BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148607.1 + phase: 0 /pseudo
(296 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BQ138652 similar to GP|20522008|d pleiotropic drug resistance li... 357 e-107
TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20 ... 103 6e-23
TC84278 similar to PIR|T02567|T02567 probable ATP-binding casset... 72 3e-13
TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC... 64 1e-12
AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis t... 63 2e-10
TC86205 similar to PIR|A86289|A86289 probable ABC transporter [i... 60 8e-10
TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transp... 60 8e-10
BQ139036 similar to GP|14423315|g ATP-binding cassette transport... 60 8e-10
TC88124 weakly similar to PIR|T45888|T45888 ABC transporter-like... 60 1e-09
BE205528 similar to GP|12382006|d putative ABC transporter prote... 59 2e-09
TC93816 similar to GP|9279716|dbj|BAB01273.1 ABC transporter {Ar... 58 4e-09
AW685718 homologue to GP|20522008|d pleiotropic drug resistance ... 57 1e-08
TC89547 similar to GP|12382007|dbj|BAB21276. putative ABC transp... 55 2e-08
BF633427 similar to GP|22128707|gb| putative ABC transporter {Or... 53 2e-07
BF639812 similar to GP|22128707|gb| putative ABC transporter {Or... 50 8e-07
TC83582 similar to GP|22128707|gb|AAM92819.1 putative ABC transp... 48 5e-06
TC78215 similar to GP|10177549|dbj|BAB10828. ABC transporter-lik... 47 1e-05
AL382068 homologue to GP|9279716|dbj ABC transporter {Arabidopsi... 45 3e-05
TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Ar... 44 6e-05
TC83850 weakly similar to GP|7300071|gb|AAF55241.1| CG4225 gene ... 41 5e-04
>BQ138652 similar to GP|20522008|d pleiotropic drug resistance like protein
{Nicotiana tabacum}, partial (15%)
Length = 670
Score = 357 bits (917), Expect(2) = e-107
Identities = 173/189 (91%), Positives = 182/189 (95%)
Frame = +2
Query: 48 REKDANIKPDPDIDVYMKAVATEGQKENLITDYVLRVLGLEICADTVVGNAMIRAISGGQ 107
REK ANI PDPDIDVYMKA+ATEGQK NLITDYVLR+LGLEICADTVVGNAM+R ISGGQ
Sbjct: 104 REKHANIMPDPDIDVYMKAIATEGQKANLITDYVLRILGLEICADTVVGNAMLRGISGGQ 283
Query: 108 KKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIVNSMRQYVHILKGTVVISLLQPPPET 167
KKR+TTGEMLVGP KALFMDEISTGLDSSTTFQIVNSM+Q+VHILKGT VISLLQPPPET
Sbjct: 284 KKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSMKQFVHILKGTAVISLLQPPPET 463
Query: 168 YNLFDDIILLSDSHIIYQGPREHVLEFFESIGFKCPNRKGVADFLQEVTSRKDQEQYWEH 227
YNLFDDIILLSDSHIIYQGPREHVLEFFESIGFKCP+RKGVADFLQEVTSRKDQEQYWEH
Sbjct: 464 YNLFDDIILLSDSHIIYQGPREHVLEFFESIGFKCPDRKGVADFLQEVTSRKDQEQYWEH 643
Query: 228 KDRPYRFIT 236
KD+PY F+T
Sbjct: 644 KDQPYXFVT 670
Score = 49.3 bits (116), Expect(2) = e-107
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +1
Query: 21 *SSHWRNDC*RNLGLLS*SPRSWTSL* 47
*SSHWRNDC*RNLG LS PRSW SL*
