BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149080.12 - phase: 0
(400 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC83622 similar to GP|21592533|gb|AAM64482.1 unknown {Arabidopsi... 507 e-144
TC83507 similar to GP|21592533|gb|AAM64482.1 unknown {Arabidopsi... 323 6e-89
TC77173 similar to GP|15293109|gb|AAK93665.1 putative yeast pher... 92 4e-19
TC88796 similar to GP|13569554|gb|AAK31147.1 unknown {Arabidopsi... 82 3e-16
TC87246 similar to GP|15293109|gb|AAK93665.1 putative yeast pher... 78 5e-15
TC88390 similar to GP|13272457|gb|AAK17167.1 unknown protein {Ar... 54 8e-08
TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-inf... 40 0.002
TC80134 GP|7295572|gb|AAF50883.1| shakB gene product {Drosophila... 39 0.004
TC77489 MTD1 38 0.008
TC91964 similar to GP|23496165|gb|AAN35825.1 hypothetical protei... 37 0.013
BG584373 similar to GP|4056491|gb|A unknown protein {Arabidopsis... 36 0.030
AW573695 weakly similar to GP|10177655|db gb|AAD43171.1~gene_id:... 35 0.051
BM779021 homologue to PIR|T05883|T058 ATP-dependent helicase F6H... 35 0.051
TC78535 similar to GP|15028361|gb|AAK76657.1 unknown protein {Ar... 34 0.11
BG646240 similar to GP|18491263|gb| F14N22.7/F14N22.7 {Arabidops... 33 0.15
AL369166 similar to GP|3341693|gb|A unknown protein {Arabidopsis... 33 0.15
BI263347 33 0.25
BI273325 homologue to GP|4105790|gb|AA PGPS/D10 {Petunia x hybri... 33 0.25
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 33 0.25
BQ155455 similar to GP|21553697|gb| unknown {Arabidopsis thalian... 32 0.33
>TC83622 similar to GP|21592533|gb|AAM64482.1 unknown {Arabidopsis
thaliana}, partial (22%)
Length = 1066
Score = 507 bits (1306), Expect = e-144
Identities = 251/251 (100%), Positives = 251/251 (100%)
Frame = +3
Query: 150 GEVVVVRGRDLRLRDKSVRRRTRSMSPLRNNSHLEWTENEDDNNNKNNVACEIEDEMNNK 209
GEVVVVRGRDLRLRDKSVRRRTRSMSPLRNNSHLEWTENEDDNNNKNNVACEIEDEMNNK
Sbjct: 9 GEVVVVRGRDLRLRDKSVRRRTRSMSPLRNNSHLEWTENEDDNNNKNNVACEIEDEMNNK 188
Query: 210 NNENGNDCSEMENVKVDEMGLERIEITPLDSASSSRSSSAGRSSKRWVFLKDFLRSKSEG 269
NNENGNDCSEMENVKVDEMGLERIEITPLDSASSSRSSSAGRSSKRWVFLKDFLRSKSEG
Sbjct: 189 NNENGNDCSEMENVKVDEMGLERIEITPLDSASSSRSSSAGRSSKRWVFLKDFLRSKSEG 368
Query: 270 RSNNKFWSTISFSPTKDKKSSSNNQNLQAQISKEKTCETQRNGSSSSSSSSSKGSWGKKM 329
RSNNKFWSTISFSPTKDKKSSSNNQNLQAQISKEKTCETQRNGSSSSSSSSSKGSWGKKM
Sbjct: 369 RSNNKFWSTISFSPTKDKKSSSNNQNLQAQISKEKTCETQRNGSSSSSSSSSKGSWGKKM 548
Query: 330 TGKPMNGVGKRRVPPSPHELHYKANRAQAEELRRKTFLPYRQGLLGCLGFSSKGYGAMNG 389
