TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149130.9 + phase: 0 /pseudo
         (1214 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-li...   204  2e-52
BG447966 weakly similar to PIR|G96509|G96 protein F27F5.21 [impo...   148  1e-35
BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgari...   137  2e-32
BG585866                                                              130  5e-32
BG586267 weakly similar to PIR|A84888|A8 hypothetical protein At...    99  2e-28
BG587108 similar to PIR|G96509|G9 protein F27F5.21 [imported] - ...    77  1e-26
TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imp...   105  1e-22
TC81386 similar to GP|10140689|gb|AAG13524.1 putative non-LTR re...    93  7e-19
BQ148771                                                               81  1e-16
BG647708 weakly similar to GP|13786450|gb| putative reverse tran...    85  1e-16
BE248682 similar to GP|18568269|gb putative gag-pol polyprotein ...    66  7e-11
TC91765 weakly similar to GP|19881779|gb|AAM01180.1 Putative ret...    57  4e-08
TC82093                                                                44  5e-04
BG584442                                                               43  6e-04
BF647389                                                               42  0.001
TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarot...    39  0.012
BQ122106 similar to GP|9366656|emb|C probable similar to ring-h2...    38  0.027
TC92645                                                                37  0.046
BG647160 homologue to GP|15004435|gb| maturase {Ionopsis satyrio...    36  0.079
TC82948                                                                36  0.10

>BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-like protein
           {Arabidopsis thaliana}, partial (18%)
          Length = 789

 Score =  204 bits (519), Expect = 2e-52
 Identities = 107/251 (42%), Positives = 153/251 (60%), Gaps = 1/251 (0%)
 Frame = -3

Query: 383 DFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFLPGRGTADNSIILQEILHFMKR 442
           ++R I+ CNT YKII K+L  R++P L ++I P QS+F+PGR  +DN +I  +ILH++++
Sbjct: 772 EYRTIAPCNTQYKIIAKILSKRMQPLLRSIISPSQSAFVPGRAISDNVLITHKILHYLRQ 593

Query: 443 SKRKKGY-VAFKLDLEKAFDNVNWDFLNSCLLDFGFPDIIVKLIMHCVSSANYSLLWNGN 501
           S  KK   +A K D+ KA+D + W+FL   L   GF  I +  IM CVS+ +YS L NG 
Sbjct: 592 SGAKKHVSMAVKTDMTKAYDRIAWNFLREVLTRLGFHGIWISWIMECVSTVSYSFLINGG 413

Query: 502 KMPPFKPTHGLRQGDPLSPYLFILCMEKLSVAIQDAVLQGSWEPIHIINDGPQISHLLFA 561
                 P+ GLRQGDPLSPYLFILC E LS   Q A+ +G+   + +  + P I+HLLFA
Sbjct: 412 PQGRVLPSRGLRQGDPLSPYLFILCTEVLSGLCQQALRKGTLPGVKVARNCPPINHLLFA 233

Query: 562 DDVLLFTKAKSSQLQFITNLFDRFSRASGLKINISKSRAYYSSGTPNGKINNLTAISGIQ 621
           DD + F K+ +S    + ++ D++  ASG  IN +KS   +SS T    I+ +     I 
Sbjct: 232 DDTMFFGKSNASSCAILLSIMDKYRAASGRCIN*TKSAITFSSKTSQAIIDRVKGELKIA 53

Query: 622 STTTLGKYLGF 632
                GKYLG+
Sbjct: 52  KEGGTGKYLGY 20


>BG447966 weakly similar to PIR|G96509|G96 protein F27F5.21 [imported] -
           Arabidopsis thaliana, partial (7%)
          Length = 687

 Score =  148 bits (373), Expect = 1e-35
 Identities = 83/209 (39%), Positives = 114/209 (53%)
 Frame = +2

Query: 224 WVKLGDKNTAFFHAQTVIRRKWNKIHKLQLPNGISTSDSNILQEEALKYFKKFFCGSQIP 283
           W+K GDKNT FFH++   RRK N+I KL+   G        ++   + YF   F  S   
Sbjct: 5   WLKDGDKNTKFFHSKASQRRKVNEIKKLKDETGNWCKGEENVERLLITYFNNLFTSSNPT 184