Sbjct: 1 *SSHWRNDC*RNLGFLSKGPRSWASL* 81
>TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20
{Arabidopsis thaliana}, partial (44%)
Length = 1366
Score = 103 bits (258), Expect = 6e-23
Identities = 56/160 (35%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Frame = +3
Query: 60 IDVYMKAVATEGQKENLITDYVLRVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVG 119
I++ + +++ +++ + + + + GL CADT VG+A +R ISGG+KKRL+ L+
Sbjct: 654 IELQLHNISSAEERDEYVNNLLFKT-GLVSCADTNVGDAKVRGISGGEKKRLSLACELLA 830
Query: 120 PTKALFMDEISTGLDSSTTFQIVNSMRQYVHILKG-TVVISLLQPPPETYNLFDDIILLS 178
+F DE +TGLD+ +++ ++RQ L G TV+ S+ QP Y+ FDDI+LL+
Sbjct: 831 SPSVIFADEPTTGLDAFQAEKVMETLRQLA--LDGHTVICSIHQPRGSVYSKFDDIVLLT 1004
Query: 179 DSHIIYQGPR-EHVLEFFESIGFKCPNRKGVADFLQEVTS 217
D ++Y GP + L +F G+ CP+ A+FL ++ S
Sbjct: 1005DGSLVYAGPAGDEPLTYFSKFGYHCPDHVNPAEFLADLIS 1124
>TC84278 similar to PIR|T02567|T02567 probable ATP-binding cassette protein
T16B24.1 - Arabidopsis thaliana, partial (28%)
Length = 835
Score = 71.6 bits (174), Expect = 3e-13
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +3
Query: 73 KENLITDYVLRVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEISTG 132
K+N ++ LGL A TV+G+ R +SGG+++R++ G ++ LF+DE ++G
Sbjct: 81 KKNARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSG 260
Query: 133 LDSSTTFQIVNSMRQYVHILKGTVVI-SLLQPPPETYNLFDDIILLSDSHIIYQGPREHV 191
LDS++ F +V +++ G++VI S+ QP L D +I LS +Y G +
Sbjct: 261 LDSTSAFMVVKVLQRIAQ--SGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPSQL 434
Query: 192 LEFFESIGFKCPNRKGVADF 211
+F G P +F
Sbjct: 435 PSYFAEFGHPIPEGDNRTEF 494
>TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC
transporter protein {Arabidopsis thaliana}, partial
(29%)
Length = 977
Score = 64.3 bits (155), Expect(2) = 1e-12
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Frame = +3
Query: 115 EMLVGPTKALFMDEISTGLDSSTTFQIVNSMRQYVHI--LKGTVVISLLQPPPETYNLFD 172
E+L P + LF+DE ++GLDS+ ++ ++ + ++ T+V S+ QP E + LF
Sbjct: 549 EILTRP-RLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIVASIHQPSTEVFQLFH 725
Query: 173 DIILLSDSHIIYQGPREHVLEFFESIGFKCPNRKGVADFLQEVTSRKDQEQ 223
++ LLS +Y GP EFF S GF CP + +D L + T KD +Q
Sbjct: 726 NLCLLSSGKTVYFGPASAASEFFASNGFPCPPLQNPSDHLLK-TINKDFDQ 875
Score = 25.8 bits (55), Expect(2) = 1e-12
Identities = 15/45 (33%), Positives = 27/45 (59%), Gaps = 1/45 (2%)
Frame = +2
Query: 67 VATEGQKENLITDYVLRVLGLEICADTVVGNA-MIRAISGGQKKR 110
++ E +KE D+ +R +GL+ +T +++ ISGGQK+R
Sbjct: 404 MSNEEKKER--ADFTIREMGLQDAINTRNRKGGVLKGISGGQKRR 532
>AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis thaliana},
partial (13%)
Length = 573
Score = 62.8 bits (151), Expect = 2e-10
Identities = 40/134 (29%), Positives = 72/134 (52%), Gaps = 6/134 (4%)
Frame = -3
Query: 71 GQKENL-ITDYVLRVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEI 129
