BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149127.7 - phase: 0
(360 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC80088 similar to GP|9759352|dbj|BAB10007.1 gene_id:MAH20.14~un... 89 3e-37
TC80596 similar to GP|9759352|dbj|BAB10007.1 gene_id:MAH20.14~un... 128 4e-30
TC87443 similar to GP|13397927|emb|CAC34625. putative calmodulin... 42 5e-04
TC77023 calmodulin 2 [Medicago truncatula] 41 6e-04
TC76783 calmodulin 1 [Medicago truncatula] 41 6e-04
TC88855 PIR|A30900|MCBH calmodulin - barley, complete 41 6e-04
AW573662 weakly similar to PIR|D96689|D966 calmodulin-related pr... 40 0.002
TC86088 calmodulin-like protein 1 [Medicago truncatula] 39 0.004
TC80225 similar to GP|14589311|emb|CAC43238. calcium binding pro... 37 0.015
TC82447 similar to GP|14589311|emb|CAC43238. calcium binding pro... 35 0.045
TC87357 calmodulin-like protein 2 [Medicago truncatula] 34 0.077
TC87019 weakly similar to GP|12003380|gb|AAG43547.1 Avr9/Cf-9 ra... 34 0.077
AL382556 homologue to GP|169306|gb|AA calmodulin {Phytophthora i... 33 0.22
TC88108 calmodulin-like protein 3 [Medicago truncatula] 30 1.9
AL382510 weakly similar to GP|13194672|gb| calmodulin-like prote... 29 2.5
BG584659 weakly similar to GP|12963415|gb| regulator of gene sil... 29 3.2
TC89961 GP|13561063|emb|CAA65500. protein kinase {Medicago sativ... 29 3.2
TC87949 similar to GP|16904224|gb|AAL30819.1 calcium/calmodulin-... 29 3.2
TC89092 similar to GP|15011837|gb|AAK26164.2 calcium-dependent c... 29 3.2
TC92650 homologue to GP|2252842|gb|AAB62841.1| A_IG005I10.23 gen... 28 4.2
>TC80088 similar to GP|9759352|dbj|BAB10007.1 gene_id:MAH20.14~unknown
protein {Arabidopsis thaliana}, partial (73%)
Length = 1346
Score = 88.6 bits (218), Expect(2) = 3e-37
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 11/216 (5%)
Frame = +3
Query: 1 MSKAVVYTVIATATLLIFIVLSPLNLEESKGRLNNRRFGYKIL---------ERAPTFDP 51
+ ++YT++A L SP N S R + + FDP
Sbjct: 102 LGSVLIYTILALIVLFFLSSHSPFNNHHSSHRHRRLKLRSNFTLSPSRSHSSHQPVPFDP 281
Query: 52 LVTKIERESEQK--NQQHKNDFDNNKNVAPRTGLGSTTTVSEIKETYEYLTSGGTLNTTL 109
LV ++ER E K QQH ++ S + +++ N T
Sbjct: 282 LVAELERHREDKQWEQQHIQHAPPHE---------SQPEWEDFMNAEDFINDEDKFNVTS 434
Query: 110 RLIILFPLLDRDPKDGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSFREYL 169
RL++LFP +D DP D FV +EL W Q+A + + +Q E+E DKN D +SF EY
Sbjct: 435 RLLLLFPKIDVDPADQFVDLHELTMWNLQQAHREVLHRSQREMELHDKNHDGFVSFSEYD 614
Query: 170 PDLSEKDIEKKNMAHGEAGWLMEKFDVADYDHNGLL 205
P K +K++ + W E F+ +D D +G+L
Sbjct: 615 PPS*VKSADKESFGYDMGWWKEEHFNASDADGDGVL 722
Score = 84.7 bits (208), Expect(2) = 3e-37
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Frame = +1