TGKPMNGVGKRRVPPSPHELHYKANRAQAEELRRKTFLPYRQGLLGCLGFSSKGYGAMNG
Sbjct: 549 TGKPMNGVGKRRVPPSPHELHYKANRAQAEELRRKTFLPYRQGLLGCLGFSSKGYGAMNG 728
Query: 390 FARALNPVSSR 400
FARALNPVSSR
Sbjct: 729 FARALNPVSSR 761
>TC83507 similar to GP|21592533|gb|AAM64482.1 unknown {Arabidopsis
thaliana}, partial (15%)
Length = 544
Score = 323 bits (829), Expect = 6e-89
Identities = 160/161 (99%), Positives = 160/161 (99%)
Frame = +2
Query: 1 MELQNSTKNPNLEPSNSNNGGETFFEDIDSNCSTPYVSAPSSPGRGGGPPPISSGYFYSA 60
MELQNSTKNPNLEPSNSNNGGETFFEDIDSNCSTPYVSAPSSPGRGGGPPPISSGYFYSA
Sbjct: 62 MELQNSTKNPNLEPSNSNNGGETFFEDIDSNCSTPYVSAPSSPGRGGGPPPISSGYFYSA 241
Query: 61 PASPLHFSITASSSYHHQTTTSSVPMSYEFEFSARFGSTGSAASGSMTSADELFLNGQIR 120
PASPLHFSITASSSYHHQTTTSSVPMSYEFEFSARFGSTGSAASGSMTSADELFLNGQIR
Sbjct: 242 PASPLHFSITASSSYHHQTTTSSVPMSYEFEFSARFGSTGSAASGSMTSADELFLNGQIR 421
Query: 121 PMKLSSHLERPQVLAPLLDLEEEEEDEEEGEVVVVRGRDLR 161
PMKLSSHLERPQVLAPLLDLEEEEEDEEEGEVVVVRG DLR
Sbjct: 422 PMKLSSHLERPQVLAPLLDLEEEEEDEEEGEVVVVRGXDLR 544
>TC77173 similar to GP|15293109|gb|AAK93665.1 putative yeast pheromone
receptor protein AR781 {Arabidopsis thaliana}, partial
(20%)
Length = 1380
Score = 92.0 bits (227), Expect = 4e-19
Identities = 104/381 (27%), Positives = 162/381 (42%), Gaps = 11/381 (2%)
Frame = +3
Query: 8 KNPNLEPSNSNNGGETFFEDIDSNCSTPYVSAPSSPGRGGGPPPISSGYFYSAPASPLHF 67
++ N++ N N+G S+PY+S PSSP R G ++ SAP+SP
Sbjct: 138 QSSNMDTFNFNSG----------TMSSPYLSPPSSPKRFGE-------FYLSAPSSPSRL 266
Query: 68 SITASS----SYHHQTTTSS-----VPMSYEFEFSARFGSTGSAASGSMTSADELFLNGQ 118
S S S QT++++ V + + F + S SA+ELF G+
Sbjct: 267 SELYSEMDYLSIIDQTSSNNKNSNVVDEDDDSQGGFAFSVNHESNKSSTRSAEELFHGGK 446
Query: 119 IRPMKLSSHLERPQVLAPLLDLEEEEEDEEEGEVVVVRGRDLRLRDKSVRRRTRSMSPLR 178
I+P E +V+ P +++ +DE G R R + S RR +RS SP R
Sbjct: 447 IKPFTN----EEAKVVVP--KKQQKVQDERRGRE---RERIESSLNNSGRRSSRSHSPYR 599
Query: 179 NNSHLEWTENEDDNNNKNNVACEIEDEMNNKNNENGNDCSEMENVKVDEMGLERIEITPL 238
K+N E+E++ + K + S E K+
Sbjct: 600 ----------------KSNYISELEEQNSQKQQQPR---SNKEESKI------------- 683
Query: 239 DSASSSRSSSAGRSSKRWVFLKDFL--RSKSEGRSNNKFWSTISFSPTKDKKSSSNNQNL 296
S SS+ S + S+RW L D L RS SEGR ++K P K
Sbjct: 684 -SNSSTGPGSISKGSRRWK-LSDLLLFRSASEGRGSSK-------DPLK----------- 803
Query: 297 QAQISKEKTCETQRNGSSSSSSSSSKGSWGKKMTGKPMNGVGKRRVPPSPHELHYKANRA 356
+ + +K + GSSS SS S G + ++ S HE+HY +A
Sbjct: 804 KYFVGYKKNTSEEVKGSSSFRSSDSFSHHGSR-----------KKAQVSAHEMHYAMKKA 950
Query: 357 QAEELRRKTFLPYRQGLLGCL 377
++++++++TFLPYRQG+LG L
Sbjct: 951 ESQDMKKRTFLPYRQGILGRL 1013
