
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149131.7 + phase: 0
(111 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC82261 similar to GP|10177249|dbj|BAB10717. contains similarity... 41 6e-05
TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in... 36 0.003
TC77143 similar to GP|559557|gb|AAA51649.1|| arabinogalactan-pro... 35 0.003
TC79902 35 0.003
TC79029 similar to GP|21536695|gb|AAM61027.1 unknown {Arabidopsi... 35 0.003
BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania maj... 35 0.004
TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroele... 34 0.010
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar... 33 0.013
TC77148 ENOD20 33 0.013
BQ144303 weakly similar to GP|6523547|emb| hydroxyproline-rich g... 33 0.017
TC81252 similar to PIR|T52624|T52624 b-Zip DNA binding protein [... 33 0.022
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 32 0.037
BQ751207 weakly similar to GP|604427|gb|AA ACOB protein {Emerice... 32 0.037
TC76720 similar to GP|11121502|emb|CAC14888. putative extensin {... 31 0.063
BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 31 0.083
TC93249 weakly similar to GP|13877617|gb|AAK43886.1 protein kina... 30 0.11
TC88347 homologue to GP|13774427|gb|AAK38870.1 translation initi... 30 0.11
BF633402 similar to PIR|C86226|C862 protein T31J12.4 [imported] ... 30 0.11
TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like... 30 0.11
TC90952 similar to GP|15724316|gb|AAL06551.1 AT4g34150/F28A23_90... 30 0.11
>TC82261 similar to GP|10177249|dbj|BAB10717. contains similarity to
phytocyanin/early nodulin-like protein~gene_id:K19P17.3,
partial (7%)
Length = 740
Score = 41.2 bits (95), Expect = 6e-05
Identities = 32/89 (35%), Positives = 45/89 (49%), Gaps = 4/89 (4%)
Frame = +1
Query: 26 SHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKS 85
S + S T P +S SP P SP IS P+P S P+ + SAP+PAPSS + +
Sbjct: 463 SFFLPSLLTSPELSPSPSSSPS-PSPVIS---PSPTVLSTPPHSSWISAPSPAPSSNQMN 630
Query: 86 SSSTRLD----CVAAIVGIMLFSVFLSFI 110
S S+ + + VG F V +SF+
Sbjct: 631 SQSSNPKHHSVVIWSTVGGFSFLVLVSFM 717
>TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in cucumber
hypocotyls {Cucumis sativus}, partial (57%)
Length = 897
Score = 35.8 bits (81), Expect = 0.003
Identities = 25/68 (36%), Positives = 31/68 (44%), Gaps = 10/68 (14%)
Frame = +3
Query: 28 AVSSTTTEPTISASPGVLPYVTSPDI-----SSFFPTPMSSSEAPYEAEA-----SAPAP 77
A + T T P S+ P V P T P S P P+SS A A + PAP
Sbjct: 252 AAAPTATPPAASSPPAVTPVSTPPPAPVPVKSPPTPAPVSSPPAVTPVAAPTTTPAVPAP 431
Query: 78 APSSGEKS 85
APS G+K+
Sbjct: 432 APSKGKKN 455
Score = 35.0 bits (79), Expect = 0.004
Identities = 20/52 (38%), Positives = 25/52 (47%)
Frame = +3
Query: 28 AVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAP 79
A +T T P ASP P TSP ++ TP ++S P S P PAP
Sbjct: 177 APPTTPTTPAPVASPKSSPPATSPKAAAPTATPPAASSPPAVTPVSTPPPAP 332
Score = 30.4 bits (67), Expect = 0.11
Identities = 17/52 (32%), Positives = 25/52 (47%)
Frame = +3
Query: 29 VSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPS 80
V S T +S+ P V P V +P + P P S + + APAP+P+
Sbjct: 339 VKSPPTPAPVSSPPAVTP-VAAPTTTPAVPAPAPSKGKKNKKKHGAPAPSPA 491
>TC77143 similar to GP|559557|gb|AAA51649.1|| arabinogalactan-protein {Pyrus
communis}, partial (30%)
Length = 956
Score = 35.4 bits (80), Expect = 0.003
Identities = 18/55 (32%), Positives = 25/55 (44%)
Frame = +3
Query: 28 AVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSG 82
A T T PT + P P +P ++ P P +S+AP S+ PAP G
Sbjct: 258 ATPPTATPPTATPPPAAAPTPATPAPATSPPAPTPTSDAPTPDSTSSSPPAPGPG 422