Query: 206 NFTELRDFLHPEDSQNKEMLKWMVNDKFNMDDYEHDGKINFNQFEDNVYVTYESYVDFET 265
N TE DFLHP DS + ++ +W+ ++ D + DGK+NF +F ++ +Y D E+
Sbjct: 724 NLTEFNDFLHPADSNSTKLQQWLCKEEIRERDSDRDGKVNFKEFFHGLFDLVRNY-DEES 900
Query: 266 NGEG-------DIPTAKDKFAELDVNKDQFLSPEELFPIIPYVYPGELAYAKYYTSYLMN 318
+ + D P A+ FA+LD + D LS EL PII ++P E YAK + Y+++
Sbjct: 901 HNDSHHSDNSLDAP-ARKLFAQLDQDGDGLLSDIELLPIIGKLHPSEHYYAKQQSEYIIS 1077
Query: 319 EADDNED 325
+AD N+D
Sbjct: 1078QADVNKD 1098
>TC80596 similar to GP|9759352|dbj|BAB10007.1 gene_id:MAH20.14~unknown
protein {Arabidopsis thaliana}, partial (21%)
Length = 1302
Score = 128 bits (321), Expect = 4e-30
Identities = 85/255 (33%), Positives = 128/255 (49%), Gaps = 10/255 (3%)
Frame = +1
Query: 106 NTTLRLIILFPLLDRDPKDGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSF 165
N T R+ LFP +D DP D FV EL W ++ + +Q E+ DKN D +SF
Sbjct: 178 NVTNRIARLFPEIDVDPTDQFVSVQELTQWNVHHVQRQILHHSQKEMVVYDKNRDGFVSF 357
Query: 166 REY-LPDLSEKDIEKKNMAHGEAGWLMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEM 224
++ L + D +M E E F+ +D D +GLLN E DFL P DS N +
Sbjct: 358 SKFGLFTPTTGDPFGYDMRLLEE----EHFNASDVDGDGLLNLAEFNDFLRPADSNNPRL 525
Query: 225 LKWMVNDKFNMDDYEHDGKINFNQFEDNVYVTYESYVDFETNGEGDI-----PTAKDKFA 279
+W+ ++ D + DGK++F +F +Y +Y + N +AK F+
Sbjct: 526 QQWLCKEEVRERDMDRDGKVSFREFFYGLYDLVSNYDEKSHNDSHHSDHSMDASAKVLFS 705
Query: 280 ELDVNKDQFLSPEELFPIIPYVYPGELAYAKYYTSYLMNEADDNEDRKLTLDEMLDHEFA 339
+LD + D +LS EL PII V+P YA YLM++A+ + D +L L EM+D+ +
Sbjct: 706 QLDKDFDGYLSDIELLPIIGKVHPSGHYYATKQAEYLMSQAEVDNDGRLNLTEMIDNAYT 885
Query: 340 FFNTVHAD----GHV 350
F ++ D GHV
Sbjct: 886 LFVSIFPDEFF*GHV 930
>TC87443 similar to GP|13397927|emb|CAC34625. putative calmodulin-related
protein {Medicago sativa}, partial (69%)
Length = 918
Score = 41.6 bits (96), Expect = 5e-04
Identities = 35/130 (26%), Positives = 55/130 (41%), Gaps = 3/130 (2%)
Frame = +3
Query: 124 DGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSFREYLPDLSEKDIEKKNMA 183
DG + +EL+ + E + +E D+NGD + +E+ D
Sbjct: 66 DGKISRSELKEMLLTLGSETTSEEVKRMMEELDQNGDGFIDLKEFA------DFHCTEPG 227
Query: 184 HGEAGWLMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEMLKWMVNDKFNM---DDYEH 240
E+ L + FD+ D D NGL++ EL L K K +ND M D +
Sbjct: 228 KDESSELRDAFDLYDLDKNGLISANELHAVL------MKLGEKCSLNDCKKMISNVDVDG 389
Query: 241 DGKINFNQFE 250
DG +NF +F+
Sbjct: 390 DGNVNFEEFK 419
>TC77023 calmodulin 2 [Medicago truncatula]
Length = 999
Score = 41.2 bits (95), Expect = 6e-04
Identities = 34/135 (25%), Positives = 60/135 (44%)
Frame = +1
Query: 115 FPLLDRDPKDGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSFREYLPDLSE 174
F L D+D DG + EL + + + Q + D +G+ + F E+L ++