>TC88796 similar to GP|13569554|gb|AAK31147.1 unknown {Arabidopsis
thaliana}, partial (32%)
Length = 1174
Score = 82.4 bits (202), Expect = 3e-16
Identities = 62/186 (33%), Positives = 102/186 (54%), Gaps = 14/186 (7%)
Frame = +1
Query: 27 DIDSNCSTPYVSAPSSPGRGGGPPPISSGYFYSAPASPLHFSITASSS---YHHQTTTSS 83
+ DSNCS+PY++APSSP R ++ +F+SAP SP S S S +H +T ++
Sbjct: 91 NFDSNCSSPYITAPSSPQR------FANNFFFSAPTSPSRVSPLFSESSLPFHQETKPNN 252
Query: 84 VPMSYEF--EFSARFGSTGSAASGSMTSADELFLNGQIRPMK-LSSHLERPQVLAPLLDL 140
+Y F + F +G+ S+++ADELF G+IRPMK L + R + + D
Sbjct: 253 HHNNYSFGNDDDFEFDFSGNLQKESLSAADELFDGGKIRPMKPLPPNSPRTRKKKAVHDN 432
Query: 141 EEEEEDEEEG--EVVVVRGRDLRLRDK---SVRRRTRSMSPLRNNSHLEWTENED---DN 192
E + + E E + + + R R++ S R+ +RS+SPLR + +E +E++D +
Sbjct: 433 TERDSNPFEAAIEETLRKEEEKRGRERVTSSGRKGSRSLSPLRVSDIIENSEDKDVSVSS 612
Query: 193 NNKNNV 198
+ NNV
Sbjct: 613 STSNNV 630
Score = 60.8 bits (146), Expect = 9e-10
Identities = 34/89 (38%), Positives = 48/89 (53%)
Frame = +2
Query: 294 QNLQAQISKEKTCETQRNGSSSSSSSSSKGSWGKKMTGKPMNGVGKRRVPPSPHELHYKA 353
++ QA K + RN S S+ SS S +RR P S HE+H
Sbjct: 737 ESTQALAKKSVVEDEVRNSSFRSNESSGSFS--------------RRRGPVSAHEIHCTI 874
Query: 354 NRAQAEELRRKTFLPYRQGLLGCLGFSSK 382
NRA EE++++TFLPY++GLLGCLG ++
Sbjct: 875 NRAVTEEMKKRTFLPYKRGLLGCLGSDNR 961
>TC87246 similar to GP|15293109|gb|AAK93665.1 putative yeast pheromone
receptor protein AR781 {Arabidopsis thaliana}, partial
(26%)
Length = 1026
Score = 78.2 bits (191), Expect = 5e-15
Identities = 98/373 (26%), Positives = 144/373 (38%), Gaps = 21/373 (5%)
Frame = +1
Query: 26 EDIDSNCSTPYVSAPSSPGRGGGPPPISSGYFYSAPASPLHFSITASSSYHHQTTTSSVP 85
+ D N +PY+S PSSP R G ++ SAP SP F
Sbjct: 112 DHFDFNRISPYLSTPSSPKRFG------EDFYLSAPTSPSRFF----------------- 222
Query: 86 MSYEFEFSARFGSTGSAASGSMTSADELFLNGQIRPMKLS-SHLERPQ------------ 132
+E E + S + S SA+ELF G I+P++ + S L P
Sbjct: 223 SQFEDEDAGFAFSVHRESDSSPRSAEELFHGGVIKPLESAKSPLLSPNRVKKSPIAKGKK 402
Query: 133 -VLAPLLDLEEEEEDEEEGEVVVVRGRDLRLRDK-----SVRRRTRSMSPLRNNSHLEWT 186
++ +++ GE RGRD + S RR TRS SP R + + W
Sbjct: 403 AIMEAFSPKNKKDSSLGNGER---RGRDRTPASEFSSSNSGRRVTRSHSPYRTSQYT-WV 570
Query: 187 ENEDDNNNKNNVACEIEDEMNNKNNENGNDCSEMENVKVDEMGLERIEITPLDSASSSRS 246
E + + +I DS S ++
Sbjct: 571 EEQQQHKQS--------------------------------------QINKEDSVESVQT 636
Query: 247 SSAGRSSKRWVFLKDFL--RSKSEGRSNNKFWSTISFSPTKDKKSSSNNQNLQAQISKEK 304
S+ +SS+ W L+DFL RS SEGR +K P + + +S K
Sbjct: 637 VSSSKSSRIWR-LRDFLLFRSASEGRGTSK-------DPFR-----------KFPVSYNK 759