G +E + + V+ ++ L+ D +VG + +S Q+KRLT LV +FMDE
Sbjct: 556 GNEEKMQFVEQVMDLVELQSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEP 377
Query: 130 STGLDSSTTFQIVNSMRQYVHILKGTVVISLLQPPPETYNLFDDIILLS-DSHIIYQGP- 187
++GLD+ ++ ++R V + TVV ++ QP + + FD++IL+ ++Y GP
Sbjct: 376 TSGLDARAAAIVMRTVRNTVDTGR-TVVCTIHQPSIDIFEAFDELILMKRGGQLVYGGPL 200
Query: 188 ---REHVLEFFESI 198
++E+FE I
Sbjct: 199 GRNSHKIIEYFEEI 158
>TC86205 similar to PIR|A86289|A86289 probable ABC transporter [imported] -
Arabidopsis thaliana, partial (52%)
Length = 2721
Score = 60.5 bits (145), Expect = 8e-10
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Frame = +1
Query: 70 EGQKENLITDYVLRVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEI 129
+ + D V+ ++ L +++VG + +S Q+KRLT LV +FMDE
Sbjct: 1036 DSNTRKMFIDEVMDLVELNSLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1215
Query: 130 STGLDSSTTFQIVNSMRQYVHILKGTVVISLLQPPPETYNLFDDIILLS-DSHIIYQGP- 187
++GLD+ ++ ++R V + TVV ++ QP + + FD++ L+ IY GP
Sbjct: 1216 TSGLDARAAAIVMRTVRNTVDTGR-TVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1392
Query: 188 ---REHVLEFFESIG--FKCPNRKGVADFLQEVTS 217
H++++FESI K + A ++ EVT+
Sbjct: 1393 GRHSTHLIKYFESIDGVSKIKDGYNPATWMLEVTT 1497
>TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transporter
protein {Oryza sativa (japonica cultivar-group)},
partial (25%)
Length = 1108
Score = 60.5 bits (145), Expect = 8e-10
Identities = 46/159 (28%), Positives = 83/159 (51%), Gaps = 8/159 (5%)
Frame = +3
Query: 72 QKENLITDYVLRVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEIST 131
+ + + V+ ++ L+ + +VG + +S Q+KRLT LV +FMDE ++
Sbjct: 111 ETRKMFVEEVMELVELKPLQNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 290
Query: 132 GLDSSTTFQIVNSMRQYVHILKGTVVISLLQPPPETYNLFDDIILLSD-SHIIYQGPREH 190
GLD+ ++ ++R V+ + TVV ++ QP + + FD+++LL IY GP H
Sbjct: 291 GLDARAAAIVMRTVRNTVNTGR-TVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGH 467
Query: 191 ----VLEFFESIG--FKCPNRKGVADFLQEV-TSRKDQE 222
++ +FE I K + A ++ EV TS K++E
Sbjct: 468 NSSNLINYFEGIHGVSKIKDGYNPATWMLEVTTSSKERE 584
>BQ139036 similar to GP|14423315|g ATP-binding cassette transporter Atr5
{Mycosphaerella graminicola}, partial (14%)
Length = 673
Score = 60.5 bits (145), Expect = 8e-10
Identities = 45/158 (28%), Positives = 79/158 (49%), Gaps = 11/158 (6%)
Frame = +1
Query: 79 DYVLRVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVG-PTKALFMDEISTGLDSST 137
D ++ +L L T++G +S Q+KR+T G LV P+ +F+DE ++GLD
Sbjct: 13 DTIIELLELYDLEHTLIGRVGA-GLSVEQRKRVTIGVELVSKPSILIFLDEPTSGLDGQA 189
Query: 138 TFQIVNSMRQYVHILKGTVVISLLQPPPETYNLFDDIILLS-DSHIIYQGP----REHVL 192
F V +R+ + + V++++ QP + + FD ++LL+ +Y G + V
Sbjct: 190 AFNTVRFLRKLADVGQ-AVLVTIHQPSAQLFAQFDTLLLLAKGGKTVYFGEIGDNGDTVK 366
Query: 193 EFFESIGFKCPNRKGVADFLQEV-----TSRKDQEQYW 225
E+F+ G CP A+F+ +V + KD Q W