Sbjct: 133 FSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 309
Query: 175 KDIEKKNMAHGEAGWLMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEMLKWMVNDKFN 234
K + + L E F V D D NG ++ ELR H + +++ V++
Sbjct: 310 KMKDTDSEEE-----LKEAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIR 465
Query: 235 MDDYEHDGKINFNQF 249
D + DG+IN+ +F
Sbjct: 466 EADVDGDGQINYEEF 510
>TC76783 calmodulin 1 [Medicago truncatula]
Length = 957
Score = 41.2 bits (95), Expect = 6e-04
Identities = 34/135 (25%), Positives = 60/135 (44%)
Frame = +3
Query: 115 FPLLDRDPKDGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSFREYLPDLSE 174
F L D+D DG + EL + + + Q + D +G+ + F E+L ++
Sbjct: 168 FSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 344
Query: 175 KDIEKKNMAHGEAGWLMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEMLKWMVNDKFN 234
K + + L E F V D D NG ++ ELR H + +++ V++
Sbjct: 345 KMKDTDSEEE-----LKEAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIR 500
Query: 235 MDDYEHDGKINFNQF 249
D + DG+IN+ +F
Sbjct: 501 EADVDGDGQINYEEF 545
>TC88855 PIR|A30900|MCBH calmodulin - barley, complete
Length = 889
Score = 41.2 bits (95), Expect = 6e-04
Identities = 34/135 (25%), Positives = 60/135 (44%)
Frame = +1
Query: 115 FPLLDRDPKDGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSFREYLPDLSE 174
F L D+D DG + EL + + + Q + D +G+ + F E+L ++
Sbjct: 124 FSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 300
Query: 175 KDIEKKNMAHGEAGWLMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEMLKWMVNDKFN 234
K + + L E F V D D NG ++ ELR H + +++ V++
Sbjct: 301 KMKDTDSEEE-----LKEAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIR 456
Query: 235 MDDYEHDGKINFNQF 249
D + DG+IN+ +F
Sbjct: 457 EADVDGDGQINYEEF 501
>AW573662 weakly similar to PIR|D96689|D966 calmodulin-related protein
72976-72503 [imported] - Arabidopsis thaliana, partial
(29%)
Length = 615
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/144 (26%), Positives = 62/144 (42%), Gaps = 8/144 (5%)
Frame = +1
Query: 114 LFPLLDRDPKDGFVGFNELESWVTQRALERLDYATQVE--LESKDKNGDLALSFREYLPD 171
+F L+D + DG + EL ++ + + + E + D NGD + E++
Sbjct: 124 IFKLIDTN-NDGKISTTELSEVLSCLGYNKCTASKEAESMIRVLDFNGDGFVDIDEFMFV 300
Query: 172 LSEKDIEKKNMAHGEAGWLMEKFDVADYDHNGLLNFTELRDFLHPEDSQN------KEML 225
+ E K H +LM+ F V D D NGL++ ELR L +N K M+
Sbjct: 301 MKEDGNFGKGKEHDHDEYLMDAFLVFDIDKNGLISPKELRRVLVNLGCENCSLRDCKRMI 480
Query: 226 KWMVNDKFNMDDYEHDGKINFNQF 249
K + D DG ++F +F
Sbjct: 481 KGV--------DKNGDGFVDFEEF 528
>TC86088 calmodulin-like protein 1 [Medicago truncatula]
Length = 867
Score = 38.5 bits (88), Expect = 0.004
Identities = 33/135 (24%), Positives = 60/135 (44%)
Frame = +1
