BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148484.5 - phase: 0
(519 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78883 similar to GP|8843731|dbj|BAA97279.1 zinc finger protein... 600 0.0
TC78882 homologue to GP|8843731|dbj|BAA97279.1 zinc finger prote... 449 e-134
TC88547 similar to PIR|F96592|F96592 probable zinc finger protei... 326 1e-89
TC88531 homologue to GP|14597044|emb|CAC43563. unnamed protein p... 319 2e-87
TC84551 homologue to GP|14597044|emb|CAC43563. unnamed protein p... 318 4e-87
TC87148 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No de... 314 5e-86
BG584080 similar to GP|4204303|gb| lcl|prt_seq No definition lin... 290 1e-78
TC83115 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No de... 252 2e-67
BM814721 homologue to GP|14597044|em unnamed protein product {Ar... 196 2e-50
TC84340 homologue to PIR|F96704|F96704 hypothetical protein T23K... 162 2e-48
TC81124 homologue to GP|14597044|emb|CAC43563. unnamed protein p... 177 9e-45
TC78261 homologue to PIR|A86468|A86468 probable zinc finger prot... 91 1e-18
TC82819 homologue to PIR|T06753|T06753 zinc finger protein F15B8... 87 2e-17
TC90105 weakly similar to GP|10241636|emb|CAC09475. putative zin... 60 2e-09
TC89882 similar to PIR|A86468|A86468 probable zinc finger protei... 54 1e-07
TC80733 homologue to SP|Q01233|HS70_NEUCR Heat shock 70 kDa prot... 42 4e-04
CA921028 similar to GP|14335046|gb| AT5g44160/MLN1_8 {Arabidopsi... 42 7e-04
BM813155 similar to GP|14335046|gb| AT5g44160/MLN1_8 {Arabidopsi... 39 0.004
TC78817 similar to GP|14597044|emb|CAC43563. unnamed protein pro... 38 0.008
TC86849 similar to GP|14190431|gb|AAK55696.1 AT5g02770/F9G14_80 ... 37 0.024
>TC78883 similar to GP|8843731|dbj|BAA97279.1 zinc finger protein
{Arabidopsis thaliana}, partial (28%)
Length = 1674
Score = 600 bits (1547), Expect(3) = 0.0
Identities = 309/310 (99%), Positives = 309/310 (99%)
Frame = +3
Query: 172 VFSRRDSFITHRAFCDALAEENAKSQNQAVGKANSESDSKVLTGDSLPAVITTTAAAAAT 231
VFSRRDSFITHRAFCDALAEENAKSQNQAVGKANSESDSKVLTGDSLPAVITTTAAAAAT
Sbjct: 48 VFSRRDSFITHRAFCDALAEENAKSQNQAVGKANSESDSKVLTGDSLPAVITTTAAAAAT 227
Query: 232 TPQSNSGVSSALETQKLDLPENPPQIIEEPQVVVTTTASALNASCSSSTSSKSNGCAATS 291
TPQSNSGVSSALETQKLDLPENPPQIIEEPQVVVTTTASALNASCSSSTSSKSNGCAATS
Sbjct: 228 TPQSNSGVSSALETQKLDLPENPPQIIEEPQVVVTTTASALNASCSSSTSSKSNGCAATS 407
Query: 292 TGVFASLFASSTASASASLQPQAPAFSDLIRSMGCTDPRPTDFSAPPSSEAISLCLSTSH 351
TGVFASLFASSTASASASLQPQAPAFSDLIRSMGCTDPRPTDFSAPPSSEAISLCLSTSH
Sbjct: 408 TGVFASLFASSTASASASLQPQAPAFSDLIRSMGCTDPRPTDFSAPPSSEAISLCLSTSH 587
Query: 352 GSSIFGTGGQECRQYVPTHQPPAMSATALLQKAAQMGAAATNASLLRGLGIVSSSASTSS 411
GSSIFGTGGQECRQYVPTHQPPAMSATALLQKAAQMGAAATNASLLRGLGIVSSSASTSS
Sbjct: 588 GSSIFGTGGQECRQYVPTHQPPAMSATALLQKAAQMGAAATNASLLRGLGIVSSSASTSS 767
Query: 412 GQQDSLHWGLGPMEPEGSSLVSAGLGLGLPCDADSGLKELMLGTPSMFGPKQTTLDFLGL 471