Query: 284 YSRFFNEGRHPALDDTGKTSLTSPITKKEVFAALNSMKPYKAPGPDGFHCIFFKQYWHIV 343
                 E     L            T++EV  A+N M P KAPGPDG   +FF++YWHIV
Sbjct: 185 AIEETCEVVKGKLSHEHIVWCEKEFTEEEVLEAINQMHPVKAPGPDGLPALFFQKYWHIV 364

Query: 344 GDDVFHLVRSAFLTGHFDPAISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVH 403
           G +V  +V            ++ T I LIPK  +PNT KD+RPISLCN + KIITKV+ +
Sbjct: 365 GKEVQQMVLQVLNNSMETEELNKTFIVLIPKGKNPNTPKDYRPISLCNVVMKIITKVIAN 544

Query: 404 RLRPFLNNLIGPYQSSFLPGRGTADNSII 432
           R++  L ++I   QS+F+ GR   DN++I
Sbjct: 545 RVKQTLPDVIDVEQSAFVQGRLITDNALI 631


>BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgaris}, partial
           (69%)
          Length = 616

 Score =  137 bits (346), Expect = 2e-32
 Identities = 77/205 (37%), Positives = 118/205 (57%), Gaps = 3/205 (1%)
 Frame = +3

Query: 304 LTSPITKKEVFAALNSMKPYKAPGPDGFHCIFFKQYWHIVGDDVFHLVRSAFLTGHFDPA 363
           L S  T  EV  AL SM   KAPG DG++  FFK  W+I+GD V   +   F TG     
Sbjct: 12  LCSEFTAVEVKNALFSMDSSKAPGIDGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKI 191

Query: 364 ISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFLPG 423
           I+ T + L+PK  +  + K+FRPI+ C+ +YKII+K+L  R++  LN+++   QS+F+ G
Sbjct: 192 INCTYVTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKG 371

Query: 424 RGTADNSIILQEILHFMKRSKRKKGY---VAFKLDLEKAFDNVNWDFLNSCLLDFGFPDI 480
           R   DN I+  E++    +S  +KG       K+DL KA+D+  W F+   +L+ GFP  
Sbjct: 372 RVIFDNIILSHELV----KSYSRKGISPRCMVKIDLXKAYDSXEWPFIKHLMLELGFPYK 539

Query: 481 IVKLIMHCVSSANYSLLWNGNKMPP 505
            V  +M  +++A+Y+   NG+   P
Sbjct: 540 FVNWVMAXLTTASYTFNXNGDLTXP 614


>BG585866 
          Length = 828

 Score =  130 bits (327), Expect(2) = 5e-32
 Identities = 58/89 (65%), Positives = 72/89 (80%)
 Frame = +3

Query: 789 IIRAKDILKTGYSWRAGAGTSSFWFSNWSSHGYLGSLVPIIDIHDIHLTVKDVLTSVGQH 848
           IIR K++LK+GY+WRAG+G SSFW++NWSS G LG+  P +DIHD+HLTVKDV T+ GQH
Sbjct: 84  IIRDKNVLKSGYTWRAGSGNSSFWYTNWSSLGLLGTQAPFVDIHDLHLTVKDVFTTGGQH 263

Query: 849 TNVLYTNLPQGIAETINNSHMRFNANIDD 877
           T  LYT LP  IAE INN+H+ FNA+I D
Sbjct: 264 TQSLYTILPTDIAEVINNTHLNFNASIGD 350



 Score = 26.9 bits (58), Expect(2) = 5e-32
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 763 LAKKYSSGTSLLE-ANVNSNSSPSWFSI 789
           L   YSSG + L  A  + NSSPSW SI
Sbjct: 1   LFNNYSSGHNFLHIAAAHRNSSPSWSSI 84


>BG586267 weakly similar to PIR|A84888|A8 hypothetical protein At2g45230
           [imported] - Arabidopsis thaliana, partial (16%)
          Length = 794

 Score = 99.0 bits (245), Expect(2) = 2e-28
 Identities = 59/180 (32%), Positives = 90/180 (49%), Gaps = 5/180 (2%)
 Frame = +3