Query: 115 FPLLDRDPKDGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSFREYLPDLSE 174
F LLD+D +D + +EL++ + L + V + D +G+ + F +E
Sbjct: 217 FRLLDKD-QDFSIDNDELQTLIRSLGLNPTFFGLMVAMNKFDADGNGTIDF-------TE 372
Query: 175 KDIEKKNMAHGEAGWLMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEMLKWMVNDKFN 234
+D + F D DHNG ++ +EL +L + ++ K V++
Sbjct: 373 EDF-------------IISFPKPDKDHNGFVSASELHYYL---TNHGTKVTKEEVDEYVR 504
Query: 235 MDDYEHDGKINFNQF 249
D + DG+INF +F
Sbjct: 505 EADVDGDGQINFEEF 549
Score = 31.2 bits (69), Expect = 0.65
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +1
Query: 63 KNQQHKNDFDNNKNVAPRTGLGSTTTVSEIKETYEYLTSGGTLNTTLR-LIILFPLLDRD 121
K+Q D D + + GL T + GT++ T II FP D+D
Sbjct: 232 KDQDFSIDNDELQTLIRSLGLNPTFFGLMVAMNKFDADGNGTIDFTEEDFIISFPKPDKD 411
Query: 122 PKDGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSFREYL 169
+GFV +EL ++T + + D +GD ++F E++
Sbjct: 412 -HNGFVSASELHYYLTNHGTKVTKEEVDEYVREADVDGDGQINFEEFV 552
>TC80225 similar to GP|14589311|emb|CAC43238. calcium binding protein
{Sesbania rostrata}, partial (87%)
Length = 704
Score = 36.6 bits (83), Expect = 0.015
Identities = 25/75 (33%), Positives = 36/75 (47%), Gaps = 3/75 (4%)
Frame = +3
Query: 179 KKNMAHGEAGWLMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEMLKWMVNDKFNM--- 235
+ A G+ L E FD+ D D NGL++ TEL L N +K V + M
Sbjct: 270 RSGSADGDVSELREAFDLYDKDKNGLISATELCQVL------NTLGMKCSVEECHTMIKS 431
Query: 236 DDYEHDGKINFNQFE 250
D + DG +NF +F+
Sbjct: 432 VDSDGDGNVNFEEFK 476
>TC82447 similar to GP|14589311|emb|CAC43238. calcium binding protein
{Sesbania rostrata}, partial (79%)
Length = 660
Score = 35.0 bits (79), Expect = 0.045
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Frame = +2
Query: 124 DGFVGFNELESWVTQRALERLDYATQVELE------SKDKNGDLALS-FREYLPDLSEKD 176
DG + NELE+ + R L R D Q EL S D++G + LS F +
Sbjct: 218 DGKISVNELETVL--RTL-RSDVPQQEELRRVMEELSTDRDGFINLSEFAAFC------- 367
Query: 177 IEKKNMAHGEAGWLMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEMLKWMVNDKFNMD 236
+ + G L + FD+ D D NGL++ EL L D + D
Sbjct: 368 --RSDTTDGGDSALRDAFDLYDKDKNGLISTEELHLAL---DRLGMKCSVEECQDMIKSV 532
Query: 237 DYEHDGKINFNQFE 250
D + DG +NF++F+
Sbjct: 533 DSDGDGSVNFDEFK 574
>TC87357 calmodulin-like protein 2 [Medicago truncatula]
Length = 903
Score = 34.3 bits (77), Expect = 0.077
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +1
Query: 81 TGLGSTTTVSEIKETYEYLTSGGTLNTTLR-LIILFPLLDRDPKDGFVGFNELESWVTQR 139
TGL T + + GT++ T L+I+F D D +GFV +EL + T +
Sbjct: 271 TGLNPTDFGLMVARSKSATDGNGTIDFTKEELLIVFSKPDTD-HNGFVTASELHCYFTNQ 447
Query: 140 ALERLDYATQVELESKDKNGDLALSFREYL 169
++ + + D +GD LSF+E++
Sbjct: 448 GIKMTIEEANEYVRAADSDGDGHLSFKEFV 537
