BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148483.19 - phase: 0
(230 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BE319841 weakly similar to GP|21592320|gb| unknown {Arabidopsis ... 188 1e-48
BI311086 141 2e-34
BQ122644 69 4e-20
TC83965 weakly similar to GP|21592320|gb|AAM64271.1 unknown {Ara... 86 4e-19
TC79142 78 2e-15
TC80264 similar to GP|21689699|gb|AAM67471.1 putative F-box fami... 54 7e-08
BF648657 34 4e-06
TC86421 similar to GP|2407790|gb|AAB70660.1| grr1 {Glycine max},... 47 5e-06
TC89031 weakly similar to GP|9758141|dbj|BAB08633.1 disease resi... 46 1e-05
TC81222 weakly similar to GP|20197935|gb|AAM15321.1 F-box protei... 45 3e-05
BQ147053 44 7e-05
TC86288 similar to GP|2407790|gb|AAB70660.1| grr1 {Glycine max},... 43 1e-04
TC80249 weakly similar to GP|10716947|gb|AAG21976.1 SKP1 interac... 42 2e-04
TC79219 similar to GP|15810000|gb|AAL06927.1 AT5g23340/MKD15_20 ... 42 3e-04
TC88537 weakly similar to GP|21536818|gb|AAM61150.1 F-box protei... 38 0.003
TC81941 similar to GP|15420162|gb|AAK97303.1 F-box containing pr... 36 0.014
TC86245 weakly similar to GP|9279671|dbj|BAB01228.1 transport in... 36 0.014
BG449485 weakly similar to GP|22136448|gb unknown protein {Arabi... 35 0.031
TC86244 weakly similar to PIR|T48087|T48087 transport inhibitor ... 34 0.041
TC79177 34 0.041
>BE319841 weakly similar to GP|21592320|gb| unknown {Arabidopsis thaliana},
partial (10%)
Length = 363
Score = 188 bits (478), Expect = 1e-48
Identities = 90/105 (85%), Positives = 99/105 (93%)
Frame = +1
Query: 91 GIVQVLGICCNIRHLNLSKCSMVKLEMNFEVPKLEVLNLSYTNVDDEALYMISKSCCGLL 150
GIVQVL +CCNIRHLNLSKCS+V+LE++FEVPKLEVLNLSYT VDDEALYMISKSCCGLL
Sbjct: 49 GIVQVLRMCCNIRHLNLSKCSIVRLEIDFEVPKLEVLNLSYTKVDDEALYMISKSCCGLL 228
Query: 151 KLSLENCNDFTKKGVNHVVENCTQLRKISLDGCHKVHANIVSSMV 195
KLSL++CND TKKGV HVVENCTQLRKISL+GC KVHAN+VS MV
Sbjct: 229 KLSLQDCNDVTKKGVKHVVENCTQLRKISLNGCFKVHANVVSLMV 363
>BI311086
Length = 718
Score = 141 bits (356), Expect = 2e-34
Identities = 78/139 (56%), Positives = 93/139 (66%)
Frame = +1
Query: 91 GIVQVLGICCNIRHLNLSKCSMVKLEMNFEVPKLEVLNLSYTNVDDEALYMISKSCCGLL 150
GI +L C IRHLNL+ S+ L NF++P LEVLNL+ T VDDEALY+IS C LL
Sbjct: 220 GIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTEVDDEALYIISNRCPALL 399
Query: 151 KLSLENCNDFTKKGVNHVVENCTQLRKISLDGCHKVHANIVSSMVSSRPSLRQITAPPTR 210
+L L C+ T KGV HVV NCTQLR+I+LDGC V A +V+SMV SRPSLR+I PP
Sbjct: 400 QLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSRPSLRKIHVPP-- 573
