BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148918.4 - phase: 0
(468 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88547 similar to PIR|F96592|F96592 probable zinc finger protei... 375 e-104
TC78882 homologue to GP|8843731|dbj|BAA97279.1 zinc finger prote... 343 6e-95
TC84551 homologue to GP|14597044|emb|CAC43563. unnamed protein p... 327 5e-90
TC88531 homologue to GP|14597044|emb|CAC43563. unnamed protein p... 325 2e-89
TC87148 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No de... 313 1e-85
BG584080 similar to GP|4204303|gb| lcl|prt_seq No definition lin... 291 4e-79
TC83115 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No de... 252 2e-67
BM814721 homologue to GP|14597044|em unnamed protein product {Ar... 213 1e-55
TC84340 homologue to PIR|F96704|F96704 hypothetical protein T23K... 158 6e-48
TC81124 homologue to GP|14597044|emb|CAC43563. unnamed protein p... 168 4e-42
TC78261 homologue to PIR|A86468|A86468 probable zinc finger prot... 87 2e-17
TC82819 homologue to PIR|T06753|T06753 zinc finger protein F15B8... 84 9e-17
TC78883 similar to GP|8843731|dbj|BAA97279.1 zinc finger protein... 48 8e-11
TC90105 weakly similar to GP|10241636|emb|CAC09475. putative zin... 57 2e-08
TC78817 similar to GP|14597044|emb|CAC43563. unnamed protein pro... 53 3e-07
BF635284 52 4e-07
TC89882 similar to PIR|A86468|A86468 probable zinc finger protei... 50 2e-06
CA921028 similar to GP|14335046|gb| AT5g44160/MLN1_8 {Arabidopsi... 45 8e-05
BI309749 similar to GP|13605633|gb| AT3g13810/MCP4_2 {Arabidopsi... 41 0.001
TC78068 similar to GP|21595553|gb|AAM66112.1 putative coated ves... 36 0.028
>TC88547 similar to PIR|F96592|F96592 probable zinc finger protein
[imported] - Arabidopsis thaliana, partial (43%)
Length = 1765
Score = 375 bits (963), Expect = e-104
Identities = 221/435 (50%), Positives = 273/435 (61%), Gaps = 27/435 (6%)
Frame = +2
Query: 1 MSNLTSASGEASANSSGNRTHEVDAKFSQQYFASSQTQTHDETPAKKRRNLPGNPDPQAE 60
MSNLTSAS E SA+S+ + + T+ E K++RNLPG+PDP+A+
Sbjct: 530 MSNLTSASSEISASSATK---------------NGKASTNLEPQTKRKRNLPGHPDPEAQ 664
Query: 61 VIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEI-RKKVYVCP 119
V+ALSP+TL+ATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLK+R NEI RKKVYVCP
Sbjct: 665 VLALSPQTLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKKRNVNEIIRKKVYVCP 844
Query: 120 EPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYR 179
EPTCVHHDPSRALGDLTGIKKHF RKHGEKKWKC+KCSK+YAVQSDWKAHSK CGT+EY+
Sbjct: 845 EPTCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTKEYK 1024
Query: 180 CDCGTLFSRRDSFITHRAFCDALAEESSRTVIPQPTQPNSHHNMNNLQTQDIQGFTLKKE 239
CDCGTLFSRRDSFITHRAFCD L++ES+ P +SH + Q+ Q +LKKE
Sbjct: 1025CDCGTLFSRRDSFITHRAFCDVLSQESASISAVNPLF-SSHSQFH--QSHGFQPLSLKKE 1195
Query: 240 HQSFNMLRPEQEVQIPSWLCQSSIDLSSNYSSLDQDLHLYENPNPRNGPTSTLPSYQPSS 299
