BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148404.5 - phase: 0
(192 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81461 214 2e-56
TC79718 205 1e-53
TC88572 weakly similar to GP|20145851|emb|CAD29616. auxin respon... 198 1e-51
TC81996 similar to GP|20145851|emb|CAD29616. auxin response fact... 189 7e-51
AW573956 similar to GP|20145851|emb auxin response factor 36 {Ar... 184 2e-47
TC89357 similar to GP|20145851|emb|CAD29616. auxin response fact... 184 2e-47
BG646843 similar to GP|20145851|emb auxin response factor 36 {Ar... 174 2e-44
BI312120 PIR|D84274|D84 coenzyme PQQ synthesis protein [imported... 153 5e-38
TC78901 similar to GP|21734794|gb|AAM76972.1 reduced vernalizati... 58 3e-09
TC76370 similar to GP|21734794|gb|AAM76972.1 reduced vernalizati... 55 2e-08
TC93851 weakly similar to GP|21734794|gb|AAM76972.1 reduced vern... 52 1e-07
CA990321 weakly similar to PIR|S03170|S03 homeotic protein cut -... 50 7e-07
TC79503 weakly similar to GP|21734794|gb|AAM76972.1 reduced vern... 49 9e-07
TC79504 weakly similar to GP|21734794|gb|AAM76972.1 reduced vern... 49 1e-06
BF003537 46 8e-06
TC85081 similar to GP|21240658|gb|AAM44369.1 putative protein co... 42 1e-04
BF632358 weakly similar to GP|19352296|gb MULTIPLE BANDED ANTIGE... 42 1e-04
AA660213 39 3e-04
BI271887 32 0.12
BQ137257 similar to GP|21536912|gb| unknown {Arabidopsis thalian... 29 1.3
>TC81461
Length = 745
Score = 214 bits (545), Expect = 2e-56
Identities = 108/154 (70%), Positives = 117/154 (75%), Gaps = 3/154 (1%)
Frame = +1
Query: 15 ALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFL 74
ALPKTFSDNL KKLPENVTLKGPSGV WNI LTT D VYF +GWQQF+NDHSLK +DFL
Sbjct: 235 ALPKTFSDNLKKKLPENVTLKGPSGVVWNIGLTTIDDTVYFTNGWQQFVNDHSLKESDFL 414
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNG 134
KYNGES FEVLIFDG SFCEK ASYFV KCGHAQT QGG A +TN S+EE+DT +
Sbjct: 415 FFKYNGESLFEVLIFDGRSFCEKAASYFVGKCGHAQTEQGGIKAKDTNKSVEEIDTAFDA 594
Query: 135 G---DSPEQFTDDAVPKTTAIQSPFIPTGKRTKR 165
G SPEQ DAV KTT + +P GKR KR
Sbjct: 595 GVESASPEQLMADAVTKTTPVAAPSQSIGKRIKR 696
>TC79718
Length = 1377
Score = 205 bits (521), Expect = 1e-53
Identities = 113/189 (59%), Positives = 121/189 (63%), Gaps = 13/189 (6%)
Frame = +2
Query: 15 ALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFL 74
ALPKTFSDNL KKLPENVTLKGPSGV WNI LTTRD VYFVDGWQQF+NDHSLK NDFL
Sbjct: 188 ALPKTFSDNLKKKLPENVTLKGPSGVVWNIGLTTRDNTVYFVDGWQQFVNDHSLKENDFL 367
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNG 134
V KYNGES FEVLIFDG SFCEK SYFV KCGHAQT QG S A + N S +S
Sbjct: 368 VFKYNGESLFEVLIFDGNSFCEKATSYFVGKCGHAQTEQGDSKAKDNNTSAFNAGVES-- 541
Query: 135 GDSPEQFTDDAVPKTTAIQSPFIPTGKR-------------TKRRRRSPKAAANWGARAH 181
SP+ D V KTT P T KR TK+R R PK+ +
Sbjct: 542 -ASPQ--VADVVAKTTPAAVPSQTTSKRTKKKPVIEVTPVQTKKRGRPPKSDDSGEKLLR 712
Query: 182 AWVTCNKQH 190
