TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148971.3 - phase: 0 
         (226 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC88008 similar to GP|22135830|gb|AAM91101.1 At1g09730/F21M12_12...    96  9e-21
TC93087 similar to GP|20160511|dbj|BAB89462. hypothetical protei...    60  9e-10
TC91682                                                                33  0.068
TC80724 weakly similar to GP|20160469|dbj|BAB89422. lysophosphol...    32  0.15
TC79449 weakly similar to GP|14423394|gb|AAK62379.1 Unknown prot...    30  0.57
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba...    29  1.7
BQ152300 homologue to PIR|H84602|H84 40S ribosomal protein S25 [...    28  2.2
BQ144088 homologue to PIR|H84602|H84 40S ribosomal protein S25 [...    28  2.2
TC85790 homologue to PIR|H84602|H84602 40S ribosomal protein S25...    28  2.2
TC79664 weakly similar to GP|12006354|gb|AAG44839.1 putative Hs1...    28  3.7
TC92394 homologue to SP|P15958|NU5C_VICFA NADH-plastoquinone oxi...    28  3.7
TC77456 similar to PIR|T10580|T10580 zinc-finger protein Lsd1 - ...    28  3.7
AJ502664                                                               27  4.9
TC89535 weakly similar to PIR|A96808|A96808 hypothetical protein...    27  4.9
BI272620 similar to SP|Q9LQZ7|COL6_ Zinc finger protein constans...    27  6.4
TC92193 weakly similar to PIR|A96688|A96688 hypothetical protein...    27  8.3
TC81880 similar to PIR|B85431|B85431 trichohyalin like protein [...    27  8.3
TC77805 similar to GP|20127064|gb|AAM10951.1 putative bHLH trans...    27  8.3
BG645497 similar to GP|13507547|gb unknown protein {Arabidopsis ...    27  8.3

>TC88008 similar to GP|22135830|gb|AAM91101.1 At1g09730/F21M12_12
           {Arabidopsis thaliana}, partial (17%)
          Length = 1641

 Score = 96.3 bits (238), Expect = 9e-21
 Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
 Frame = +2

Query: 38  FSLPPFFFFQLPQQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITKFSKFLNSNWFPSDE 97
           FS   F    LPQQ+N YDCGLFLL+++E FL EAP+ FNPFK+TKFS FLN +WF   E
Sbjct: 125 FSNLRFLPLALPQQENSYDCGLFLLHYLELFLAEAPLTFNPFKVTKFSNFLNVDWFLPAE 304

Query: 98  ASLRRSHIQNLIYDIFENGSLKAPPIDCRGKGPLSELPGVIEHK-VEADSSGASCYPGIW 156
           A L+R+ IQ LI ++ EN           G   +S   G  +H+ +E   +G     GI 
Sbjct: 305 AYLKRTLIQRLISELVEN----------HGSREISSSDGSDDHQYIENIENGT----GIE 442

Query: 157 HGNLSNGSTET------DIQFRPVSPVRAASCSRDPGIVFKDL 193
           H   ++ S  +      ++     S         +PG+V KDL
Sbjct: 443 HLEFNSASKPSHAGEGIEMTLLSGSSFLDPQSFNNPGMVLKDL 571


>TC93087 similar to GP|20160511|dbj|BAB89462. hypothetical protein {Oryza
           sativa (japonica cultivar-group)}, partial (5%)
          Length = 668

 Score = 59.7 bits (143), Expect = 9e-10
 Identities = 29/62 (46%), Positives = 38/62 (60%)
 Frame = +2

Query: 48  LPQQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITKFSKFLNSNWFPSDEASLRRSHIQN 107
           +PQQ N YDCGLF+LYF+ERF+ EAP +     +T   +F    WF  +EAS  R  I  
Sbjct: 71  VPQQKNEYDCGLFVLYFIERFIGEAPERLKKKDLTNNQRF-GKRWFKPEEASSLRVKIHK 247

Query: 108 LI 109
           L+
Sbjct: 248 LL 253


>TC91682 
          Length = 1093

 Score = 33.5 bits (75), Expect = 0.068
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = +1

Query: 44  FFFQLPQQDNFYDCGLFLLYFVERFLEE 71
           FFFQ P Q N  DCG    YFV RF++E
Sbjct: 742 FFFQCPMQTNGIDCG----YFVMRFMKE 813


>TC80724 weakly similar to GP|20160469|dbj|BAB89422. lysophospholipase -
           like {Oryza sativa (japonica cultivar-group)}, partial
           (8%)
          Length = 799

 Score = 32.3 bits (72), Expect = 0.15
 Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +3