>TC87019 weakly similar to GP|12003380|gb|AAG43547.1 Avr9/Cf-9 rapidly
elicited protein 31 {Nicotiana tabacum}, partial (76%)
Length = 967
Score = 34.3 bits (77), Expect = 0.077
Identities = 36/160 (22%), Positives = 69/160 (42%), Gaps = 11/160 (6%)
Frame = +3
Query: 108 TLRLIILFPLLDRDPKDGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSFRE 167
+LRL +F + D++ D + E+ + LE ++S K G++ L++ +
Sbjct: 264 SLRLRRIFDMFDKNG-DSMITVEEISQALNLLGLEAEFKEVDSMIKSYIKPGNVGLTYED 440
Query: 168 -----------YLPDLSEKDIEKKNMAHGEAGWLMEKFDVADYDHNGLLNFTELRDFLHP 216
Y +E D E +N L E F V D D +G ++ EL+ L
Sbjct: 441 FVGLHESLGDTYFSVAAETDEETQNED------LWEAFKVFDEDGDGYISAKELQVVLGK 602
Query: 217 EDSQNKEMLKWMVNDKFNMDDYEHDGKINFNQFEDNVYVT 256
++ + ++D HDG+++F++F+D + T
Sbjct: 603 LGLVEGNLIDNVQRMILSVDT-NHDGRVDFHEFKDMMRTT 719
>AL382556 homologue to GP|169306|gb|AA calmodulin {Phytophthora infestans},
partial (49%)
Length = 476
Score = 32.7 bits (73), Expect = 0.22
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 190 LMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEMLKWMVNDKFNMDDYEHDGKINFNQF 249
+ E F V D D NG ++ ELR H + +++ V++ D + DG+IN+ +F
Sbjct: 32 IKEAFKVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 202
>TC88108 calmodulin-like protein 3 [Medicago truncatula]
Length = 905
Score = 29.6 bits (65), Expect = 1.9
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 81 TGLGSTTTVSEIKETYEYLTSGGTLNTTLR-LIILFPLLDRDPKDGFVGFNELESWVTQR 139
TGL T + GT++ T L+I F + D +GFV +EL ++T +
Sbjct: 252 TGLNPTDFGLMVARNKSATDGNGTIDFTKEELLIAFSKPNTD-HNGFVTASELHYYLTNQ 428
Query: 140 ALERLDYATQVELESKDKNGDLALSFREYL 169
++ + + D + D LSF+E++
Sbjct: 429 GIKATNEEVSDFVREADSDSDGHLSFKEFV 518
>AL382510 weakly similar to GP|13194672|gb| calmodulin-like protein
{Pennisetum ciliare}, partial (24%)
Length = 399
Score = 29.3 bits (64), Expect = 2.5
Identities = 19/64 (29%), Positives = 33/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 190 LMEKFDVADYDHNGLLNFTELR---DFLHPEDSQNKEMLKWMVNDKFNMDDYEHDGKINF 246
L+E F + D D +G ++ EL+ D L + + ++ MV + D DGK++F
Sbjct: 97 LLEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMNTIERMVK----VVDLNFDGKVDF 264
Query: 247 NQFE 250
+FE
Sbjct: 265 GEFE 276
>BG584659 weakly similar to GP|12963415|gb| regulator of gene silencing
{Nicotiana tabacum}, partial (34%)
Length = 677
Score = 28.9 bits (63), Expect = 3.2
Identities = 30/114 (26%), Positives = 55/114 (47%), Gaps = 1/114 (0%)
Frame = +3
Query: 124 DGFVGFNELESWVTQRALERLDYATQVELESKDKNGDLALSFREYLPDLSEKDIEKKNMA 183
DG + NEL S + + + E ++ +E+ D +GD LS + + L E E++ +
Sbjct: 216 DGKISPNELRSRMAKISGEFQLKEVEIAIEALDSDGDGLLSLEDLIA-LMESGGEEEKLK 392
