TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149079.7 + phase: 0 
         (190 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86803 similar to GP|20197531|gb|AAD15447.2 expressed protein {...   372  e-104
TC92026 similar to PIR|H84830|H84830 hypothetical protein At2g40...    27  3.7
BF648203 similar to GP|9759468|dbj| gene_id:MAF19.22~unknown pro...    27  6.3
TC83083                                                                26  8.2
TC79021 similar to GP|14090343|dbj|BAB55502. contains EST C98129...    26  8.2

>TC86803 similar to GP|20197531|gb|AAD15447.2 expressed protein {Arabidopsis
           thaliana}, partial (57%)
          Length = 1545

 Score =  372 bits (954), Expect = e-104
 Identities = 188/188 (100%), Positives = 188/188 (100%)
 Frame = +2

Query: 3   KMHYLDALHMSTAKLDGVAAQLSLFVIWCTTN*CHLMLHMNM*SQFVQGCF*LLLSGKLS 62
           KMHYLDALHMSTAKLDGVAAQLSLFVIWCTTN*CHLMLHMNM*SQFVQGCF*LLLSGKLS
Sbjct: 800 KMHYLDALHMSTAKLDGVAAQLSLFVIWCTTN*CHLMLHMNM*SQFVQGCF*LLLSGKLS 979

Query: 63  RNTTATLL*GGLLDLHPQLNYL*RLLSLQQLHKILYLLMTIL*LW*QSKISKDTTQVVNQ 122
           RNTTATLL*GGLLDLHPQLNYL*RLLSLQQLHKILYLLMTIL*LW*QSKISKDTTQVVNQ
Sbjct: 980 RNTTATLL*GGLLDLHPQLNYL*RLLSLQQLHKILYLLMTIL*LW*QSKISKDTTQVVNQ 1159

Query: 123 IPRQEKYGQI*VLFTVCELLDRQHWLEYHAFGCDMVPTRRYLREN*AWKTVAQSELITWE 182
           IPRQEKYGQI*VLFTVCELLDRQHWLEYHAFGCDMVPTRRYLREN*AWKTVAQSELITWE
Sbjct: 1160IPRQEKYGQI*VLFTVCELLDRQHWLEYHAFGCDMVPTRRYLREN*AWKTVAQSELITWE 1339

Query: 183 KLMLISMC 190
           KLMLISMC
Sbjct: 1340KLMLISMC 1363


>TC92026 similar to PIR|H84830|H84830 hypothetical protein At2g40550
           [imported] - Arabidopsis thaliana, partial (9%)
          Length = 477

 Score = 27.3 bits (59), Expect = 3.7
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -3

Query: 55  LLLSGKLSRNTTATLL*GGLLDLHPQLNYL*RLL 88
           L L+GK SRNT    +* G++ L P  N   RLL
Sbjct: 376 LSLNGKKSRNTFFMTI*NGIILLLPHFNLWNRLL 275


>BF648203 similar to GP|9759468|dbj| gene_id:MAF19.22~unknown protein
           {Arabidopsis thaliana}, partial (29%)
          Length = 526

 Score = 26.6 bits (57), Expect = 6.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 135 LFTVCELLDRQHWLEYHAFG 154
           LFTVC +L  Q W  YH FG
Sbjct: 421 LFTVCTMLCSQVW-NYHCFG 477


>TC83083 
          Length = 732

 Score = 26.2 bits (56), Expect = 8.2
 Identities = 17/51 (33%), Positives = 22/51 (42%)
 Frame = +3

Query: 3   KMHYLDALHMSTAKLDGVAAQLSLFVIWCTTN*CHLMLHMNM*SQFVQGCF 53
           K  Y+  LH+  A L GVA +L L            + H NM*   + G F
Sbjct: 540 KYPYIIVLHLMGANLVGVAQRLGLRASLPVLRGGRFVAHENM*DTHMNGLF 692


>TC79021 similar to GP|14090343|dbj|BAB55502. contains EST
           C98129(C0752)~unknown protein {Oryza sativa (japonica
           cultivar-group)}, partial (36%)
          Length = 1386

 Score = 26.2 bits (56), Expect = 8.2
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 18  DGVAAQLSLFVIWCTTN*CHLMLHMNM*SQFVQGCF*LLLSGKLSRNTTA 67
           +G   Q   FVIW  T+  HL+L  +      Q C+*   SG+L +  T+
Sbjct: 622 EGGGVQQLCFVIWLNTSI*HLLLPWSTCDLEDQECY*HRHSGRLFKIITS 771


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.353    0.154    0.539 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,105,518
Number of Sequences: 36976
Number of extensions: 80253
Number of successful extensions: 779
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of query: 190
length of database: 9,014,727
effective HSP length: 91
effective length of query: 99
effective length of database: 5,649,911
effective search space: 559341189
effective search space used: 559341189
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 55 (25.8 bits)