Q FN LRPE IP WL L L+ ++NPN PT+ P+ +S
Sbjct: 1196-QDFN-LRPE----IPLWL-------------LPTHLNHFQNPN----PTTLFPNNSFNS 1306
Query: 300 ----AASPHMSATALLQKAAQMGATSSCSSQ---------SMMSGTHQQGHVSIVDSATN 346
ASPHMSATALLQKA+Q+G T+ ++ + SG I + +
Sbjct: 1307NNITTASPHMSATALLQKASQIGVTTVSKTEPCRPHLMQTHVPSGMVMPSREEIGTTGFS 1486
Query: 347 NMINSNGNFSLNLSSC--------EDQMINNSFSSSGFHGTSFEDTFAGNILHSNQDHN- 397
+ + S GN + S C D M + S S F + + G + + +D+N
Sbjct: 1487HCLASYGNKAAITSDCFEESSSLLHDVMYGSESSHSQFEAVTAAMSMRG-MFDTQRDNNN 1663
Query: 398 ----INHDGDNDIPK 408
+H G ++I K
Sbjct: 1664FXEQYSHFGKSNIIK 1708
>TC78882 homologue to GP|8843731|dbj|BAA97279.1 zinc finger protein
{Arabidopsis thaliana}, partial (35%)
Length = 983
Score = 343 bits (881), Expect = 6e-95
Identities = 160/226 (70%), Positives = 185/226 (81%)
Frame = +3
Query: 1 MSNLTSASGEASANSSGNRTHEVDAKFSQQYFASSQTQTHDETPAKKRRNLPGNPDPQAE 60
+ N+++ASGEAS +SSGN + Q+ P KK+RNLPG PDP+AE
Sbjct: 165 LDNVSTASGEASISSSGN----------------NNIQSPIPKPTKKKRNLPGMPDPEAE 296
Query: 61 VIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRKKVYVCPE 120
VIALSP TL+ATNRF+CEICNKGFQRDQNLQLH+RGHNLPWKL+QR+S EIRK+VYVCPE
Sbjct: 297 VIALSPTTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPE 476
Query: 121 PTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRC 180
PTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKC+KCSKKYAVQSDWKAHSK CG+REY+C
Sbjct: 477 PTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKC 656
Query: 181 DCGTLFSRRDSFITHRAFCDALAEESSRTVIPQPTQPNSHHNMNNL 226
DCGT+FSRRDSFITHRAFCDALAEE++++ + NS + L
Sbjct: 657 DCGTVFSRRDSFITHRAFCDALAEENAKSQNQAVGKANSESDSKGL 794
>TC84551 homologue to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (27%)
Length = 1133
Score = 327 bits (839), Expect = 5e-90
Identities = 155/205 (75%), Positives = 169/205 (81%)
Frame = +2
Query: 2 SNLTSASGEASANSSGNRTHEVDAKFSQQYFASSQTQTHDETPAKKRRNLPGNPDPQAEV 61
S+ TS G N S H + + SS T P KKRRN PG P+P AEV
Sbjct: 83 SSSTSFFGIREENQSQITHHHPHPQSTTTSATSSAPST--TVPQKKRRNQPGTPNPDAEV 256
Query: 62 IALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRKKVYVCPEP 121
IALSPKTLMATNRFICE+CNKGFQR+QNLQLH+RGHNLPWKLKQ+++ E R+KVY+CPEP
Sbjct: 257 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEPRRKVYLCPEP 436
Query: 122 TCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCD 181
TCVHHDPSRALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSKTCGTREYRCD
Sbjct: 437 TCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCD 616
Query: 182 CGTLFSRRDSFITHRAFCDALAEES 206
CGTLFSRRDSFITHRAFCDALA+ES
Sbjct: 617 CGTLFSRRDSFITHRAFCDALAQES 691
>TC88531 homologue to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (27%)
Length = 898
Score = 325 bits (833), Expect = 2e-89
Identities = 148/190 (77%), Positives = 167/190 (87%), Gaps = 3/190 (1%)
Frame = +1
Query: 22 EVDAKFSQQYFAS---SQTQTHDETPAKKRRNLPGNPDPQAEVIALSPKTLMATNRFICE 78