GQQDSLHWGLGPMEPEGSSLVSAGLGLGLPCDADSGLKELMLGTPSMFGPKQTTLDFLGL
Sbjct: 768 GQQDSLHWGLGPMEPEGSSLVSAGLGLGLPCDADSGLKELMLGTPSMFGPKQTTLDFLGL 947
Query: 472 GMAAGGSAGG 481
GMAAGGSA G
Sbjct: 948 GMAAGGSARG 977
Score = 78.2 bits (191), Expect(3) = 0.0
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 481 GGLSALITSIGGGSGLDVTAAAASFGNGEFSGKDIGRSS 519
GGLSALITSIGGGSGLDVTAAAASFGNGEFSGKDIGRSS
Sbjct: 976 GGLSALITSIGGGSGLDVTAAAASFGNGEFSGKDIGRSS 1092
Score = 40.0 bits (92), Expect(3) = 0.0
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2
Query: 157 SKVCGSREYKCDCGTVF 173
SKVCGSREYKCDCGT F
Sbjct: 2 SKVCGSREYKCDCGTRF 52
>TC78882 homologue to GP|8843731|dbj|BAA97279.1 zinc finger protein
{Arabidopsis thaliana}, partial (35%)
Length = 983
Score = 449 bits (1155), Expect(2) = e-134
Identities = 214/215 (99%), Positives = 214/215 (99%)
Frame = +3
Query: 1 MVDLDNVSTASGEASISSSGNNNIQSPIPKPTKKKRNLPGMPDPEAEVIALSPTTLLATN 60
MVDLDNVSTASGEASISSSGNNNIQSPIPKPTKKKRNLPGMPDPEAEVIALSPTTLLATN
Sbjct: 156 MVDLDNVSTASGEASISSSGNNNIQSPIPKPTKKKRNLPGMPDPEAEVIALSPTTLLATN 335
Query: 61 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPEPTCVHHDPSRALG 120
RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPEPTCVHHDPSRALG
Sbjct: 336 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPEPTCVHHDPSRALG 515
Query: 121 DLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKCDCGTVFSRRDSFI 180
DLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKCDCGTVFSRRDSFI
Sbjct: 516 DLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKCDCGTVFSRRDSFI 695
Query: 181 THRAFCDALAEENAKSQNQAVGKANSESDSKVLTG 215
THRAFCDALAEENAKSQNQAVGKANSESDSK LTG
Sbjct: 696 THRAFCDALAEENAKSQNQAVGKANSESDSKGLTG 800
Score = 68.6 bits (166), Expect = 6e-12
Identities = 35/41 (85%), Positives = 35/41 (85%)
Frame = +2
Query: 478 SAGGGLSALITSIGGGSGLDVTAAAASFGNGEFSGKDIGRS 518
S G SALITSIGGGSGLDVT AAA FGNGEFSGKDIGRS
Sbjct: 860 SNSGVSSALITSIGGGSGLDVTXAAAXFGNGEFSGKDIGRS 982
Score = 47.4 bits (111), Expect(2) = e-134
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +2
Query: 219 PAVITTTAAAAATTPQSNSGVSSALET 245
PA ITTTAAAAATTPQSNSGVSSAL T
Sbjct: 812 PAGITTTAAAAATTPQSNSGVSSALIT 892
>TC88547 similar to PIR|F96592|F96592 probable zinc finger protein
[imported] - Arabidopsis thaliana, partial (43%)
Length = 1765
Score = 326 bits (836), Expect = 1e-89
Identities = 150/194 (77%), Positives = 174/194 (89%), Gaps = 2/194 (1%)
Frame = +2
Query: 3 DLDNVSTASGEASISSSGNNNIQSPIPKP-TKKKRNLPGMPDPEAEVIALSPTTLLATNR 61
++ N+++AS E S SS+ N S +P TK+KRNLPG PDPEA+V+ALSP TLLATNR
Sbjct: 527 NMSNLTSASSEISASSATKNGKASTNLEPQTKRKRNLPGHPDPEAQVLALSPQTLLATNR 706
Query: 62 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEI-RKRVYVCPEPTCVHHDPSRALG 120
F+CEICNKGFQRDQNLQLH+RGHNLPWKL++R+ EI RK+VYVCPEPTCVHHDPSRALG
Sbjct: 707 FICEICNKGFQRDQNLQLHKRGHNLPWKLKKRNVNEIIRKKVYVCPEPTCVHHDPSRALG 886
Query: 121 DLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKCDCGTVFSRRDSFI 180
