TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148349.9 - phase: 0 
         (149 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC87021 similar to GP|6513924|gb|AAF14828.1| putative 40S riboso...   299  2e-82
TC76854 similar to GP|9759463|dbj|BAB10379.1 40S ribosomal prote...   269  4e-73
AL376044 similar to GP|18656155|db ryanodine receptor {Hemicentr...    31  0.21
BQ135457                                                               29  0.62
TC78922 similar to GP|4107276|emb|CAA67130.1 acetyl-CoA syntheta...    27  2.4
CA991311 weakly similar to SP|O81973|C933 Cytochrome P450 93A3 (...    27  3.1

>TC87021 similar to GP|6513924|gb|AAF14828.1| putative 40S ribosomal protein
           S19 {Arabidopsis thaliana}, complete
          Length = 742

 Score =  299 bits (766), Expect = 2e-82
 Identities = 149/149 (100%), Positives = 149/149 (100%)
 Frame = +3

Query: 1   MASSKTVKDVSPREFVNAYSAHLKRSGKLELPEWTDLVKTAKFKELAPYDPDWYYVRAAS 60
           MASSKTVKDVSPREFVNAYSAHLKRSGKLELPEWTDLVKTAKFKELAPYDPDWYYVRAAS
Sbjct: 72  MASSKTVKDVSPREFVNAYSAHLKRSGKLELPEWTDLVKTAKFKELAPYDPDWYYVRAAS 251

Query: 61  MARKIYVRGGLGVGSFQRIYGGSQRNGSRPPHFCKSSGAIARHILQQLENMNLIEMDTKG 120
           MARKIYVRGGLGVGSFQRIYGGSQRNGSRPPHFCKSSGAIARHILQQLENMNLIEMDTKG
Sbjct: 252 MARKIYVRGGLGVGSFQRIYGGSQRNGSRPPHFCKSSGAIARHILQQLENMNLIEMDTKG 431

Query: 121 GRKITSSGRRDLDQVAGRILVAP*FVSKS 149
           GRKITSSGRRDLDQVAGRILVAP*FVSKS
Sbjct: 432 GRKITSSGRRDLDQVAGRILVAP*FVSKS 518


>TC76854 similar to GP|9759463|dbj|BAB10379.1 40S ribosomal protein S19
           {Arabidopsis thaliana}, partial (97%)
          Length = 852

 Score =  269 bits (687), Expect = 4e-73
 Identities = 128/147 (87%), Positives = 143/147 (97%)
 Frame = +3

Query: 1   MASSKTVKDVSPREFVNAYSAHLKRSGKLELPEWTDLVKTAKFKELAPYDPDWYYVRAAS 60
           MA+++TV+DVS  EFV AYSAHLKRSGK+ELPEWTD+VKTA+FKELAPYDPDWYYVRAAS
Sbjct: 66  MATARTVQDVSSHEFVKAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAAS 245

Query: 61  MARKIYVRGGLGVGSFQRIYGGSQRNGSRPPHFCKSSGAIARHILQQLENMNLIEMDTKG 120
           +ARKIY+RGGLGVG+FQRIYGGSQRNGSRPPHFCKSSG+IARHILQQL+NMNLIEMDTKG
Sbjct: 246 IARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNLIEMDTKG 425

Query: 121 GRKITSSGRRDLDQVAGRILVAP*FVS 147
           GRKITSSGRRDLDQVAGRI++AP* V+
Sbjct: 426 GRKITSSGRRDLDQVAGRIVIAP*SVN 506


>AL376044 similar to GP|18656155|db ryanodine receptor {Hemicentrotus
           pulcherrimus}, partial (0%)
          Length = 525

 Score = 30.8 bits (68), Expect = 0.21
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 51  PDWYYVRAASMARKIYVRGGLGVGSFQRIYGGSQRNGSRPPH 92
           P WYY + AS+ R  +  GG      +   GG+   G +P H
Sbjct: 238 PGWYYTKVASLTRVFFF*GG------KPHQGGNNHQGGKPNH 345


>BQ135457 
          Length = 833

 Score = 29.3 bits (64), Expect = 0.62
 Identities = 15/51 (29%), Positives = 23/51 (44%)
 Frame = +2

Query: 6   TVKDVSPREFVNAYSAHLKRSGKLELPEWTDLVKTAKFKELAPYDPDWYYV 56
           +VKD+    F   YSAH  R GK+       ++    +  L  Y   +YY+
Sbjct: 134 SVKDIVKILFYKIYSAHGMRLGKIRTEPKNGILSMIAYGHLIVYATPFYYI 286


>TC78922 similar to GP|4107276|emb|CAA67130.1 acetyl-CoA synthetase {Solanum
           tuberosum}, partial (84%)
          Length = 1788

 Score = 27.3 bits (59), Expect = 2.4
 Identities = 12/27 (44%), Positives = 13/27 (47%)
 Frame = +2

Query: 76  FQRIYGGSQRNGSRPPHFCKSSGAIAR 102
           F   YG S  N    PH+C S G I R
Sbjct: 71  FAHAYGASYHNACLCPHWCCSFGCICR 151


>CA991311 weakly similar to SP|O81973|C933 Cytochrome P450 93A3 (EC 1.14.-.-)
           (P450 CP5). [Soybean] {Glycine max}, partial (33%)
          Length = 768

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 22  HLKRSGKLELPEWTDLVKTAKFKEL 46
           ++K+   L LP+WT L+K++  K+L
Sbjct: 212 NIKKPQSLLLPQWTKLIKSSSTKKL 138


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.137    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,851,628
Number of Sequences: 36976
Number of extensions: 44361
Number of successful extensions: 186
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of query: 149
length of database: 9,014,727
effective HSP length: 87
effective length of query: 62
effective length of database: 5,797,815
effective search space: 359464530
effective search space used: 359464530
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)