E ++ +QQ+ +S S T P KKRRN PG P+P AEVIALSPKTLMATNRF+CE
Sbjct: 169 ENQSQITQQHQSSTDASSTAAQPLVPQKKRRNQPGTPNPDAEVIALSPKTLMATNRFVCE 348
Query: 79 ICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRKKVYVCPEPTCVHHDPSRALGDLTGI 138
+C KGFQR+QNLQLH+RGHNLPWKLKQ+++ E ++KVY+CPEPTCVHHDPSRALGDLTGI
Sbjct: 349 VCQKGFQREQNLQLHRRGHNLPWKLKQKSNKEPKRKVYLCPEPTCVHHDPSRALGDLTGI 528
Query: 139 KKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 198
KKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF
Sbjct: 529 KKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 708
Query: 199 CDALAEESSR 208
CDALA E++R
Sbjct: 709 CDALAHENAR 738
>TC87148 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No definition
line found {Arabidopsis thaliana}, partial (29%)
Length = 845
Score = 313 bits (801), Expect = 1e-85
Identities = 149/211 (70%), Positives = 170/211 (79%), Gaps = 17/211 (8%)
Frame = +3
Query: 1 MSNLTSA-SGEASANSSGN------RTHEVDAKFSQQYFASSQTQTHD----------ET 43
MSN+TS SG S ++ +T ++ +F + +S T ++ +
Sbjct: 213 MSNITSCDSGSFSTENTREDAVKQQQTDQILGQFHSPHSHTSTTTNNNNNSNGSNTDLQP 392
Query: 44 PAKKRRNLPGNPDPQAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKL 103
P KK+RNLPGNPDP AEVIALSP TLMATNRF+CEICNKGFQRDQNLQLH+RGHNLPWKL
Sbjct: 393 PLKKKRNLPGNPDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 572
Query: 104 KQRTSNEIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQ 163
KQRTS EIRK+VYVCPEP+CVHH+P+RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQ
Sbjct: 573 KQRTSAEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQ 752
Query: 164 SDWKAHSKTCGTREYRCDCGTLFSRRDSFIT 194
SDWKAHSK CGTREY+CDCGT+FSRRDSFIT
Sbjct: 753 SDWKAHSKICGTREYKCDCGTIFSRRDSFIT 845
>BG584080 similar to GP|4204303|gb| lcl|prt_seq No definition line found
{Arabidopsis thaliana}, partial (28%)
Length = 771
Score = 291 bits (745), Expect = 4e-79
Identities = 134/194 (69%), Positives = 156/194 (80%), Gaps = 10/194 (5%)
Frame = +3
Query: 4 LTSASGEASANSSGNRTHEVDAKFSQQYF----------ASSQTQTHDETPAKKRRNLPG 53
+++ SG+ + SSGN EV + Q A + + ++ KK+RNLPG
Sbjct: 189 MSNISGDEGSFSSGNNGEEVSKQQEVQNNLNDSSSGPSGACNSNGSTNQQQNKKKRNLPG 368
Query: 54 NPDPQAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRK 113
PDP AEV+ALSP TLMATNRF+CEICNKGFQRDQNLQLH+RGHNLPWKL+QRTS E++K
Sbjct: 369 TPDPTAEVVALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSAEVKK 548
Query: 114 KVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTC 173
KVYVCPEP+CVHH+PSRALGDLTGIKKHF RKHGEKKWKCDKCSK+YAVQSDWKAH KTC
Sbjct: 549 KVYVCPEPSCVHHNPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTC 728
Query: 174 GTREYRCDCGTLFS 187
GTREY+CDCGT+FS
Sbjct: 729 GTREYKCDCGTIFS 770
>TC83115 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No definition
line found {Arabidopsis thaliana}, partial (25%)
Length = 519
Score = 252 bits (644), Expect = 2e-67