V CNK+H
Sbjct: 713 DLVACNKEH 739
>TC88572 weakly similar to GP|20145851|emb|CAD29616. auxin response factor
36 {Arabidopsis thaliana}, partial (21%)
Length = 1755
Score = 198 bits (503), Expect = 1e-51
Identities = 102/152 (67%), Positives = 111/152 (72%)
Frame = +2
Query: 15 ALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFL 74
ALPKTFSDNL KKLPENVTLKGPSGV WNI LTTRD VYFVDGW++F+ DHSLK NDFL
Sbjct: 605 ALPKTFSDNLKKKLPENVTLKGPSGVVWNIGLTTRDDIVYFVDGWKRFIKDHSLKQNDFL 784
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNG 134
V KYNG+S FEVLIFDG+SFCEK ASYFV KCG+AQ QGG A +TN S+
Sbjct: 785 VFKYNGKSLFEVLIFDGDSFCEKAASYFVGKCGNAQIEQGGRKAKDTNKSV--------- 937
Query: 135 GDSPEQFTDDAVPKTTAIQSPFIPTGKRTKRR 166
SPEQF DAVP T GKRTK+R
Sbjct: 938 --SPEQFLADAVPSQT--------NGKRTKKR 1003
Score = 177 bits (449), Expect = 2e-45
Identities = 86/120 (71%), Positives = 94/120 (77%)
Frame = +2
Query: 15 ALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFL 74
ALPKTFSDNL KLP NVTLKGPSGV W+I LTTRD +Y DGWQQF+ DHSLK NDFL
Sbjct: 134 ALPKTFSDNLKNKLPANVTLKGPSGVVWDIGLTTRDDTIYSTDGWQQFVKDHSLKQNDFL 313
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNG 134
V KYNGES FEVLIF GESFCEK ASYF+ + G A T Q G A +TN S+EEV+T SNG
Sbjct: 314 VFKYNGESLFEVLIFHGESFCEKAASYFILERGQAHTGQRGRKAKDTNTSVEEVNTPSNG 493
>TC81996 similar to GP|20145851|emb|CAD29616. auxin response factor 36
{Arabidopsis thaliana}, partial (15%)
Length = 700
Score = 189 bits (479), Expect(2) = 7e-51
Identities = 96/141 (68%), Positives = 102/141 (72%)
Frame = +3
Query: 15 ALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFL 74
ALPKTFSDNL KLPENVTLKGPSGV WNI LTTRD VYF DGWQ+F+ DHSLK NDFL
Sbjct: 144 ALPKTFSDNLKNKLPENVTLKGPSGVVWNIGLTTRDYTVYFTDGWQRFVKDHSLKENDFL 323
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNG 134
V KYNGES FEVLIFD ++FCEK SYFV KCGHAQT Q GS A N S +S
Sbjct: 324 VFKYNGESLFEVLIFDRDNFCEKATSYFVGKCGHAQTEQEGSKAKNNNTSAFNTGVES-- 497
Query: 135 GDSPEQFTDDAVPKTTAIQSP 155
SPEQ DAV KTT + P
Sbjct: 498 -ASPEQIMADAVTKTTPVAVP 557
Score = 28.5 bits (62), Expect(2) = 7e-51
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = +1
Query: 147 PKTTAIQSPFIP----TGKRTKRRRRSPKAAANWGARAHAWVTCNKQ 189
PK T+ ++ P T +TK+R R PK+A ++ R+H V CNK+
Sbjct: 559 PKKTSKRTKKKPVIEVTPVQTKKRGRPPKSANSF-ERSHDLVVCNKE 696
>AW573956 similar to GP|20145851|emb auxin response factor 36 {Arabidopsis
thaliana}, partial (15%)
Length = 555
Score = 184 bits (467), Expect = 2e-47
Identities = 86/116 (74%), Positives = 95/116 (81%)
Frame = +2
Query: 15 ALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFL 74
ALPKTFSDNL KKLPENVTLKGPSG W+I LTTRD VYFV GW++F+ DHSLK NDFL
Sbjct: 206 ALPKTFSDNLKKKLPENVTLKGPSGAVWDIGLTTRDNTVYFVGGWERFVKDHSLKENDFL 385
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDT 130
V KYNGES FEVLIFDG++FCEK SYFV KCGHAQT +GGS TN S+ EV+T
