BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148755.5 + phase: 0
(569 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non... 206 e-113
TC82520 181 5e-46
TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imp... 176 3e-44
CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [i... 171 9e-43
AW686588 131 8e-31
TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarot... 107 2e-23
BE248682 similar to GP|18568269|gb putative gag-pol polyprotein ... 96 4e-20
TC80751 weakly similar to GP|13161403|dbj|BAB33036. CPRD49 {Vign... 79 4e-15
BQ148771 71 1e-12
BF643502 70 3e-12
BE999296 64 2e-10
BE941032 63 3e-10
BF650593 62 6e-10
TC93136 61 1e-09
BG453645 59 4e-09
BG586749 weakly similar to GP|18138053|emb tropinone reductase I... 57 2e-08
CA921530 53 4e-07
BG456581 53 4e-07
BF520135 52 5e-07
BQ124492 weakly similar to GP|9909168|dbj| putative transposable... 51 1e-06
>TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non-LTR
retroelement reverse transcriptase {Oryza sativa
(japonica cultivar-group)}, partial (2%)
Length = 1262
Score = 206 bits (525), Expect(4) = e-113
Identities = 98/188 (52%), Positives = 122/188 (64%)
Frame = +2
Query: 319 DMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNIQDKWRWLLDPILGYTV 378
DM R GW G W W RRL WEEE VREC LLNN VLQDN+ DKWRWLLDP+ GY+V
Sbjct: 383 DMGRLGWTVDGRAWEWTRRLFVWEEECVRECCILLNNFVLQDNVNDKWRWLLDPVNGYSV 562
Query: 379 KGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAADN 438
K Y ++T+ + DVWH+ +PSKVSLF WRLL++R+ T+ NLV R VL A +
Sbjct: 563 KVFYRYITSTGHISDRSLVDDVWHKHIPSKVSLFVWRLLRNRLPTKDNLVHRGVLLATNA 742
Query: 439 FCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMTRGS 498
CV GC E+ HLF+ C F +W LV +WLGIP + G + HFIQF + GM R S
Sbjct: 743 ACVCGCVDSESTTHLFLHCNVFCSLWSLVRNWLGIPSMSSGELRTHFIQFAKMVGMPRVS 922
Query: 499 HDYLKIIW 506
H Y ++I+
Sbjct: 923 HLYFRLIF 946
Score = 115 bits (288), Expect(4) = e-113
Identities = 50/86 (58%), Positives = 63/86 (73%)
Frame = +3
Query: 240 GGMVKEGGRHSSRWWRMICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPL 299
GG + EGGR SS WW+ IC VR+G G VG WF++NIR VVG+GR+ FFWYD W GDVPL
Sbjct: 144 GGWLCEGGRQSSMWWKTICKVREGVGEGVGNWFEENIRMVVGDGRDAFFWYDTWAGDVPL 323
Query: 300 KFQFSRLFDLAVNKECSVEDMVRAGW 325
+ ++ RL DLA++KEC V + GW
Sbjct: 324 RLKYPRLLDLAMDKECKV-GLTWGGW 398
Score = 76.3 bits (186), Expect(4) = e-113
Identities = 36/43 (83%), Positives = 37/43 (85%)
Frame = +1
Query: 199 GLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGG 241
GLGV G FNLSLLGKWCWRLLVDK GLW+RVLKARYGE GG
Sbjct: 31 GLGV---GAFNLSLLGKWCWRLLVDKEGLWHRVLKARYGEEGG 150
Score = 73.6 bits (179), Expect(4) = e-113
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1
Query: 511 WAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPLFCMG 567
W IWKERNN +F N + P +++R+KL SFLWL S F + + DWW+ L CMG
Sbjct: 946 WVIWKERNNRLFQNTVTAPFVLIDRIKLHSFLWLKSKQVGFAYSYLDWWKNSLLCMG 1116
>TC82520
Length = 833
Score = 181 bits (460), Expect = 5e-46
Identities = 98/238 (41%), Positives = 136/238 (56%), Gaps = 7/238 (2%)
Frame = +2
Query: 338 LLAWEEEGVRECVNLLNNIVLQDNIQDKWRWLLDPILGYTVKGTYCFLTNMEGQVTSGVG 397
L AWEEE VRE LL+N VLQ+N+ D RWLLDPI GYT ++ + + +G