Identities = 112/148 (75%), Positives = 128/148 (85%), Gaps = 2/148 (1%)
Frame = +2
Query: 24 DAKFSQQYFASSQTQTHDETPA--KKRRNLPGNPDPQAEVIALSPKTLMATNRFICEICN 81
+ + + F + T + P K+++NLPGNPDP+AEVIALSPKTLMATNRF+CE C
Sbjct: 74 EVEITNANFPQNPTMSASNNPPALKRKKNLPGNPDPEAEVIALSPKTLMATNRFLCETCG 253
Query: 82 KGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRKKVYVCPEPTCVHHDPSRALGDLTGIKKH 141
KGFQRDQNLQLH+RGHNLPWKLKQRT+ EI+K+VYVCPE TCVHHDPSRALGDLTGIKKH
Sbjct: 254 KGFQRDQNLQLHRRGHNLPWKLKQRTNKEIKKRVYVCPEKTCVHHDPSRALGDLTGIKKH 433
Query: 142 FCRKHGEKKWKCDKCSKKYAVQSDWKAH 169
FCRKHGEKKWKC+KCSK+YAVQSDWKAH
Sbjct: 434 FCRKHGEKKWKCEKCSKRYAVQSDWKAH 517
>BM814721 homologue to GP|14597044|em unnamed protein product {Arabidopsis
thaliana}, partial (17%)
Length = 771
Score = 213 bits (542), Expect = 1e-55
Identities = 124/251 (49%), Positives = 147/251 (58%), Gaps = 51/251 (20%)
Frame = +1
Query: 114 KVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTC 173
+VY+CPEPTCVHHDPSRALGDLTGIKKH+ RKHGEKKWKC+KCSKKYAVQSDWKAHSKTC
Sbjct: 1 RVYLCPEPTCVHHDPSRALGDLTGIKKHYFRKHGEKKWKCEKCSKKYAVQSDWKAHSKTC 180
Query: 174 GTREYRCDCGTLFSRRDSFITHRAFCDALAEESSR------------------------- 208
GT+EYRCDCGTLFSRRDSFITHRAFCDALA+ESSR
Sbjct: 181 GTKEYRCDCGTLFSRRDSFITHRAFCDALAQESSRQPHPNLITNTSINNSQLFRNISNNN 360
Query: 209 -------TVIPQPTQPNSHHNMNNLQTQDIQGFTLKKEHQSFNMLR--PEQEVQIPSW-- 257
+ IPQ + H +N QT +I F + Q N+L P+Q +Q P +
Sbjct: 361 NNMSLALSQIPQQHISSIHGQNDNNQTSEILRFGNARTAQFNNILSPPPQQTLQTPPFNF 540
Query: 258 -------------LCQSSIDLSS-NYSSLDQDLHLYENPNPRNGPTSTLPSY-QPSSAAS 302
Q I LS N +++ + E N S + + ++ S
Sbjct: 541 ITQQNQNYHHDQSQFQGLISLSELNNNNMFSENFNNEGSNDFFSENSIMFDHNNQTNPIS 720
Query: 303 PHMSATALLQK 313
PHMSATALLQK
Sbjct: 721 PHMSATALLQK 753
>TC84340 homologue to PIR|F96704|F96704 hypothetical protein T23K23.2
[imported] - Arabidopsis thaliana, partial (33%)
Length = 692
Score = 158 bits (399), Expect(2) = 6e-48
Identities = 66/101 (65%), Positives = 85/101 (83%)
Frame = +1
Query: 46 KKRRNLPGNPDPQAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQ 105
K++R G PDP AEV++LSPKTL+ ++R++CEICN+GFQRDQNLQ+H+R H +PWKL +
Sbjct: 262 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 441
Query: 106 RTSNEIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKH 146
R + +RK+V+VCPEPTC+HHDP ALGDL GIKKHF RKH
Sbjct: 442 RETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKH 564
Score = 51.2 bits (121), Expect(2) = 6e-48
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2
Query: 149 KKWKCDKCSKKYAVQSDWKAHSKTCGT 175
K+W C++CSK YAVQSD+KAH KTCGT
Sbjct: 575 KQWVCERCSKGYAVQSDYKAHLKTCGT 655
>TC81124 homologue to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (21%)
Length = 1609
Score = 168 bits (426), Expect = 4e-42
Identities = 103/269 (38%), Positives = 135/269 (49%), Gaps = 2/269 (0%)
Frame = +1
Query: 133 GDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSF 192