Query: 211 TGAFSARKVKYFLRQGCLV 229
S R K F R GCL+
Sbjct: 574 NFPLSDRNRKLFSRHGCLL 630
>BQ122644
Length = 444
Score = 69.3 bits (168), Expect(2) = 4e-20
Identities = 39/64 (60%), Positives = 49/64 (75%), Gaps = 7/64 (10%)
Frame = +3
Query: 79 LPLTRLV-LQYCI-----GIVQVLGICCNIRHLNLSKCSMVKLE-MNFEVPKLEVLNLSY 131
L LT+L+ L +C GIV VL ICCNIRHLNL++CS +KL +NFEVPKLEVL+LS+
Sbjct: 117 LSLTQLLDLSHCKDVSEEGIVHVLMICCNIRHLNLTRCSRLKLHTLNFEVPKLEVLDLSF 296
Query: 132 TNVD 135
T V+
Sbjct: 297 TRVE 308
Score = 45.4 bits (106), Expect(2) = 4e-20
Identities = 22/36 (61%), Positives = 27/36 (74%)
Frame = +1
Query: 136 DEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVEN 171
+++LY ISKSC GLL+LSL+ C T K V HVVEN
Sbjct: 307 NKSLYWISKSCSGLLQLSLKFCEGVTDK*VTHVVEN 414
Score = 31.2 bits (69), Expect = 0.35
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 152 LSLENCNDFTKKGVNHVVENCTQLRKISLDGCHKV 186
L L +C D +++G+ HV+ C +R ++L C ++
Sbjct: 135 LDLSHCKDVSEEGIVHVLMICCNIRHLNLTRCSRL 239
>TC83965 weakly similar to GP|21592320|gb|AAM64271.1 unknown {Arabidopsis
thaliana}, partial (6%)
Length = 745
Score = 85.9 bits (211), Expect(2) = 4e-19
Identities = 44/68 (64%), Positives = 52/68 (75%), Gaps = 1/68 (1%)
Frame = +1
Query: 91 GIVQVLGICCNIRHLNLSKCSMVKLE-MNFEVPKLEVLNLSYTNVDDEALYMISKSCCGL 149
GI VL CC+IRHL L+ CS V L M F+VPKLEVL+LSYT VDD+ LY I+KSC GL
Sbjct: 478 GIYHVLRRCCDIRHLYLADCSKVNLHRMIFDVPKLEVLDLSYTRVDDKTLYAIAKSCRGL 657
Query: 150 LKLSLENC 157
L+L L+NC
Sbjct: 658 LQLLLQNC 681
Score = 36.2 bits (82), Expect = 0.011
Identities = 24/86 (27%), Positives = 37/86 (42%), Gaps = 7/86 (8%)
Frame = +1
Query: 152 LSLENCNDFTKKGVNHVVENCTQLRKISLDGCHKVHANIVSSMVSSRPSLRQITAPPTRT 211
L L +C+ + +G+ HV+ C +R + L C KV+ + M+ P L + TR
Sbjct: 442 LDLSDCSGISNQGIYHVLRRCCDIRHLYLADCSKVN---LHRMIFDVPKLEVLDLSYTRV 612
Query: 212 G-------AFSARKVKYFLRQGCLVC 230
A S R + L Q C C
Sbjct: 613 DDKTLYAIAKSCRGLLQLLLQNCW*C 690
Score = 25.4 bits (54), Expect(2) = 4e-19
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 159 DFTKKGVNHVVENC 172
D T+KGV VVENC
Sbjct: 686 DVTEKGVERVVENC 727
>TC79142
Length = 1164
Score = 78.2 bits (191), Expect = 2e-15
Identities = 50/95 (52%), Positives = 61/95 (63%), Gaps = 5/95 (5%)
Frame = +3
Query: 1 MLHCFDITFDGIAKALRERPTLRSLSF-SKTNGPVKVRYESAY---TTSHFISSL-SLKC 55
+ C IT GIA A+RERPTL+SLSF ++T + + TS FI SL SLK
Sbjct: 819 LFECDQITIAGIASAIRERPTLKSLSFCNRTYSENSISNDDISHFKVTSDFIDSLVSLKG 998
Query: 56 LASLDLLSSNISDELLSSIATERLPLTRLVLQYCI 90
L SL L S +ISDE+L SIA E LPLTRL L+YC+
Sbjct: 999 LTSLSLRSLDISDEMLYSIAREGLPLTRLALRYCL 1103