Sbjct: 2 LFAWEEESVREWYALLHNTVLQENVHDVCRWLLDPI*GYTEGNI-----SLSHYLWTTIG 166
Query: 398 FDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYV-LQAADNFCVG------GCGIPETV 450
+ R + + ++++ + RVA+ + AA GCG ET
Sbjct: 167 *ESS*RCLAKE---YSFKGVYVRVASLSQ*TSHEG*FNAATCSSTNSHGLHFGCGDSETA 337
Query: 451 DHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLKIIWLACV 510
HLF+ C FG +W V WL + V + Q FIQFT++AG R +H +L+I+W A V
Sbjct: 338 THLFLHCDIFGSLWSHVLRWLHLLLVLPADIRQFFIQFTSMAGSPRFTHSFLQIMWFASV 517
Query: 511 WAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPLFCMGI 568
W +WK+RNN VF N SDP + VE+VK+ SFLWL A+F F +HDWW++PL CMG+
Sbjct: 518 WVLWKKRNNRVFQNSLSDPSTFVEQVKMHSFLWLKFQQATFSFSYHDWWKHPLLCMGV 691
>TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imported] -
Arabidopsis thaliana, partial (6%)
Length = 951
Score = 176 bits (445), Expect = 3e-44
Identities = 84/152 (55%), Positives = 117/152 (76%)
Frame = +2
Query: 1 MMKTSVLSNLFQPYGVGTRGEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGL 60
+MK+ V + LF Y G V +SHLQFA+DTL++ K+W N+R +RA L++ +SGL
Sbjct: 473 LMKSLVQTQLFTRYSFGVVNPVVVSHLQFANDTLLLETKNWANIRALRAALVIF*AMSGL 652
Query: 61 KVNFNKSMVTGVNISTSWLSEAAAVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRIS 120
KVNF+KS + VNI+ SWLSEAA+VL+ K G +PF+YLG+PI G+ R+L FW+P+++RI
Sbjct: 653 KVNFHKSGLVCVNIAPSWLSEAASVLSWKVGKVPFLYLGMPIEGNSRRLSFWEPIVNRIK 832
Query: 121 ARLSSWNNKYLSSGGRLILLKSVLSSLPVYFL 152
ARL+ WN+++LS GGRL+LLKSVL+SL VY L
Sbjct: 833 ARLTGWNSRFLSFGGRLVLLKSVLTSLSVYAL 928
>CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [imported] -
Sulfolobus solfataricus, partial (3%)
Length = 789
Score = 171 bits (432), Expect = 9e-43
Identities = 74/169 (43%), Positives = 105/169 (61%)
Frame = -2
Query: 400 VWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTS 459
+WHR+VP KVS+FAWRLL+DR+ T++NL+ R V+ CV GCG E+ HLF+ C+
Sbjct: 584 IWHRQVPLKVSVFAWRLLRDRLPTKSNLIYRGVIPTEAGLCVSGCGALESAQHLFLSCSY 405
Query: 460 FGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERNN 519
F +W LV W+G V ++ HF+QF + G + S +L++IWL C W +W ERNN
Sbjct: 404 FASLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGNKASQSFLQLIWLLCAWVLWTERNN 225
Query: 520 CVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPLFCMGI 568
FN+ + ++++VK S WL + ASF FG WW PL C+GI
Sbjct: 224 MCFNDSITPLPRLLDKVKYLSLGWLKARNASFLFGTFSWWSNPLQCLGI 78
>AW686588
Length = 567
Score = 131 bits (329), Expect = 8e-31
Identities = 57/119 (47%), Positives = 76/119 (62%)
Frame = +1
Query: 405 VPSKVSLFAWRLLQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVW 464
VP KVS+ AWRL++DR+ T+ NLVRR L CV GCGI ET +HLF+ C +FG VW
Sbjct: 142 VPLKVSILAWRLIRDRLPTKANLVRRRCLAVEAAGCVVGCGIAETANHLFLHCATFGAVW 321
Query: 465 YLVCHWLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERNNCVFN 523
+ W+G+ ++ HFIQF G TR ++++IWL CVW +W ERNN +FN
Sbjct: 322 QHIRAWIGVSGADPHDLSDHFIQFITCTGHTRARRSFMQLIWLLCVWMVWNERNNRLFN 498
>TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarotenoid
dioxygenase1 {Pisum sativum}, partial (43%)
Length = 1865
Score = 107 bits (266), Expect = 2e-23
Identities = 77/252 (30%), Positives = 117/252 (45%), Gaps = 14/252 (5%)
Frame = -2
Query: 249 HSSRWWRMICNVRDGRGLLVGK--WFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRL 306