Query: 305 TCETQRNGSSSSSSSSSKGSWGKKMTGKPMNGVGKRRVPPSPHELHYKANRAQAEELRRK 364
+ GSSS SS +K +G S HELHY +A++E+L+++
Sbjct: 760 KLSEEGKGSSSPFRSSEIPRPRRKDSGV------------SAHELHYARKKAESEDLKKR 903
Query: 365 TFLPYRQGLLGCL 377
TFLPY+QG+LG L
Sbjct: 904 TFLPYKQGILGRL 942
>TC88390 similar to GP|13272457|gb|AAK17167.1 unknown protein {Arabidopsis
thaliana}, partial (11%)
Length = 976
Score = 54.3 bits (129), Expect = 8e-08
Identities = 69/249 (27%), Positives = 103/249 (40%), Gaps = 28/249 (11%)
Frame = +2
Query: 165 KSVRRRTRSMSPLRNNSHLEWTENEDDNNNKNNVACE-IEDEMNNKNN--ENGNDCSEME 221
+S+ +T S SPL S + E+D +K + E IE+E +K+ E D E
Sbjct: 68 QSLTMQTVSTSPLSEVSR----KFENDFFSKLKIEDEKIENENEDKHEVEEEDEDDDEFT 235
Query: 222 NVKVDEMG--------LERIEITP--------LDSASSSRSSSAGRSSKRWVFLKDFLRS 265
V D G ++ +I P L + S RS R F++ S
Sbjct: 236 FVFADPKGSPISADDVFDKGQIRPIFPFFGQDLHFTDDYDNESGNRSPVRKFFVESPSSS 415
Query: 266 KSEGRSNNKFWSTISFSPTKDKKSSSNNQNLQAQI--------SKEKTCETQRNGSSSSS 317
K+ S + ++P K KS+S + ++ S K N S
Sbjct: 416 KTATSSAAVEGTYCEWNPKKAVKSNSTGSSKLWKLRDPKLRSNSDGKDAFVFLNPSKVEK 595
Query: 318 SSSSKGSWGKKMTGKPMNGVGKRRVP-PSPHELHYKANRAQAEELRRKTFLPYRQGLLGC 376
+SSS G + K GK+ P PS HE HY ++A+ E +RK++LPYRQ L G
Sbjct: 596 TSSSAGETKNDVVKKVKMVKGKKAAPAPSAHEKHYVMSKARKENDKRKSYLPYRQELFGF 775
Query: 377 LGFSSKGYG 385
S+ G G
Sbjct: 776 FA-STNGLG 799
>TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-infected
erythrocyte surface antigen {Plasmodium falciparum},
partial (2%)
Length = 2007
Score = 39.7 bits (91), Expect = 0.002
Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 6/186 (3%)
Frame = +1
Query: 142 EEEEDEEEGEVVVVRGRDLRLRDKSVRRRTRSMSPLRNNSHLEWTENEDDNNNKNNVACE 201
EE +DEE+ + +D +KS + + E TE + N+
Sbjct: 211 EENKDEEKSQQENEENKD---EEKSQQENELKKNEGGEKETGEITEEKSKQENEETSETN 381
Query: 202 IEDEMNNKNNENGNDCSEM--ENVKVD-EMGLERIEITPLDSASSSRSSSAGRSSKRWVF 258
+D+ N ++N+NG+D E EN + D + G E T SS V
Sbjct: 382 SKDKENEESNQNGSDAKEQVGENHEQDSKQGTEETNGTEGGEKEEHDKIKEDTSSDNQV- 558
Query: 259 LKDFLRSKSEGRSNNKFWSTISFSPTKDKKSSSNNQNLQAQISKEKT---CETQRNGSSS 315
+E R N S + +K S+N+ + KEK E+Q+N + +
Sbjct: 559 --QDGEKNNEAREENYSGDNASSAVVDNKSQESSNKTEEQFDKKEKNEFELESQKNSNET 732
Query: 316 SSSSSS 321
+ S+ S
Sbjct: 733 TESTDS 750
Score = 32.3 bits (72), Expect = 0.33
Identities = 42/192 (21%), Positives = 74/192 (37%), Gaps = 5/192 (2%)
Frame = +1
Query: 142 EEEEDEEEGEVVVVRGRDLRLRDKSVRRRTRSMSPLRNNSHLEWTENEDDNNNKNNVACE 201
E EE +E GE + L ++ + S SHLE EN+D+ +K E
Sbjct: 19 ENEESKETGESSEEKSH---LENEESKETGESSE---EKSHLENEENKDEEKSKQENE-E 177
