BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148404.8 - phase: 0
(416 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF645233 similar to PIR|T03762|T03 myb-related transcription fac... 385 e-107
TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD460... 153 1e-37
BG448527 similar to PIR|T51509|T51 probable transcription factor... 153 1e-37
TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine ... 152 2e-37
TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine ... 149 1e-36
BF644787 similar to GP|11994692|db MYB-like DNA-binding domain p... 146 1e-35
TC84780 homologue to PIR|F85021|F85021 probable transcription fa... 146 1e-35
TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [im... 145 2e-35
TC78267 weakly similar to PIR|B85064|B85064 MYB-like protein [im... 145 2e-35
TC80618 homologue to PIR|T06455|T06455 Myb26 protein - garden pe... 145 3e-35
TC78266 similar to GP|22266673|dbj|BAC07543. myb-related transcr... 144 5e-35
TC81202 homologue to GP|17380966|gb|AAL36295.1 putative transcri... 143 1e-34
TC82254 similar to GP|22266673|dbj|BAC07543. myb-related transcr... 143 1e-34
TC90951 homologue to PIR|T06455|T06455 Myb26 protein - garden pe... 143 1e-34
BQ147546 similar to PIR|H96706|H96 probable transcription factor... 143 1e-34
BI311137 similar to GP|17380966|gb putative transcription factor... 143 1e-34
TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcript... 141 5e-34
TC89016 similar to GP|19073328|gb|AAL84762.1 typical P-type R2R3... 141 5e-34
BG644406 homologue to PIR|T07398|T07 myb-related transcription f... 141 5e-34
BF643814 similar to GP|19386839|db putative myb-related protein ... 140 7e-34
>BF645233 similar to PIR|T03762|T03 myb-related transcription factor - rice,
partial (20%)
Length = 643
Score = 385 bits (989), Expect(2) = e-107
Identities = 184/188 (97%), Positives = 184/188 (97%)
Frame = +1
Query: 1 MSSTSSEHYGDHKTHILRVMNSALSEDDGDHKTGILSGMSSPSSGDDDRKRQSILSADQE 60
MSSTSSEHYGDHKTHILRVMNSALSEDDGDHKTGILSGMSSPSSGDDDRKRQSILSADQE
Sbjct: 70 MSSTSSEHYGDHKTHILRVMNSALSEDDGDHKTGILSGMSSPSSGDDDRKRQSILSADQE 249
Query: 61 TDEGDTTGGEGGEGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLR 120
TDEGDTTGGEGGEGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLR
Sbjct: 250 TDEGDTTGGEGGEGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLR 429
Query: 121 WANHLRPDLRKGAITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRG 180
WANHLRPDLRKGAITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRG
Sbjct: 430 WANHLRPDLRKGAITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRG 609
Query: 181 RANLPIYP 188
RAN P
Sbjct: 610 RANXTNLP 633
Score = 21.6 bits (44), Expect(2) = e-107
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 184 LPIYPEDL 191
LPIYPEDL
Sbjct: 620 LPIYPEDL 643
>TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD46010.1
[imported] - Arabidopsis thaliana, partial (39%)
Length = 1259
Score = 153 bits (387), Expect = 1e-37
Identities = 65/107 (60%), Positives = 83/107 (76%)
Frame = +2
Query: 73 EGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKG 132
E GLKKGPWT ED+ LV H+Q++G G+W ++ K GL RCGKSCRLRW N+LRPD+++G
Sbjct: 80 ESGLKKGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRG 259
Query: 133 AITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKR 179
+ EEE+ I+ LH +GNKW+ +A LPGRTDNEIKNFWNT KK+
Sbjct: 260 KFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKK 400
>BG448527 similar to PIR|T51509|T51 probable transcription factor (MYB9) -
Arabidopsis thaliana, partial (40%)
Length = 633
Score = 153 bits (386), Expect = 1e-37
Identities = 66/107 (61%), Positives = 84/107 (77%)
Frame = +1
Query: 73 EGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKG 132
E G+KKGPWT EDE L+ ++ K+G GNW ++ K GL RCGKSCRLRW N+LRPD+++G
Sbjct: 64 EIGVKKGPWTQEEDEKLIDYINKHGHGNWGTLSKRAGLNRCGKSCRLRWTNYLRPDIKRG 243
Query: 133 AITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKR 179
T EEER II LH +GNKW+++AA LPGRTDNEIKN+WNT +K+
Sbjct: 244 KFTDEEERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKK 384
>TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine max},
partial (85%)
Length = 1389
Score = 152 bits (385), Expect = 2e-37
Identities = 71/147 (48%), Positives = 95/147 (64%), Gaps = 11/147 (7%)
Frame = +2
Query: 75 GLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAI 134
GLK+GPW+ EDEIL +++QK+G GNW ++ K GL RCGKSCRLRW N+LRPD+++G
Sbjct: 137 GLKRGPWSLEEDEILTSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNF 316
Query: 135 TAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFW-----------NTRCKKRGRAN 183
T EEE II+LH +GN+W+ +AA LPGRTDNEIKN W N+ KK+ +
Sbjct: 317 TNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLNQTNSEAKKKAISK 496
Query: 184 LPIYPEDLSSECLLNQENADMLTNEAS 210
I D +S + E+A T +S
Sbjct: 497 PKIKRSDSNSSTITQSESASACTTSSS 577
>TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine max},
partial (78%)
Length = 1156
Score = 149 bits (377), Expect = 1e-36
Identities = 73/160 (45%), Positives = 97/160 (60%), Gaps = 15/160 (9%)
Frame = +3
Query: 75 GLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAI 134
GLKKGPWT EDEIL +++ K+G NW ++ K GL RCGKSCRLRW N+L+PD+++G
Sbjct: 96 GLKKGPWTLEEDEILTSYINKHGHSNWRALPKHAGLLRCGKSCRLRWINYLKPDIKRGNF 275
Query: 135 TAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKR---GRANLP------ 185
T EEE II++H +GN+W+ +AA LPGRTDNEIKN W+T KKR N P
Sbjct: 276 TNEEEETIIKMHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLNTNNNQPNSNTKK 455
Query: 186 ------IYPEDLSSECLLNQENADMLTNEASQHDEAENKV 219
I D +S L N ++ +SQ +N +
Sbjct: 456 RVSKQKIKRSDSNSSTLTTASNCTFSSDFSSQEKNLDNSI 575
>BF644787 similar to GP|11994692|db MYB-like DNA-binding domain protein
{Arabidopsis thaliana}, partial (53%)
Length = 682
Score = 146 bits (369), Expect = 1e-35
Identities = 63/105 (60%), Positives = 82/105 (78%)
Frame = +3
Query: 77 KKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAITA 136
+KGPWTA ED +L+ +V+ +GEG WNSV + TGL R GKSCRLRW N+LRPDL++G IT
Sbjct: 231 RKGPWTAEEDRLLIDYVRLHGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRGQITP 410
Query: 137 EEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGR 181
+EE I+ELH + GN+W+ +A LPGRTDNEIKN+W T KK+ +
Sbjct: 411 QEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAK 545
>TC84780 homologue to PIR|F85021|F85021 probable transcription factor
[imported] - Arabidopsis thaliana, partial (39%)
Length = 971
Score = 146 bits (369), Expect = 1e-35
Identities = 81/189 (42%), Positives = 109/189 (56%), Gaps = 22/189 (11%)
Frame = +1
Query: 76 LKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAIT 135
L+KG W+ EDE L+ H+ KYG G W+SV K GL RCGKSCRLRW N+LRPDL++G +
Sbjct: 136 LRKGLWSPEEDEKLLNHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFS 315
Query: 136 AEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKK--RGRANLPIYPEDLSS 193
EEE IIELH +GN+W+Q+AA LPGRTDNEIKN WN+ KK R + P+ + LS
Sbjct: 316 QEEENLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSE 495
Query: 194 ECLLNQE----NADMLTNEASQHDEA----------------ENKVPEVIFKDYKLRPDI 233
+++E + T E S+ DE E K ++ K Y ++
Sbjct: 496 VENVDEEEGKTRSQEKTAEISESDELNIVRSESTSKSDAVSYEPKQSSIVLKGYATEMEV 675
Query: 234 LPPCFDKLL 242
C + L+
Sbjct: 676 EGSCSNYLM 702
>TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [imported] -
Arabidopsis thaliana, partial (35%)
Length = 888
Score = 145 bits (367), Expect = 2e-35
Identities = 66/130 (50%), Positives = 91/130 (69%), Gaps = 2/130 (1%)
Frame = +1
Query: 73 EGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKG 132
+ G++KG WTA ED L+A+V +YG NW + K GL+RCGKSCRLRW N+LRP++++G
Sbjct: 109 KSGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRG 288
Query: 133 AITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGRANLPIYPEDLS 192
T EEE II +H K+GN+W+ +AA LPGRTDNE+KN W+T KKR N+ E S
Sbjct: 289 NFTQEEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTNEETKS 468
Query: 193 SE--CLLNQE 200
++ C+ N +
Sbjct: 469 TQGRCVSNYQ 498
>TC78267 weakly similar to PIR|B85064|B85064 MYB-like protein [imported] -
Arabidopsis thaliana, partial (35%)
Length = 869
Score = 145 bits (367), Expect = 2e-35
Identities = 65/120 (54%), Positives = 86/120 (71%)