>TC79902
Length = 518
Score = 35.4 bits (80), Expect = 0.003
Identities = 30/99 (30%), Positives = 47/99 (47%)
Frame = +3
Query: 13 LAFVFVVIILLDNSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEA 72
+A + V +LL STTT I+ SP P + P + P+P +SS P E A
Sbjct: 90 IALMIVTALLL-------STTT---IAQSPASSPTKSQPPRKAISPSPAASS--PPEPSA 233
Query: 73 SAPAPAPSSGEKSSSSTRLDCVAAIVGIMLFSVFLSFIA 111
++PA +PSS S +A++ + + L F+A
Sbjct: 234 TSPAVSPSSISGPPSEAPGPASSAVLNRVSVAAILIFVA 350
>TC79029 similar to GP|21536695|gb|AAM61027.1 unknown {Arabidopsis
thaliana}, partial (26%)
Length = 707
Score = 35.4 bits (80), Expect = 0.003
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
Frame = +2
Query: 16 VFVVIILLDNSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPM-------SSSEAPY 68
+FV++ LL S + PT S SP P P S+ PTP SSS P
Sbjct: 128 LFVILGLLATSCLAQAPAPAPTQSLSPNSAPV---PSSSTRSPTPSPAVSPSTSSSPGPS 298
Query: 69 EAEASAPAPAPSSGEKSSSSTRLDCVAAIVGIMLFSVFLSFIA 111
+S PAP +S L+ A FS+ +F+A
Sbjct: 299 PNTSSPPAPGSNSPASGPGGPGLEQPGAESPSAAFSISNTFVA 427
>BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania major}, partial
(1%)
Length = 766
Score = 35.0 bits (79), Expect = 0.004
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +1
Query: 32 TTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSSS 87
TTT PT S++ P TSP +S P+P SS + PAPAPS+ S+S
Sbjct: 250 TTTGPTSSSTSASSPAATSPRTTS--PSPHSS--------GTPPAPAPSASRSSTS 387
>TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroelement pol
polyprotein {Oryza sativa} [Oryza sativa (japonica
cultivar-group)], partial (2%)
Length = 1235
Score = 33.9 bits (76), Expect = 0.010
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = +3
Query: 18 VVIILLDNSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAP 77
+VI+L D ++ S+ TT P S SP V P P+P+SS + +A P P
Sbjct: 444 LVIVLADRTNKNSNQTTSPP-SPSPSVAPS----------PSPLSSHSS--DALTPIPPP 584
Query: 78 APSSGEKSSSSTRLD 92
+P +G + S LD
Sbjct: 585 SPLNGSSTPPSPVLD 629
>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
thaliana}, partial (3%)
Length = 805
Score = 33.5 bits (75), Expect = 0.013
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +3
Query: 26 SHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKS 85
S VS+TT+ P + + +P TSP PTP SS + AS P++ S
Sbjct: 162 SSPVSTTTSPPASTPASSPVPTTTSPPA----PTPASSPVSTNSPTASPAGSLPAAATPS 329
Query: 86 SSST 89
SST
Sbjct: 330 PSST 341
>TC77148 ENOD20
Length = 1108
Score = 33.5 bits (75), Expect = 0.013
Identities = 21/76 (27%), Positives = 35/76 (45%)
Frame = +3
Query: 31 STTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSSSSTR 90
S + P+ S SP + P S ++S P+ S E+P +PAP+PSS
Sbjct: 618 SLSKSPSPSESPSLAPS-PSDSVASLAPSSSPSDESP------SPAPSPSSSGSKGGGAG 776
Query: 91 LDCVAAIVGIMLFSVF 106
+ + +M+F +F
Sbjct: 777 HGFLEVSIAMMMFLIF 824
Score = 29.6 bits (65), Expect = 0.18
Identities = 18/52 (34%), Positives = 25/52 (47%), Gaps = 5/52 (9%)
Frame = +3
Query: 44 VLPYVTSPDISSFFPTPMSSSEAPYEAEAS-----APAPAPSSGEKSSSSTR 90
V P ++SP PTP SS+ P+ S +P+P+PS S S R
Sbjct: 405 VAPVLSSPPPPPSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPR 560
>BQ144303 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (11%)
Length = 1158
Score = 33.1 bits (74), Expect = 0.017
Identities = 14/34 (41%), Positives = 16/34 (46%)
Frame = -1
Query: 46 PYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAP 79
PY T P +S FFP P+ S P P P P
Sbjct: 543 PYFTPPRLSPFFPCPLPSPPLPINPPPPPPPPPP 442
Score = 25.8 bits (55), Expect = 2.7
Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 4/57 (7%)