GDLTGIKKH+ RKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSF
Sbjct: 1 GDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSF 180
Query: 193 ITHRAFCDALAEESSRTVIPQPTQPNSHHNMNNLQTQDIQGFTLKKEHQSFNMLRPEQEV 252
ITHRAFCDALA+E R T H + + G ++ + ++ +
Sbjct: 181 ITHRAFCDALAQEGPRQPPISLTGAIGSHLYGSSSNNNTMGLSIAQVAAQMPNMQQQDHH 360
Query: 253 QIPSWLCQSSIDLSSNYSSLDQDLHLYENPNPRNGPTSTLPSYQPSSAASPHMSATALLQ 312
S + ++ S D H+ R ++P+ PH
Sbjct: 361 SSNSATEILRLGAAAANRSGQFDHHMLPQATFRPNSFFNNNIHEPNQNFVPH-------D 519
Query: 313 KAAQMGATSSCSSQSMMSGTHQQGHVSIVDSATNNMINSNGNFSLNLSSCEDQMINNSFS 372
+ Q G MM +H + ++ + N ++SN S N S E + N +
Sbjct: 520 PSQQQGL--------MMQNSHNSNNSNLFNMP--NFLSSNSTNSSNNSFSEHLNVKNEGT 669
Query: 373 S--SGFHGTSFEDTFAGNILHSNQDHNIN 399
+ +G GTS + N+ + NIN
Sbjct: 670 NFFNGSGGTSSAPSLFSNVFSQGGNSNIN 756
Score = 47.4 bits (111), Expect = 1e-05
Identities = 64/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Frame = +1
Query: 210 VIPQPT-QPNSHHNMN------NLQTQDI---QGFTLKKEHQSFNMLRPEQEVQIPSWLC 259
++PQ T +PNS N N N D QG ++ H S N +P++L
Sbjct: 436 MLPQATFRPNSFFNNNIHEPNQNFVPHDPSQQQGLMMQNSHNSNN----SNLFNMPNFLS 603
Query: 260 QSSIDLSSNYSSLDQDLHLY-ENPNPRNGP--TSTLPSY--------------QPSSAAS 302
+S + S+N S + L++ E N NG TS+ PS + A
Sbjct: 604 SNSTNSSNN--SFSEHLNVKNEGTNFFNGSGGTSSAPSLFSNVFSQGGNSNINAAAGTAI 777
Query: 303 PHMSATALLQKAAQMGATSSCSSQSMMSGTHQQGHVSIVDSATNNMINSNGNFSLNLSSC 362
MSATALLQKAAQMGATSS + + + S++ S NN SN S
Sbjct: 778 SSMSATALLQKAAQMGATSSNGNGTTAT--------SLLKSFGNNTGASNSTSSGGGDHS 933
Query: 363 EDQMINNSFSSSGFHGTSFEDTFAGNILHS 392
QM S + GF G + E + ++++S
Sbjct: 934 RVQMGGGS-GNYGFGGGNHEQSNLQDLMNS 1020
>TC78261 homologue to PIR|A86468|A86468 probable zinc finger protein
58191-56692 [imported] - Arabidopsis thaliana, partial
(29%)
Length = 975
Score = 86.7 bits (213), Expect = 2e-17
Identities = 47/128 (36%), Positives = 66/128 (50%), Gaps = 12/128 (9%)
Frame = +1
Query: 82 KGFQRDQNLQLHKRGHNLPWKL--------KQRTSNEIRKKVYVCPEPTCVH---HDPSR 130
KGF+RD NL++H RGH +K K+ S K Y CP C H +
Sbjct: 4 KGFKRDANLRMHMRGHGDEYKTPAALAKPHKETGSEPKLIKRYSCPYGGCKRNKDHKKFQ 183
Query: 131 ALGDLTGIKKHFCRKHGEKKWKCDKC-SKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 189
L + +K H+ R H +K + C +C +KK++V +D K H K CG ++ C CGT FSR+
Sbjct: 184 PLKTILCVKNHYKRTHCDKSYTCSRCHTKKFSVMADLKTHEKHCGKDKWLCSCGTTFSRK 363
Query: 190 DSFITHRA 197
D H A
Sbjct: 364 DKLFGHIA 387
>TC82819 homologue to PIR|T06753|T06753 zinc finger protein F15B8.140 -
Arabidopsis thaliana, partial (50%)
Length = 1064
Score = 84.3 bits (207), Expect = 9e-17
Identities = 45/135 (33%), Positives = 65/135 (47%), Gaps = 8/135 (5%)
Frame = +1
Query: 69 LMATNRFICEICNKGFQRDQNLQLHKRGHNL-----PWKLKQRTSNEIRKKVYVCPEPTC 123
L+ +F C +C K F R N+Q+H GH P L+ + + C P C
Sbjct: 436 LIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGC 615
