPPSP----PPPSPPPASTNNCPPPPSPP 1437
>BQ143784 weakly similar to SP|P33485|VNUA Probable nuclear antigen.
[strain Kaplan PRV] {Pseudorabies virus}, partial (2%)
Length = 1022
Score = 32.3 bits (72), Expect = 0.18
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 2 GSLHESQTTTGQPPPSPTTGQPPPSPASVNTCP 34
G+ E+QT G P P T PPP PA TCP
Sbjct: 38 GARGEAQTERGPPTPPNT---PPPPPARPTTCP 127
>TC76386 similar to GP|12049598|emb|CAC19855. mitochondrial succinate
dehydrogenase iron-sulphur subunit {Arabidopsis
thaliana}, partial (60%)
Length = 707
Score = 32.0 bits (71), Expect = 0.24
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Frame = +1
Query: 15 PPSPTTGQPPPSPA---SVNTCPPTVRMPINLQPANSKSKQNSTNKLFGKFRS------- 64
PP P + PP PA S TV P +LQ NSK+ + ST+K G + S
Sbjct: 145 PPKPKPNKSPPKPATPPS*KNSKSTVGTPTHLQSPNSKNTK-STSKNVGPWFSTL*SK*K 321
Query: 65 --MFRSFPIIVPSCK 77
++ P +VP+ K
Sbjct: 322 TTSIQA*PSVVPAAK 366
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 32.0 bits (71), Expect = 0.24
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 14 PPPSPTTGQPPPSPASVNTCPPTV 37
PPP P + PPP PA V + PP V
Sbjct: 32 PPPPPNSPPPPPPPAPVFSPPPPV 103
Score = 27.7 bits (60), Expect = 4.5
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = +2
Query: 14 PPPSPTTGQPPPSPASVNTCPP 35
PPP+P PPP P ++ PP
Sbjct: 65 PPPAPVFSPPPPVPYYYSSPPP 130
Score = 27.7 bits (60), Expect = 4.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 10 TTGQPPPSPTTGQPPPSPASVNTCPP 35
T PPPSP+ PPPSP PP
Sbjct: 365 TPYHPPPSPS---PPPSPVYAYPSPP 433
>TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor (EC
3.2.1.4) (Endo-1 4-beta-glucanase) (Spore germination
protein 270-6), partial (11%)
Length = 643
Score = 31.6 bits (70), Expect = 0.31
Identities = 15/52 (28%), Positives = 25/52 (47%), Gaps = 3/52 (5%)
Frame = +3
Query: 7 SQTTTGQPPPSPTTGQ---PPPSPASVNTCPPTVRMPINLQPANSKSKQNST 55
++T+T PPPS T PP + S T PP+ P ++++ +T
Sbjct: 444 TETSTETPPPSTETSTETTPPSTETSTETTPPSTETSTETTPPSTETSTETT 599
Score = 28.5 bits (62), Expect = 2.7
Identities = 14/52 (26%), Positives = 24/52 (45%), Gaps = 3/52 (5%)
Frame = +3
Query: 7 SQTTTGQPPPSPTTGQ---PPPSPASVNTCPPTVRMPINLQPANSKSKQNST 55
++T+T PPS T PP + S T PP+ P ++++ +T
Sbjct: 477 TETSTETTPPSTETSTETTPPSTETSTETTPPSTETSTETTPPSTETSTENT 632
>BF638182 weakly similar to PIR|T45594|T45 glucosidase-like protein -
Arabidopsis thaliana, partial (46%)
Length = 674
Score = 31.6 bits (70), Expect = 0.31
Identities = 18/44 (40%), Positives = 24/44 (53%), Gaps = 4/44 (9%)
Frame = +3
Query: 7 SQTTTGQPPPSPTTGQP-PPSP---ASVNTCPPTVRMPINLQPA 46
S TT+ P PSP + +P P SP +S T P +V PI P+
Sbjct: 96 SPTTSHHPQPSPLSSKPKPQSPTLKSSTQTLPSSVPSPIQTSPS 227
Score = 27.7 bits (60), Expect = 4.5
Identities = 20/69 (28%), Positives = 29/69 (41%)
Frame = +3
Query: 7 SQTTTGQPPPSPTTGQPPPSPASVNTCPPTVRMPINLQPANSKSKQNSTNKLFGKFRSMF 66
SQ T PPP+ + PSP + + P+ P +SK K S +S
Sbjct: 39 SQLPTSPPPPTTSASTTAPSPTTSHHPQPS--------PLSSKPKPQSPT-----LKSST 179
Query: 67 RSFPIIVPS 75
++ P VPS
Sbjct: 180QTLPSSVPS 206
>TC80766 similar to GP|15292967|gb|AAK93594.1 unknown protein {Arabidopsis
thaliana}, partial (59%)
Length = 785
