
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149197.11 - phase: 0
(190 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AW126367 similar to GP|10172602|dbj gene_id:MJG19.10~similar to ... 32 0.11
BF004047 weakly similar to GP|15027957|gb| putative arginine/ser... 32 0.15
TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein... 32 0.19
TC90460 similar to GP|15293207|gb|AAK93714.1 unknown protein {Ar... 31 0.33
TC86034 similar to GP|6815067|dbj|BAA90354.1 ESTs AU082210(C5365... 31 0.33
BI311490 weakly similar to GP|21751020|dbj unnamed protein produ... 30 0.43
TC82350 similar to GP|9837385|gb|AAG00554.1| retinitis pigmentos... 30 0.43
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un... 30 0.43
TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome... 30 0.57
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel... 30 0.74
TC82080 similar to GP|9757854|dbj|BAB08488.1 contains similarity... 30 0.74
TC88331 weakly similar to GP|21593279|gb|AAM65228.1 unknown {Ara... 30 0.74
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 29 0.97
TC90598 similar to GP|8953389|emb|CAB96662.1 putative protein {A... 29 0.97
AW695073 similar to GP|22831198|db putative chromodomain-helicas... 29 1.3
TC87372 similar to GP|14091469|gb|AAK53758.1 putative potassium ... 29 1.3
TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone d... 29 1.3
TC80588 similar to GP|23617092|dbj|BAC20775. putative ubiquitin ... 29 1.3
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 29 1.3
TC81365 similar to GP|14579399|gb|AAK69274.1 unknown {Glycine ma... 28 1.6
>AW126367 similar to GP|10172602|dbj gene_id:MJG19.10~similar to probable
membrane-associated salt-inducible protein, partial (3%)
Length = 467
Score = 32.3 bits (72), Expect = 0.11
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 100 DGLETDGDGEDDNEEVKETEEETEIADLG 128
DGLE D G+DD++E EE+T+ A G
Sbjct: 7 DGLELDAAGDDDDDESDSEEEDTDEASSG 93
>BF004047 weakly similar to GP|15027957|gb| putative arginine/serine-rich
protein {Arabidopsis thaliana}, partial (11%)
Length = 835
Score = 32.0 bits (71), Expect = 0.15
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Frame = +1
Query: 82 EADDDAPREVDAIRRYESDGL-----------ETDGDGEDDNEEVKETEEETEIAD 126
E DDD EVD + E DG E DGD + D E+ KE E ETE +D
Sbjct: 127 ERDDD---EVDGGQGGEPDGGKINGGGEREDGEVDGDDDKDEEQEKEVEVETERSD 285
>TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein T28I19.100
- Arabidopsis thaliana, partial (14%)
Length = 1460
Score = 31.6 bits (70), Expect = 0.19
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +3
Query: 59 KEQQAKRNPEDLEIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVKET 118
K ++ + D+EID D K EAD+D EV E E +GD E +NE+ KE
Sbjct: 600 KSEEVEDEGGDVEIDENDHEK-SEADNDREDEVVD----EEKDKEEEGDDETENED-KED 761
Query: 119 EEE 121
EE+
Sbjct: 762 EEK 770
>TC90460 similar to GP|15293207|gb|AAK93714.1 unknown protein {Arabidopsis
thaliana}, partial (28%)
Length = 806
Score = 30.8 bits (68), Expect = 0.33
Identities = 15/49 (30%), Positives = 25/49 (50%)
Frame = +3
Query: 68 EDLEIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVK 116
ED+ + +D + E DDD+ R +D + E+ D DNE++K
Sbjct: 420 EDINVGEDDMMD-DELDDDSGRRIDETIKTETSNATADPAAATDNEDLK 563
>TC86034 similar to GP|6815067|dbj|BAA90354.1 ESTs AU082210(C53655)
AU056546(S20671) AU056545(S20671) correspond to a
region of the predicted, partial (42%)
Length = 2412
Score = 30.8 bits (68), Expect = 0.33
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +3
Query: 27 YLKHNVILIFVSSLIPLTREPWP---LDGITFDTLKEQQAKRNPEDLEIDYEDWLKLQEA 83
YL ++ +I + + L+ P P D IT K + +PE + + + + A
Sbjct: 3 YLSFSLHIIATNFPLSLSVSPNPNPNFDSITAMAKKRKLRSSDPEPTKQAEPEPQQEEVA 182
Query: 84 DDDAPREVDAIRRYESDGLETDGDGEDDNEEVKETEEETE 123