>TC80264 similar to GP|21689699|gb|AAM67471.1 putative F-box family protein
AtFBL3 {Arabidopsis thaliana}, partial (4%)
Length = 1305
Score = 53.5 bits (127), Expect = 7e-08
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Frame = +3
Query: 52 SLKCLASLDLLSSNISDELLSSIATERLPLTRLVLQYCIG-----IVQVLGICCNIRHLN 106
+LK L+ + + +SD +L I + L L L CIG I+QV+G CCN+ L+
Sbjct: 414 NLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVVG-CCNLTTLD 590
Query: 107 LSKCSMVKLEMNFEVPKLEVLNLSYTNVDDEALYMISKSCCGLLKLSLENCNDFTKKGVN 166
L+ C V D A+ I+ SC L L LE+C+ T+ G+
Sbjct: 591 LTCCRFVT---------------------DAAISTIANSCPNLACLKLESCDMVTEIGLY 707
Query: 167 HVVENCTQLRKISLDGCHKVH 187
+ +C L ++ L C V+
Sbjct: 708 QIGSSCLMLEELDLTDCSGVN 770
Score = 35.0 bits (79), Expect = 0.024
Identities = 34/122 (27%), Positives = 55/122 (44%), Gaps = 9/122 (7%)
Frame = +3
Query: 71 LSSIATERLPLTRLVLQYCIGIVQVLGI------CCNIRHLNLS--KCSMVKLEMNFEVP 122
L+ IA L +L L++C+ I LGI C ++ L++S K + L +
Sbjct: 12 LAKIAVGCSKLEKLSLKWCLEISD-LGIDLLSKKCFDLNFLDVSYLKVTNESLRSIASLL 188
Query: 123 KLEV-LNLSYTNVDDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENCTQLRKISLD 181
KLEV + + VDD L + K C L + + CN + G+ V+ L +I+
Sbjct: 189 KLEVFIMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVISGHEGLEQINAG 368
Query: 182 GC 183
C
Sbjct: 369 HC 374
>BF648657
Length = 675
Score = 34.3 bits (77), Expect(2) = 4e-06
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 63 SSNISDELLSSIATERLPLTRLVLQYCIGI-----VQVLGICCNIRHLNLSKCSMVKL 115
+S + DE L A+ L L + L YC I +VL IRHLNL+ CS VKL
Sbjct: 499 NSWLRDEYLIMFASIFLNLQLIGLSYCDNISDNSICRVLNRWSKIRHLNLAHCSRVKL 672
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 1 MLHCFDITFDGIAKALRERPTLRSLSFS 28
+ + + IT GIA AL +RPTL SLSFS
Sbjct: 315 IFNSYHITNQGIASALLQRPTLTSLSFS 398
>TC86421 similar to GP|2407790|gb|AAB70660.1| grr1 {Glycine max}, partial
(74%)
Length = 2856
Score = 47.4 bits (111), Expect = 5e-06
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +1
Query: 90 IGIVQVLGICCNIRHLNLSKCSMVKLEMNFEVP----KLEVLNL-SYTNVDDEALYMISK 144
+G+ V C +++ +L S V E E+ KLE L+L + D+AL ++K
Sbjct: 754 LGLKAVASGCPSLKSFSLWNVSSVGDEGLIEIANGCQKLEKLDLCKCPAISDKALITVAK 933
Query: 145 SCCGLLKLSLENCNDFTKKGVNHVVENCTQLRKISLDGCHKVHANIVSSMVSS 197
C L +LSLE+C +G+ + + C L+ IS+ C V ++ + SS
Sbjct: 934 KCPNLTELSLESCPSIRNEGLQAIGKFCPNLKAISIKDCAGVGDQGIAGLFSS 1092
Score = 37.4 bits (85), Expect = 0.005
Identities = 48/188 (25%), Positives = 81/188 (42%), Gaps = 13/188 (6%)
Frame = +1
