BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149050.15 + phase: 0
(235 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77464 similar to GP|13272433|gb|AAK17155.1 unknown protein {Ar... 469 e-133
BQ135897 similar to GP|13272433|gb| unknown protein {Arabidopsis... 67 8e-12
TC88120 similar to GP|21593100|gb|AAM65049.1 unknown {Arabidopsi... 51 3e-07
TC84329 similar to PIR|C86480|C86480 hypothetical protein AAG282... 44 4e-05
TC76413 similar to GP|3461820|gb|AAC32914.1| unknown protein {Ar... 39 0.002
TC85276 weakly similar to GP|22294973|dbj|BAC08801. ORF_ID:tlr12... 33 0.12
AW776010 similar to GP|13877535|gb Unknown protein {Arabidopsis ... 32 0.16
BF632455 similar to GP|10177552|dbj anthocyanin acyltransferase-... 32 0.28
TC87086 similar to SP|Q41001|BCP_PEA Blue copper protein precurs... 32 0.28
BQ141682 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 32 0.28
BE325044 similar to GP|18087570|gb| AT3g54650/T5N23_10 {Arabidop... 30 0.61
BQ151354 homologue to GP|860970|emb|C HP8 peptide {Homo sapiens}... 30 1.0
BM813189 weakly similar to GP|17104669|gb| unknown protein {Arab... 30 1.0
AJ388952 similar to PIR|T04526|T045 hypothetical protein F16A16.... 29 1.4
TC79146 similar to GP|9757884|dbj|BAB08471.1 RuvB DNA helicase-l... 29 1.4
BG586379 similar to PIR|T03442|T034 glycine-rich protein - rice,... 29 1.4
AW689795 weakly similar to PIR|T11678|T116 hypothetical protein ... 29 1.4
TC93063 similar to PIR|T08852|T08852 lustrin A - California red ... 29 1.4
TC81335 29 1.8
TC78344 similar to GP|13540405|gb|AAK29456.1 histone H1 {Lens cu... 29 1.8
>TC77464 similar to GP|13272433|gb|AAK17155.1 unknown protein {Arabidopsis
thaliana}, partial (24%)
Length = 1109
Score = 469 bits (1208), Expect = e-133
Identities = 235/235 (100%), Positives = 235/235 (100%)
Frame = +2
Query: 1 MASSENLAASIESWMYRPAMTDTWLSDYISRDAETLTKALHKSLSSSSSPEDALSPFLNL 60
MASSENLAASIESWMYRPAMTDTWLSDYISRDAETLTKALHKSLSSSSSPEDALSPFLNL
Sbjct: 122 MASSENLAASIESWMYRPAMTDTWLSDYISRDAETLTKALHKSLSSSSSPEDALSPFLNL 301
Query: 61 IKTDSATTTTTTTPTVSSLSASDDSAPKRQRVAAGKISKRKSRASKRSQTTFITADPANF 120
IKTDSATTTTTTTPTVSSLSASDDSAPKRQRVAAGKISKRKSRASKRSQTTFITADPANF
Sbjct: 302 IKTDSATTTTTTTPTVSSLSASDDSAPKRQRVAAGKISKRKSRASKRSQTTFITADPANF 481
Query: 121 RQMVQQVTGVRFGSGSNVSMAPLVKPEPHRAVGVNGGGRFTTGGGCLPTLDTSAFLLQHH 180
RQMVQQVTGVRFGSGSNVSMAPLVKPEPHRAVGVNGGGRFTTGGGCLPTLDTSAFLLQHH
Sbjct: 482 RQMVQQVTGVRFGSGSNVSMAPLVKPEPHRAVGVNGGGRFTTGGGCLPTLDTSAFLLQHH 661
Query: 181 QQQQQTMVGPNSDGPEMTGLGPLSFGQPIGEDAAGYDFETFSSCFPTLESSWKVM 235
QQQQQTMVGPNSDGPEMTGLGPLSFGQPIGEDAAGYDFETFSSCFPTLESSWKVM
Sbjct: 662 QQQQQTMVGPNSDGPEMTGLGPLSFGQPIGEDAAGYDFETFSSCFPTLESSWKVM 826
>BQ135897 similar to GP|13272433|gb| unknown protein {Arabidopsis thaliana},
partial (14%)
Length = 145
Score = 66.6 bits (161), Expect = 8e-12
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +3
Query: 95 GKISKRKSRASKRSQTTFITADPANFRQMVQQVTGVR 131