Query: 124 ---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRC 180
+ H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H K CG Y C
Sbjct: 616 KNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWY-C 792
Query: 181 DCGTLFSRRDSFITH 195
CG+ F + S H
Sbjct: 793 CCGSDFKHKRSLKDH 837
>TC78883 similar to GP|8843731|dbj|BAA97279.1 zinc finger protein
{Arabidopsis thaliana}, partial (28%)
Length = 1674
Score = 47.8 bits (112), Expect(2) = 8e-11
Identities = 38/145 (26%), Positives = 64/145 (43%), Gaps = 2/145 (1%)
Frame = +3
Query: 185 LFSRRDSFITHRAFCDALAEESSRTVIPQPTQPNSHHNMNNLQTQDIQGFTLKKEHQSFN 244
+FSRRDSFITHRAFCDALAEE++++ + NS + L + +
Sbjct: 48 VFSRRDSFITHRAFCDALAEENAKSQNQAVGKANSESDSKVLTGDSLPAVITTTAAAA-- 221
Query: 245 MLRPEQEVQIPSWLCQSSIDLSSNYSSL--DQDLHLYENPNPRNGPTSTLPSYQPSSAAS 302
P+ + S L +DL N + + + + + N S+ S + + A+
Sbjct: 222 ATTPQSNSGVSSALETQKLDLPENPPQIIEEPQVVVTTTASALNASCSSSTSSKSNGCAA 401
Query: 303 PHMSATALLQKAAQMGATSSCSSQS 327
A L ++ A++S Q+
Sbjct: 402 TSTGVFASLFASSTASASASLQPQA 476
Score = 37.4 bits (85), Expect = 0.012
Identities = 27/68 (39%), Positives = 37/68 (53%)
Frame = +3
Query: 258 LCQSSIDLSSNYSSLDQDLHLYENPNPRNGPTSTLPSYQPSSAASPHMSATALLQKAAQM 317
LC S+ SS + + Q+ Y +P++QP P MSATALLQKAAQM
Sbjct: 567 LCLSTSHGSSIFGTGGQECRQY------------VPTHQP-----PAMSATALLQKAAQM 695
Query: 318 GATSSCSS 325
GA ++ +S
Sbjct: 696 GAAATNAS 719
Score = 36.6 bits (83), Expect(2) = 8e-11
Identities = 13/17 (76%), Positives = 15/17 (87%)
Frame = +2
Query: 170 SKTCGTREYRCDCGTLF 186
SK CG+REY+CDCGT F
Sbjct: 2 SKVCGSREYKCDCGTRF 52
>TC90105 weakly similar to GP|10241636|emb|CAC09475. putative zinc finger
protein {Oryza sativa}, partial (21%)
Length = 653
Score = 57.0 bits (136), Expect = 2e-08
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Frame = +3
Query: 56 DPQAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEI---- 111
D E++ L L+A + CEIC KGF+RD NL++H R H +K + + +
Sbjct: 357 DSDCEIVELDAMELLAEHLHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLNMVR 536
Query: 112 RKKVYVCPEPTC---VHHDPSRALGDLTGIKKHFCRKH 146
R + CP C H +AL + +K HF H
Sbjct: 537 RPTQFSCPFEGCNRNKKHKKFKALKSVICVKTHFKXSH 650
>TC78817 similar to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (4%)
Length = 1030
Score = 52.8 bits (125), Expect = 3e-07
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Frame = +3
Query: 265 LSSNYSSLDQDLHLYENPNPRNGPTSTLPSYQPSSAASPHMSATALLQKAAQMGATSSCS 324
LSS+ SS L L N N N S S+A SPHMSATALLQKAAQMGAT S +
Sbjct: 3 LSSSTSS--PSLQLSSN-NSLNNILEENGSLHLSAATSPHMSATALLQKAAQMGATVSNN 173
Query: 325 SQSMMSGTHQQGHVSIVDSATNNMINSNGNFSLN-LSSCEDQMINNSFSSSGF-----HG 378
+ +M+ +++ ++ G+ +N + Q NN+F+++G G
Sbjct: 174 NAGIMTDKTTVA-TNMMAPPQFGLVQQQGHAFMNHYMQQQQQHYNNNFNANGIINGGGVG 350
Query: 379 TSFEDTF----------AGNILHSNQDHNINHDGDNDIPKTTTNDDDV-----AAGGNNA 423
+ D F + I +NQ +IN ++N ++V + GG +