Query: 202 IED-----EMNNKNNENGNDCSEMENVKVDEMGLERIEITPLDSASSSRSSSAGRSSKRW 256
I+D + N +N + E E K +E + E+ + G ++
Sbjct: 178 IKDGEKIQQENEENKDEEKSQQENEENKDEEKSQQENEL----KKNEGGEKETGEITEE- 342
Query: 257 VFLKDFLRSKSEGRSNNKFWSTISFSPTKDKKSSSNNQNLQAQISKEKTCETQRNGSSSS 316
+SK E ++ + +KDK++ +NQN +KE+ E S
Sbjct: 343 -------KSKQENEETSE-------TNSKDKENEESNQN--GSDAKEQVGENHEQDSKQG 474
Query: 317 SSSSSKGSWGKK 328
+ ++ G+K
Sbjct: 475 TEETNGTEGGEK 510
>TC80134 GP|7295572|gb|AAF50883.1| shakB gene product {Drosophila
melanogaster}, partial (2%)
Length = 828
Score = 38.9 bits (89), Expect = 0.004
Identities = 48/182 (26%), Positives = 77/182 (41%)
Frame = -3
Query: 89 EFEFSARFGSTGSAASGSMTSADELFLNGQIRPMKLSSHLERPQVLAPLLDLEEEEEDEE 148
EFEF+ + + + S+ SAD++F NGQI+P+ P+ D + D++
Sbjct: 502 EFEFAV---VSRDSTNFSVVSADDIFYNGQIKPLYY-----------PVFD-QNLLNDDD 368
Query: 149 EGEVVVVRGRDLRLRDKSVRRRTRSMSPLRNNSHLEWTENEDDNNNKNNVACEIEDEMNN 208
+G V V + + RRR PLR E +E ++ + + ++E
Sbjct: 367 DGVVSSVSPVP---NETTTRRRL----PLRTLMFEESSEATASCSSSTDESIDLEGVAE- 212
Query: 209 KNNENGNDCSEMENVKVDEMGLERIEITPLDSASSSRSSSAGRSSKRWVFLKDFLRSKSE 268
G+ C N +G+ER +SSSAG S RW LRS S+
Sbjct: 211 -----GSYCVWNPN----SVGIER-----------KKSSSAGSGSNRWKLRNLLLRSHSD 92
Query: 269 GR 270
G+
Sbjct: 91 GK 86
>TC77489 MTD1
Length = 988
Score = 37.7 bits (86), Expect = 0.008
Identities = 25/70 (35%), Positives = 34/70 (47%)
Frame = +2
Query: 17 SNNGGETFFEDIDSNCSTPYVSAPSSPGRGGGPPPISSGYFYSAPASPLHFSITASSSYH 76
SN+ + F DS ST Y SAPSSP PP G S+ ASPL + + + H
Sbjct: 596 SNSDSSSSFTSDDSATSTSYSSAPSSP-----LPPRHPGNRVSSLASPLQRNFFSLADLH 760
Query: 77 HQTTTSSVPM 86
H +++ M
Sbjct: 761 HCAIAATMKM 790
>TC91964 similar to GP|23496165|gb|AAN35825.1 hypothetical protein
{Plasmodium falciparum 3D7}, partial (1%)
Length = 827
Score = 37.0 bits (84), Expect = 0.013
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Frame = +1
Query: 181 SHLEWTENEDDNNNKNNVACEIEDEMNNKNNENGNDCSEMENVKVDEMGLERIEITPLDS 240
S +++EN +DNNN N+ + ++E NN N GN+ + + N +P +
Sbjct: 397 STTDFSENNNDNNNNNDKNNDNDNENNNDNGGGGNESASLLNTS-----------SPPSA 543
Query: 241 ASSSRSSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSTISFSPTKDKKSSS----NNQNL 296
+ S G ++ + + + + G + S IS S SS NNQ+L
Sbjct: 544 VPPTTSGDDGDNN-----FTNVIDNGNTGNTGEITTSDISTSEDNQMVISSNEPENNQSL 708
Query: 297 QAQ 299
+AQ
Sbjct: 709 EAQ 717
>BG584373 similar to GP|4056491|gb|A unknown protein {Arabidopsis thaliana},
partial (11%)
Length = 767
Score = 35.8 bits (81), Expect = 0.030