+++ + + E D + +G+GE++ EE EEE +
Sbjct: 183 EEEPTTQEEENTPIEEDQPQNEGEGEEEPEEEVAEEEEDD 302
>BI311490 weakly similar to GP|21751020|dbj unnamed protein product {Homo
sapiens}, partial (22%)
Length = 387
Score = 30.4 bits (67), Expect = 0.43
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 90 EVDAIRRYESDGLETDGDGEDDNEEVKETEEETEIAD 126
EV +++ E D ++ + DGE+DN + E + E D
Sbjct: 361 EVSDVQKQEKDAIDGEDDGEEDNNDEFFNESQPEFED 251
>TC82350 similar to GP|9837385|gb|AAG00554.1| retinitis pigmentosa GTPase
regulator-like protein {Takifugu rubripes}, partial (2%)
Length = 759
Score = 30.4 bits (67), Expect = 0.43
Identities = 17/46 (36%), Positives = 25/46 (53%), Gaps = 3/46 (6%)
Frame = +1
Query: 81 QEADDDAPREVDAIRRYESD---GLETDGDGEDDNEEVKETEEETE 123
Q+ ++D PR V+ D G+E G+ E+D E +E EEE E
Sbjct: 61 QKEEEDHPRAVEDSDNANEDTQYGVEETGEEEEDASENEEEEEEEE 198
>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
protein {Arabidopsis thaliana}, partial (46%)
Length = 2077
Score = 30.4 bits (67), Expect = 0.43
Identities = 21/79 (26%), Positives = 34/79 (42%)
Frame = +2
Query: 52 GITFDTLKEQQAKRNPEDLEIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDD 111
GI LK + E E +YE + EAD+D+ + + + E + + D D +D+
Sbjct: 566 GIEDKFLKIDELTEYLEKEEDNYEKGEERDEADEDSEEDDELEKAGEFEMDDEDDDDDDE 745
Query: 112 NEEVKETEEETEIADLGGG 130
+E E D GG
Sbjct: 746 EDEEAEDMGNVRYEDFFGG 802
Score = 26.9 bits (58), Expect = 4.8
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 53 ITFDTLKEQQAKRNPEDLEIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDDN 112
+ D K+ + K+ E E + +D+ + + DDD V+ + E D + EDD
Sbjct: 323 VPLDVGKKLEKKKRVELEEEESDDFDEELDDDDDDFEGVEKKKAKGGSEGEDDFEEEDDE 502
Query: 113 EE---VKETEEETEIADLGGG 130
+E E +EE E + GG
Sbjct: 503 DEEGSEDEDDEEDEKEKVKGG 565
>TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome assembly
protein 1 {Atropa belladonna}, partial (46%)
Length = 583
Score = 30.0 bits (66), Expect = 0.57
Identities = 18/53 (33%), Positives = 28/53 (51%)
Frame = +2
Query: 71 EIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVKETEEETE 123
E D++D +++ E D+D E D D D +DD+EE ++ EEE E
Sbjct: 59 ESDFDD-IEVDEDDEDGDEEDD-----------DDDDDDDDDEEDEDDEEEDE 181
>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
herpesvirus 3}, partial (8%)
Length = 986
Score = 29.6 bits (65), Expect = 0.74
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 71 EIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVKETEEE 121
E D ED E DD+ + D E D E +G E+DNEE +E E+E
Sbjct: 597 EEDDEDGDDQDEDDDEDEDDDDEEEGGEED--EEEGVDEEDNEEEEEDEDE 743
Score = 26.9 bits (58), Expect = 4.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 81 QEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVKETEEETEIAD 126
+E D+D + + E D E +G ED+ E V E + E E D
Sbjct: 597 EEDDEDGDDQDEDDDEDEDDDDEEEGGEEDEEEGVDEEDNEEEEED 734
>TC82080 similar to GP|9757854|dbj|BAB08488.1 contains similarity to
apoptosis antagonizing transcription
factor~gene_id:MFB13.10, partial (37%)
Length = 908
Score = 29.6 bits (65), Expect = 0.74
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 59 KEQQAKRNPEDLEIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVKET 118
K ++ +++ DL+ +Y+D + E +DD+ E + E D +G D+ EE +
Sbjct: 38 KSKKMQKSDSDLD-EYDDDMSFNEVNDDSEVEEEE---------EEDDEGSDEEEEDERQ 187
Query: 119 EE 120
EE
Sbjct: 188 EE 193
>TC88331 weakly similar to GP|21593279|gb|AAM65228.1 unknown {Arabidopsis
thaliana}, partial (43%)
Length = 1085
Score = 29.6 bits (65), Expect = 0.74
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 40 LIPLTREPWPLDGITFDTLKEQQAKRNPEDLEIDYEDWLKLQEADDDAPREV 91
L+ L RE W ++ F+ +E Q KRN L I + L+E DDD +++
Sbjct: 235 LLLLPRERWVVENQLFEVFREMQIKRNYVCLWILVV--MMLEEEDDDIVQKI 86