DLTGIKKHF RKHGEKKWKCEKCSK+YAVQSDWKAHSK+CG++EYKCDCGT+FSRRDSFI
Sbjct: 887 DLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFI 1066
Query: 181 THRAFCDALAEENA 194
THRAFCD L++E+A
Sbjct: 1067THRAFCDVLSQESA 1108
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 369 THQPPAMSATALLQKAAQMGAAATN 393
T P MSATALLQKA+Q+G +
Sbjct: 1316 TTASPHMSATALLQKASQIGVTTVS 1390
>TC88531 homologue to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (27%)
Length = 898
Score = 319 bits (817), Expect = 2e-87
Identities = 143/191 (74%), Positives = 167/191 (86%)
Frame = +1
Query: 5 DNVSTASGEASISSSGNNNIQSPIPKPTKKKRNLPGMPDPEAEVIALSPTTLLATNRFVC 64
+N S + + S+ ++ P+ P KK+RN PG P+P+AEVIALSP TL+ATNRFVC
Sbjct: 169 ENQSQITQQHQSSTDASSTAAQPLV-PQKKRRNQPGTPNPDAEVIALSPKTLMATNRFVC 345
Query: 65 EICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPEPTCVHHDPSRALGDLTG 124
E+C KGFQR+QNLQLHRRGHNLPWKL+Q+S+KE +++VY+CPEPTCVHHDPSRALGDLTG
Sbjct: 346 EVCQKGFQREQNLQLHRRGHNLPWKLKQKSNKEPKRKVYLCPEPTCVHHDPSRALGDLTG 525
Query: 125 IKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKCDCGTVFSRRDSFITHRA 184
IKKHF RKHGEKKWKCEKCSKKYAVQSDWKAHSK CG+REY+CDCGT+FSRRDSFITHRA
Sbjct: 526 IKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRA 705
Query: 185 FCDALAEENAK 195
FCDALA ENA+
Sbjct: 706 FCDALAHENAR 738
>TC84551 homologue to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (27%)
Length = 1133
Score = 318 bits (814), Expect = 4e-87
Identities = 139/175 (79%), Positives = 159/175 (90%)
Frame = +2
Query: 31 PTKKKRNLPGMPDPEAEVIALSPTTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 90
P KK+RN PG P+P+AEVIALSP TL+ATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL
Sbjct: 203 PQKKRRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKL 382
Query: 91 RQRSSKEIRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQ 150
+Q+S+KE R++VY+CPEPTCVHHDPSRALGDLTGIKKHF RKHGEKKWKCEKCSKKYAVQ
Sbjct: 383 KQKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQ 562
Query: 151 SDWKAHSKVCGSREYKCDCGTVFSRRDSFITHRAFCDALAEENAKSQNQAVGKAN 205
SDWKAHSK CG+REY+CDCGT+FSRRDSFITHRAFCDALA+E+ + G +
Sbjct: 563 SDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESVLRHHNPFGSTH 727
>TC87148 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No definition
line found {Arabidopsis thaliana}, partial (29%)
Length = 845
Score = 314 bits (805), Expect = 5e-86
Identities = 142/176 (80%), Positives = 159/176 (89%)
Frame = +3
Query: 6 NVSTASGEASISSSGNNNIQSPIPKPTKKKRNLPGMPDPEAEVIALSPTTLLATNRFVCE 65
+ ST + + S+ N ++Q P+ KKKRNLPG PDP AEVIALSPTTL+ATNRFVCE
Sbjct: 330 HTSTTTNNNNNSNGSNTDLQPPL----KKKRNLPGNPDPSAEVIALSPTTLMATNRFVCE 497
Query: 66 ICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPEPTCVHHDPSRALGDLTGI 125
ICNKGFQRDQNLQLHRRGHNLPWKL+QR+S EIRKRVYVCPEP+CVHH+P+RALGDLTGI
Sbjct: 498 ICNKGFQRDQNLQLHRRGHNLPWKLKQRTSAEIRKRVYVCPEPSCVHHNPARALGDLTGI 677
