BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148755.10 - phase: 0 /pseudo
(292 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL371024 similar to GP|17065014|gb Unknown protein {Arabidopsis ... 272 1e-73
TC79543 similar to GP|17065014|gb|AAL32661.1 Unknown protein {Ar... 235 2e-62
TC78091 similar to GP|17104531|gb|AAL34154.1 unknown protein {Ar... 131 6e-47
TC90496 similar to GP|17065014|gb|AAL32661.1 Unknown protein {Ar... 173 8e-44
TC91956 similar to GP|17065014|gb|AAL32661.1 Unknown protein {Ar... 147 5e-36
BG453325 similar to GP|21539459|gb putative protein {Arabidopsis... 132 2e-31
BF644151 similar to GP|17065014|gb| Unknown protein {Arabidopsis... 99 2e-21
TC84909 similar to GP|3395431|gb|AAC28763.1| unknown protein {Ar... 84 2e-18
TC77509 similar to PIR|T51543|T51543 TOM (target of myb1)-like p... 89 2e-18
BE204472 similar to GP|17104531|gb| unknown protein {Arabidopsis... 59 3e-09
TC90796 similar to GP|3395431|gb|AAC28763.1| unknown protein {Ar... 57 6e-09
BQ138976 weakly similar to GP|15450711|gb At1g06210/F9P14_4 {Ara... 57 1e-08
TC92810 weakly similar to GP|18057158|gb|AAL58181.1 hepatocyte g... 52 2e-07
TC87167 GP|11094369|gb|AAG29595.1 Ser/Thr specific protein phosp... 32 0.38
TC82410 similar to GP|3850569|gb|AAC72109.1| ESTs gb|T21276 gb|... 30 1.1
TC76336 similar to GP|6642656|gb|AAF20237.1| unknown protein {Ar... 30 1.1
TC79691 similar to GP|14532838|gb|AAK64101.1 unknown protein {Ar... 28 3.2
TC92433 weakly similar to GP|21592859|gb|AAM64809.1 unknown {Ara... 28 3.2
TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-... 28 3.2
BQ751329 similar to GP|12856306|dbj data source:MGD source key:... 28 4.2
>AL371024 similar to GP|17065014|gb Unknown protein {Arabidopsis thaliana},
partial (22%)
Length = 414
Score = 272 bits (695), Expect = 1e-73
Identities = 137/138 (99%), Positives = 138/138 (99%)
Frame = +1
Query: 92 KKSDLPVREQIFLLLDATQTSLGGASGKFPQYYKAYYDLVSAGVQFPQRAQVVQSNRPSL 151
KKSDLPVREQIF+LLDATQTSLGGASGKFPQYYKAYYDLVSAGVQFPQRAQVVQSNRPSL
Sbjct: 1 KKSDLPVREQIFVLLDATQTSLGGASGKFPQYYKAYYDLVSAGVQFPQRAQVVQSNRPSL 180
Query: 152 QPNTTNNVPKREPSPLRRGRVAQKAESNTVPESRIIQKASNVLEVLKEVLDAVDAKHPQG 211
QPNTTNNVPKREPSPLRRGRVAQKAESNTVPESRIIQKASNVLEVLKEVLDAVDAKHPQG
Sbjct: 181 QPNTTNNVPKREPSPLRRGRVAQKAESNTVPESRIIQKASNVLEVLKEVLDAVDAKHPQG 360
Query: 212 ARDEFTLDLVEQCSFQKQ 229
ARDEFTLDLVEQCSFQKQ
Sbjct: 361 ARDEFTLDLVEQCSFQKQ 414
>TC79543 similar to GP|17065014|gb|AAL32661.1 Unknown protein {Arabidopsis