Identities = 26/90 (28%), Positives = 38/90 (41%)
Frame = +1
Query: 45 RGGGPPPISSGYFYSAPASPLHFSITASSSYHHQTTTSSVPMSYEFEFSARFGSTGSAAS 104
R G P + P+SP H S ++SSS + T S P +S
Sbjct: 40 RWGRKEPKTEQNHTPLPSSPSHDSFSSSSSSDFEFTISISPRK---------------SS 174
Query: 105 GSMTSADELFLNGQIRPMKLSSHLERPQVL 134
++ ADELF GQ+ P+ LS + + L
Sbjct: 175 NTLCPADELFYKGQLLPLHLSPRISMVRTL 264
Score = 28.1 bits (61), Expect = 6.3
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 10/119 (8%)
Frame = +1
Query: 2 ELQNSTKNPNLEPSNSNNGGETFFEDIDSNCSTPYVSAPS-SPGRGGGPPPISSGYFYSA 60
EL+ K P E +++ + S+ S+ + S SP + + FY
Sbjct: 34 ELRWGRKEPKTEQNHTPLPSSPSHDSFSSSSSSDFEFTISISPRKSSNTLCPADELFYKG 213
Query: 61 PASPLHFS---------ITASSSYHHQTTTSSVPMSYEFEFSARFGSTGSAASGSMTSA 110
PLH S + +SSS T++S+ P STGS+AS T++
Sbjct: 214 QLLPLHLSPRISMVRTLLLSSSSTSSATSSSTAPRD----------STGSSASNDSTTS 360
>AW573695 weakly similar to GP|10177655|db
gb|AAD43171.1~gene_id:MAC12.15~similar to unknown
protein {Arabidopsis thaliana}, partial (38%)
Length = 652
Score = 35.0 bits (79), Expect = 0.051
Identities = 25/68 (36%), Positives = 35/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 167 VRRRTRSMSPLRN-NSHLEWTENEDDNNNKNNVACEIEDEMNNKNNENGNDCSEMENVKV 225
+RRR R+ S R SH T N NN+ NN + NN N N N S+++N K
Sbjct: 421 IRRRRRTSSGQRLVRSHSSNTTNRGRNNSINN-------QHNNHNQHNINHKSKIKNSKR 263
Query: 226 DEMGLERI 233
++GL +I
Sbjct: 262 SKLGLIKI 239
>BM779021 homologue to PIR|T05883|T058 ATP-dependent helicase F6H11.20 -
Arabidopsis thaliana, partial (9%)
Length = 492
Score = 35.0 bits (79), Expect = 0.051
Identities = 26/90 (28%), Positives = 41/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 166 SVRRRTRSMSPLRNNSHLEWTENEDDNNNKNNVACEIEDEMNNKNNENGND-CSEMENVK 224
S +++ + + + + LE E E KNN E EDE N+++GND E+E K
Sbjct: 51 SYKKKNKKLRKRKRSRKLE-QELEKQQKEKNNENTESEDEEEENNDKDGNDVVEEVEEKK 227
Query: 225 VDEMGLERIEITPLDSASSSRSSSAGRSSK 254
V+ + P S+ SS G S +
Sbjct: 228 VE-------NVLPSGILSTESFSSLGLSER 296
Score = 28.1 bits (61), Expect = 6.3
Identities = 13/47 (27%), Positives = 26/47 (54%), Gaps = 2/47 (4%)
Frame = +3
Query: 161 RLRDKSVRRRTRSMSPLRNNSHLEWTENEDDNNNK--NNVACEIEDE 205
R R + + + +NN + E + E++NN+K N+V E+E++
Sbjct: 84 RKRSRKLEQELEKQQKEKNNENTESEDEEEENNDKDGNDVVEEVEEK 224
>TC78535 similar to GP|15028361|gb|AAK76657.1 unknown protein {Arabidopsis
thaliana}, partial (39%)
Length = 1295
Score = 33.9 bits (76), Expect = 0.11
Identities = 27/85 (31%), Positives = 36/85 (41%), Gaps = 3/85 (3%)
Frame = +3