Query: 22 LRSLSFSKTNGPVKVRYESAYTTSHFISSLSLKCLASLDLLSSNISDELLSSIATERLPL 81
L+SL+ + G V E+ + S+ L A L SD L S + L
Sbjct: 1264 LKSLTIASCRGVTDVGIEAVGKGCPNLKSVHLHKCAFL-------SDNGLISFTKAAISL 1422
Query: 82 TRLVLQYCIGIVQV--LGICCN----IRHLNLSKCSMVK---LEMNFEVPKLEVLNLSYT 132
L L+ C I Q G+ N ++ L++ C +K LE++ P + +LS
Sbjct: 1423 ESLQLEECHRITQFGFFGVLFNCGAKLKALSMISCFGIKDLDLELSPVSPCESLRSLSIC 1602
Query: 133 NVD---DEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENCTQ-LRKISLDGCHKVHA 188
N + L ++ K C L ++ L T G+ ++E+ L K++L GC +
Sbjct: 1603 NCPGFGNATLSVLGKLCPQLQQVELTGLKGVTDAGLLPLLESSEAGLVKVNLSGCVNLTD 1782
Query: 189 NIVSSMVS 196
+VSS+V+
Sbjct: 1783 KVVSSLVN 1806
Score = 35.0 bits (79), Expect = 0.024
Identities = 34/133 (25%), Positives = 56/133 (41%), Gaps = 8/133 (6%)
Frame = +1
Query: 81 LTRLVLQYCIGIVQVLGI------CCNIRHLNLSKCSMVKLEMNFEVPKLEVLNLSYTNV 134
L L + C G+ V GI C N++ ++L KC+ +
Sbjct: 1264 LKSLTIASCRGVTDV-GIEAVGKGCPNLKSVHLHKCAFLS-------------------- 1380
Query: 135 DDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENC-TQLRKISLDGCHKV-HANIVS 192
D L +K+ L L LE C+ T+ G V+ NC +L+ +S+ C + ++
Sbjct: 1381 -DNGLISFTKAAISLESLQLEECHRITQFGFFGVLFNCGAKLKALSMISCFGIKDLDLEL 1557
Query: 193 SMVSSRPSLRQIT 205
S VS SLR ++
Sbjct: 1558 SPVSPCESLRSLS 1596
Score = 29.6 bits (65), Expect = 1.0
Identities = 16/65 (24%), Positives = 28/65 (42%), Gaps = 1/65 (1%)
Frame = +1
Query: 123 KLEVLNL-SYTNVDDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENCTQLRKISLD 181
KL+ L + S V D + + K C L + L C + G+ + L + L+
Sbjct: 1261 KLKSLTIASCRGVTDVGIEAVGKGCPNLKSVHLHKCAFLSDNGLISFTKAAISLESLQLE 1440
Query: 182 GCHKV 186
CH++
Sbjct: 1441 ECHRI 1455
>TC89031 weakly similar to GP|9758141|dbj|BAB08633.1 disease resistance
protein-like {Arabidopsis thaliana}, partial (5%)
Length = 1294
Score = 46.2 bits (108), Expect = 1e-05
Identities = 28/95 (29%), Positives = 49/95 (51%)
Frame = +3
Query: 94 QVLGICCNIRHLNLSKCSMVKLEMNFEVPKLEVLNLSYTNVDDEALYMISKSCCGLLKLS 153
++LG N++ + L K S+ L + + KL + + + + IS + L++LS
Sbjct: 297 ELLGFLSNLKRIRLEKVSVPCLSILKNLQKLSLHMCNTRDAFENYSIQISDAMPNLVELS 476
Query: 154 LENCNDFTKKGVNHVVENCTQLRKISLDGCHKVHA 188
++ CND K + N T L+KIS+ CHK+ A
Sbjct: 477 IDYCNDLIK--LPDGFSNITTLKKISITNCHKLSA 575
>TC81222 weakly similar to GP|20197935|gb|AAM15321.1 F-box protein family
AtFBL11 {Arabidopsis thaliana}, partial (20%)
Length = 1260
Score = 44.7 bits (104), Expect = 3e-05
Identities = 41/152 (26%), Positives = 70/152 (45%), Gaps = 12/152 (7%)
Frame = +1