thaliana}, partial (31%)
Length = 694
Score = 235 bits (599), Expect = 2e-62
Identities = 119/144 (82%), Positives = 133/144 (91%)
Frame = +2
Query: 1 MAAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVM 60
MAAELVNAATSEKL+E DW KNIEI ELVARD+R+A+DVVKAIKKRLG+K+P+AQLYAV
Sbjct: 263 MAAELVNAATSEKLAETDWAKNIEICELVARDKRQARDVVKAIKKRLGSKHPDAQLYAVT 442
Query: 61 LLEMLMNNIGDHINEQVVRAEVIPILVKIVKKKSDLPVREQIFLLLDATQTSLGGASGKF 120
LLEMLMNN G+HI+EQV+ +IPILVKIVKKKSDLPVRE+IFLLLDATQ+SLGGASGKF
Sbjct: 443 LLEMLMNNTGEHIHEQVIDIGIIPILVKIVKKKSDLPVRERIFLLLDATQSSLGGASGKF 622
Query: 121 PQYYKAYYDLVSAGVQFPQRAQVV 144
PQYY AYYDLV+AGVQFPQ AQ V
Sbjct: 623 PQYYNAYYDLVNAGVQFPQSAQAV 694
>TC78091 similar to GP|17104531|gb|AAL34154.1 unknown protein {Arabidopsis
thaliana}, partial (52%)
Length = 1863
Score = 131 bits (329), Expect(2) = 6e-47
Identities = 78/217 (35%), Positives = 128/217 (58%), Gaps = 12/217 (5%)
Frame = +2
Query: 86 LVKIVKKKSDLPVREQIFLLLDATQTSLGGASGKFPQYYKAYYDLVSAGVQFPQRAQ--V 143
+VKIVKK+ DL VRE+I +L+DA Q + GG SG FPQYY AY +L +AGV+FP R + V
Sbjct: 368 MVKIVKKRPDLSVREKILILIDAWQEAFGGPSGVFPQYYAAYNELKAAGVEFPPREENSV 547
Query: 144 VQSNRPSLQPNTTNNVPKREPSPLRRGRVAQKAESNTVPESRIIQKASNVLEVLKEVLDA 203
P QP N+ + + + ++ + ++ + + I+ A + +VL E+L A
Sbjct: 548 PFFTPPQTQP-IVNSAAEFDDAAIQASLQSDASDLSVLE----IKNAQGLADVLTEMLSA 712
Query: 204 VDAKHPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIEVNEQLQKVLERHDD 263
++ K P+G ++E +DLV+QC ++RVM LV ++ DE ++ + +N+ LQ+VL +HD+
Sbjct: 713 LNPKDPEGVKEEVIVDLVDQCRSYQKRVMLLVNSTADEELLGLGLALNDSLQRVLLQHDN 892
Query: 264 LLSSK--------DTTTVN--HFDHEEAEEEEEPEQL 290
+ DT + H +HE+ E E++ QL
Sbjct: 893 IAKGTANSGAREVDTPVLPLVHVNHEDDESEDDFGQL 1003
Score = 73.9 bits (180), Expect(2) = 6e-47
Identities = 35/81 (43%), Positives = 52/81 (63%)
Frame = +1
Query: 2 AAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVML 61
AA ATS+ L DW NIE+ +++ D R+AKD +K IKKRLG+KNP QL A+ +
Sbjct: 118 AAACAERATSDLLIGPDWAINIELCDIINMDPRQAKDALKIIKKRLGSKNPKIQLLALFV 297
Query: 62 LEMLMNNIGDHINEQVVRAEV 82
LE L N G+ + +Q++ ++
Sbjct: 298 LETLTKNCGESVFQQIIERDI 360
>TC90496 similar to GP|17065014|gb|AAL32661.1 Unknown protein {Arabidopsis
thaliana}, partial (20%)
Length = 700
Score = 173 bits (438), Expect = 8e-44
Identities = 90/90 (100%), Positives = 90/90 (100%)
Frame = +3
Query: 1 MAAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVM 60
MAAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVM
Sbjct: 429 MAAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVM 608