GK KR SRASKR+QTTFITADPANFRQMVQQVTGVR
Sbjct: 30 GKSHKRXSRASKRTQTTFITADPANFRQMVQQVTGVR 140
>TC88120 similar to GP|21593100|gb|AAM65049.1 unknown {Arabidopsis
thaliana}, partial (19%)
Length = 991
Score = 51.2 bits (121), Expect = 3e-07
Identities = 28/61 (45%), Positives = 38/61 (61%)
Frame = +3
Query: 69 TTTTTPTVSSLSASDDSAPKRQRVAAGKISKRKSRASKRSQTTFITADPANFRQMVQQVT 128
T +PT S + SD PK ++ K +R+SRASKR+ TT + A+ NFRQ+VQQ T
Sbjct: 252 TMILSPTNSYTNTSDQLTPKGGNIS--KPIRRRSRASKRTPTTLLNANTTNFRQLVQQFT 425
Query: 129 G 129
G
Sbjct: 426 G 428
>TC84329 similar to PIR|C86480|C86480 hypothetical protein AAG28299.1
[imported] - Arabidopsis thaliana, partial (14%)
Length = 730
Score = 44.3 bits (103), Expect = 4e-05
Identities = 19/36 (52%), Positives = 27/36 (74%)
Frame = +1
Query: 95 GKISKRKSRASKRSQTTFITADPANFRQMVQQVTGV 130
G+ K++SRAS+R+ TT +T D NFR MVQ+ TG+
Sbjct: 577 GRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGI 684
>TC76413 similar to GP|3461820|gb|AAC32914.1| unknown protein {Arabidopsis
thaliana}, partial (54%)
Length = 1310
Score = 38.5 bits (88), Expect = 0.002
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +3
Query: 26 SDYISRDAETLTKALHKSLSSSSS----PEDALSPFLNLIKTDSATTTTTTTPTVSSLSA 81
+ +ISR + L K HK + PE P +N +T + TTTTTT T++ S
Sbjct: 117 NSFISRRKKALKKMAHKITKKEETEFQVPETITPPCINPTQTTTTPTTTTTT-TLTEPSR 293
Query: 82 SDDSAPKRQRVAAGKISKRKSRASKRSQTTFITADPANFRQMVQQVTGVR 131
+ + R A S+++S S + ++ V + +G R
Sbjct: 294 FFEDKSSKARSATSSFSQKRSHPSNDDSNVQPQTTSSEAKRAVNRCSGCR 443
>TC85276 weakly similar to GP|22294973|dbj|BAC08801.
ORF_ID:tlr1249~hypothetical protein {Thermosynechococcus
elongatus BP-1}, partial (33%)
Length = 1315
Score = 32.7 bits (73), Expect = 0.12
Identities = 22/67 (32%), Positives = 38/67 (55%), Gaps = 7/67 (10%)
Frame = -1
Query: 65 SATTTTTTTPTVSSLSASDDSAPKRQRVAAG------KISKRKSRASKRS-QTTFITADP 117
+ TTTTTTT TV++++ +D S+ R++ G +I K ++ S RS + I P
Sbjct: 1009 TTTTTTTTTTTVTTVTTNDTSSRWLVRLSVGIGITVAEIDKSRNSPSFRSAEKVEINFAP 830
Query: 118 ANFRQMV 124
NF +++
Sbjct: 829 TNFVKVI 809
>AW776010 similar to GP|13877535|gb Unknown protein {Arabidopsis thaliana},
partial (42%)
Length = 622
Score = 32.3 bits (72), Expect = 0.16
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 110 TTFITADPANFRQMVQQVTG 129
TTF+ ADP++F+Q+VQ +TG
Sbjct: 194 TTFVQADPSSFKQVVQMLTG 253
>BF632455 similar to GP|10177552|dbj anthocyanin acyltransferase-like protein
{Arabidopsis thaliana}, partial (3%)
Length = 621
Score = 31.6 bits (70), Expect = 0.28
Identities = 22/68 (32%), Positives = 30/68 (43%)
Frame = +3
Query: 47 SSSPEDALSPFLNLIKTDSATTTTTTTPTVSSLSASDDSAPKRQRVAAGKISKRKSRASK 106
SSS +LS L L++ + T TPT+ S S S S R AA + AS
Sbjct: 189 SSSLSSSLSASLPLLRPTPSLLRTAATPTLVSTSPSSPSVVLRLVAAASPATLPTQTASP 368
Query: 107 RSQTTFIT 114
S + +T
Sbjct: 369 ESASALVT 392
>TC87086 similar to SP|Q41001|BCP_PEA Blue copper protein precursor. [Garden
pea] {Pisum sativum}, partial (87%)
Length = 1219