Sbjct: 367 EYFDRNGVPCPRDVNPAEFMIDVVTGTHANEKDWHQVW 480
>TC88124 weakly similar to PIR|T45888|T45888 ABC transporter-like protein -
Arabidopsis thaliana, partial (27%)
Length = 1641
Score = 59.7 bits (143), Expect = 1e-09
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Frame = +3
Query: 87 LEICADTVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIVNSMR 146
L+ D++VG A +S Q+KRLT LV +FMDE ++GLD+ ++ +++
Sbjct: 9 LDDIKDSLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVK 188
Query: 147 QYVHILKGTVVISLLQPPPETYNLFDDIILL-SDSHIIYQGPREH----VLEFFESIGF- 200
V + T V ++ QP + + FD++IL+ S IIY G H ++E+F+SI
Sbjct: 189 NVVTTGR-TTVCTIHQPSIDIFETFDELILMKSGGKIIYNGALGHHSSRLIEYFQSISGV 365
Query: 201 -KCPNRKGVADFLQEVTSRKDQEQ 223
K + A ++ E TS +++
Sbjct: 366 PKIKDNYNPATWMLEATSAAVEDE 437
>BE205528 similar to GP|12382006|d putative ABC transporter protein {Oryza
sativa (japonica cultivar-group)}, partial (14%)
Length = 617
Score = 59.3 bits (142), Expect = 2e-09
Identities = 38/132 (28%), Positives = 70/132 (52%), Gaps = 5/132 (3%)
Frame = +1
Query: 72 QKENLITDYVLRVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEIST 131
+ + + V+ ++ L+ + +VG + +S Q+KRLT LV +FMDE ++
Sbjct: 166 ETRKMFVEEVMELVELKPLQNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 345
Query: 132 GLDSSTTFQIVNSMRQYVHILKGTVVISLLQPPPETYNLFDDIILLSD-SHIIYQGPREH 190
GLD+ ++ ++R V+ + TVV ++ QP + + FD+++LL IY GP H
Sbjct: 346 GLDARAAAIVMRTVRNTVNTGR-TVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGH 522
Query: 191 ----VLEFFESI 198
++ +FE I
Sbjct: 523 NSSNLINYFEGI 558
>TC93816 similar to GP|9279716|dbj|BAB01273.1 ABC transporter {Arabidopsis
thaliana}, partial (16%)
Length = 743
Score = 58.2 bits (139), Expect = 4e-09
Identities = 39/131 (29%), Positives = 70/131 (52%), Gaps = 7/131 (5%)
Frame = +1
Query: 94 VVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIVNSMRQYVHILK 153
+VG + +S Q+KRLT L+ +FMDE ++GLD+ ++ ++R V +
Sbjct: 1 IVGLPGVTGLSTEQRKRLTIAVELIANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR 180
Query: 154 GTVVISLLQPPPETYNLFDDIILLS-DSHIIYQGP----REHVLEFFESIGF--KCPNRK 206
TVV ++ QP + + FD+++L+ +IY GP ++E+FE+I K +
Sbjct: 181 -TVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKY 357
Query: 207 GVADFLQEVTS 217
A ++ EV+S
Sbjct: 358 NPATWMLEVSS 390
>AW685718 homologue to GP|20522008|d pleiotropic drug resistance like protein
{Nicotiana tabacum}, partial (12%)
Length = 613
Score = 56.6 bits (135), Expect = 1e-08
Identities = 37/134 (27%), Positives = 69/134 (50%), Gaps = 5/134 (3%)
Frame = +2
Query: 70 EGQKENLITDYVLRVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEI 129
+ + + V+ ++ L +++VG + +S Q+KRLT LV +FMDE
Sbjct: 71 DSNTRKMFIEEVMELVELNPLRNSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 250
Query: 130 STGLDSSTTFQIVNSMRQYVHILKGTVVISLLQPPPETYNLFDDIILLS-DSHIIYQGP- 187