Query: 61 LLEMLMNNIGDHINEQVVRAEVIPILVKIV 90
LLEMLMNNIGDHINEQVVRAEVIPILVKIV
Sbjct: 609 LLEMLMNNIGDHINEQVVRAEVIPILVKIV 698
>TC91956 similar to GP|17065014|gb|AAL32661.1 Unknown protein {Arabidopsis
thaliana}, partial (26%)
Length = 863
Score = 147 bits (371), Expect = 5e-36
Identities = 73/75 (97%), Positives = 74/75 (98%)
Frame = +1
Query: 218 LDLVEQCSFQKQRVMHLVMASRDERIVSRAIEVNEQLQKVLERHDDLLSSKDTTTVNHFD 277
LD VEQCSF+KQRVMHLVMASRDERIVSRAIEVNEQLQKVLERHDDLLSSKDTTTVNHFD
Sbjct: 25 LDFVEQCSFKKQRVMHLVMASRDERIVSRAIEVNEQLQKVLERHDDLLSSKDTTTVNHFD 204
Query: 278 HEEAEEEEEPEQLFR 292
HEEAEEEEEPEQLFR
Sbjct: 205 HEEAEEEEEPEQLFR 249
>BG453325 similar to GP|21539459|gb putative protein {Arabidopsis thaliana},
partial (21%)
Length = 578
Score = 132 bits (332), Expect = 2e-31
Identities = 66/142 (46%), Positives = 93/142 (65%)
Frame = +1
Query: 1 MAAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVM 60
M +V ATS+ L DW NIEI +++ D +AKDVVK IKKR+G++N QL A+
Sbjct: 148 MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALT 327
Query: 61 LLEMLMNNIGDHINEQVVRAEVIPILVKIVKKKSDLPVREQIFLLLDATQTSLGGASGKF 120
LLE ++ N GD ++ V +V+ +VKIVKKK D V+E+I LL+D Q + GG ++
Sbjct: 328 LLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDFHVKEKILLLVDTWQEAFGGPRARY 507
Query: 121 PQYYKAYYDLVSAGVQFPQRAQ 142
PQYY AY +L+ AG FPQR++
Sbjct: 508 PQYYAAYQELLRAGAVFPQRSE 573
>BF644151 similar to GP|17065014|gb| Unknown protein {Arabidopsis thaliana},
partial (11%)
Length = 502
Score = 99.0 bits (245), Expect = 2e-21
Identities = 50/53 (94%), Positives = 51/53 (95%)
Frame = +3
Query: 1 MAAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPN 53
MAAELVNAATSEKLSEIDWMKNIEISEL+ARDQRKA DVVKAIKKRLGN NPN
Sbjct: 342 MAAELVNAATSEKLSEIDWMKNIEISELLARDQRKATDVVKAIKKRLGNPNPN 500
>TC84909 similar to GP|3395431|gb|AAC28763.1| unknown protein {Arabidopsis
thaliana}, partial (17%)
Length = 737
Score = 84.0 bits (206), Expect(2) = 2e-18
Identities = 41/104 (39%), Positives = 68/104 (64%)
Frame = +3
Query: 2 AAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVML 61
A+ V ATS+ L DW NIEI + + + + KDVVKA+KKRL +++ Q+ A+ L
Sbjct: 357 ASVAVEKATSDLLMGPDWTMNIEICDSINSNHWQPKDVVKAVKKRLQHRSSKVQILALTL 536
Query: 62 LEMLMNNIGDHINEQVVRAEVIPILVKIVKKKSDLPVREQIFLL 105
LE ++ N GD+++ Q+ ++ ++KIV+KK+D+ VR++I L
Sbjct: 537 LETMVKNCGDYVHFQITDRHILEEMIKIVRKKADMQVRDKILAL 668
Score = 25.8 bits (55), Expect(2) = 2e-18
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = +2
Query: 113 LGGASGKFPQYYKAY 127
L G GK+PQYY AY