Query: 126 KKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKCDCGTVFSRRDSFIT 181
KKHFCRKHGEKKWKC+KCSKKYAVQSDWKAHSK+CG+REYKCDCGT+FSRRDSFIT
Sbjct: 678 KKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFIT 845
>BG584080 similar to GP|4204303|gb| lcl|prt_seq No definition line found
{Arabidopsis thaliana}, partial (28%)
Length = 771
Score = 290 bits (741), Expect = 1e-78
Identities = 130/169 (76%), Positives = 148/169 (86%)
Frame = +3
Query: 6 NVSTASGEASISSSGNNNIQSPIPKPTKKKRNLPGMPDPEAEVIALSPTTLLATNRFVCE 65
N S++ + +S+G+ N Q KKKRNLPG PDP AEV+ALSPTTL+ATNRFVCE
Sbjct: 279 NDSSSGPSGACNSNGSTNQQQ-----NKKKRNLPGTPDPTAEVVALSPTTLMATNRFVCE 443
Query: 66 ICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPEPTCVHHDPSRALGDLTGI 125
ICNKGFQRDQNLQLHRRGHNLPWKLRQR+S E++K+VYVCPEP+CVHH+PSRALGDLTGI
Sbjct: 444 ICNKGFQRDQNLQLHRRGHNLPWKLRQRTSAEVKKKVYVCPEPSCVHHNPSRALGDLTGI 623
Query: 126 KKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKCDCGTVFS 174
KKHF RKHGEKKWKC+KCSK+YAVQSDWKAH K CG+REYKCDCGT+FS
Sbjct: 624 KKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFS 770
>TC83115 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No definition
line found {Arabidopsis thaliana}, partial (25%)
Length = 519
Score = 252 bits (644), Expect = 2e-67
Identities = 116/155 (74%), Positives = 132/155 (84%)
Frame = +2
Query: 2 VDLDNVSTASGEASISSSGNNNIQSPIPKPTKKKRNLPGMPDPEAEVIALSPTTLLATNR 61
+D ++ A+ + + S +NN P K+K+NLPG PDPEAEVIALSP TL+ATNR
Sbjct: 68 MDEVEITNANFPQNPTMSASNN-----PPALKRKKNLPGNPDPEAEVIALSPKTLMATNR 232
Query: 62 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPEPTCVHHDPSRALGD 121
F+CE C KGFQRDQNLQLHRRGHNLPWKL+QR++KEI+KRVYVCPE TCVHHDPSRALGD
Sbjct: 233 FLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEIKKRVYVCPEKTCVHHDPSRALGD 412
Query: 122 LTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAH 156
LTGIKKHFCRKHGEKKWKCEKCSK+YAVQSDWKAH
Sbjct: 413 LTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAH 517
>BM814721 homologue to GP|14597044|em unnamed protein product {Arabidopsis
thaliana}, partial (17%)
Length = 771
Score = 196 bits (497), Expect = 2e-50
Identities = 83/95 (87%), Positives = 93/95 (97%)
Frame = +1
Query: 101 RVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVC 160
RVY+CPEPTCVHHDPSRALGDLTGIKKH+ RKHGEKKWKCEKCSKKYAVQSDWKAHSK C
Sbjct: 1 RVYLCPEPTCVHHDPSRALGDLTGIKKHYFRKHGEKKWKCEKCSKKYAVQSDWKAHSKTC 180
Query: 161 GSREYKCDCGTVFSRRDSFITHRAFCDALAEENAK 195
G++EY+CDCGT+FSRRDSFITHRAFCDALA+E+++
Sbjct: 181 GTKEYRCDCGTLFSRRDSFITHRAFCDALAQESSR 285
>TC84340 homologue to PIR|F96704|F96704 hypothetical protein T23K23.2
[imported] - Arabidopsis thaliana, partial (33%)
Length = 692
Score = 162 bits (410), Expect(2) = 2e-48
Identities = 77/129 (59%), Positives = 97/129 (74%)
Frame = +1
Query: 5 DNVSTASGEASISSSGNNNIQSPIPKPTKKKRNLPGMPDPEAEVIALSPTTLLATNRFVC 64
+++S +S +S S N N S K+KR G PDP+AEV++LSP TLL ++R+VC