++GLD+ ++ ++R V + TVV ++ QP + + FD++ L+ IY GP
Sbjct: 251 TSGLDARAAAIVMRTVRNTVDTGR-TVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVGPL 427
Query: 188 ---REHVLEFFESI 198
++++FESI
Sbjct: 428 GRHSSQLIKYFESI 469
>TC89547 similar to GP|12382007|dbj|BAB21276. putative ABC transporter
protein {Oryza sativa (japonica cultivar-group)},
partial (28%)
Length = 1283
Score = 55.5 bits (132), Expect = 2e-08
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Frame = +3
Query: 82 LRVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQI 141
+ ++ L + +VG +S Q+KRLT LV +FMDE ++GLD+ +
Sbjct: 6 MELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 185
Query: 142 VNSMRQYVHILKGTVVISLLQPPPETYNLFDDIILLS-DSHIIYQGPR----EHVLEFFE 196
+ ++R V + TVV ++ QP + ++ FD+++L+ IY GP H++ +FE
Sbjct: 186 MRTVRNTVDTGR-TVVCTIHQPSIDIFDAFDELLLMKLGGEQIYSGPLGRHCAHLIHYFE 362
Query: 197 SIGF--KCPNRKGVADFLQEVTS 217
+I K + A ++ EVTS
Sbjct: 363 AIEGVPKIKDGYNPATWMLEVTS 431
>BF633427 similar to GP|22128707|gb| putative ABC transporter {Oryza sativa
(japonica cultivar-group)}, partial (10%)
Length = 384
Score = 52.8 bits (125), Expect = 2e-07
Identities = 26/85 (30%), Positives = 52/85 (60%), Gaps = 2/85 (2%)
Frame = +1
Query: 101 RAISGGQKKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIVNSMRQYV--HILKGTVVI 158
+ +SGGQ++RL+ ++ + LF+DE ++GLDS+ ++ +++++ ++ T+V
Sbjct: 130 KGLSGGQRRRLSICIEILTHPRLLFLDEPTSGLDSAASYYVMSTIASLSLRDDIQRTIVA 309
Query: 159 SLLQPPPETYNLFDDIILLSDSHII 183
+ QP E + LFDD+ LLS +
Sbjct: 310 FIHQPSSEVFQLFDDLCLLSSGETV 384
>BF639812 similar to GP|22128707|gb| putative ABC transporter {Oryza sativa
(japonica cultivar-group)}, partial (9%)
Length = 308
Score = 50.4 bits (119), Expect = 8e-07
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +3
Query: 152 LKGTVVISLLQPPPETYNLFDDIILLSDSHIIYQGPREHVLEFFESIGFKCPNRKGVADF 211
++ T++ S+ QP E + LF ++ LLS +Y GP EFF GF CP + +D
Sbjct: 51 IRRTIITSIHQPSTEVFQLFHNLCLLSSGRTVYFGPASTACEFFALNGFPCPPLQNPSDH 230
Query: 212 LQEVTSRKDQEQ 223
L + T KD +Q
Sbjct: 231 LLK-TINKDFDQ 263
>TC83582 similar to GP|22128707|gb|AAM92819.1 putative ABC transporter
{Oryza sativa (japonica cultivar-group)}, partial (52%)
Length = 1158
Score = 47.8 bits (112), Expect = 5e-06
Identities = 38/141 (26%), Positives = 61/141 (42%), Gaps = 3/141 (2%)
Frame = +2
Query: 159 SLLQPPPETYNLFDDIILLSDSHIIYQGPREHVLEFFESIGFKCPNRKGVAD-FLQEVTS 217
S+ QP E + LFD + LLS +Y G EFF GF CP + +D FL+ + S
Sbjct: 17 SIHQPSSEVFELFDQLYLLSGGKTVYFGQASDAYEFFAQAGFPCPALRNPSDHFLRCINS 196
Query: 218 RKDQEQYWEHKDRPYRFITAEEFSEAFQTFHVGRRLGDELGTEFDKSNSHPAALTTKKYG 277
D+ + RF +++ + T R L D +++ H A K
Sbjct: 197 DFDKVKATLKGSMKLRFEASDDPLDKITTAEAIRTLIDHY-----RTSQHSYAARQKVDD 361
Query: 278 VGKIE--LLKACSSTEYLLIE 296
+ K+ +L+A S L++
Sbjct: 362 ISKVRGTVLEAGGSEASFLLQ 424