Query: 29  SVELFIDFCFSLPPFFFFQLPQQDNFYDCGL-FLLYFVERFLEEAPIKFNPFKITKFSKF 87
           +V L  DFCF    F    L    NFY C L F L+ V+R L     +F    + KF K 
Sbjct: 396 TVILSKDFCFFFFSFEGILLIMFRNFYACLLIFKLHSVKRGLW---FRFLVVLVAKFVK- 563

Query: 88  LNSNWFPSDEASLR 101
           L  NW  SDE  L+
Sbjct: 564 LKFNWTQSDERKLK 605


>TC79449 weakly similar to GP|14423394|gb|AAK62379.1 Unknown protein
            {Arabidopsis thaliana}, partial (44%)
          Length = 1486

 Score = 30.4 bits (67), Expect = 0.57
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +2

Query: 48   LPQQDNFYDCGLFLLYFVERFLEEAPIKFN 77
            LP+Q+N +DCG+F++ + + +     + FN
Sbjct: 1391 LPEQENGFDCGVFMIKYADFYSRSLGLCFN 1480


>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
           partial (13%)
          Length = 663

 Score = 28.9 bits (63), Expect = 1.7
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
 Frame = -3

Query: 1   MADDFSSKFLQLRFISLEVSSLQMNLTNSVELFIDFCFSLPPFFFFQLPQQD-NFYDCGL 59
           +   FSS      F+SL    L  +  +S   F+ F FSL    FF  P    + +    
Sbjct: 529 LPSSFSSSSFFFSFLSLFFFFLLPSSPSSSSSFLSFFFSLSFLDFFSSPSLSLSSFPFSF 350

Query: 60  FLLYFVERFLEEAPIKFNPFKITKFSKF 87
           F  +F       +P   +P   + F  F
Sbjct: 349 FSFFFFSLSFFSSPSSSSPLTFSSFFSF 266


>BQ152300 homologue to PIR|H84602|H84 40S ribosomal protein S25 [imported] -
           Arabidopsis thaliana, partial (92%)
          Length = 645

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 15/27 (55%), Positives = 16/27 (58%), Gaps = 1/27 (3%)
 Frame = -3

Query: 27  TNSVELF-IDFCFSLPPFFFFQLPQQD 52
           +NS  LF   FCF L  FFFF LP  D
Sbjct: 118 SNSTMLFTFSFCFPLLHFFFFCLPPPD 38


>BQ144088 homologue to PIR|H84602|H84 40S ribosomal protein S25 [imported] -
           Arabidopsis thaliana, partial (92%)
          Length = 773

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 15/27 (55%), Positives = 16/27 (58%), Gaps = 1/27 (3%)
 Frame = -1

Query: 27  TNSVELF-IDFCFSLPPFFFFQLPQQD 52
           +NS  LF   FCF L  FFFF LP  D
Sbjct: 185 SNSTMLFTFSFCFPLLHFFFFCLPPPD 105


>TC85790 homologue to PIR|H84602|H84602 40S ribosomal protein S25 [imported]
           - Arabidopsis thaliana, partial (92%)
          Length = 695

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 15/27 (55%), Positives = 16/27 (58%), Gaps = 1/27 (3%)
 Frame = -1

Query: 27  TNSVELF-IDFCFSLPPFFFFQLPQQD 52
           +NS  LF   FCF L  FFFF LP  D
Sbjct: 218 SNSTMLFTFSFCFPLLHFFFFCLPPPD 138


>TC79664 weakly similar to GP|12006354|gb|AAG44839.1 putative Hs1pro-1-like
           receptor {Glycine max}, partial (67%)
          Length = 1489

 Score = 27.7 bits (60), Expect = 3.7
 Identities = 25/85 (29%), Positives = 40/85 (46%), Gaps = 5/85 (5%)
 Frame = +1

Query: 43  FFFFQLPQQDNFYDCGLFLLYFVE-----RFLEEAPIKFNPFKITKFSKFLNSNWFPSDE 97
           FF  Q+ Q    Y   LF LY  +       +++A +K++P +ITK   F     FPS  
Sbjct: 19  FFHSQIIQ----YLHTLFSLYLFQDG*FRMEIKDAKLKYSP-QITK--TFFTLTNFPSPS 177

Query: 98  ASLRRSHIQNLIYDIFENGSLKAPP 122
           ++  + H  +LI+ +     L  PP
Sbjct: 178 STYNKRHHNSLIHTLHNI*QLSPPP 252


>TC92394 homologue to SP|P15958|NU5C_VICFA NADH-plastoquinone oxidoreductase
           chain 5  chloroplast (EC 1.6.5.3). [Broad bean] {Vicia
           faba}, partial (22%)
          Length = 646

 Score = 27.7 bits (60), Expect = 3.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 44  FFFQLPQQDNFYDCGLFLLYF 64
           F+F L QQ  F  CGLFL+++
Sbjct: 221 FYFFLRQQKRFAVCGLFLVFY 283