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 29.3 bits (64), Expect = 0.97
Identities = 18/67 (26%), Positives = 35/67 (51%)
Frame = +3
Query: 57 TLKEQQAKRNPEDLEIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVK 116
T+ E KR + + ED +++E +D+ E + E + E + + ED++++ +
Sbjct: 9 TMAESSWKRRKVEEHNEEEDEGEVEEEEDEHDEEEED-EHDEEEEEEEEEEEEDEHDDEE 185
Query: 117 ETEEETE 123
E EEE E
Sbjct: 186 EEEEEEE 206
>TC90598 similar to GP|8953389|emb|CAB96662.1 putative protein {Arabidopsis
thaliana}, partial (18%)
Length = 602
Score = 29.3 bits (64), Expect = 0.97
Identities = 19/71 (26%), Positives = 33/71 (45%)
Frame = +3
Query: 59 KEQQAKRNPEDLEIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVKET 118
K ++ +N +DL D D DD+ E A+ E +G+ D D E N ++ ET
Sbjct: 252 KLEEDLKNDDDLSKDDSD------EDDEISEEDFALLERELEGVLGDFDAELLNTDISET 413
Query: 119 EEETEIADLGG 129
+ + ++ G
Sbjct: 414 QGDNDVEKSSG 446
>AW695073 similar to GP|22831198|db putative
chromodomain-helicase-DNA-binding protein {Oryza sativa
(japonica cultivar-group)}, partial (2%)
Length = 449
Score = 28.9 bits (63), Expect = 1.3
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 68 EDLEIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGE-DDNEEVKETEEETEIAD 126
+D + DYE+ E D+D P + D G D E +D++EV +++E+ ++D
Sbjct: 230 DDDDADYEE----DEPDEDDPDDADFEPATSGRGANKYKDWEGEDSDEVDDSDEDIHVSD 397
>TC87372 similar to GP|14091469|gb|AAK53758.1 putative potassium transporter
HAK1p {Mesembryanthemum crystallinum}, partial (38%)
Length = 1660
Score = 28.9 bits (63), Expect = 1.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 78 LKLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVKETEEETEI 124
L L +DD V S+G++ D +DDN +++ T E E+
Sbjct: 1009 LGLGSFEDDTKMTVVGTSSSNSEGVKMSEDDQDDNSQIEGTSELKEV 1149
>TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone deacetylase
HD2-P39 {Glycine max}, partial (47%)
Length = 1233
Score = 28.9 bits (63), Expect = 1.3
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 79 KLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVKETEEETEIADLGGG 130
K +++DDD + D I + + D D ED+++ ++ EEET + + G
Sbjct: 566 KDEDSDDDDESD-DEIGSSDDEMENADSDSEDEDDSDEDDEEETPVKKVDQG 718
>TC80588 similar to GP|23617092|dbj|BAC20775. putative ubiquitin
carboxyl-terminal hydrolase {Oryza sativa (japonica
cultivar-group)}, partial (30%)
Length = 1110
Score = 28.9 bits (63), Expect = 1.3
Identities = 14/44 (31%), Positives = 22/44 (49%)
Frame = -1
Query: 23 PNVIYLKHNVILIFVSSLIPLTREPWPLDGITFDTLKEQQAKRN 66
P +++ +H +I+ FV PL RE WP I T+ +N
Sbjct: 288 PLIVFFRHPLIIEFV----PLFRESWPDKSIIMPTMHAPTVNQN 169
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 28.9 bits (63), Expect = 1.3
Identities = 15/54 (27%), Positives = 29/54 (52%)
Frame = +3
Query: 68 EDLEIDYEDWLKLQEADDDAPREVDAIRRYESDGLETDGDGEDDNEEVKETEEE 121
+D++ + +D + + D+ E D E++G DGEDD+++ E +EE
Sbjct: 351 DDVQDEDDDGEEEDYSGDEGEEEGDPEDDPEANGAGGSDDGEDDDDDGDEEDEE 512
>TC81365 similar to GP|14579399|gb|AAK69274.1 unknown {Glycine max}, partial
(38%)
Length = 920
Score = 28.5 bits (62), Expect = 1.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 101 GLETDGDGEDDNEEVKETEEETEIADLGGGWG 132
G E + D ++D+E ++EEE E + GGG+G
Sbjct: 283 GGEEEEDEDEDDEWEDDSEEEEEESGEGGGYG 378
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,490,130
Number of Sequences: 36976
Number of extensions: 67035
Number of successful extensions: 581
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of query: 190
length of database: 9,014,727
effective HSP length: 91
effective length of query: 99
effective length of database: 5,649,911
effective search space: 559341189
effective search space used: 559341189
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Medicago: description of AC149197.11