Query: 195 TLLEKELQDEYNHILFQEEMLWYQKSREQWVKLGDKNTAFFHAQTVIRRKWNKIHKLQLP 254
           +LL  EL +EY++    EE+ W QKSR  W++ GD+NT FFHA T  RR  N+I  L   
Sbjct: 84  SLLRSELNEEYHN----EEIFWMQKSRLNWLRSGDRNTKFFHAVTKNRRAQNRILSL--- 242

Query: 255 NGISTSDSNILQEEAL-----KYFKKFFCGSQIPYSRFFNEGRHPALDDTGKTSLTSPIT 309
             I   D     EE L      +FK  +    +  +          + +     L + I+
Sbjct: 243 --IDDDDKEWFVEEDLGRLADSHFKLLYSSEDVGITLEDWNSIPAIVTEEQNAQLMAQIS 416

Query: 310 KKEVFAALNSMKPYKAPGPDGFHCIFFKQYWHIVGDDVFHLVRSAFLTGHFDPAISNTLI 369
           ++EV  A+  + P+K PGPDG +  FF+Q+W  +GDD+  + +    TG  +  I+ T I
Sbjct: 417 REEVREAVFDINPHKCPGPDGMNVFFFQQFWDTMGDDLTSMAQEFLRTGKLEEGINKTNI 596



 Score = 46.6 bits (109), Expect(2) = 2e-28
 Identities = 26/62 (41%), Positives = 37/62 (58%)
 Frame = +1

Query: 371 LIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFLPGRGTADNS 430
           L+PK        +FRPISLCN  YKI++KVL  RL+  L  +I   Q++F   +  +DN 
Sbjct: 601 LVPKKLEAKRLVEFRPISLCNVAYKIVSKVLSKRLKSVLPWIITETQAAFGRRQLISDNI 780

Query: 431 II 432
           +I
Sbjct: 781 LI 786


>BG587108 similar to PIR|G96509|G9 protein F27F5.21 [imported] - Arabidopsis
           thaliana, partial (17%)
          Length = 677

 Score = 77.4 bits (189), Expect(2) = 1e-26
 Identities = 40/89 (44%), Positives = 53/89 (58%)
 Frame = +3

Query: 335 FFKQYWHIVGDDVFHLVRSAFLTGHFDPAISNTLIALIPKIDSPNTYKDFRPISLCNTLY 394
           FF+  WHI+  D+  +V S   +G  D  ++ T I LIPK   P    + RPISLCN  Y
Sbjct: 411 FFQHSWHIIKMDLLKMVNSFLASGKLDTRLNTTNICLIPKKKRPTRMTELRPISLCNVGY 590

Query: 395 KIITKVLVHRLRPFLNNLIGPYQSSFLPG 423
           KII+KVL  RL+  L +LI   QS+F+ G
Sbjct: 591 KIISKVLCQRLKVCLPSLISETQSAFVHG 677



 Score = 62.0 bits (149), Expect(2) = 1e-26
 Identities = 45/140 (32%), Positives = 66/140 (47%)
 Frame = +2

Query: 197 LEKELQDEYNHILFQEEMLWYQKSREQWVKLGDKNTAFFHAQTVIRRKWNKIHKLQLPNG 256
           L+++LQ+ Y      EE  W QKSR  W   GD N  F+HA T  R   N+I  L   +G
Sbjct: 8   LKEKLQEAYK----DEEDYWQQKSRNMWHISGDLNKKFYHALTKQRHARNRIVGLYDYDG 175

Query: 257 ISTSDSNILQEEALKYFKKFFCGSQIPYSRFFNEGRHPALDDTGKTSLTSPITKKEVFAA 316
              ++   +++ A+ YF+  F  +       F +    ++       L    T++EV  A
Sbjct: 176 NWITEEQGVEKVAVDYFEDLFQRTTPTGFDGFLDEITSSITPQMNQRLLRLATEEEVRLA 355

Query: 317 LNSMKPYKAPGPDGFHCIFF 336
           L  M P KAPGPDG   + F
Sbjct: 356 LFIMHPEKAPGPDGMTTLLF 415


>TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imported] -
           Arabidopsis thaliana, partial (6%)
          Length = 951