Query: 66 ISDELLSSIATERLPLTRLVLQYCIGIVQVLGI---CCNIRHLNLSKCS-------MVKL 115
+SD ++ + T + L LVL YC G + + N+R L L + + +V L
Sbjct: 268 MSDIIVRKLVTSLMNLQVLVLCYCFGDISISSFKLPMQNLRKLRLERVTPWMTNDDLVIL 447
Query: 116 EMNF-EVPKLEVLNLSYTNVDDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENCTQ 174
N + +L +L N D + + IS++ GL+ + LE C + T GV+ V+ NC
Sbjct: 448 SQNCRNLVELSLLGCPLLNSDSQQI--ISRAWPGLVSMHLEECGEITANGVS-VLLNCRA 618
Query: 175 LRKISL-DGCHKVHANIVSSMVSSRPSLRQIT 205
L + L + N + S P LR+++
Sbjct: 619 LEDLLLRHNGLGLQRNFILHAASELPLLRKLS 714
>BQ147053
Length = 663
Score = 43.5 bits (101), Expect = 7e-05
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 183 CHKVHANIVSSMVSSRPSLRQITAPPTRTGAFSARKVKYFLRQGCLVC 230
C +V AN++S M+ SRPSLR+ITAPP RK+ L CLVC
Sbjct: 3 CRRVSANVISWMIFSRPSLRKITAPPHFRPRDCDRKL---LSGRCLVC 137
>TC86288 similar to GP|2407790|gb|AAB70660.1| grr1 {Glycine max}, partial
(84%)
Length = 2900
Score = 42.7 bits (99), Expect = 1e-04
Identities = 24/107 (22%), Positives = 48/107 (44%)
Frame = +1
Query: 91 GIVQVLGICCNIRHLNLSKCSMVKLEMNFEVPKLEVLNLSYTNVDDEALYMISKSCCGLL 150
G++++ C I +L+L K + D+AL ++K C L
Sbjct: 799 GLIEIANGCHQIENLDLCKLP---------------------TISDKALIAVAKHCPNLT 915
Query: 151 KLSLENCNDFTKKGVNHVVENCTQLRKISLDGCHKVHANIVSSMVSS 197
+LS+E+C +G++ + + C LR +S+ C V ++ ++ S
Sbjct: 916 ELSIESCPSIGNEGLHAIGKLCPNLRSVSIKNCPGVRDQGIAGLLCS 1056
Score = 29.3 bits (64), Expect = 1.3
Identities = 41/196 (20%), Positives = 75/196 (37%), Gaps = 1/196 (0%)
Frame = +1
Query: 4 CFDITFDGIAKALRERPTLRSLSFSKTNGPVKVRYESAYTTSHFISSLSLKCLASLDLLS 63
C I +G+ + P LRS+S G VR + + + S S+ L L L S
Sbjct: 934 CPSIGNEGLHAIGKLCPNLRSVSIKNCPG---VRDQGI---AGLLCSASI-ILKKLTLES 1092
Query: 64 SNISDELLSSIATERLPLTRLVLQYCIGIVQVLGICCNIRHLNLSKCSMVKLEMNFEVPK 123
+SD L+ I +T LVL + N+++ + + +
Sbjct: 1093 LAVSDYSLAVIGQYGFVVTDLVLNFLP---------------NVTEKGFWVMGNGHALQQ 1227
Query: 124 LEVLNLSYT-NVDDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENCTQLRKISLDG 182
L L + V D L+ + K C + L C+ + G+ + + + L+
Sbjct: 1228 LTSLTIGLCPGVTDIGLHAVGKGCPNVKNFQLRRCSFLSDNGLVSFTKAAPSIVSLQLEE 1407
Query: 183 CHKVHANIVSSMVSSR 198
CH++ V+ + +R
Sbjct: 1408 CHRITQFGVAGAILNR 1455
>TC80249 weakly similar to GP|10716947|gb|AAG21976.1 SKP1 interacting
partner 1 {Arabidopsis thaliana}, partial (72%)
Length = 1197
Score = 42.4 bits (98), Expect = 2e-04
Identities = 38/147 (25%), Positives = 64/147 (42%), Gaps = 5/147 (3%)
Frame = +1
Query: 66 ISDELLSSIATERLPLTRLVLQYCIGI-----VQVLGICCNIRHLNLSKCSMVKLEMNFE 120
++D+ +S IAT L L + YC I V + C NI+ L + + + +