Score = 31.6 bits (70), Expect = 0.28
Identities = 21/54 (38%), Positives = 29/54 (52%), Gaps = 2/54 (3%)
Frame = +1
Query: 36 LTKALHKSLSSSSSPEDALSPFLNLIKTDS--ATTTTTTTPTVSSLSASDDSAP 87
L+ + S S+SS+P SP +D A TTTTTTP+ S S+S +P
Sbjct: 778 LSVKVKASSSASSAPSATPSPSGKGSPSDGTPAATTTTTTPSTQSASSSTSISP 939
>BQ141682 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (8%)
Length = 938
Score = 31.6 bits (70), Expect = 0.28
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 143 LVKPEPHRAVGVNGGGRFTTGGGCLPTLDTSAFLLQHHQQQQQTMVGPNSDGPEM--TGL 200
++ P P R G GGR GGG P T + + ++ VG ++G E+ TG+
Sbjct: 125 IIPPPPLRTGGSGAGGRGRRGGGSPPDGVTQTASELRYDRTKEEEVGKKAEGREIPETGM 304
Query: 201 GP 202
P
Sbjct: 305 EP 310
>BE325044 similar to GP|18087570|gb| AT3g54650/T5N23_10 {Arabidopsis
thaliana}, partial (5%)
Length = 467
Score = 30.4 bits (67), Expect = 0.61
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2
Query: 61 IKTDSATTTTTTTPTVSSLS 80
IKT +TTTTTTTP SSLS
Sbjct: 137 IKTPVSTTTTTTTPVDSSLS 196
>BQ151354 homologue to GP|860970|emb|C HP8 peptide {Homo sapiens}, partial (6%)
Length = 1209
Score = 29.6 bits (65), Expect = 1.0
Identities = 16/54 (29%), Positives = 24/54 (43%)
Frame = +3
Query: 99 KRKSRASKRSQTTFITADPANFRQMVQQVTGVRFGSGSNVSMAPLVKPEPHRAV 152
K +R +R + F P RQ + R +N AP +PEP+RA+
Sbjct: 963 KSPTRDKQRGRAAFAREPPRTRRQNPRAGGAGRRAGAANERRAPWTRPEPNRAI 1124
>BM813189 weakly similar to GP|17104669|gb| unknown protein {Arabidopsis
thaliana}, partial (19%)
Length = 454
Score = 29.6 bits (65), Expect = 1.0
Identities = 18/53 (33%), Positives = 29/53 (53%), Gaps = 2/53 (3%)
Frame = -1
Query: 54 LSPFLNLIKTDSATTTT--TTTPTVSSLSASDDSAPKRQRVAAGKISKRKSRA 104
L+ N +KT SATTTT +T T++S S +S K ++ +R++ A
Sbjct: 409 LTQTTNKLKTTSATTTTRSSTATTLNSDRGSSESREKNRKYQPANAIRRRTMA 251
>AJ388952 similar to PIR|T04526|T045 hypothetical protein F16A16.160 -
Arabidopsis thaliana, partial (24%)
Length = 591
Score = 29.3 bits (64), Expect = 1.4
Identities = 22/77 (28%), Positives = 37/77 (47%)
Frame = +3
Query: 35 TLTKALHKSLSSSSSPEDALSPFLNLIKTDSATTTTTTTPTVSSLSASDDSAPKRQRVAA 94
TL + +K+LSSSSS ++S T +T++P ++ +AS AP R +
Sbjct: 54 TLPRHFNKNLSSSSSSSSSISKIFTFY-----TPISTSSPIIT--NASSRRAPTFPRAMS 212
Query: 95 GKISKRKSRASKRSQTT 111
S S +S S ++
Sbjct: 213 SSSSPSPSSSSSSSSSS 263
>TC79146 similar to GP|9757884|dbj|BAB08471.1 RuvB DNA helicase-like protein
{Arabidopsis thaliana}, partial (47%)
Length = 792
Score = 29.3 bits (64), Expect = 1.4
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 41 HKSLSSSSSPEDALSPFLNLIKTDSATTTTTTTPTVSSLSASDDSAPKRQR 91
H SLS S SP+ + P N + S +T+T+T+P+ L D + Q+
Sbjct: 678 HSSLSPSQSPQSSSPP--NHKPSPSPSTSTSTSPSSPQLQPPPDDQSEPQQ 532
>BG586379 similar to PIR|T03442|T034 glycine-rich protein - rice, partial
(28%)
Length = 701
Score = 29.3 bits (64), Expect = 1.4
Identities = 23/70 (32%), Positives = 34/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 65 SATTTTTTTPTVSSLSASD-DSAPKRQRVAAGKISKRKSRASKRSQTTFITADPANFRQM 123