 Score =  105 bits (262), Expect = 1e-22
 Identities = 105/360 (29%), Positives = 159/360 (44%), Gaps = 16/360 (4%)
 Frame = +2

Query: 348 FHLVRSAFLTGHFDPAISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRP 407
           FH  R  F        I++T IALIPK+D+P    DFRPISL  +LYKI+ K+L +RLR 
Sbjct: 20  FHRNRKLF------KGINSTFIALIPKVDNPQRLNDFRPISLVGSLYKILGKLLANRLRV 181

Query: 408 FLNNLIGPYQSSFLPGRGTADNSIILQEILHFMKRSKRKKGYVAFKLDLEKAFDNVNWDF 467
            + ++I   QS+F+  R   +   + Q  L    R+ R            K F  + W  
Sbjct: 182 VIGSVISDAQSAFVKNRQILEMVFL*QMRLWMRLRN*R------------KIFCCLRWIL 325

Query: 468 LNSCLLDFGFPDIIV-----------KLIMHCVSSANYSLLWNGNKMPPFKPTHGLRQGD 516
                L  G   I+            K I  CVS+A  S+L NG+      PT+ L +  
Sbjct: 326 KRLITLSIGLIWILF*VGMSFLVLWRKWIKECVSTATTSVLVNGS------PTNVLMK-S 484

Query: 517 PLSPYLFILCMEKLSVAIQDAVLQGSWEPIHIINDGPQISHLLFADDVLLFTKAKSSQLQ 576
            +   LF     + S  + + V+               +SHL FA+D LL      + ++
Sbjct: 485 LVQTQLF----TRYSFGVVNPVV---------------VSHLQFANDTLLLETKNWANIR 607

Query: 577 FITNLFDRFSRASGLKINISKSRAYYSSGTPNGKINNLTAISGIQSTTTLGK----YLGF 632
            +      F   SGLK+N  KS     +  P+      + +S       +GK    YLG 
Sbjct: 608 ALRAALVIF*AMSGLKVNFHKSGLVCVNIAPSWLSEAASVLS-----WKVGKVPFLYLGM 772

Query: 633 PMLQGRPKRSDF-NFILEKMQTRLASWKNRLLNRTGRLTLATSVLSTIPTYYMQINWLPQ 691
           P ++G  +R  F   I+ +++ RL  W +R L+  GRL L  SVL+++  Y +  + L Q
Sbjct: 773 P-IEGNSRRLSFWEPIVNRIKARLTGWNSRFLSFGGRLVLLKSVLTSLSVYALPSSKLHQ 949


>TC81386 similar to GP|10140689|gb|AAG13524.1 putative non-LTR retroelement
           reverse transcriptase {Oryza sativa (japonica
           cultivar-group)}, partial (1%)
          Length = 798

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 9/244 (3%)
 Frame = -1

Query: 9   WMLIGDFNETHLPSEQRGGTFHHNRAAT--FSNFMNNCNLLDLTTTGGRFTWHKNNNGIR 66
           W  IGDFN T L S +  G+    R     F  + +  NL  L T G  FTW     G  
Sbjct: 741 WCCIGDFN-TILGSHEHQGSHTPARLPMLDFQQWSDVNNLFHLPTRGSAFTWTNGRRGRN 565

Query: 67  ILSKKLDRGMANVDWRLSFPEAFVEVLCRLHSDHNPLLLRFGGLPLTRGPRPFRFEAAWI 126
              K+LDR + N     +        L +L SDH P+L       + +    F+F   W 
Sbjct: 564 NTRKRLDRSIVNQLMIDNCESLSACTLTKLRSDHFPILFELQTQNI-QFSSSFKFMKMWS 388

Query: 127 DHYDYGNVVKRSWSTHTHN-PTASLIKVMENSI----IFNHDVFGNIFQRKSRVEWRLKG 181
            H D  N++K+ W+      P   L + ++N      ++N + FGN+  +       L  
Sbjct: 387 AHPDCINIIKQCWANQVVGCPMFVLNQKLKNLKEVLKVWNKNTFGNVHSQVDNAYKELDD 208