>TC78215 similar to GP|10177549|dbj|BAB10828. ABC transporter-like protein
{Arabidopsis thaliana}, partial (36%)
Length = 1176
Score = 46.6 bits (109), Expect = 1e-05
Identities = 30/101 (29%), Positives = 54/101 (52%)
Frame = +1
Query: 93 TVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIVNSMRQYVHIL 152
T VG IR +SGGQK+R+ L+ K L +DE ++ LD+ + + + ++M I+
Sbjct: 388 TFVGERGIR-LSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDS---IM 555
Query: 153 KGTVVISLLQPPPETYNLFDDIILLSDSHIIYQGPREHVLE 193
KG V+ ++ T + + ++SD I+ G + +LE
Sbjct: 556 KGRTVL-VIAHRLSTVKTANTVAVVSDGQIVESGTHDELLE 675
>AL382068 homologue to GP|9279716|dbj ABC transporter {Arabidopsis thaliana},
partial (6%)
Length = 274
Score = 45.4 bits (106), Expect = 3e-05
Identities = 26/80 (32%), Positives = 45/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 109 KRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIVNSMRQYVHILKGTVVISLLQPPPETY 168
KRLT LV +FMDE ++GLD+ ++ ++R V + TVV ++ +P + +
Sbjct: 3 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR-TVVCTIHEPSIDIF 179
Query: 169 NLFDDIILLS-DSHIIYQGP 187
FD+++L+ +IY GP
Sbjct: 180 EAFDELLLMKRGGQVIYAGP 239
>TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Arabidopsis
thaliana}, partial (25%)
Length = 663
Score = 44.3 bits (103), Expect = 6e-05
Identities = 23/80 (28%), Positives = 45/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 54 IKPDPDIDVYMKAVATEGQKE-NLITDYVLRVLGLEICADTVVGNAMIRAISGGQKKRLT 112
+K +++ +T ++E N + D + +GL CAD ++GN + ISGG++KR +
Sbjct: 422 VKETITYSAHLRLPSTMSKEEINGLVDATIIEMGLHDCADRLIGNWHLXGISGGERKRTS 601
Query: 113 TGEMLVGPTKALFMDEISTG 132
++ + LF+DE ++G
Sbjct: 602 IALEILTRPRXLFLDEPTSG 661
>TC83850 weakly similar to GP|7300071|gb|AAF55241.1| CG4225 gene product
{Drosophila melanogaster}, partial (23%)
Length = 816
Score = 41.2 bits (95), Expect = 5e-04
Identities = 28/110 (25%), Positives = 54/110 (48%)
Frame = +2
Query: 83 RVLGLEICADTVVGNAMIRAISGGQKKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIV 142
R+L +T VG ++ +SGG+++R+ ++ + L +DE + LDS T QI
Sbjct: 332 RILNFPDGYETKVGERGLK-LSGGERQRIAIARAILKDARILLLDEATASLDSHTERQIQ 508
Query: 143 NSMRQYVHILKGTVVISLLQPPPETYNLFDDIILLSDSHIIYQGPREHVL 192
+++ + + G I++ T D I++L S I+ +G +L
Sbjct: 509 DALER---VTAGRTTITIAH-RLSTITTSDQIVVLHKSKIVERGTHSELL 646
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.327 0.141 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,884,638
Number of Sequences: 36976
Number of extensions: 115198
Number of successful extensions: 673
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of query: 296
length of database: 9,014,727
effective HSP length: 95
effective length of query: 201
effective length of database: 5,502,007
effective search space: 1105903407
effective search space used: 1105903407
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC148607.1