Sbjct: 187 NSLSPSSLPSSEPFSCNENGTS---STNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC 357
Query: 65 EICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPEPTCVHHDPSRALGDLTG 124
EICN+GFQRDQNLQ+HRR H +PWKL +R + +RKRV+VCPEPTC+HHDP ALGDL G
Sbjct: 358 EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVG 537
Query: 125 IKKHFCRKH 133
IKKHF RKH
Sbjct: 538 IKKHFRRKH 564
Score = 48.9 bits (115), Expect(2) = 2e-48
Identities = 19/27 (70%), Positives = 23/27 (84%)
Frame = +2
Query: 136 KKWKCEKCSKKYAVQSDWKAHSKVCGS 162
K+W CE+CSK YAVQSD+KAH K CG+
Sbjct: 575 KQWVCERCSKGYAVQSDYKAHLKTCGT 655
>TC81124 homologue to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (21%)
Length = 1609
Score = 177 bits (449), Expect = 9e-45
Identities = 148/418 (35%), Positives = 193/418 (45%), Gaps = 28/418 (6%)
Frame = +1
Query: 120 GDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKCDCGTVFSRRDSF 179
GDLTGIKKH+ RKHGEKKWKC+KCSKKYAVQSDWKAHSK CG+REY+CDCGT+FSRRDSF
Sbjct: 1 GDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSF 180
Query: 180 ITHRAFCDALAEENAKSQN-QAVGKANSESDSKVLTGDSLPAVITTTAAAAATTPQ---- 234
ITHRAFCDALA+E + G S +++ I AA Q
Sbjct: 181 ITHRAFCDALAQEGPRQPPISLTGAIGSHLYGSSSNNNTMGLSIAQVAAQMPNMQQQDHH 360
Query: 235 -SNS-------GVSSALETQKLDLPENPPQIIEEPQVVVTTTASALNASCSSSTSSKSNG 286
SNS G ++A + + D PQ P N + S+ G
Sbjct: 361 SSNSATEILRLGAAAANRSGQFD-HHMLPQATFRPNSFFNNNIHEPNQNFVPHDPSQQQG 537
Query: 287 CAATST--GVFASLFASSTASASASLQPQAPAFSDLIRSMGCTDPRPTDF--SAPPSSEA 342
++ ++LF +S S +FS+ + T+F + +S A
Sbjct: 538 LMMQNSHNSNNSNLFNMPNFLSSNSTNSSNNSFSEHLN----VKNEGTNFFNGSGGTSSA 705
Query: 343 ISLCLSTSHGSSIFGTGGQECRQYVPTHQPPAMSATALLQKAAQMGAAATN------ASL 396
SL S++F GG +MSATALLQKAAQMGA ++N SL
Sbjct: 706 PSLF------SNVFSQGGNSNINAAAGTAISSMSATALLQKAAQMGATSSNGNGTTATSL 867
Query: 397 LRGLG-IVSSSASTSSGQQDSLHWGLGPMEPEGSSLVSAGLGLGLPCDADSGLKELMLGT 455
L+ G +S STSSG D +G S G G S L++LM
Sbjct: 868 LKSFGNNTGASNSTSSGGGDHSRVQMGG--------GSGNYGFGGGNHEQSNLQDLM--- 1014
Query: 456 PSMFGPKQTTLDFLGLGMAAGGSA----GGGLSALITSIGGGSGLDVTAAAASFGNGE 509
+ F T F G GG GGG S+ +T G G ++ + + G+
Sbjct: 1015-NSFAATGNTSIFDQSGGGGGGGVGLGRGGGDSSQLTRDFLGVGHEIVRSMSGVVGGQ 1185
>TC78261 homologue to PIR|A86468|A86468 probable zinc finger protein
58191-56692 [imported] - Arabidopsis thaliana, partial
(29%)
Length = 975
Score = 90.9 bits (224), Expect = 1e-18
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Frame = +1
Query: 69 KGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRK--------RVYVCPEPTCVH---HDPSR 117
KGF+RD NL++H RGH +K +K ++ + Y CP C H +
Sbjct: 4 KGFKRDANLRMHMRGHGDEYKTPAALAKPHKETGSEPKLIKRYSCPYGGCKRNKDHKKFQ 183
Query: 118 ALGDLTGIKKHFCRKHGEKKWKCEKC-SKKYAVQSDWKAHSKVCGSREYKCDCGTVFSRR 176
L + +K H+ R H +K + C +C +KK++V +D K H K CG ++ C CGT FSR+
Sbjct: 184 PLKTILCVKNHYKRTHCDKSYTCSRCHTKKFSVMADLKTHEKHCGKDKWLCSCGTTFSRK 363
Query: 177 DSFITHRAFCDALAEENAKSQNQAVGKANSESDSKVLTGDSLPAVITTTAAAAATTPQSN 236