Sbjct: 692 LEGPGGKYPQYYWAY 736
>TC77509 similar to PIR|T51543|T51543 TOM (target of myb1)-like protein -
Arabidopsis thaliana, partial (78%)
Length = 1562
Score = 89.0 bits (219), Expect = 2e-18
Identities = 69/268 (25%), Positives = 134/268 (49%), Gaps = 7/268 (2%)
Frame = +2
Query: 4 ELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVMLLE 63
+LV ATSE E DW N+++ +L+ ++ + ++++AIKKR+ K P Q A++LLE
Sbjct: 260 KLVEDATSEAHEEPDWAMNLDLCDLINTEKVNSVELIRAIKKRIMIKIPRVQYLALVLLE 439
Query: 64 MLMNNIGDHINEQVVRAEVIPILVKIV-KKKSDLPVREQIFLLLDATQTSLGGASGKFPQ 122
++ N +E V V+ +V+++ ++ + R + ++++A S G P
Sbjct: 440 TVVKNCEKAFSE-VAAERVLDEMVRVIDDPQTVVNNRNKALVMIEAWGESTGELR-YLPV 613
Query: 123 YYKAYYDLVSAGVQFPQRAQVVQSNRPSLQPNTTNNVPKREPSPLRRGRVAQKAESNTVP 182
+ + Y L S G++FP R + SL P T P P + ++ + +
Sbjct: 614 FEETYKSLRSRGIRFPGR------DNESLAPIFTPPRSATVPEPPHVDDIPRQFQQDVPV 775
Query: 183 ESRIIQKASNVLEVLK---EVLDAVDAKHPQG--ARDEFTLDLVEQCSFQKQRVMHLVMA 237
+ ++ ++ + E+L V + PQ +D+ T LV+QC + V +V
Sbjct: 776 QGYTEEQTKEAFDIARNSIELLSTVLSSSPQQDVLQDDLTATLVQQCRRSQITVQRIVET 955
Query: 238 SRD-ERIVSRAIEVNEQLQKVLERHDDL 264
+ D E I+ A+ VN+++ KVL ++++L
Sbjct: 956 AGDNEAILFEALNVNDEILKVLTKYEEL 1039
>BE204472 similar to GP|17104531|gb| unknown protein {Arabidopsis thaliana},
partial (12%)
Length = 647
Score = 58.5 bits (140), Expect = 3e-09
Identities = 29/60 (48%), Positives = 39/60 (64%)
Frame = +3
Query: 2 AAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVML 61
AA ATS+ L DW NIE+ +++ D R+AKD +K IKKRLG+KNP QL A+ +
Sbjct: 195 AAACAERATSDLLIGPDWAINIELCDIINMDPRQAKDALKIIKKRLGSKNPKIQLLALFV 374
>TC90796 similar to GP|3395431|gb|AAC28763.1| unknown protein {Arabidopsis
thaliana}, partial (20%)
Length = 965
Score = 57.4 bits (137), Expect = 6e-09
Identities = 24/80 (30%), Positives = 50/80 (62%)
Frame = +2
Query: 187 IQKASNVLEVLKEVLDAVDAKHPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSR 246
++ +VL++L ++L AV+ +DE DLV++C ++++M ++ + DE ++ R
Sbjct: 8 LESMRHVLDLLSDMLQAVNPNDRVAVKDEVIGDLVDRCRSNQKKLMQMLTTTGDEELLGR 187
Query: 247 AIEVNEQLQKVLERHDDLLS 266
+E+N+ +Q +L RHD + S
Sbjct: 188 GLELNDNIQSLLARHDAIAS 247
>BQ138976 weakly similar to GP|15450711|gb At1g06210/F9P14_4 {Arabidopsis
thaliana}, partial (43%)
Length = 657
Score = 56.6 bits (135), Expect = 1e-08
Identities = 38/133 (28%), Positives = 72/133 (53%), Gaps = 1/133 (0%)
Frame = +3
Query: 3 AELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVMLL 62
+++V+ ATSE LSE +W N+ I L+ ++ ++VKAIK+++ +K+P Q +++ LL