++SRWW+ + ++ + VG+ WF + R VG+GR++FFW D W VPL+ F R
Sbjct: 784 YASRWWKDLMSLEE-----VGRVRWFPRELIRKVGDGRSSFFWKDAWDSSVPLRESFPRA 620
Query: 307 FDLAVNKECSVEDMVRAGWEEGGGG--W--VWRR-RLLAWEEEGVRECVNLLNNIVLQDN 361
F + D+ W+ G W WRR L WE+E + E + L +VL+
Sbjct: 619 FFPYRLLKMGCGDL----WDMNAEGVRWRLYWRRLELFEWEKERLLELLGRLEGVVLR-Y 455
Query: 362 IQDKWRWLLDPILGYTVKGTYCFLTNME------GQVTSGVGFDVWHRRVPSKVSLFAWR 415
D W W D ++V Y L N+ + ++W + P+KV F+W
Sbjct: 454 WADIWVWKPDKEGVFSVNSCYFLLQNLRLLEDRLSYEEEVIFRELWKSKAPAKVLAFSWT 275
Query: 416 LLQDRVATRTNLVRRYVLQAADNFCVGGCGI-PETVDHLFIQCTSFGRVWYLVCHWLGIP 474
L DR+ T NL +R +L+ D+ CG ETV HLF+ C +V V WL
Sbjct: 274 LFLDRIPTMVNLGKRRLLRVEDSKRCVFCGCQDETVVHLFLHCDVISKV*REVMRWLNFN 95
Query: 475 CVFQGSVTQHFI 486
+ ++ H I
Sbjct: 94 LISPPNLLIHAI 59
Score = 59.7 bits (143), Expect = 3e-09
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Frame = -3
Query: 192 CLPMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARY-----------GEIG 240
CLP +GGLGVR + N+SLL KW WRLL D++ LW VL+ Y G IG
Sbjct: 969 CLPRCKGGLGVRDIRLVNVSLLAKWWWRLLQDQSSLWKEVLEDIYGPRVSSRTMMVGRIG 790
Query: 241 GMVKEGGRHSSRWWRMICNVRDGRGLLVGKW 271
++ + G WR + +G +G+W
Sbjct: 789 RLMLQDGGKI**VWRRWVGLGGFQGS*LGRW 697
>BE248682 similar to GP|18568269|gb putative gag-pol polyprotein {Zea mays},
partial (1%)
Length = 441
Score = 95.9 bits (237), Expect = 4e-20
Identities = 51/103 (49%), Positives = 69/103 (66%)
Frame = +3
Query: 1 MMKTSVLSNLFQPYGVGTRGEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGL 60
+MK +V NLFQ + V RG R+SHLQ+ADDTL IG + N+ T++A+L E SGL
Sbjct: 93 LMKNAVNRNLFQGFDV-KRGGTRVSHLQYADDTLCIGMPTVDNLWTLKALLQGFEMASGL 269
Query: 61 KVNFNKSMVTGVNISTSWLSEAAAVLNCKTGLIPFMYLGLPIG 103
KVNF+KS + G+N+ ++ A LNC+ IPF+YLGLP G
Sbjct: 270 KVNFHKSSLIGINVPRDFMEAACRFLNCREESIPFIYLGLPGG 398
>TC80751 weakly similar to GP|13161403|dbj|BAB33036. CPRD49 {Vigna
unguiculata}, partial (52%)
Length = 1156
Score = 79.3 bits (194), Expect = 4e-15
Identities = 44/124 (35%), Positives = 61/124 (48%), Gaps = 3/124 (2%)
Frame = +1
Query: 447 PETVDHL-FIQCT--SFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLK 503
PE VD +I C SF W+L PC+ H IQ G +R L
Sbjct: 637 PEDVDWP*YIVCII*SFIHKWFLGVSSTDPPCI-----PDHLIQLVQ*GGYSRSIRSTLL 801
Query: 504 IIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPL 563
++W + +W IWKER+ +FN ++E+VKL SF WL + ++FPF +H PL
Sbjct: 802 LVWFSYMWVIWKERSKMIFNQKKDHVHQLLEKVKLLSF*WLKATNSTFPFDYHSRRLNPL 981
Query: 564 FCMG 567
CMG
Sbjct: 982 LCMG 993
>BQ148771
Length = 680
Score = 70.9 bits (172), Expect = 1e-12
Identities = 36/119 (30%), Positives = 63/119 (52%)
Frame = -3
Query: 118 RISARLSSWNNKYLSSGGRLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGC 177
++ L++W +LS R+ L KSV+ ++P+Y + P I I+ + +K WG
Sbjct: 588 QVHVMLANWKANHLSLARRVTLAKSVIEAVPLYPMMTTIIPKACIEEIQKLQRKFVWGDT 409
Query: 178 EVSRKIAWVKWDSVCLPMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARY 236
EVSR+ V W+++ P + GLG+R+L N + + K W + N L V++ +Y
Sbjct: 408 EVSRRYHAVGWETMSKPKTIYGLGLRRLDVMNKACIMKLGWSIYSGSNSLCTEVMRGKY 232
>BF643502
Length = 631
Score = 69.7 bits (169), Expect = 3e-12
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = -1