D H A N+ + D++ A++ +T + P S
Sbjct: 364 DKLFGHIALFQGHTPAIPLEDNKVSAEPPDRCDTR-----ENSAMVGSTNFCFGSNPSSE 528
Query: 237 SGVSSALETQ-KLDLPEN 253
+GV ++ + +D P N
Sbjct: 529 NGVDGIMDVKGNIDDPIN 582
>TC82819 homologue to PIR|T06753|T06753 zinc finger protein F15B8.140 -
Arabidopsis thaliana, partial (50%)
Length = 1064
Score = 87.0 bits (214), Expect = 2e-17
Identities = 64/200 (32%), Positives = 87/200 (43%), Gaps = 20/200 (10%)
Frame = +1
Query: 3 DLDNVSTASGEASISSS--GNNNIQSPIPK----------PTKKKRNLPGMPDPEAEVIA 50
D V+ G SISSS ++NI K P K R +P P I
Sbjct: 265 DAVTVALHLGLPSISSSDLASSNIYKDDEKVVTVDSSECPPNKISRGQYWIPTPAQ--IL 438
Query: 51 LSPTTLLATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLRQRSSKEIRKRVYVC 105
+ PT +F C +C K F R N+Q+H GH P LR + + C
Sbjct: 439 IGPT------QFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYC 600
Query: 106 PEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGS 162
P C + H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H K CG
Sbjct: 601 CAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGK 780
Query: 163 REYKCDCGTVFSRRDSFITH 182
Y C CG+ F + S H
Sbjct: 781 LWY-CCCGSDFKHKRSLKDH 837
>TC90105 weakly similar to GP|10241636|emb|CAC09475. putative zinc finger
protein {Oryza sativa}, partial (21%)
Length = 653
Score = 60.5 bits (145), Expect = 2e-09
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +3
Query: 38 LPGMPDPEAEVIALSPTTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKE 97
L + D + E++ L LLA + CEIC KGF+RD NL++H R H +K + +K
Sbjct: 342 LAAVEDSDCEIVELDAMELLAEHLHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKP 521
Query: 98 I----RKRVYVCPEPTC---VHHDPSRALGDLTGIKKHFCRKH 133
+ R + CP C H +AL + +K HF H
Sbjct: 522 LNMVRRPTQFSCPFEGCNRNKKHKKFKALKSVICVKTHFKXSH 650
>TC89882 similar to PIR|A86468|A86468 probable zinc finger protein
58191-56692 [imported] - Arabidopsis thaliana, partial
(9%)
Length = 513
Score = 54.3 bits (129), Expect = 1e-07
Identities = 28/84 (33%), Positives = 43/84 (50%), Gaps = 5/84 (5%)
Frame = +2
Query: 138 WKCEKCSKK-YAVQSDWKAHSKVCGSREYKCDCGTVFSRRDSFITHRAFCD----ALAEE 192
+ C C KK Y++ SD K+H + CG ++KC CG+ FSR+D H A + A+ E
Sbjct: 2 YSCNLCRKKNYSMLSDLKSHMRQCGESKWKCSCGSTFSRKDKLFGHVALFEGHMPAVVLE 181
Query: 193 NAKSQNQAVGKANSESDSKVLTGD 216
+ Q V + N + L+ D
Sbjct: 182 DEVKGKQVVAEENEDPMEMALSKD 253
>TC80733 homologue to SP|Q01233|HS70_NEUCR Heat shock 70 kDa protein
(HSP70). {Neurospora crassa}, partial (54%)
Length = 1258
Score = 42.4 bits (98), Expect = 4e-04
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Frame = +3
Query: 218 LPAVITTTAAAAATTPQSNSGVSSAL----ETQKLDLPENPPQIIEEPQVVVTTTASALN 273
LP V+T +AT+ S V ++ ++++ +PP + V ++TT S+
Sbjct: 714 LPTVLTRRLRVSATS*FSTLVVVLSMFPS*PSRRVSSRSSPPLVTLTWVVRISTTVSSTT 893
Query: 274 ASCSSSTSSKSNGCAATSTGVFASLFASSTASASASLQPQAPAFSDL-IRSMGCTDPRPT 332
+S SSS S++ C T AS +S SA P+ P S L R T P P
Sbjct: 894 SSTSSSASTRRT-CPPTLVPCVASALLASVPSAPFPRLPRPPLRSILSSRVSTSTPPSPV 1070