Frame = +2
Query: 75 GLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAI 134
G++KG WTA ED L+A+V +YG NW + K GL+RCGKSCRLRW N+LRP++R+G
Sbjct: 125 GMRKGTWTAEEDRKLIAYVTRYGFWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIRRGNF 304
Query: 135 TAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGRANLPIYPEDLSSE 194
T +EE II +H K+GNKW+ +AA LPGRTDNE+KN W+T KKR N+ E S++
Sbjct: 305 TKDEEELIIRMHKKLGNKWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTNEETKSTK 484
>TC80618 homologue to PIR|T06455|T06455 Myb26 protein - garden pea, partial
(57%)
Length = 799
Score = 145 bits (366), Expect = 3e-35
Identities = 66/126 (52%), Positives = 89/126 (70%)
Frame = +2
Query: 76 LKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAIT 135
++KGPWT ED IL+ ++ +GEG WNS+ K GL R GKSCRLRW N+LRPD+R+G IT
Sbjct: 89 VRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNIT 268
Query: 136 AEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGRANLPIYPEDLSSEC 195
EE+ IIELH K GN+W+++A LPGRTDNEIKN+W TR +K + ++ S+
Sbjct: 269 PEEQLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENSQSQEQGSDI 448
Query: 196 LLNQEN 201
+N +N
Sbjct: 449 QINDDN 466
>TC78266 similar to GP|22266673|dbj|BAC07543. myb-related transcription
factor VlMYBB1-1 {Vitis labrusca x Vitis vinifera},
partial (46%)
Length = 665
Score = 144 bits (364), Expect = 5e-35
Identities = 64/132 (48%), Positives = 92/132 (69%)
Frame = +1
Query: 73 EGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKG 132
+ G++KG WTA ED L+A+V +YG NW + K GL+RCGKSCRLRW N+LRP++++G
Sbjct: 112 KSGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRG 291
Query: 133 AITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGRANLPIYPEDLS 192
T EEE II +H +GN+W+ +AA LPGRTDNE+KN+W+T KKR N E+
Sbjct: 292 NFTQEEEELIIRMHKNLGNRWSTIAAELPGRTDNEVKNYWHTSLKKRVEHNQITNIEETK 471
Query: 193 SECLLNQENADM 204
S+ + + ++ D+
Sbjct: 472 SKDIESTQDRDI 507
>TC81202 homologue to GP|17380966|gb|AAL36295.1 putative transcription
factor {Arabidopsis thaliana}, partial (40%)
Length = 1506
Score = 143 bits (361), Expect = 1e-34
Identities = 65/106 (61%), Positives = 82/106 (77%)
Frame = +2
Query: 76 LKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAIT 135
L+KG W+ EDE L+ ++ K+G G W+SV K GL RCGKSCRLRW N+LRPDL++GA +
Sbjct: 92 LRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFS 271
Query: 136 AEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGR 181
+EE IIELH +GN+W+Q+AA LPGRTDNEIKN WN+ KKR R
Sbjct: 272 QQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLR 409
>TC82254 similar to GP|22266673|dbj|BAC07543. myb-related transcription
factor VlMYBB1-1 {Vitis labrusca x Vitis vinifera},
partial (46%)
Length = 754
Score = 143 bits (360), Expect = 1e-34
Identities = 61/106 (57%), Positives = 81/106 (75%)
Frame = +2
Query: 73 EGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKG 132
+ GL+KG WT ED+ L+A+V +YG NW + K GL RCGKSCRLRW N+LRPD+++G
Sbjct: 122 KNGLRKGTWTPEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWLNYLRPDIKRG 301
Query: 133 AITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKK 178
+ + EEE II+LH K+GN+W ++A LPGRTDNEIKN+W+T KK
Sbjct: 302 SFSHEEEETIIKLHEKLGNRWTMISANLPGRTDNEIKNYWHTTIKK 439
>TC90951 homologue to PIR|T06455|T06455 Myb26 protein - garden pea, partial
(83%)
Length = 661
Score = 143 bits (360), Expect = 1e-34
Identities = 63/103 (61%), Positives = 80/103 (77%)
Frame = +3
Query: 76 LKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAIT 135
++KGPWT ED IL+ ++ +GEG WNS+ K GL R GKSCRLRW N+LRPD+R+G IT
Sbjct: 102 VRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNIT 281
Query: 136 AEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKK 178
EE+ I+ELH K GN+W+++A LPGRTDNEIKNFW TR +K
Sbjct: 282 PEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQK 410
>BQ147546 similar to PIR|H96706|H96 probable transcription factor T22E19.5
[imported] - Arabidopsis thaliana, partial (48%)
Length = 690
Score = 143 bits (360), Expect = 1e-34
Identities = 59/114 (51%), Positives = 84/114 (72%)
Frame = +3
Query: 68 GGEGGEGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRP 127