Sbjct: 412 VTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVLKRNLMNWLDPSQHVG 591
Query: 121 VPKLEVLNLSYTNVDDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENCTQLRKISL 180
+ + LN + D EA I+ S L L + + T KG+N + + C L + L
Sbjct: 592 IVPDDYLNACPQDGDSEAA-AIANSMPHLEGLEIR-FSKLTAKGLNSICQGCPNLEFLDL 765
Query: 181 DGCHKVHANIVSSMVSSRPSLRQITAP 207
GC + + ++ SS L+ I P
Sbjct: 766 SGCANLTSRDIAKASSSLSHLKDIKKP 846
>TC79219 similar to GP|15810000|gb|AAL06927.1 AT5g23340/MKD15_20
{Arabidopsis thaliana}, partial (78%)
Length = 1619
Score = 41.6 bits (96), Expect = 3e-04
Identities = 23/74 (31%), Positives = 37/74 (49%), Gaps = 1/74 (1%)
Frame = +2
Query: 124 LEVLNLSYTN-VDDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENCTQLRKISLDG 182
L L++SY + D+ L ++K CC L L L C T + + +NC L ++ L G
Sbjct: 491 LHSLDVSYCRKLTDKGLSAVAKGCCDLRILHLTGCRFVTDSILEALSKNCRNLEELVLQG 670
Query: 183 CHKVHANIVSSMVS 196
C + N + S+ S
Sbjct: 671 CTSITDNGLMSLAS 712
>TC88537 weakly similar to GP|21536818|gb|AAM61150.1 F-box protein family
AtFBW2 {Arabidopsis thaliana}, partial (52%)
Length = 1395
Score = 38.1 bits (87), Expect = 0.003
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Frame = +1
Query: 56 LASLDLLSSNISDELLSSIATERLPLTRLVLQYCIGI----VQVLGICCNIRHLNLSKCS 111
L SL L SN+SD ++ IA + +T L + YCI I ++++G C + C
Sbjct: 607 LRSLRLPRSNMSDLVVEQIAGKFSVITFLDVSYCIKIGACAIEMIGKNCKLLE---GLCR 777
Query: 112 MVKLEMNFEVPKLEVLNLSYTNVDDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVEN 171
+ L+ + + D+ Y I+ + L L + + + GV ++ N
Sbjct: 778 -----------NMHPLDTAGKPLQDDEAYAIATTMPKLKHLEMAY-HRISTSGVVQILSN 921
Query: 172 CTQLRKISLDGCHKVHANIVSSMVSSRPSLR 202
C +L + L GC V+ + S S P L+
Sbjct: 922 CPKLEFLDLRGCWGVNLDENKSAKQSFPKLK 1014
>TC81941 similar to GP|15420162|gb|AAK97303.1 F-box containing protein ORE9
{Arabidopsis thaliana}, partial (35%)
Length = 1017
Score = 35.8 bits (81), Expect = 0.014
Identities = 25/97 (25%), Positives = 41/97 (41%), Gaps = 9/97 (9%)
Frame = +2
Query: 99 CCNIRHLNLSKCSMVKLEMNFEVPKLEVLNLSY---------TNVDDEALYMISKSCCGL 149
CC N+ + S ++F+ P L+V+ L + +D AL C GL
Sbjct: 2 CCK----NVXEXSFALEMLSFKCPNLKVVKLGQFQGICLAIGSRLDGIAL------CHGL 151
Query: 150 LKLSLENCNDFTKKGVNHVVENCTQLRKISLDGCHKV 186
LS+ C D G+ + C++L + + GC V
Sbjct: 152 QSLSVNTCGDLDDMGLIEIGRGCSRLVRFEIQGCKLV 262
>TC86245 weakly similar to GP|9279671|dbj|BAB01228.1 transport inhibitor
response-like protein {Arabidopsis thaliana}, partial
(80%)
Length = 2260
Score = 35.8 bits (81), Expect = 0.014
