TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149131.14 + phase: 0 
         (28 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BF635211 GP|16604350|gb At1g14680/F10B6_22 {Arabidopsis thaliana...    25  5.3
TC84086 weakly similar to GP|16519223|gb|AAL25128.1 cellulose sy...    25  6.9
TC85508 homologue to PIR|S60608|S60608 chlorophyll a/b-binding p...    25  6.9
TC89925 homologue to GP|3860321|emb|CAA10128.1 beta-galactosidas...    25  9.1

>BF635211 GP|16604350|gb At1g14680/F10B6_22 {Arabidopsis thaliana}, partial
          (4%)
          Length = 432

 Score = 25.4 bits (54), Expect = 5.3
 Identities = 8/13 (61%), Positives = 12/13 (91%)
 Frame = +1

Query: 3  YFLLTHLCGISHR 15
          ++L THLCG+S+R
Sbjct: 73 FYLYTHLCGLSYR 111


>TC84086 weakly similar to GP|16519223|gb|AAL25128.1 cellulose
          synthase-like protein OsCslA9 {Oryza sativa}, partial
          (23%)
          Length = 489

 Score = 25.0 bits (53), Expect = 6.9
 Identities = 9/26 (34%), Positives = 16/26 (60%)
 Frame = +3

Query: 2  RYFLLTHLCGISHRIWCTLSTICSDA 27
          R ++L  +  +  R+WCT + +CS A
Sbjct: 39 RSYILFTVFSLFERLWCTYTHLCSIA 116


>TC85508 homologue to PIR|S60608|S60608 chlorophyll a/b-binding protein type
           II precursor  photosystem I - garden pea, complete
          Length = 1270

 Score = 25.0 bits (53), Expect = 6.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 1   MRYFLLTHLCGISHRIWC 18
           +R    TH CG SH  WC
Sbjct: 320 IRLSCCTHCCGRSHSNWC 267


>TC89925 homologue to GP|3860321|emb|CAA10128.1 beta-galactosidase {Cicer
           arietinum}, partial (20%)
          Length = 765

 Score = 24.6 bits (52), Expect = 9.1
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 4   FLLTHLCGISHRIWCTLS 21
           FL + LC ISH IW T S
Sbjct: 485 FLFSSLCCISH*IWFTRS 432


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.337    0.140    0.519 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,448,483
Number of Sequences: 36976
Number of extensions: 11328
Number of successful extensions: 208
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of query: 28
length of database: 9,014,727
effective HSP length: 4
effective length of query: 24
effective length of database: 8,866,823
effective search space: 212803752
effective search space used: 212803752
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 52 (24.6 bits)