Score = 31.2 bits (69), Expect = 0.41
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 13 QPPPSPTTGQPPPSPASVNTCPPTVRMPINLQPANSKS 50
QPPPSP + P +P+S PP + P NSKS
Sbjct: 99 QPPPSPPSTTTPSNPSSSQNPPPPTAVN---SPQNSKS 203
>AW697223 similar to GP|9757890|dbj phosphoribosylanthranilate
transferase-like protein {Arabidopsis thaliana}, partial
(5%)
Length = 778
Score = 31.2 bits (69), Expect = 0.41
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 10 TTGQPPPSPTTGQPPPSPASVNTCPPT 36
TT + PP PPP PA+V+ PPT
Sbjct: 489 TTHRVPPPAVFASPPPVPATVSHLPPT 409
>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
granulovirus}, partial (42%)
Length = 909
Score = 31.2 bits (69), Expect = 0.41
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 12 GQPPPSPTTGQPPPSPASVNTCPPTVRMPINLQP 45
GQPPP P PP P + T PPT + P N P
Sbjct: 136 GQPPPPP-----PPPPQAPPTKPPTRQTPKNNTP 222
Score = 28.1 bits (61), Expect = 3.5
Identities = 14/43 (32%), Positives = 19/43 (43%)
Frame = +1
Query: 6 ESQTTTGQPPPSPTTGQPPPSPASVNTCPPTVRMPINLQPANS 48
+ Q + +P GQPPP P PPT + P P N+
Sbjct: 91 KKQKRAPEKKKNPPRGQPPPPPPPPPQAPPT-KPPTRQTPKNN 216
>AW689987 weakly similar to GP|1911338|gb|A unknown {Orgyia pseudotsugata
single capsid nuclear polyhedrosis virus}, partial (11%)
Length = 675
Score = 31.2 bits (69), Expect = 0.41
Identities = 14/44 (31%), Positives = 21/44 (46%)
Frame = +1
Query: 14 PPPSPTTGQPPPSPASVNTCPPTVRMPINLQPANSKSKQNSTNK 57
PPP+P P PSP + PP +P +++ N+ NK
Sbjct: 199 PPPTPALSSPTPSPMKIPIYPPP-PIPSTNSTSSTSINNNNNNK 327
>TC81933 similar to SP|P10496|GRP2_PHAVU Glycine-rich cell wall structural
protein 1.8 precursor (GRP 1.8). [Kidney bean French
bean], partial (4%)
Length = 765
Score = 31.2 bits (69), Expect = 0.41
Identities = 18/43 (41%), Positives = 22/43 (50%), Gaps = 2/43 (4%)
Frame = +3
Query: 3 SLHESQTTTGQPPPSPTTG--QPPPSPASVNTCPPTVRMPINL 43
S SQ ++ PPP P T Q PA +T PPT+ PI L
Sbjct: 21 SFSYSQPSSPPPPPQPVTKITQLAAPPAGFSTPPPTLPPPITL 149
>TC86169 homologue to GP|6624721|emb|CAB63845.1 putative cysteine protease
{Pisum sativum}, partial (96%)
Length = 1311
Score = 30.8 bits (68), Expect = 0.54
Identities = 15/32 (46%), Positives = 17/32 (52%)
Frame = +3
Query: 5 HESQTTTGQPPPSPTTGQPPPSPASVNTCPPT 36
H + G PPPS + G PPPS S PPT
Sbjct: 207 HPPSQSYGAPPPSQSYGAPPPS-QSYGAPPPT 299
Score = 28.9 bits (63), Expect = 2.0
Identities = 14/32 (43%), Positives = 17/32 (52%), Gaps = 7/32 (21%)
Frame = +3
Query: 12 GQPPPSPTTGQPPPS-------PASVNTCPPT 36
G PPPS + G PPPS P+S PP+
Sbjct: 96 GAPPPSQSYGAPPPSQSHGSHPPSSYGAPPPS 191
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,716,123
Number of Sequences: 36976
Number of extensions: 149304
Number of successful extensions: 4186
Number of sequences better than 10.0: 188
Number of HSP's better than 10.0 without gapping: 2039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3524
length of query: 257
length of database: 9,014,727
effective HSP length: 94
effective length of query: 163
effective length of database: 5,538,983
effective search space: 902854229
effective search space used: 902854229
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Medicago: description of AC149197.3