Frame = -3
Query: 28 AVSSTTTEPTISASP----GVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPS 80
A ST ++S P + P P + FP P S +P+++ AS P P P+
Sbjct: 610 AKHSTLPSRSLSRLPIITRNLAPIFYPPPVIPIFPVPPSLPPSPHKS-ASPPPPPPA 443
>TC81252 similar to PIR|T52624|T52624 b-Zip DNA binding protein [imported] -
Arabidopsis thaliana, partial (48%)
Length = 1221
Score = 32.7 bits (73), Expect = 0.022
Identities = 19/67 (28%), Positives = 35/67 (51%), Gaps = 1/67 (1%)
Frame = +3
Query: 27 HAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEAS-APAPAPSSGEKS 85
H + ++++ +ASP P +P +++ PTP S++ +P S P P P++
Sbjct: 84 HRLPTSSSAAASTASPPPPPSPANPTLTTVAPTPKSTTVSPTTLWTSPLPIP*PAADPPP 263
Query: 86 SSSTRLD 92
+STR D
Sbjct: 264 PASTRSD 284
Score = 25.0 bits (53), Expect = 4.5
Identities = 15/47 (31%), Positives = 21/47 (43%), Gaps = 3/47 (6%)
Frame = -1
Query: 46 PYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAP---SSGEKSSSST 89
P+VT P S+ SS P + + P P S GE+S S+
Sbjct: 345 PFVTPPSFSTSM*VKKRSSSDPISSRLAVEDPPPVKGSEGERSIMSS 205
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 32.0 bits (71), Expect = 0.037
Identities = 20/67 (29%), Positives = 35/67 (51%)
Frame = -1
Query: 23 LDNSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSG 82
+ +S + SS+++ + S+S P +S SS P P++S + +S +P SS
Sbjct: 562 VSSSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPSSSPSSPE*SSS 383
Query: 83 EKSSSST 89
SSSS+
Sbjct: 382 SPSSSSS 362
>BQ751207 weakly similar to GP|604427|gb|AA ACOB protein {Emericella
nidulans}, partial (12%)
Length = 758
Score = 32.0 bits (71), Expect = 0.037
Identities = 25/64 (39%), Positives = 31/64 (48%)
Frame = +1
Query: 26 SHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKS 85
S + S T PTIS P P +TSP SS P P SS+ +P + PAP + S
Sbjct: 229 SSSFSLTAHTPTISPPPPPPPAITSP--SSTPPRPSSSANSPS*LSLT-PAPTSPTPPYS 399
Query: 86 SSST 89
ST
Sbjct: 400 PPST 411
>TC76720 similar to GP|11121502|emb|CAC14888. putative extensin {Nicotiana
sylvestris}, partial (51%)
Length = 1290
Score = 31.2 bits (69), Expect = 0.063
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Frame = +1
Query: 1 MAATTTTTIIKLLAFVFVVIILLDNSHAVSSTTTEPTISASPGVLPY---VTSPDISSFF 57
MA + + LL+F+ + D S A + T S SP +P SP +
Sbjct: 487 MAIPRFSLVFLLLSFLVNIASSAD-SPAPTPATNSSLNSPSPTPIPTPSPANSPPAPTPT 663
Query: 58 PTPMSSSEAPY-----EAEASAPAPAPSSGEKSSSSTRLD 92
PTP S++P + +S+P+P+PSS S D
Sbjct: 664 PTPSPHSDSPPAPSPDNSPSSSPSPSPSSSPAPSPDEAAD 783
Score = 25.8 bits (55), Expect = 2.7
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 30 SSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSSSST 89
S + P + +P P+ SP S +P SSS +P + + AP+P ++ + S T
Sbjct: 628 SPANSPPAPTPTPTPSPHSDSPPAPSPDNSP-SSSPSPSPSSSPAPSPDEAADNNAISHT 804
>BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (30%)
Length = 1338
Score = 30.8 bits (68), Expect = 0.083
Identities = 19/56 (33%), Positives = 29/56 (50%)
Frame = -2
Query: 26 SHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSS 81
+H +S + T P ++ SPG LP S +S P P+ + + A AP P+ SS
Sbjct: 1052 THPLSPSHTIPRLAPSPG-LPAPLSRYYTSLSPPPLHTHDTLTPPSAPAPLPSISS 888
>TC93249 weakly similar to GP|13877617|gb|AAK43886.1 protein kinase-like
protein {Arabidopsis thaliana}, partial (5%)
Length = 669
Score = 30.4 bits (67), Expect = 0.11
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 31 STTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYE-AEASAPAPAPSSGEKSSSST 89
S TT PT S LP +SP+ P+P S P + S P P+P S + + ST
Sbjct: 147 SPTTSPTSSPFSAPLPSPSSPN--GVLPSPSLSRRFPNSMSPTSLPPPSPLS-PRINFST 317