Query: 501 YLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWR 560
++++IWL CVW +W ERNN +FN++ + +++++KL S WL + A+F FG
Sbjct: 502 FMQLIWLLCVWVVWNERNNVMFNHVVTPIPCLLDKIKLLSLGWLKAKNATFVFGIQQGRS 323
Query: 561 YPLFCMGI 568
PL C+GI
Sbjct: 322 NPLVCLGI 299
>BE999296
Length = 384
Score = 63.5 bits (153), Expect = 2e-10
Identities = 37/110 (33%), Positives = 50/110 (44%)
Frame = -1
Query: 378 VKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAAD 437
+ G Y FL + + + VWH +P KV F R+L++ + T+ N VRR V+
Sbjct: 306 IHGAYQFLMSADAPLDREYIDSVWHNHIPLKVCFFVLRVLRNCLPTKDNFVRRRVIHEEH 127
Query: 438 NFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQ 487
C GC ET D LF+ W LV WL I V + HF Q
Sbjct: 126 MLCPTGCSFKETTDDLFL--------WPLV*QWLHIS*VNSCVLRDHFYQ 1
>BE941032
Length = 435
Score = 63.2 bits (152), Expect = 3e-10
Identities = 31/96 (32%), Positives = 48/96 (49%)
Frame = +2
Query: 410 SLFAWRLLQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCH 469
S+F W +L +R T+ NL++R V+ A CVG CG HLF+ C F ++W V
Sbjct: 146 SIFLWCVLLNRFPTKDNLLKRGVISAIYQSCVGECGNLYDATHLFLHCNFFRQIWINVSD 325
Query: 470 WLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLKII 505
WL V ++ QF + G + D +++I
Sbjct: 326 WLSFVMVTLLRISDRLAQFGSFGGFSNCKWDTIQLI 433
>BF650593
Length = 486
Score = 62.0 bits (149), Expect = 6e-10
Identities = 30/64 (46%), Positives = 37/64 (56%)
Frame = +3
Query: 402 HRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFG 461
H+ VP KVS WRL Q+ +ATR NL +R VL CV CG E+V H F +C F
Sbjct: 297 HKSVPLKVSCLVWRLFQNXLATRDNLSKRGVLDQNSIXCVXDCGREESVSHFFFEC-PFS 473
Query: 462 RVWY 465
VW+
Sbjct: 474 XVWF 485
Score = 34.3 bits (77), Expect(2) = 0.003
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 226 GLWYRVLKARYGEIGGMVKEGGRHSSRWWRMICNVRDG 263
GLW+R L +YG G + R S WW+ IC + G
Sbjct: 85 GLWFRALVNKYGLNRGSITIENRGVSLWWKDICYIDFG 198
Score = 24.3 bits (51), Expect(2) = 0.003
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 183 IAWVKWDSVCLPMSQG 198
I VKW+ VC P+ +G
Sbjct: 32 ILGVKWEKVCRPLEEG 79
>TC93136
Length = 722
Score = 60.8 bits (146), Expect = 1e-09
Identities = 36/122 (29%), Positives = 55/122 (44%), Gaps = 3/122 (2%)
Frame = +1
Query: 448 ETVDHLFIQCTSFGRVWYLVCHWL---GIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLKI 504
ET HLF+ C VW + WL CVF+ T+G + +
Sbjct: 262 ETSSHLFLHCPFLSSVWSKILGWLYYSKFVCVFR---------LLERRSRTKG----VWL 402
Query: 505 IWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPLF 564
IW A +W IWK NN +F N++ IVE +K+ S+ W + + P +++W P
Sbjct: 403 IWHATIWVIWKGINNRIFKNISKAIDEIVEEIKVLSWRWSLTRLKCPPCFYYEWCWDPGD 582
Query: 565 CM 566
C+
Sbjct: 583 CV 588
>BG453645
Length = 622
Score = 59.3 bits (142), Expect = 4e-09
Identities = 26/119 (21%), Positives = 55/119 (45%)
Frame = +3
Query: 448 ETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLKIIWL 507
ET H+F+ C VW+ V W + + ++ H+ ++ R + + ++W
Sbjct: 57 ETTTHIFLHCDVASLVWFRVMKWFDVNFLIPPNLFVHWECWSEGGSANRVTKGHW-LVWH 233
Query: 508 ACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPLFCM 566
+W +W +RN+ +F L ++E +K+ S W+ ++ F++W P C+
Sbjct: 234 TTIWVLWAKRNDLIFKGLNCVAEDVIEEIKVLS*RWMLERSSTPSCFFYEWSWNPRLCL 410
>BG586749 weakly similar to GP|18138053|emb tropinone reductase I {Calystegia