G E L++GPWT ED +L+ ++ ++GEG WN + K GL R GKSCRLRW N+L+P
Sbjct: 138 GNSKEENELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKP 317
Query: 128 DLRKGAITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGR 181
D+++G +T +E+ I+ELH K GN+W+++A LPGRTDNEIKN+W TR +K+ R
Sbjct: 318 DIKRGNLTPQEQLLILELHSKXGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQAR 479
>BI311137 similar to GP|17380966|gb putative transcription factor
{Arabidopsis thaliana}, partial (35%)
Length = 761
Score = 143 bits (360), Expect = 1e-34
Identities = 63/104 (60%), Positives = 81/104 (77%)
Frame = +1
Query: 76 LKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAIT 135
L+KG W+ EDE L+ ++ K+G G W+SV K GL RCGKSCRLRW N+LRPDL++GA +
Sbjct: 181 LRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFS 360
Query: 136 AEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKR 179
+EE IIELH +GN+W+Q+AA LPGRTDNEIKN WN+ KK+
Sbjct: 361 EQEENSIIELHALLGNRWSQIAAQLPGRTDNEIKNLWNSSLKKK 492
>TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcription factor
{Arabidopsis thaliana}, partial (49%)
Length = 984
Score = 141 bits (355), Expect = 5e-34
Identities = 60/105 (57%), Positives = 80/105 (76%)
Frame = +1
Query: 75 GLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAI 134
G+KKGPWT ED ILV ++Q++G GNW +V TGL+RC KSCRLRW N+LRP +++G
Sbjct: 187 GVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNF 366
Query: 135 TAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKR 179
T +EE+ II L +GN+WA +A+ LP RTDN+IKN+WNT KK+
Sbjct: 367 TEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKK 501
>TC89016 similar to GP|19073328|gb|AAL84762.1 typical P-type R2R3 Myb
protein {Sorghum bicolor}, partial (81%)
Length = 1120
Score = 141 bits (355), Expect = 5e-34
Identities = 61/109 (55%), Positives = 83/109 (75%)
Frame = +2
Query: 73 EGGLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKG 132
E G++KGPWT ED ILV ++ +GEG+WN++ GL R GKSCRLRW N+LRPDLR+G
Sbjct: 170 ETGVRKGPWTLEEDTILVDYITIHGEGHWNTLASSAGLRRSGKSCRLRWLNYLRPDLRRG 349
Query: 133 AITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGR 181
IT +E+ I++LH + GN+W+++A LPGRTDNEIKN+W TR K+ +
Sbjct: 350 NITLQEQILILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVIKQAK 496
>BG644406 homologue to PIR|T07398|T07 myb-related transcription factor THM6 -
tomato, partial (42%)
Length = 762
Score = 141 bits (355), Expect = 5e-34
Identities = 61/105 (58%), Positives = 81/105 (77%)
Frame = +1
Query: 75 GLKKGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAI 134
G+KKGPWT ED +LV+ VQ++G GNW +V TGL RC KSCRLRW N+LRP +++G+
Sbjct: 175 GVKKGPWTPEEDIMLVSFVQEHGPGNWRTVPTHTGLRRCSKSCRLRWTNYLRPGIKRGSF 354
Query: 135 TAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKR 179
T +EE+ II+L +GNKWA +A+ LP RTDN+IKN+WNT KK+
Sbjct: 355 TDQEEKMIIQLQALLGNKWAAIASYLPERTDNDIKNYWNTHLKKK 489
>BF643814 similar to GP|19386839|db putative myb-related protein {Oryza
sativa (japonica cultivar-group)}, partial (49%)
Length = 545
Score = 140 bits (354), Expect = 7e-34
Identities = 61/102 (59%), Positives = 78/102 (75%)
Frame = +1
Query: 78 KGPWTAAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAITAE 137
KG W+ EDE L+ ++++ GEG W S+ K GLARCGKSCRLRW N+LRPDL++G T E
Sbjct: 28 KGAWSKEEDERLINYIKQQGEGCWRSLPKAAGLARCGKSCRLRWINYLRPDLKRGNFTHE 207
Query: 138 EERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKR 179
E+ II LH +GNKW+Q+A LPGRTDNEIKN+WNT K++
Sbjct: 208 EDELIISLHAMVGNKWSQIAQKLPGRTDNEIKNYWNTHIKRK 333
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.131 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,646,481
Number of Sequences: 36976
Number of extensions: 230859
Number of successful extensions: 1288
Number of sequences better than 10.0: 136
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of query: 416
length of database: 9,014,727
effective HSP length: 99
effective length of query: 317
effective length of database: 5,354,103
effective search space: 1697250651
effective search space used: 1697250651
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC148404.8