Query: 333 --------DFSAPPSSEAISLCLS 348
SAPPSS + + CL+
Sbjct: 1071LASRSFARTCSAPPSSPSTAFCLT 1142
>CA921028 similar to GP|14335046|gb| AT5g44160/MLN1_8 {Arabidopsis thaliana},
partial (12%)
Length = 658
Score = 41.6 bits (96), Expect = 7e-04
Identities = 29/73 (39%), Positives = 41/73 (55%), Gaps = 2/73 (2%)
Frame = -2
Query: 365 QYVPTHQPPA--MSATALLQKAAQMGAAATNASLLRGLGIVSSSASTSSGQQDSLHWGLG 422
Q+ +HQ + MSATALLQKAAQ+G+ +T+ S L LG+ S + +S + G G
Sbjct: 432 QHQISHQTSSANMSATALLQKAAQIGSTSTDTSFLGSLGLKCS--NNNSTNDVNKFGGTG 259
Query: 423 PMEPEGSSLVSAG 435
S L+S G
Sbjct: 258 MYGTSSSLLISLG 220
>BM813155 similar to GP|14335046|gb| AT5g44160/MLN1_8 {Arabidopsis thaliana},
partial (4%)
Length = 618
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/47 (46%), Positives = 29/47 (60%)
Frame = +1
Query: 375 MSATALLQKAAQMGAAATNASLLRGLGIVSSSASTSSGQQDSLHWGL 421
MSATALLQKAAQ+G +T + L LG+ +S S G + WG+
Sbjct: 475 MSATALLQKAAQIGTTSTESLFLGSLGLRCNSPSQDHG--NKFLWGV 609
>TC78817 similar to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (4%)
Length = 1030
Score = 38.1 bits (87), Expect = 0.008
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +3
Query: 339 SSEAISLCLSTSHGSSIFGTGGQECRQYVPTHQPPAMSATALLQKAAQMGAAATNASLLR 398
SS S L S +S+ + ++ P MSATALLQKAAQMGA +N
Sbjct: 6 SSSTSSPSLQLSSNNSLNNILEENGSLHLSAATSPHMSATALLQKAAQMGATVSN----N 173
Query: 399 GLGIVSSSASTSSGQQDSLHWGL 421
GI++ + ++ +GL
Sbjct: 174 NAGIMTDKTTVATNMMAPPQFGL 242
>TC86849 similar to GP|14190431|gb|AAK55696.1 AT5g02770/F9G14_80
{Arabidopsis thaliana}, partial (30%)
Length = 1788
Score = 36.6 bits (83), Expect = 0.024
Identities = 52/173 (30%), Positives = 69/173 (39%), Gaps = 1/173 (0%)
Frame = -2
Query: 270 SALNASCSSSTSSKSNGCAATSTGVFASLFASSTASASASLQPQAPAFSDLIRSMGCTDP 329
SAL SSS S AA + A FASS+A+ P A + L RS
Sbjct: 572 SALAFFLSSSAGSVLEPGAA-NLARRAFFFASSSAAEVGVGIPNLSALAFLFRSSSFFPS 396
Query: 330 RPTDFSAPPSSEAISLCLSTSHGSSIFGTGGQECRQYVPTHQPPAMSATALLQKAAQMGA 389
P + A P+ A L S S ++ P SA + ++ GA
Sbjct: 395 GPCNTDAVPNLSARELRFSFSDNLTVI----------------PNRSARRIFF*TSESGA 264
Query: 390 AATNASLLRGLGIVSSSASTSSGQQDSLHWGLGPMEPEGSSLVSAGL-GLGLP 441
+ + + + L + SSSAS S+G WGLG E S VS G GLP
Sbjct: 263 SVSGSVGVVSLDL-SSSASLSAGIGSDSEWGLG----EVGSRVSRGFSSAGLP 120
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.127 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,475,233
Number of Sequences: 36976
Number of extensions: 273752
Number of successful extensions: 1823
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 1685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1786
length of query: 519
length of database: 9,014,727
effective HSP length: 100
effective length of query: 419
effective length of database: 5,317,127
effective search space: 2227876213
effective search space used: 2227876213
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC148484.5