Identities = 26/82 (31%), Positives = 38/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 122 PKLEVLNLSYTNVDDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENCTQLRKISL- 180
P LE L L V DE+L ++ S LSL +C+ F+ G+ V NC L ++ +
Sbjct: 804 PFLEELRLKRMAVSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCKNLTELDIQ 983
Query: 181 -DGCHKVHANIVSSMVSSRPSL 201
+G N +S S SL
Sbjct: 984 ENGVDDKSGNWLSCFPESFTSL 1049
>BG449485 weakly similar to GP|22136448|gb unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 583
Score = 34.7 bits (78), Expect = 0.031
Identities = 33/127 (25%), Positives = 51/127 (39%), Gaps = 15/127 (11%)
Frame = +1
Query: 58 SLDLLSSNISDELLSSIATERLPLTRLVLQYCIGIVQV---------------LGICCNI 102
SLD L S ++D LL + T RL L+ + + +V LG ++
Sbjct: 136 SLDCLPSPLADALLRRLITRRLLHPSLLEIFKNSVEEVDLRGENSVDAEWMAYLGAFRHL 315
Query: 103 RHLNLSKCSMVKLEMNFEVPKLEVLNLSYTNVDDEALYMISKSCCGLLKLSLENCNDFTK 162
R+LNLS+C ++ AL+ IS L L L C+ F
Sbjct: 316 RYLNLSECH---------------------RINSSALWPIS-GMNSLKDLDLSRCSKFND 429
Query: 163 KGVNHVV 169
G+NH++
Sbjct: 430 AGINHIL 450
>TC86244 weakly similar to PIR|T48087|T48087 transport inhibitor response
protein TIR1 [imported] - Arabidopsis thaliana, partial
(48%)
Length = 2369
Score = 34.3 bits (77), Expect = 0.041
Identities = 20/59 (33%), Positives = 29/59 (48%)
Frame = +1
Query: 122 PKLEVLNLSYTNVDDEALYMISKSCCGLLKLSLENCNDFTKKGVNHVVENCTQLRKISL 180
P LE L L V DE+L ++ S LSL +C F+ G+ V NC L ++ +
Sbjct: 532 PFLEELRLKRMVVTDESLEFLAFSFHNFKALSLLSCEGFSTDGLAAVAANCKNLTELDI 708
>TC79177
Length = 1704
Score = 34.3 bits (77), Expect = 0.041
Identities = 20/69 (28%), Positives = 36/69 (51%), Gaps = 1/69 (1%)
Frame = +2
Query: 134 VDDEALYMISKSCCGLLK-LSLENCNDFTKKGVNHVVENCTQLRKISLDGCHKVHANIVS 192
+ D+ L ++ GLL+ LSL C T G+ V+E +L K+S+ GC ++ +
Sbjct: 491 ITDDILLELTNRAQGLLQCLSLVECTRITDDGLRRVLEVNPKLSKLSVPGCTRLSIEGIV 670
Query: 193 SMVSSRPSL 201
M+ + S+
Sbjct: 671 GMLKAYNSM 697
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.323 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,247,620
Number of Sequences: 36976
Number of extensions: 116205
Number of successful extensions: 956
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of query: 230
length of database: 9,014,727
effective HSP length: 93
effective length of query: 137
effective length of database: 5,575,959
effective search space: 763906383
effective search space used: 763906383
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 57 (26.6 bits)
Medicago: description of AC148483.19