Sbjct: 386 VFKYNGESLFEVLIFDGDNFCEKATSYFVRKCGHAQTEEGGSKVKNTNTSVGEVNT 553
>TC89357 similar to GP|20145851|emb|CAD29616. auxin response factor 36
{Arabidopsis thaliana}, partial (21%)
Length = 843
Score = 184 bits (467), Expect = 2e-47
Identities = 96/156 (61%), Positives = 111/156 (70%), Gaps = 7/156 (4%)
Frame = +3
Query: 15 ALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFL 74
ALPKTFS+N+ KKLPENV LKGP GVTWNI LT+RDG YF GW+QF+ DHSLK NDFL
Sbjct: 264 ALPKTFSNNVKKKLPENVVLKGPGGVTWNIGLTSRDGTFYFTQGWEQFVKDHSLKENDFL 443
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGH----AQTAQGG---SNASETNNSIEE 127
KYNGES FEVLIFDG+SFCEK A+YFV KCGH AQT QGG S ETNNS++E
Sbjct: 444 FFKYNGESLFEVLIFDGKSFCEKAAAYFVRKCGHAEAAAQTEQGGGCSSKGRETNNSVDE 623
Query: 128 VDTDSNGGDSPEQFTDDAVPKTTAIQSPFIPTGKRT 163
V+T SNG D E + + +I+ PF + T
Sbjct: 624 VNTPSNGVD--EGVSHEKSLHLNSIRVPFAVPSETT 725
>BG646843 similar to GP|20145851|emb auxin response factor 36 {Arabidopsis
thaliana}, partial (5%)
Length = 758
Score = 174 bits (440), Expect = 2e-44
Identities = 83/118 (70%), Positives = 92/118 (77%)
Frame = +3
Query: 15 ALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFL 74
ALPKTFSDNL KKLP NVTLKGPSGV WN+ LT RD +YF +GWQ+F+ DHSLK NDFL
Sbjct: 228 ALPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFL 407
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDS 132
V KYNGES FEVLIF G+SFCEK ASYFV KCG A T Q + +NNS+EEV T S
Sbjct: 408 VFKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQVCNKGKSSNNSVEEVSTPS 581
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 15 ALPKTFSDNLNKKLPENVTL 34
ALPKTFSD+LNKKLPENVTL
Sbjct: 698 ALPKTFSDHLNKKLPENVTL 757
>BI312120 PIR|D84274|D84 coenzyme PQQ synthesis protein [imported] -
Halobacterium sp. NRC-1, partial (3%)
Length = 550
Score = 153 bits (386), Expect = 5e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +1
Query: 121 TNNSIEEVDTDSNGGDSPEQFTDDAVPKTTAIQSPFIPTGKRTKRRRRSPKAAANWGARA 180
TNNSIEEVDTDSNGGDSPEQFTDDAVPKTTAIQSPFIPTGKRTKRRRRSPKAAANWGARA
Sbjct: 1 TNNSIEEVDTDSNGGDSPEQFTDDAVPKTTAIQSPFIPTGKRTKRRRRSPKAAANWGARA 180
Query: 181 HAWVTCNKQHP 191
HAWVTCNKQHP
Sbjct: 181 HAWVTCNKQHP 213
>TC78901 similar to GP|21734794|gb|AAM76972.1 reduced vernalization response
1 {Arabidopsis thaliana}, partial (37%)
Length = 1760
Score = 57.8 bits (138), Expect = 3e-09
Identities = 27/74 (36%), Positives = 38/74 (50%)
Frame = +2
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
LP F + VTL P G W + + D +F+DGW +F+ ++S+ LV
Sbjct: 269 LPDDFMRKYGGDISPTVTLTVPDGSVWRVIMKKVDNKFWFLDGWNEFVQNYSISTGYLLV 448
Query: 76 CKYNGESHFEVLIF 89
KY G+SHF V IF
Sbjct: 449 FKYEGKSHFTVNIF 490
>TC76370 similar to GP|21734794|gb|AAM76972.1 reduced vernalization response
1 {Arabidopsis thaliana}, partial (36%)
Length = 1840
Score = 54.7 bits (130), Expect = 2e-08