Query: 182 VQSYLERVDSYRHTLLEKELQDEYN--HILFQEEMLWYQKSREQWVKLGDKNTAFFHAQT 239
           +Q  ++ +  Y   L+++E   + N    L  EE+ W++KS+  W   GD+NTAFFH   
Sbjct: 207 IQVKIDSI-GYSDVLMDQEKAAQLNLESALNIEEVFWHEKSKVNWHCEGDRNTAFFHRVA 31

Query: 240 VIRR 243
            I+R
Sbjct: 30  KIKR 19


>BQ148771 
          Length = 680

 Score = 81.3 bits (199), Expect(2) = 1e-16
 Identities = 46/154 (29%), Positives = 81/154 (51%), Gaps = 2/154 (1%)
 Frame = -3

Query: 640 KRSDFNFILEKMQTRLASWKNRLLNRTGRLTLATSVLSTIPTYYMQINWLPQNICDSIDQ 699
           K+S F+ +  ++   LA+WK   L+   R+TLA SV+  +P Y M    +P+   + I +
Sbjct: 615 KKSRFS-VYYQVHVMLANWKANHLSLARRVTLAKSVIEAVPLYPMMTTIIPKACIEEIQK 439

Query: 700 TARNFLWKGSN-NKGIHLVNWKTITRPKSIGGLGIRSARDANICLLGKLVWDMVQSTNKL 758
             R F+W  +  ++  H V W+T+++PK+I GLG+R     N   + KL W +   +N L
Sbjct: 438 LQRKFVWGDTEVSRRYHAVGWETMSKPKTIYGLGLRRLDVMNKACIMKLGWSIYSGSNSL 259

Query: 759 WVNLLAKKYSSGTSLLEANVNSNSSPS-WFSIIR 791
              ++  KY    SL E  +   +  S W ++++
Sbjct: 258 CTEVMRGKYQRSESLEEIFLEKPTDSSLWKALVK 157



 Score = 24.3 bits (51), Expect(2) = 1e-16
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 618 SGIQSTTTLGKYLGFPMLQGRPKRSDFNFI 647
           +G +  T+LGKY G P  +   K   F+ +
Sbjct: 679 AGFRXATSLGKYXGVPC*EEHQKEPIFSIL 590


>BG647708 weakly similar to GP|13786450|gb| putative reverse transcriptase
           {Oryza sativa}, partial (9%)
          Length = 708

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 44/101 (43%), Positives = 57/101 (55%)
 Frame = +1

Query: 508 PTHGLRQGDPLSPYLFILCMEKLSVAIQDAVLQGSWEPIHIINDGPQISHLLFADDVLLF 567
           P  GLRQGDPLSPYLFILC   LS  ++    + +   I +    P+I+HLLFADD LLF
Sbjct: 4   PEKGLRQGDPLSPYLFILCANVLSGLLKREGNKQNLHGIQVARSDPKITHLLFADDSLLF 183

Query: 568 TKAKSSQLQFITNLFDRFSRASGLKINISKSRAYYSSGTPN 608
            +A  ++   I  +   +  ASG  +N  KS   YS   PN
Sbjct: 184 ARANLTEAATIMQVLHSYQSASGQLVNFEKSEVSYSQNVPN 306


>BE248682 similar to GP|18568269|gb putative gag-pol polyprotein {Zea mays},
           partial (1%)
          Length = 441

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 34/88 (38%), Positives = 51/88 (57%)
 Frame = +3

Query: 511 GLRQGDPLSPYLFILCMEKLSVAIQDAVLQGSWEPIHIINDGPQISHLLFADDVLLFTKA 570
           GL+QGDPL+P+LF+L  E +S  +++AV +  ++   +   G ++SHL +ADD L     
Sbjct: 27  GLKQGDPLAPFLFLLVAEGISGLMKNAVNRNLFQGFDVKRGGTRVSHLQYADDTLCIGMP 206

Query: 571 KSSQLQFITNLFDRFSRASGLKINISKS 598
               L  +  L   F  ASGLK+N  KS
Sbjct: 207 TVDNLWTLKALLQGFEMASGLKVNFHKS 290


>TC91765 weakly similar to GP|19881779|gb|AAM01180.1 Putative retroelement
           {Oryza sativa (japonica cultivar-group)}, partial (1%)
          Length = 625