Sbjct: 255 SKIVDEATSETLSEPNWGMNLRICGLINAEEFNGSEIVKAIKRKINHKSPIVQKHSLDLL 434
Query: 63 EMLMNNIGDHINEQVVRAEVIPILVKIVK-KKSDLPVREQIFLLLDATQTSLGGASGKFP 121
E N D + ++ +V+ +V++++ + D R + F L+ A S A P
Sbjct: 435 ETCAMNC-DKVFSEIASEKVLDDMVRLIENNQGDGGNRRRAFQLVRAWGESXDIA--YLP 605
Query: 122 QYYKAYYDLVSAG 134
+ + Y L G
Sbjct: 606 VFSQTYMSLKGRG 644
>TC92810 weakly similar to GP|18057158|gb|AAL58181.1 hepatocyte growth
factor-regulated tyrosine kinase substrate-like protein
{Oryza sativa}, partial (33%)
Length = 481
Score = 52.4 bits (124), Expect = 2e-07
Identities = 35/89 (39%), Positives = 50/89 (55%)
Frame = +1
Query: 2 AAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVML 61
A +LV ATSE L E +W + I ++V ++ DVV+AIKKR+ K+ Q A++L
Sbjct: 208 AEKLVYEATSESLDEPNWDMILNICDMVNAEKLYTCDVVRAIKKRIMMKSVRGQYLALVL 387
Query: 62 LEMLMNNIGDHINEQVVRAEVIPILVKIV 90
LE L+ N E V V+ +VKIV
Sbjct: 388 LEALVENCDKGFFE-VATERVLDEMVKIV 471
>TC87167 GP|11094369|gb|AAG29595.1 Ser/Thr specific protein phosphatase 2A B
regulatory subunit alpha isoform, complete
Length = 2319
Score = 31.6 bits (70), Expect = 0.38
Identities = 20/49 (40%), Positives = 25/49 (50%), Gaps = 5/49 (10%)
Frame = -3
Query: 135 VQFPQRAQVVQSNRPSLQPNTTNN-----VPKREPSPLRRGRVAQKAES 178
+ F ++VV S P QPNT N V R+PSPLR+ K ES
Sbjct: 1534 IGFLLASKVVASVLPGAQPNTRNRLL*DPVETRDPSPLRQHSNLSKIES 1388
>TC82410 similar to GP|3850569|gb|AAC72109.1| ESTs gb|T21276 gb|T45403 and
gb|AA586113 come from this gene. {Arabidopsis thaliana},
partial (8%)
Length = 606
Score = 30.0 bits (66), Expect = 1.1
Identities = 17/44 (38%), Positives = 27/44 (60%), Gaps = 2/44 (4%)
Frame = +1
Query: 245 SRAIEVNEQLQKVLERHD--DLLSSKDTTTVNHFDHEEAEEEEE 286
++ + V E +KV+ER D + SSK+ ++V H E EEEE+
Sbjct: 127 NKEVSVGESDEKVIERKDGDEKPSSKNESSVVESKHMENEEEED 258
>TC76336 similar to GP|6642656|gb|AAF20237.1| unknown protein {Arabidopsis
thaliana}, partial (77%)
Length = 1086
Score = 30.0 bits (66), Expect = 1.1
Identities = 41/189 (21%), Positives = 70/189 (36%), Gaps = 7/189 (3%)
Frame = +1
Query: 51 NPNAQLYAVMLLEMLMNNIGDHINEQVVRAEVIPILVKIVKKKSDLPVREQIFLLLDATQ 110
NP LL NN + + + +V A + ++++ + P+ ++ +
Sbjct: 373 NPRYLPETYSLLTHNCNNFSNEVAQFLVGATIPDYILQLPNEVMSSPMGSLFLPMIQNLE 552
Query: 111 TSLGGASGKFPQYYKAYYDLVSAGVQFPQRAQVVQSNRPSLQPNTTNNVPKREPSPLRRG 170
T+L SG PQ + VS F V + + S PN++ + +G
Sbjct: 553 TTL--KSGGVPQVPQFRPTTVSPASNFAS----VTTQKSSTAPNSSTEKKAIPSKEVAKG 714
Query: 171 RVAQKAESNTVPESRIIQKASNVLEVLKEVLDAVDAKHPQGARDEF-------TLDLVEQ 223
+ K N V S ASN V+K+ L +K EF T+ E