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +1
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F +L TL P G W + L D ++FVDGWQ F+ +++ FLV
Sbjct: 193 IPDNFLRKYGAQLSTIATLTVPDGTVWRLGLKKVDNRIWFVDGWQDFVQRYAIGIGYFLV 372
Query: 76 CKYNGESHFEVLIFD 90
Y G S+F V IF+
Sbjct: 373 FTYEGNSNFIVHIFN 417
>TC93851 weakly similar to GP|21734794|gb|AAM76972.1 reduced vernalization
response 1 {Arabidopsis thaliana}, partial (9%)
Length = 710
Score = 52.4 bits (124), Expect = 1e-07
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Frame = +1
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDG-WQQFMNDHSLKANDFL 74
+P+ F +L T+ P G W + L VYF + WQQF +SL+ FL
Sbjct: 277 IPENFITMFGNELENVATVTVPDGCDWEMDLKKCGEDVYFCNKEWQQFAEYYSLRYGCFL 456
Query: 75 VCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSI------EEV 128
+Y G S+F V+IFD S VE C +T S + ETN +V
Sbjct: 457 SFRYEGNSNFSVIIFDATS---------VEICYPLKTP---STSGETNTECPRPMKRSKV 600
Query: 129 DTDSNGGDSPEQFTDDAVPKTTAIQSPFIP 158
+T + G + ++ A + + F P
Sbjct: 601 ETSESPGKKVKSMSNYAYKRAEDAANAFNP 690
>CA990321 weakly similar to PIR|S03170|S03 homeotic protein cut - fruit fly
(Drosophila melanogaster), partial (2%)
Length = 451
Score = 49.7 bits (117), Expect = 7e-07
Identities = 30/114 (26%), Positives = 55/114 (47%)
Frame = +3
Query: 26 KKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLVCKYNGESHFE 85
+K+ ++ L+ G W+++ +YF GW+QF ++SL+ +DFLV + + F
Sbjct: 108 RKVIKDFILRDRRGRDWHVKARLIGDELYFDGGWKQFREENSLEEDDFLVFTHIENTVFR 287
Query: 86 VLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGGDSPE 139
I + S CEK+ VE+ NN++E+ + ++G D E
Sbjct: 288 FKILELSSMCEKKKVSVVEE----------------NNNMEDEEEVNDGDDDDE 401
>TC79503 weakly similar to GP|21734794|gb|AAM76972.1 reduced vernalization
response 1 {Arabidopsis thaliana}, partial (6%)
Length = 910
Score = 49.3 bits (116), Expect = 9e-07
Identities = 26/75 (34%), Positives = 37/75 (48%)
Frame = +3
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F +L TL P G W++RL D + FVDGWQ F+ +S+ FLV
Sbjct: 168 IPDNFLRKHGAQLSTITTLTVPDGTVWHLRLKKVDNQICFVDGWQDFVQRYSIGIG*FLV 347
Query: 76 CKYNGESHFEVLIFD 90
G +F V +F+
Sbjct: 348 FTCEGNLNFIVHMFN 392
>TC79504 weakly similar to GP|21734794|gb|AAM76972.1 reduced vernalization
response 1 {Arabidopsis thaliana}, partial (26%)
Length = 695
Score = 48.9 bits (115), Expect = 1e-06
Identities = 26/74 (35%), Positives = 35/74 (47%)
Frame = +1
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F +L TL P G W + L D + FVDGWQ F+ +S+ LV
Sbjct: 154 IPDNFLRKHGDQLSTVATLTIPGGSVWRLGLKKVDNSICFVDGWQDFVQRYSIGIGYLLV 333
Query: 76 CKYNGESHFEVLIF 89
Y G S+F + IF
Sbjct: 334 FIYEGRSNFIIHIF 375
>BF003537
Length = 397
Score = 46.2 bits (108), Expect = 8e-06
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 32 VTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLK 69
V+L GPSG TW +RL +D ++F GW F+ DH L+