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 29/69 (42%), Positives = 40/69 (57%)
 Frame = +2

Query: 488 CVSSANYSLLWNGNKMPPFKPTHGLRQGDPLSPYLFILCMEKLSVAIQDAVLQGSWEPIH 547
           CV S +Y +L N + + P  P+ GL+QGD LSPY+FI+C+E LS  I  A  +G      
Sbjct: 104 CVESNDYYVLVNNDAVDPIIPSRGLQQGDHLSPYIFIICVEGLSFLIPHAKERGDTHGTS 283

Query: 548 IINDGPQIS 556
           I    P +S
Sbjct: 284 I*RGAPPVS 310



 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 27/90 (30%), Positives = 42/90 (46%)
 Frame = +3

Query: 558 LLFADDVLLFTKAKSSQLQFITNLFDRFSRASGLKINISKSRAYYSSGTPNGKINNLTAI 617
           LLF    L   + +    Q + N+   +   SG  I++ KS  Y S   P+    ++T I
Sbjct: 279 LLFEGAPLRSLRVEEHHAQIMKNILILYEEDSGKAISLRKS*IYCSRNVPDILKTSITYI 458

Query: 618 SGIQSTTTLGKYLGFPMLQGRPKRSDFNFI 647
            G+Q      KYLG P + GR + + F+ I
Sbjct: 459 LGVQFMLGTCKYLGLPSMIGRDRTTTFSSI 548


>TC82093 
          Length = 569

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -1

Query: 208 ILFQEEMLWYQKSREQWVKLGDKNTAFFHAQTV 240
           +L Q EMLWY KS+  WVK G +NT FFH + V
Sbjct: 476 LLSQNEMLWY*KSQ*NWVKYGSRNTWFFHNEDV 378


>BG584442 
          Length = 775

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 28/108 (25%), Positives = 52/108 (47%), Gaps = 2/108 (1%)
 Frame = +1

Query: 659 KNRLLNRTGRLTLATSVLSTIPTYYMQINWLPQNICDSIDQTARNFLWK--GSNNKGIHL 716
           +N+ L++     +    L +I +Y M I  L  +  D I++    F W   G N KG+H 
Sbjct: 397 RNKCLSKVM*EVMIKYALQSISSYVMSIFLLLNSQVDEIEKIMNTFSWVHVGENRKGMHW 576

Query: 717 VNWKTITRPKSIGGLGIRSARDANICLLGKLVWDMVQSTNKLWVNLLA 764
           ++ + +   K+ GG+G       NI +LGK V   + +   L++  ++
Sbjct: 577 MS*EKLFVHKNYGGMGFTDFTTFNIPMLGKQV*SFLLNRTTLFLEKIS 720


>BF647389 
          Length = 404

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
 Frame = +2

Query: 628 KYLGFPMLQGRPKRSDFNFILEKMQTRLASWKNRLLNRTGRLTLATSVLSTIPTYYMQIN 687
           +YLG P+     K+      ++K+  R+ +  ++LL+  G L L   VL  +  Y+ Q+ 
Sbjct: 41  RYLGVPLSS---KKLYVIQRVKKIICRIEN*SSKLLSYAGSLQLIKIVLFGVQPYWSQVF 211

Query: 688 WLPQNICDSIDQTARNFLWKGSNNKGIH-LVNWKTITRPKSIGGLGIRSARDANICLLGK 746
            LP  +   I  T R FL  G +      L+  + I  PK+ GG  +   +  N   + K
Sbjct: 212 VLP*KVIKLIQTTCRIFL*TGKSGTSKRALIAREHICLPKTAGGWNVIDLKVXNQTAICK 391

Query: 747 LVWD 750
           L W+
Sbjct: 392 LXWN 403


>TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarotenoid
           dioxygenase1 {Pisum sativum}, partial (43%)
          Length = 1865

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 18/48 (37%), Positives = 25/48 (51%)
 Frame = -3

Query: 725 PKSIGGLGIRSARDANICLLGKLVWDMVQSTNKLWVNLLAKKYSSGTS 772
           P+  GGLG+R  R  N+ LL K  W ++Q  + LW  +L   Y    S
Sbjct: 963 PRCKGGLGVRDIRLVNVSLLAKWWWRLLQDQSSLWKEVLEDIYGPRVS 820