S TTTTTTT T+S++S + +A + G +R RS + I D A+ + +
Sbjct: 393 STTTTTTTTATISAVSTTTVTAATTASAITTG------ARCRGRSFGSTINFDCASIKFL 232
Query: 124 VQQVTGVRFG 133
V RFG
Sbjct: 231 VI*TLNSRFG 202
>AW689795 weakly similar to PIR|T11678|T116 hypothetical protein
SPBC21D10.06c - fission yeast (Schizosaccharomyces
pombe), partial (3%)
Length = 678
Score = 29.3 bits (64), Expect = 1.4
Identities = 31/110 (28%), Positives = 42/110 (38%)
Frame = +3
Query: 1 MASSENLAASIESWMYRPAMTDTWLSDYISRDAETLTKALHKSLSSSSSPEDALSPFLNL 60
M SS LA S S + PA T S T+ + S SSS+S + SP +L
Sbjct: 21 MFSSSTLATSSSS-ISAPATFST------SMTTSTIAVNVSSSSSSSASVTTSSSPTTSL 179
Query: 61 IKTDSATTTTTTTPTVSSLSASDDSAPKRQRVAAGKISKRKSRASKRSQT 110
K S ++ + VSS + Q G S S SQ+
Sbjct: 180 FKAGSTPLPSSVSLPVSSSGSEPVETKGGQNAGIGIFGFSSSATSANSQS 329
>TC93063 similar to PIR|T08852|T08852 lustrin A - California red abalone,
partial (4%)
Length = 1058
Score = 29.3 bits (64), Expect = 1.4
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 47 SSSPEDALSPFLNLIKTDSATTTTTTTPTVSSLSASDDSAPKRQRVAAGKISKRKSRASK 106
SS+P DA + S+ + + P+ + +ASD A AA K RKS+A++
Sbjct: 1019 SSTPTDATA--------SSSASASPAPPSAGAAAASDPPATLENSAAANKKRPRKSKAAE 864
Query: 107 RSQ 109
+
Sbjct: 863 EEE 855
>TC81335
Length = 686
Score = 28.9 bits (63), Expect = 1.8
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 25 LSDYISRDAETLTKALHKSLSSSSSPEDALSPFLNLIKTDSATTTT-TTTPTVSSLSASD 83
+ D + + T + LHK++ SS + SP L+ SAT T T S+ S
Sbjct: 323 IKDEVGIERLTDNECLHKAVQSSPVSPPSSSPGQMLVNKTSATLDPFHVTKTSSNGSQQT 502
Query: 84 DSAPKRQRVAAGKISKRKSRASKRSQTTFIT 114
D P +A +++ +++ T +T
Sbjct: 503 DKDPSPPFTSASQVTTSSKTEIQKTSTARLT 595
>TC78344 similar to GP|13540405|gb|AAK29456.1 histone H1 {Lens culinaris},
partial (86%)
Length = 1215
Score = 28.9 bits (63), Expect = 1.8
Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 10/145 (6%)
Frame = +2
Query: 33 AETLTKALHKSLSSSSSPEDALSPFLNLIKTDSATTTTTTTPTVSSLSASDDSAP----- 87
A+ KA K+ + + P P A P + A ++ P
Sbjct: 584 AKAKAKAKAKAAPAKAKPAAKAKPAAKAKPAAKAKPVAKAKPKAKAPVAKANAVPVAAKA 763
Query: 88 ----KRQRVAAGKISKRKSRASKRSQTTFITADPANFRQMVQQV-TGVRFGSGSNVSMAP 142
K + A K + R ++AS+ S T A + V++ T V+ + + P
Sbjct: 764 KPAAKAKPAAKAKPAARPAKASRTSTRTSPGKRAAAAKPAVKKAATPVKKAVPAKKAATP 943
Query: 143 LVKPEPHRAVGVNGGGRFTTGGGCL 167
+ K P R GGR GGG +
Sbjct: 944 VKKAAPARKAPAKRGGRK*KGGGVI 1018
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.311 0.125 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,857,682
Number of Sequences: 36976
Number of extensions: 86961
Number of successful extensions: 887
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of query: 235
length of database: 9,014,727
effective HSP length: 93
effective length of query: 142
effective length of database: 5,575,959
effective search space: 791786178
effective search space used: 791786178
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Medicago: description of AC149050.15