TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148775.2 + phase: 0 /pseudo
         (267 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imp...    34  0.051
TC79044 homologue to GP|13561063|emb|CAA65500. protein kinase {M...    30  0.97
TC77321 homologue to GP|440824|gb|AAA61608.1|| ribosomal protein...    28  2.8
TC77320 homologue to GP|440824|gb|AAA61608.1|| ribosomal protein...    28  2.8
TC86986 GP|440824|gb|AAA61608.1|| ribosomal protein S15 {Arabido...    28  2.8
TC86130 similar to PIR|T51666|T51666 myb-related transcription f...    28  3.7
TC88042 similar to GP|23297181|gb|AAN12515.1 phosphoenolpyruvate...    27  8.2

>TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imported] -
           Arabidopsis thaliana, partial (6%)
          Length = 951

 Score = 34.3 bits (77), Expect = 0.051
 Identities = 21/80 (26%), Positives = 38/80 (47%)
 Frame = +1

Query: 182 KGEFDYVSDHLLFEGKFSQEFIDRCEYGGVMIVRSLCGVEL*SWSATVYLYGSSYWWKLQ 241
           KG   Y   ++ FEG+FS E++  CEY   ++       +L S   T+++   +Y  K  
Sbjct: 613 KGCTCYFLGYVWFEGEFS*EWLGLCEYRSFLVK*GGFCFKLESGQGTIFVLRYAYRGKFS 792

Query: 242 SLVLMVPFPRQHS*KIIWLK 261
           +L  +  +   H   + WL+
Sbjct: 793 ALEFLGTYCESHKS*VDWLE 852


>TC79044 homologue to GP|13561063|emb|CAA65500. protein kinase {Medicago
            sativa}, partial (67%)
          Length = 1408

 Score = 30.0 bits (66), Expect = 0.97
 Identities = 14/38 (36%), Positives = 20/38 (51%)
 Frame = +3

Query: 195  EGKFSQEFIDRCEYGGVMIVRSLCGVEL*SWSATVYLY 232
            EGK  ++ +    Y    ++R  CG E+  WSA V LY
Sbjct: 1023 EGKVYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVILY 1136


>TC77321 homologue to GP|440824|gb|AAA61608.1|| ribosomal protein S15
           {Arabidopsis thaliana}, complete
          Length = 699

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 20/48 (41%), Positives = 24/48 (49%), Gaps = 1/48 (2%)
 Frame = +3

Query: 181 YKGEFDYVSDHLLFEGKFSQEFIDRCEYGGVMIVRSLCGV-EL*SWSA 227
           Y GEF+YV DH    GK   E   R    GV+  R   GV E+  W+A
Sbjct: 207 YIGEFEYVDDHR--SGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTA 344


>TC77320 homologue to GP|440824|gb|AAA61608.1|| ribosomal protein S15
           {Arabidopsis thaliana}, complete
          Length = 649

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 20/48 (41%), Positives = 24/48 (49%), Gaps = 1/48 (2%)
 Frame = +1

Query: 181 YKGEFDYVSDHLLFEGKFSQEFIDRCEYGGVMIVRSLCGV-EL*SWSA 227
           Y GEF+YV DH    GK   E   R    GV+  R   GV E+  W+A
Sbjct: 196 YIGEFEYVDDHR--SGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTA 333


>TC86986 GP|440824|gb|AAA61608.1|| ribosomal protein S15 {Arabidopsis
           thaliana}, complete
          Length = 728

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 20/48 (41%), Positives = 24/48 (49%), Gaps = 1/48 (2%)
 Frame = +1

Query: 181 YKGEFDYVSDHLLFEGKFSQEFIDRCEYGGVMIVRSLCGV-EL*SWSA 227
           Y GEF+YV DH    GK   E   R    GV+  R   GV E+  W+A
Sbjct: 241 YIGEFEYVDDHR--SGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTA 378


>TC86130 similar to PIR|T51666|T51666 myb-related transcription factor MYB59
           [imported] - Arabidopsis thaliana, partial (34%)
          Length = 752

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 11/32 (34%), Positives = 18/32 (55%)
 Frame = -3

Query: 111 RKGFASGRSAITVLVPYCSRRVQHHVKCNYSC 142
           +K F+   + +TV  PYCSRR  + +  +  C
Sbjct: 600 KKNFSVNLTVLTV*APYCSRRESNPIMIDMRC 505


>TC88042 similar to GP|23297181|gb|AAN12515.1 phosphoenolpyruvate
           carboxylase kinase {Glycine max}, partial (97%)
          Length = 1237

 Score = 26.9 bits (58), Expect = 8.2
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -3

Query: 184 EFDYVSDHLLFEGKFSQEFIDR---CEYGGVMIVRSLCGVE 221
           EF +V + L   G   + F+D    C YGGV +V    G E
Sbjct: 212 EFRFVFETLAISGIGEERFVDNFDGCWYGGVRVVAPENGTE 90


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.369    0.169    0.685 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,558,868
Number of Sequences: 36976
Number of extensions: 147345
Number of successful extensions: 1877
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 479
Number of HSP's gapped (non-prelim): 1427
length of query: 267
length of database: 9,014,727
effective HSP length: 94
effective length of query: 173
effective length of database: 5,538,983
effective search space: 958244059
effective search space used: 958244059
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 57 (26.6 bits)