>BQ122106 similar to GP|9366656|emb|C probable similar to ring-h2 finger
            protein rha1a. {Trypanosoma brucei}, partial (18%)
          Length = 693

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 47/151 (31%), Positives = 60/151 (39%)
 Frame = -3

Query: 1033 SRVTSFSRIQLAW*NGIKETINVTFSM*TAVVSELQFELDSEVFFETTLVVTYLVTPVLS 1092
            S +T F +    W*NGI  T  V FSM T VV       DS     T      LV+P   
Sbjct: 613  SCITPFLKRPTPW*NGIATTTLVIFSMLTGVVLATLSLPDSTASLGTLRDYLTLVSPGTL 434

Query: 1093 RNRQTSC*LNSLLFIKA*SWQLKWE*KS*LATRTRFLPLISSQEQLQNTILTLS*YKT*R 1152
              R T    NS+   K       WE     AT T    L+SS +   + +     +KT*R
Sbjct: 433  PTRLTFFWPNSMPSFKVCE*FQIWEYLILCATSTLSTMLVSSMDLP*SFMSMPLSFKT*R 254

Query: 1153 TSYPHIISQSIIVSGKGINARTTWRNWERHR 1183
            TS          +  + I A+   + WER R
Sbjct: 253  TSSLPARLLFFTLFVREITAQIFLKCWERLR 161


>TC92645 
          Length = 561

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +3

Query: 296 LDDTGKTSLTSPITKKEVFAALNSMKPYKAPGPDGFHCIFFKQYWHIVGDDVFHLVRSAF 355
           + D     LT+P +  E++ A+  M   KA G DG +   + ++ ++VG D  + V    
Sbjct: 282 IGDQNNCMLTAPFSVDEIWTAIFQMHHDKAFGLDGLNLAVYYRF*NLVGGDT-NYVGLYS 458

Query: 356 LTGHFDPA--ISNTLIALIPKIDSPNTYKD 383
           L G    A     T I L+PK DSP+T  D
Sbjct: 459 LVG*R*VA*LYWGTNIVLVPKCDSPSTMWD 548


>BG647160 homologue to GP|15004435|gb| maturase {Ionopsis satyrioides}, partial
            (2%)
          Length = 780

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 44/129 (34%), Positives = 53/129 (40%), Gaps = 1/129 (0%)
 Frame = +2

Query: 1057 FSM*TAVVSELQFELDSEVFFETTLVVTYLVTPVLSRNRQTSC*LNSLLFIKA*SWQLKW 1116
            F M     S   F  D  V F T   +T  V  V     + SC LN  LFIK *+WQ   
Sbjct: 329  F*MSKEAASVFLFTHDLVVLFATI*ALT*QVFRVSYPFIKISCLLN*QLFIKV*NWQSP* 508

Query: 1117 E*KS*LATRTRFLPLISSQE-QLQNTILTLS*YKT*RTSYPHIISQSIIVSGKGINARTT 1175
              K      T +   ISS+   L  T +  S + T  TS    IS  II   + IN R +
Sbjct: 509  ILKKWFVILTLYSLSISSRRISLSTTFMRFS-FITSNTS*ALGISLFIIHLERAINVRIS 685

Query: 1176 WRNWERHRM 1184
            W N E   M
Sbjct: 686  WSNLEPRLM 712


>TC82948 
          Length = 705

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +3

Query: 717 VNWKTITRPKSIGGLGIRSARDANICLLGKLVWDMVQS 754
           V+W+ + RP   G LGIRS    N  L  KL WDM+ S
Sbjct: 267 VSWEKVCRPIKEGSLGIRSLSKLNEALNLKLCWDMMIS 380


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.331    0.143    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,318,800
Number of Sequences: 36976
Number of extensions: 659351
Number of successful extensions: 3845
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2827
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 958
Number of HSP's gapped (non-prelim): 3052
length of query: 1214
length of database: 9,014,727
effective HSP length: 107
effective length of query: 1107
effective length of database: 5,058,295
effective search space: 5599532565
effective search space used: 5599532565
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 64 (29.3 bits)