>TC77456 similar to PIR|T10580|T10580 zinc-finger protein Lsd1 -
          Arabidopsis thaliana, partial (90%)
          Length = 1472

 Score = 27.7 bits (60), Expect = 3.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 34 IDFCFSLPPFFFFQLPQQDNF 54
          I F FSL  FFFF  P Q N+
Sbjct: 76 IGFTFSLSLFFFFLFPTQSNY 138


>AJ502664 
          Length = 535

 Score = 27.3 bits (59), Expect = 4.9
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +3

Query: 44  FFFQLPQQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITKFSKF 87
           F F   ++  ++ C LFL+ FVE+F+   PI F+      FSKF
Sbjct: 429 FIFFFKRKYYYFLCSLFLVSFVEKFV---PIYFS------FSKF 533


>TC89535 weakly similar to PIR|A96808|A96808 hypothetical protein T32E8.13
           [imported] - Arabidopsis thaliana, partial (9%)
          Length = 1729

 Score = 27.3 bits (59), Expect = 4.9
 Identities = 20/63 (31%), Positives = 29/63 (45%)
 Frame = -2

Query: 15  ISLEVSSLQMNLTNSVELFIDFCFSLPPFFFFQLPQQDNFYDCGLFLLYFVERFLEEAPI 74
           IS +  SL+ +  ++  L   F F+L  FFFF  P    F     FLL         +P+
Sbjct: 681 ISFKFKSLKYSSVSTQTLKPRFSFALDDFFFFLSPPPPEFNFF*RFLL---------SPL 529

Query: 75  KFN 77
           +FN
Sbjct: 528 RFN 520


>BI272620 similar to SP|Q9LQZ7|COL6_ Zinc finger protein constans-like 6.
           [Mouse-ear cress] {Arabidopsis thaliana}, partial (15%)
          Length = 707

 Score = 26.9 bits (58), Expect = 6.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 186 PGIVFKDLQAAVVPPHFDCRQMSLCHQSGF 215
           PG  F+DL  A  PP+  C++    H S F
Sbjct: 486 PGYCFEDLLDASFPPNGFCKKQKQNHYSAF 575


>TC92193 weakly similar to PIR|A96688|A96688 hypothetical protein T27F4.4
           [imported] - Arabidopsis thaliana, partial (9%)
          Length = 595

 Score = 26.6 bits (57), Expect = 8.3
 Identities = 13/31 (41%), Positives = 20/31 (63%), Gaps = 1/31 (3%)
 Frame = -2

Query: 15  ISLEVSSLQMNL-TNSVELFIDFCFSLPPFF 44
           ++L VS L +N+ T S+ + +D C SLP  F
Sbjct: 255 LTLSVSILDLNI*TPSLSMRVDLCISLPTRF 163


>TC81880 similar to PIR|B85431|B85431 trichohyalin like protein [imported] -
           Arabidopsis thaliana, partial (4%)
          Length = 1043

 Score = 26.6 bits (57), Expect = 8.3
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
 Frame = -2

Query: 21  SLQMNLTNSVELFIDFCFSLPPF-----FFFQLPQQDNFYDCGLFLLYFV 65
           SLQ    NS  +F+ F FSL  F     FFFQL    +FY    FLL+ +
Sbjct: 565 SLQHCSVNSHSIFLSFPFSLQLFYLSETFFFQL----SFY----FLLFII 440


>TC77805 similar to GP|20127064|gb|AAM10951.1 putative bHLH transcription
            factor {Arabidopsis thaliana}, partial (30%)
          Length = 2068

 Score = 26.6 bits (57), Expect = 8.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 151  CYPGIWHGNLSNGSTE 166
            C P +WH   SNGSTE
Sbjct: 1588 CMPILWHKEESNGSTE 1541


>BG645497 similar to GP|13507547|gb unknown protein {Arabidopsis thaliana},
           partial (18%)
          Length = 765

 Score = 26.6 bits (57), Expect = 8.3
 Identities = 13/45 (28%), Positives = 26/45 (56%)
 Frame = +1

Query: 64  FVERFLEEAPIKFNPFKITKFSKFLNSNWFPSDEASLRRSHIQNL 108
           F+  +   A   ++  K+TKF + +N N+F S   +L  S++++L
Sbjct: 70  FIYTY*NAALTNYSGRKLTKFGR*INLNFFISFAVTLHDSNVRDL 204


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.324    0.141    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,146,205
Number of Sequences: 36976
Number of extensions: 127999
Number of successful extensions: 937
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of query: 226
length of database: 9,014,727
effective HSP length: 93
effective length of query: 133
effective length of database: 5,575,959
effective search space: 741602547
effective search space used: 741602547
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 56 (26.2 bits)