Sbjct: 715 KEEDKKTENAVSASEKAAAASN--GVVKDPLGDARSKVQDEIIKEFAAIMATGTMRASEA 888
Query: 224 CSFQKQRVM 232
+ +RVM
Sbjct: 889 AALATRRVM 915
>TC79691 similar to GP|14532838|gb|AAK64101.1 unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 741
Score = 28.5 bits (62), Expect = 3.2
Identities = 21/81 (25%), Positives = 39/81 (47%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 AELVNAATSEKLSEIDWMKNIEISELVARDQRK-AKDVVKAIKKRLGNKNPNAQLYAVML 61
+ L+++ATS++ K EI EL+ K+V + KRL +K+P + A+ L
Sbjct: 267 SRLIDSATSDEDKVAPVYKLEEICELLRSSHVSIVKEVSDFVLKRLDHKSPIVKQKALRL 446
Query: 62 LEMLMNNIGDHINEQVVRAEV 82
++ + G ++ R V
Sbjct: 447 IKYAVGKSGAEFRREMQRHSV 509
>TC92433 weakly similar to GP|21592859|gb|AAM64809.1 unknown {Arabidopsis
thaliana}, partial (53%)
Length = 686
Score = 28.5 bits (62), Expect = 3.2
Identities = 20/73 (27%), Positives = 36/73 (48%)
Frame = +1
Query: 218 LDLVEQCSFQKQRVMHLVMASRDERIVSRAIEVNEQLQKVLERHDDLLSSKDTTTVNHFD 277
+DLV + K V L++A ER++ + + + +LQ +L+ H L D T+
Sbjct: 274 MDLVSNPTL*KITVTMLLIAITRERVMFKVVVILLELQHLLKHHQ--LQHLDVFTLQVQA 447
Query: 278 HEEAEEEEEPEQL 290
+E + + P QL
Sbjct: 448 MQELHQLDHPVQL 486
>TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-related
protein complex AP-3 beta 1 subunit {Mus musculus},
partial (2%)
Length = 931
Score = 28.5 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 140 RAQVVQSNRPSLQPNTTNNVPKREPSP 166
R+ +V S P + P T NVP+R+P P
Sbjct: 512 RSSLVLSV*PKVAPETIQNVPRRKPPP 592
>BQ751329 similar to GP|12856306|dbj data source:MGD source key:MGI:106908
evidence:ISS~putative~serine/arginine-rich protein
specific, partial (22%)
Length = 767
Score = 28.1 bits (61), Expect = 4.2
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Frame = +2
Query: 67 NNIGDHINEQVVRA---------EVIPILVKIVKKKSDLPVREQIFLLLDA 108
N G H+ +VVR+ + I +L KIV+ K D P R+ + LLD+
Sbjct: 572 NTSGKHVALKVVRSAAHYTETAIDEIKLLNKIVQAKPDHPGRKHVVSLLDS 724
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.314 0.130 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,483,435
Number of Sequences: 36976
Number of extensions: 68194
Number of successful extensions: 378
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of query: 292
length of database: 9,014,727
effective HSP length: 95
effective length of query: 197
effective length of database: 5,502,007
effective search space: 1083895379
effective search space used: 1083895379
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Medicago: description of AC148755.10