Sbjct: 282 VSLTGPSGNTWQVRLVEQDNHLFFHHGWSTFVGDHHLQ 395
>TC85081 similar to GP|21240658|gb|AAM44369.1 putative protein contains
similarity to topoisomerase-related function protein,
partial (1%)
Length = 823
Score = 42.4 bits (98), Expect = 1e-04
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 31 NVTLKGPSGVTWNIRLTTRDGFVYFVD-GWQQFMNDHSLKANDFLVCKYNGESHFEVLIF 89
++ L SG W +++ + +Y + GWQ+F+ D+S+ +FLV Y GE+ F V I+
Sbjct: 219 SIILVCSSGEKWEVKILKKANDIYVRNFGWQKFLKDNSVGLEEFLVFTYIGENLFNVEIY 398
Query: 90 DGESFCEK 97
G++ EK
Sbjct: 399 -GKNGLEK 419
>BF632358 weakly similar to GP|19352296|gb MULTIPLE BANDED ANTIGEN
(FRAGMENT). 6/101 {Dictyostelium discoideum}, partial
(3%)
Length = 578
Score = 42.4 bits (98), Expect = 1e-04
Identities = 26/103 (25%), Positives = 45/103 (43%)
Frame = +2
Query: 42 WNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLVCKYNGESHFEVLIFDGESFCEKEASY 101
W ++ YF DGW++F ++ L NDFLV + + F+ I + S CEK
Sbjct: 221 WYVKARRIGDEFYFDDGWKKFRQENCLVENDFLVFTHIENNVFKFKILELSSMCEKMPVM 400
Query: 102 FVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGGDSPEQFTDD 144
E+ + + S+ + + D D+ G+ + DD
Sbjct: 401 EDEENNNMMEDEEEEKDSDDVDYDDNDDHDAEEGNDSDDDDDD 529
>AA660213
Length = 250
Score = 38.5 bits (88), Expect(2) = 3e-04
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 17 PKTFSDNLNKKLPENVTLK 35
PKTFSDNL KKLPENVT K
Sbjct: 147 PKTFSDNLKKKLPENVTXK 203
Score = 21.6 bits (44), Expect(2) = 3e-04
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 35 KGPSGVTWNI 44
KG SGV WNI
Sbjct: 200 KGXSGVVWNI 229
>BI271887
Length = 623
Score = 32.3 bits (72), Expect = 0.12
Identities = 13/71 (18%), Positives = 32/71 (44%)
Frame = +1
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
LP+ F + ++ TL P G + + + + +G + GW+ + + + ++
Sbjct: 277 LPRMFGSDFGDQIGRFATLTDPKGNQFEVLVDSINGDFFLTKGWKAIRDFYGISLGAWIT 456
Query: 76 CKYNGESHFEV 86
+ G HF++
Sbjct: 457 LIFVGVGHFDM 489
>BQ137257 similar to GP|21536912|gb| unknown {Arabidopsis thaliana}, partial
(15%)
Length = 1064
Score = 28.9 bits (63), Expect = 1.3
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 108 HAQTAQGGSNASETNNSIEEVDTDSNGGDSPEQFTDDAVPKTTAIQSPFIPTGKRTKRRR 167
HA A+ G ET +S T+ GG+ PEQ +D + A + G R R+
Sbjct: 499 HATPAERGE---ETRDSTARTATERGGGERPEQRSDRDERRRMATRQTARGAGHRRDRQA 669
Query: 168 R 168
R
Sbjct: 670 R 672
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,761,993
Number of Sequences: 36976
Number of extensions: 90598
Number of successful extensions: 518
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of query: 192
length of database: 9,014,727
effective HSP length: 91
effective length of query: 101
effective length of database: 5,649,911
effective search space: 570641011
effective search space used: 570641011
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Medicago: description of AC148404.5