sepium}, partial (11%)
Length = 787
Score = 56.6 bits (135), Expect = 2e-08
Identities = 34/125 (27%), Positives = 60/125 (47%), Gaps = 1/125 (0%)
Frame = -2
Query: 440 CVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMTRGSH 499
CV G+PE +HLF+QC + +VW + WLG + H+ + ++G +
Sbjct: 531 CVLCEGVPEVSEHLFLQCAT-AKVWADLLRWLGFDYHTPPDLFFHWKWWNEMSGNKKTRK 355
Query: 500 DYLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDW- 558
Y IW+ RN+ +FNN S +VE +K+ ++ W+ + + F++W
Sbjct: 354 GY*---------IIWRVRNDLIFNNSRSGMDELVEAIKVLAWRWVLNRLNLPACMFYEWI 202
Query: 559 WRYPL 563
W + L
Sbjct: 201 WNFLL 187
>CA921530
Length = 793
Score = 52.8 bits (125), Expect = 4e-07
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = -1
Query: 502 LKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRY 561
L +IW A +W +WK NN +FNN A + I+E VK+ S+ W + + +++W
Sbjct: 601 LWLIWHATIWILWKAWNNRIFNNQAVEAEDIIEEVKVLSWRWTFNRINIPVCMYYEWCWN 422
Query: 562 PLFCM 566
P +C+
Sbjct: 421 PKYCL 407
>BG456581
Length = 683
Score = 52.8 bits (125), Expect = 4e-07
Identities = 46/179 (25%), Positives = 80/179 (43%), Gaps = 5/179 (2%)
Frame = +2
Query: 377 TVKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRR-YVLQA 435
T+K Y FLT+ + +W+ +P S WRL DR+ T NL R L +
Sbjct: 17 TIKLVYSFLTSHTS--CAPWASTIWNSCIPPSHSFICWRLAHDRLPTDDNLSSRGCALVS 190
Query: 436 ADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMT 495
+FC+ ET DHLF++C +W +C L + F L+ +
Sbjct: 191 MCSFCLEQV---ETSDHLFLRCKFVVTLWSWLCSQLRVGLDFSSFKAL-------LSSLP 340
Query: 496 RGSHDYLKIIWLAC----VWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVAS 550
R ++ +++A V +IW RNN F++ ++ +V++ + + LS V++
Sbjct: 341 RHCSSQVRDLYVAAVVHMVHSIWWARNNVRFSSAKVSAHAV--QVRVHALIGLSGAVST 511
>BF520135
Length = 202
Score = 52.4 bits (124), Expect = 5e-07
Identities = 23/62 (37%), Positives = 36/62 (57%)
Frame = +3
Query: 400 VWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTS 459
+W + SKVS+FAWRL R+ T+ N+ +R ++ + CV C + E+ HLF+ C
Sbjct: 15 LWRKEDLSKVSIFAWRLFHGRLPTKANVFKRGIVHHDAHMCVTRCRLIESDVHLFLHCDV 194
Query: 460 FG 461
G
Sbjct: 195 LG 200
>BQ124492 weakly similar to GP|9909168|dbj| putative transposable element
Tip100 protein {Oryza sativa (japonica cultivar-group)},
partial (8%)
Length = 694
Score = 51.2 bits (121), Expect = 1e-06
Identities = 23/48 (47%), Positives = 28/48 (57%)
Frame = +2
Query: 448 ETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMT 495
+T HLF+ C F +W V WLGI V G + HF QFTN+AG T
Sbjct: 530 KTARHLFLDCDIFSSLWSQVWLWLGISSVQPGELRHHFPQFTNMAGFT 673
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.326 0.142 0.483
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,080,925
Number of Sequences: 36976
Number of extensions: 462389
Number of successful extensions: 3228
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 3145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3214
length of query: 569
length of database: 9,014,727
effective HSP length: 101
effective length of query: 468
effective length of database: 5,280,151
effective search space: 2471110668
effective search space used: 2471110668
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC148755.5