Sbjct: 351 MNGVDMFNAILDQSKALSKIIEQNNQTQSINSVVGGGGGGASSNSNNVMNISGSKGGGDV 530
Query: 424 FTRDFLGL 431
T D LG+
Sbjct: 531 MTLDLLGI 554
>BF635284
Length = 197
Score = 52.4 bits (124), Expect = 4e-07
Identities = 26/41 (63%), Positives = 32/41 (77%), Gaps = 1/41 (2%)
Frame = +3
Query: 428 FLGLKPLSDSDILTIAGMGSCMNPSNSNHQENHSQKP-WEG 467
FLGL+PLS SDIL+IAG+G+CM N Q+N SQKP W+G
Sbjct: 3 FLGLRPLSHSDILSIAGIGNCM---NDQQQQNQSQKPSWQG 116
>TC89882 similar to PIR|A86468|A86468 probable zinc finger protein
58191-56692 [imported] - Arabidopsis thaliana, partial
(9%)
Length = 513
Score = 49.7 bits (117), Expect = 2e-06
Identities = 20/48 (41%), Positives = 31/48 (63%), Gaps = 1/48 (2%)
Frame = +2
Query: 151 WKCDKCSKK-YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRA 197
+ C+ C KK Y++ SD K+H + CG +++C CG+ FSR+D H A
Sbjct: 2 YSCNLCRKKNYSMLSDLKSHMRQCGESKWKCSCGSTFSRKDKLFGHVA 145
>CA921028 similar to GP|14335046|gb| AT5g44160/MLN1_8 {Arabidopsis thaliana},
partial (12%)
Length = 658
Score = 44.7 bits (104), Expect = 8e-05
Identities = 46/138 (33%), Positives = 61/138 (43%)
Frame = -2
Query: 294 SYQPSSAASPHMSATALLQKAAQMGATSSCSSQSMMSGTHQQGHVSIVDSATNNMINSNG 353
S+Q SSA +MSATALLQKAAQ+G+TS+ +S + S G
Sbjct: 420 SHQTSSA---NMSATALLQKAAQIGSTSTDTS----------------------FLGSLG 316
Query: 354 NFSLNLSSCEDQMINNSFSSSGFHGTSFEDTFAGNILHSNQDHNINHDGDNDIPKTTTND 413
N +S D N F +G +GTS + L + +DHN D P +
Sbjct: 315 LKCSNNNSTNDV---NKFGGTGMYGTSSSLLIS---LGNEEDHNNACDFSQMHPSKRRHV 154
Query: 414 DDVAAGGNNAFTRDFLGL 431
GG TRDFLG+
Sbjct: 153 QGEENGGGGQ-TRDFLGV 103
>BI309749 similar to GP|13605633|gb| AT3g13810/MCP4_2 {Arabidopsis thaliana},
partial (5%)
Length = 477
Score = 40.8 bits (94), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (78%)
Frame = +2
Query: 296 QPSSAASPHMSATALLQKAAQMGATSSCSSQSMM 329
Q + +SPHMSATALLQKAAQ+G+T++ + + M
Sbjct: 254 QENMLSSPHMSATALLQKAAQIGSTTTTINNNTM 355
>TC78068 similar to GP|21595553|gb|AAM66112.1 putative coated vesicle
membrane protein {Arabidopsis thaliana}, partial (97%)
Length = 958
Score = 36.2 bits (82), Expect = 0.028
Identities = 15/49 (30%), Positives = 28/49 (56%)
Frame = -1
Query: 240 HQSFNMLRPEQEVQIPSWLCQSSIDLSSNYSSLDQDLHLYENPNPRNGP 288
++++ +L EQ++QI W C +++ + L QDLHL+ + N P
Sbjct: 433 NRTYELLVCEQQIQIYHWSCHENLEFVHQPAPLPQDLHLHHHNAKENQP 287
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.126 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,120,013
Number of Sequences: 36976
Number of extensions: 286608
Number of successful extensions: 1437
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of query: 468
length of database: 9,014,727
effective HSP length: 100
effective length of query: 368
effective length of database: 5,317,127
effective search space: 1956702736
effective search space used: 1956702736
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC148918.4