Query: 184 HGEAGWLMEKFDVADYDHNGLLNFTELRDFLHP-EDSQNKEMLKWMVNDKFNMD 236
L E F++ D + G + L+ L DS++ E K M+ +F++D
Sbjct: 393 D-----LREAFEMYDDEGCGYITPKSLKRMLKKLGDSKSIEECKVMIK-RFDLD 536
>TC89961 GP|13561063|emb|CAA65500. protein kinase {Medicago sativa}, partial
(24%)
Length = 719
Score = 28.9 bits (63), Expect = 3.2
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 190 LMEKFDVADYDHNGLLNFTEL----RDFLHPEDSQNKEMLKWMVNDKFNMDDYEHDGKIN 245
L + F D D +G + EL +++ +D+ KE++ V+ + D +HDG+IN
Sbjct: 168 LYKAFQYFDKDSSGFITRDELETAMKEYGMGDDATIKEIIS-EVDTIISEVDTDHDGRIN 344
Query: 246 FNQF 249
+ +F
Sbjct: 345 YEEF 356
>TC87949 similar to GP|16904224|gb|AAL30819.1 calcium/calmodulin-dependent
protein kinase CaMK2 {Nicotiana tabacum}, partial (62%)
Length = 1413
Score = 28.9 bits (63), Expect = 3.2
Identities = 18/70 (25%), Positives = 34/70 (47%)
Frame = +1
Query: 265 TNGEGDIPTAKDKFAELDVNKDQFLSPEELFPIIPYVYPGELAYAKYYTSYLMNEADDNE 324
T EG++ KD+F +DV+K+ +S EE+ + P +L ++ ++ D N
Sbjct: 742 TLNEGELSDLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLE--ILQAIDSNT 915
Query: 325 DRKLTLDEML 334
D + E +
Sbjct: 916 DGLVDFTEFV 945
>TC89092 similar to GP|15011837|gb|AAK26164.2 calcium-dependent
calmodulin-independent protein kinase 5 {Cucumis
sativus}, partial (22%)
Length = 632
Score = 28.9 bits (63), Expect = 3.2
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +3
Query: 190 LMEKFDVADYDHNGLLNFTELRDFLHPEDSQNKEMLKWMVNDKFNMDDYEHDGKINFNQF 249
L + F+ D D +G + EL L + +++ +K ++++ D ++DG+IN+ +F
Sbjct: 135 LYKAFEYFDNDKSGYITKEELESALTKYNMGDEKTIKEIIDEV----DSDNDGRINYEEF 302
>TC92650 homologue to GP|2252842|gb|AAB62841.1| A_IG005I10.23 gene product
{Arabidopsis thaliana}, partial (2%)
Length = 760
Score = 28.5 bits (62), Expect = 4.2
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Frame = +2
Query: 257 YESYVDFETNGEGDIPTAKDKFAELDVNKDQFLSPEELFPIIPYVYPGELAYAKYYTSYL 316
+E V+ E NG DKF NKD+F + + P+ V ++A K
Sbjct: 170 HERNVERENNGSRGKTIGNDKFEMRSPNKDRFFTEKIARPMFDVVKGDKIATVKDSKFNA 349
Query: 317 MNEADDNE--------DRKLTLDEMLDH 336
E+ + + K L EMLD+
Sbjct: 350 QRESGSTKGKVSNIYVEAKKHLSEMLDN 433
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.315 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,054,467
Number of Sequences: 36976
Number of extensions: 107338
Number of successful extensions: 455
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of query: 360
length of database: 9,014,727
effective HSP length: 97
effective length of query: 263
effective length of database: 5,428,055
effective search space: 1427578465
effective search space used: 1427578465
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Medicago: description of AC149127.7