Query: 232 RIEITP---LDSASSSRSSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSTISFSPTKDKK 288
R+E+ P + S SSRS+S G S R + R NN + SF
Sbjct: 849 RVELPPQGQMSSRGSSRSNSGGNGSSR---------GRESDRPNNGRRNPFSFLWPFRSS 1001
Query: 289 SSSNNQNLQAQISKEKTCETQRNGS 313
SS+NNQ + S T Q NG+
Sbjct: 1002SSNNNQYSETGGSSSSTNADQNNGT 1076
>BG646240 similar to GP|18491263|gb| F14N22.7/F14N22.7 {Arabidopsis
thaliana}, partial (26%)
Length = 775
Score = 33.5 bits (75), Expect = 0.15
Identities = 21/93 (22%), Positives = 47/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 178 RNNSHLEWTENEDDNNNKNNVACEIEDEMNNK----NNENGNDCSEMENVKVDEMGLERI 233
++ H E T ++NK +++ ++ +E + NNE ++ + E V + E++
Sbjct: 210 KSEEHGEDTSMGSSSHNKCSISFDLNEEASRSDQDVNNEENDEACDHELVNNGDDDDEKL 389
Query: 234 EITPLDSASSSRSSSAGRSSKRWVFLKDFLRSK 266
+ +SSS S+G + +R ++ ++RSK
Sbjct: 390 AKDDDEGSSSSTKRSSGSNERRRNGVRQYVRSK 488
>AL369166 similar to GP|3341693|gb|A unknown protein {Arabidopsis thaliana},
partial (13%)
Length = 505
Score = 33.5 bits (75), Expect = 0.15
Identities = 23/102 (22%), Positives = 51/102 (49%), Gaps = 1/102 (0%)
Frame = +2
Query: 107 MTSADELFLNGQIRPMKLSSHLERPQVLAPLLDLE-EEEEDEEEGEVVVVRGRDLRLRDK 165
M +A ++ +G +R ++ + R ++ +++E + E E + +V + +K
Sbjct: 5 MVNAIKVLRDGFVRMEQMKMEMAR-EIETMRMEMEMKRTEMILESQQRIVEAFAKAISEK 181
Query: 166 SVRRRTRSMSPLRNNSHLEWTENEDDNNNKNNVACEIEDEMN 207
+ +R+ R + + NN + N ++NNN NN+A E +N
Sbjct: 182 NKKRKLRKGNTINNNDNNIINNNGNNNNNNNNIASPSES*IN 307
>BI263347
Length = 582
Score = 32.7 bits (73), Expect = 0.25
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Frame = +2
Query: 240 SASSSRSSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSTISFSPTKDKKSS------SNN 293
S S +S++ GRS +D +S S GRS N T S ++ + + S
Sbjct: 71 SGSRDKSNTRGRSENTRSGSRD--KSDSRGRSENTRSGTRDKSDSRSRTENARSGTKSGK 244
Query: 294 QNLQAQISKEKTCETQRNGSSSSSSSSSKGSWGKKMTGK 332
Q+ ++ +K K ++ SSS+SS K S K TGK
Sbjct: 245 QSTPSKFTK-KGFTVSKSVKSSSTSSFKKASSDDKRTGK 358
>BI273325 homologue to GP|4105790|gb|AA PGPS/D10 {Petunia x hybrida}, partial
(21%)
Length = 482
Score = 32.7 bits (73), Expect = 0.25
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +2
Query: 263 LRSKSEGRSNNKFWSTISFSPTKDKKSSSNNQNLQAQISKEKT-------CETQRNGSSS 315
+ S+S+ ++ + TIS SPT + S++ + Q T C R+ SSS
Sbjct: 47 MASQSQPKTQSNL--TISTSPTSESGSNTTTPLPKGQXLCSPTTHEGSFRCRLHRS-SSS 217
Query: 316 SSSSSSKGSWGKKMTGKPMN 335
SSSSSS +W K+ P N
Sbjct: 218 SSSSSSTSTWMKRNKSMPNN 277
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 32.7 bits (73), Expect = 0.25