Query: 90 RLDCVAAIVGI 100
RL+ I+ +
Sbjct: 318 RLNTPVKILSL 350
Score = 28.1 bits (61), Expect = 0.54
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 49 TSPDISSFFPTPMSSSEAPYEAEASAPAPAPSS 81
T P S P P S + +P + SAP P+PSS
Sbjct: 108 TPPKFSKPPPPPPSPTTSPTSSPFSAPLPSPSS 206
>TC88347 homologue to GP|13774427|gb|AAK38870.1 translation initiation
factor IF1 {Glycine max}, partial (42%)
Length = 765
Score = 30.4 bits (67), Expect = 0.11
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 13/99 (13%)
Frame = +3
Query: 22 LLDNSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMS-------SSEAPYEAEASA 74
L +S S T P + + P P++++P +S+F P P S S PY +
Sbjct: 153 LPSHSTPQSFTIANPLLPSQP--TPFLSTPPLSTFAPHPSSALHPP*TSLHHPYSPSPPS 326
Query: 75 PAPAP------SSGEKSSSSTRLDCVAAIVGIMLFSVFL 107
P P S + SS + L + V IM FL
Sbjct: 327 PQPPTKPASRNGSTKVSSQNPSLTACSVFVSIMKTLSFL 443
>BF633402 similar to PIR|C86226|C862 protein T31J12.4 [imported] -
Arabidopsis thaliana, partial (7%)
Length = 427
Score = 30.4 bits (67), Expect = 0.11
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +2
Query: 4 TTTTTIIKLLAFVFVVIILLDNSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSS 63
T T T++ + F ++ + T PTI P P + P ++S P P S
Sbjct: 14 THTHTLLPIHTFTLLLFHFCN-----CETNPNPTIQWHPNPKPALPPPPLNSSNPAP*SK 178
Query: 64 SEAPYEAEASAPAPAPSSGEKSSSST 89
S A+ +PA SS ++S+
Sbjct: 179SAPTTTVSAAHGSPARSSAVSPTTSS 256
>TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like protein
{Arabidopsis thaliana}, partial (16%)
Length = 814
Score = 30.4 bits (67), Expect = 0.11
Identities = 23/80 (28%), Positives = 35/80 (43%)
Frame = +3
Query: 26 SHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKS 85
S++ S T P IS G T+P S P S +P ++ P PSS S
Sbjct: 159 SNSPPSPPTTPAISPPSGG---GTTPSPPSRTPPSSDDSPSPPSSKTPPPPSPPSSSSIS 329
Query: 86 SSSTRLDCVAAIVGIMLFSV 105
+ + V A+V ++ FS+
Sbjct: 330 TGTVIGIAVGAVVVLVFFSI 389
Score = 29.3 bits (64), Expect = 0.24
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +3
Query: 41 SPGVLPYVTSPDISSFFP-----TPMSSSEAPYEAEASAPAPAPSSGEKSSSSTRLDCVA 95
SP P ++ P P TP SS ++P + S+ P P S SSS + +
Sbjct: 174 SPPTTPAISPPSGGGTTPSPPSRTPPSSDDSP--SPPSSKTPPPPSPPSSSSISTGTVIG 347
Query: 96 AIVGIMLFSVFLS 108
VG ++ VF S
Sbjct: 348 IAVGAVVVLVFFS 386
>TC90952 similar to GP|15724316|gb|AAL06551.1 AT4g34150/F28A23_90
{Arabidopsis thaliana}, partial (49%)
Length = 1046
Score = 30.4 bits (67), Expect = 0.11
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +2
Query: 34 TEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSSSS 88
T P + A P PY S + SS+ P SS PY S+P P PSS SS
Sbjct: 485 TTPAV-AYPQPPPYPASHNPSSYPP----SSTYPYPQSVSSPYPPPSSSSPYPSS 634
Score = 27.7 bits (60), Expect = 0.70
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 39 SASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKS 85
S+ P Y +SS +P P SSS PY + +P P SS S
Sbjct: 542 SSYPPSSTYPYPQSVSSPYPPPSSSS--PYPSSVPSPYPPTSSSSPS 676
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.315 0.126 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,281,140
Number of Sequences: 36976
Number of extensions: 54338
Number of successful extensions: 877
Number of sequences better than 10.0: 202
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of query: 111
length of database: 9,014,727
effective HSP length: 87
effective length of query: 24
effective length of database: 5,797,815
effective search space: 139147560
effective search space used: 139147560
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)
Medicago: description of AC149131.7