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -3
Query: 278 TISFSPTKDKKSSSNNQNLQAQISKEKTCETQRNGSSSSSSSSSKGS 324
+IS S SSS++ + + S +C + + SSSSSSSSS S
Sbjct: 256 SISSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSCSS 116
Score = 32.0 bits (71), Expect = 0.43
Identities = 28/92 (30%), Positives = 42/92 (45%)
Frame = -3
Query: 229 GLERIEITPLDSASSSRSSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSTISFSPTKDKK 288
G R+ I + S+S S SSS+ SS S S S++ S+ S S
Sbjct: 280 GSGRVLILSISSSSPSSSSSSSSSS-----------SSSSSSSSSSSCSSSSSS------ 152
Query: 289 SSSNNQNLQAQISKEKTCETQRNGSSSSSSSS 320
SSS++ + S +C + + +S SSSSS
Sbjct: 151 SSSSSSSSSCSSSSSSSCSSSSSSTSPSSSSS 56
Score = 31.2 bits (69), Expect = 0.74
Identities = 18/62 (29%), Positives = 31/62 (49%)
Frame = -3
Query: 263 LRSKSEGRSNNKFWSTISFSPTKDKKSSSNNQNLQAQISKEKTCETQRNGSSSSSSSSSK 322
+ S S S++ S+ S S + S S++ + + S +C + + S SSSSSS+
Sbjct: 253 ISSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSCSSSSSSSCSSSSSSTS 74
Query: 323 GS 324
S
Sbjct: 73 PS 68
Score = 30.0 bits (66), Expect = 1.6
Identities = 22/76 (28%), Positives = 32/76 (41%), Gaps = 6/76 (7%)
Frame = -3
Query: 255 RWVFLKDFLRSKSEGRSNNK------FWSTISFSPTKDKKSSSNNQNLQAQISKEKTCET 308
R + + L + E NN S S SP+ SSS++ + + S +
Sbjct: 340 RLIVATEVLVGRKESICNNSGSGRVLILSISSSSPSSSSSSSSSSSSSSSSSSSSSCSSS 161
Query: 309 QRNGSSSSSSSSSKGS 324
+ SSSSSSSS S
Sbjct: 160 SSSSSSSSSSSSCSSS 113
>BQ155455 similar to GP|21553697|gb| unknown {Arabidopsis thaliana}, partial
(29%)
Length = 655
Score = 32.3 bits (72), Expect = 0.33
Identities = 23/67 (34%), Positives = 31/67 (45%), Gaps = 1/67 (1%)
Frame = +1
Query: 265 SKSEGRSNNKFWSTISFSPTKDKKSSSNNQNLQAQISKEKTCETQRNGSSSSSSSSSKG- 323
SK E SN + FS + + SS+N L + +K+ T N + S S S K
Sbjct: 118 SKKEKSSNTSSTKSSLFSRSCSTRGSSSNSPLLLKSFSQKSSSTSNNSGNLSRSYSQKNP 297
Query: 324 SWGKKMT 330
S GKK T
Sbjct: 298 SIGKKCT 318
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.307 0.125 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,832,307
Number of Sequences: 36976
Number of extensions: 208965
Number of successful extensions: 2701
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 2002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2386
length of query: 400
length of database: 9,014,727
effective HSP length: 98
effective length of query: 302
effective length of database: 5,391,079
effective search space: 1628105858
effective search space used: 1628105858
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC149080.12