BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148342.16 - phase: 0 /pseudo
(138 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC76347 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, pa... 117 2e-27
BG452313 homologue to PIR|T40261|T40 ubi4 protein - fission yeas... 115 7e-27
TC76314 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, pa... 114 1e-26
TC85479 PIR|S20925|S20925 polyubiquitin - maize, complete 114 1e-26
TC85427 chitinase 114 1e-26
TC76489 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, pa... 114 1e-26
TC76338 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, pa... 114 1e-26
TC76373 GP|15450587|gb|AAK96565.1 AT4g05050/T32N4_13 {Arabidopsi... 114 1e-26
TC85480 GP|170352|gb|AAA34123.1|| hexameric polyubiquitin {Nicot... 114 1e-26
TC76388 homologue to PIR|S17435|S17435 polyubiquitin 6 - common ... 114 1e-26
TC76349 GP|1332579|emb|CAA66667.1 polyubiquitin {Pinus sylvestri... 114 1e-26
TC85481 homologue to PIR|S17435|S17435 polyubiquitin 6 - common ... 114 1e-26
TC76332 GP|15450587|gb|AAK96565.1 AT4g05050/T32N4_13 {Arabidopsi... 114 1e-26
TC76317 PIR|S06921|UQPM polyubiquitin 5 - garden pea, complete 114 1e-26
BG580602 PIR|S17435|S1 polyubiquitin 6 - common sunflower, parti... 114 1e-26
TC76476 PIR|S06921|UQPM polyubiquitin 5 - garden pea, partial (80%) 114 1e-26
TC76353 PIR|S06921|UQPM polyubiquitin 5 - garden pea, partial (89%) 114 1e-26
TC76405 homologue to GP|6118549|gb|AAF04147.1| ubiquitin precurs... 88 7e-25
TC76443 GP|15450587|gb|AAK96565.1 AT4g05050/T32N4_13 {Arabidopsi... 105 8e-24
TC86564 PIR|C86439|C86439 protein T19E23.13 [imported] - Arabido... 102 6e-23
>TC76347 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, partial (89%)
Length = 1421
Score = 117 bits (292), Expect = 2e-27
Identities = 72/151 (47%), Positives = 91/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++DR+TLA+Y
Sbjct: 194 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDRRTLADY 370
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 371 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 550
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 551 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 643
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 878 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 1054
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 1055 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1234
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1235 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1327
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 650 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 826
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 827 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1006
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1007IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1099
>BG452313 homologue to PIR|T40261|T40 ubi4 protein - fission yeast
(Schizosaccharomyces pombe), partial (51%)
Length = 658
Score = 115 bits (287), Expect = 7e-27
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 66 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 242
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 243 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 422
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 423 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 515
Score = 90.5 bits (223), Expect = 2e-19
Identities = 57/122 (46%), Positives = 71/122 (57%), Gaps = 16/122 (13%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 294 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 470
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQ L
Sbjct: 471 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQXL 650
Query: 105 FF 106
F
Sbjct: 651 IF 656
>TC76314 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, partial (66%)
Length = 978
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 519 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 695
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 696 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 875
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 876 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 968
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 63 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 239
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 240 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 419
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 420 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 512
>TC85479 PIR|S20925|S20925 polyubiquitin - maize, complete
Length = 1983
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 533 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 709
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 710 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 889
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 890 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 982
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 761 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 937
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 938 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1117
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1118IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1210
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 1217 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 1393
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 1394 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1573
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1574 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1666
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 77 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 253
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 254 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 433
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 434 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 526
>TC85427 chitinase
Length = 1090
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 498 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 674
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 675 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 854
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 855 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 947
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 270 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 446
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 447 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 626
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 627 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 719
>TC76489 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, partial (54%)
Length = 805
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 221 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 397
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 398 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 577
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 578 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 670
Score = 50.8 bits (120), Expect = 2e-07
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGK 49
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL K
Sbjct: 36 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIITSK 179
Score = 34.3 bits (77), Expect = 0.016
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3
Query: 82 NTILDVKKKIHDKEGIPVHQQRLFFDGK 109
+TI +VK KI DKEGIP QQRL K
Sbjct: 96 DTIDNVKAKIQDKEGIPPDQQRLIITSK 179
Score = 33.5 bits (75), Expect = 0.028
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 18 VKSSDTILDVKKKIHDKEGIP 38
V+SSDTI +VK KI DKEGIP
Sbjct: 727 VESSDTIDNVKAKIQDKEGIP 789
Score = 26.6 bits (57), Expect = 3.4
Identities = 12/17 (70%), Positives = 14/17 (81%)
Frame = +1
Query: 82 NTILDVKKKIHDKEGIP 98
+TI +VK KI DKEGIP
Sbjct: 739 DTIDNVKAKIQDKEGIP 789
>TC76338 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, partial (80%)
Length = 1172
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 515 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 691
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 692 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 871
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 872 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 964
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 59 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 235
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 236 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 415
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 416 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 508
Score = 87.4 bits (215), Expect = 2e-18
Identities = 55/120 (45%), Positives = 71/120 (58%), Gaps = 16/120 (13%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 743 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 919
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQ++
Sbjct: 920 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQKV 1099
>TC76373 GP|15450587|gb|AAK96565.1 AT4g05050/T32N4_13 {Arabidopsis
thaliana}, partial (81%)
Length = 808
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 103 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 279
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 280 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 459
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 460 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 552
>TC85480 GP|170352|gb|AAA34123.1|| hexameric polyubiquitin {Nicotiana
sylvestris}, complete
Length = 1695
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 525 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 701
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 702 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 881
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 882 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 974
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 753 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 929
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 930 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1109
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1110IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1202
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 981 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 1157
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 1158 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1337
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1338 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1430
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 69 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 245
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 246 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 425
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 426 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 518
>TC76388 homologue to PIR|S17435|S17435 polyubiquitin 6 - common sunflower,
partial (47%)
Length = 757
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 97 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 273
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 274 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 453
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 454 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 546
Score = 107 bits (266), Expect = 2e-24
Identities = 66/145 (45%), Positives = 86/145 (58%), Gaps = 16/145 (11%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 325 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 501
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP +QQ+L
Sbjct: 502 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPNQQKL 681
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLT 129
F GK + +TL +YNI + LT
Sbjct: 682 IFAGKXLXXGRTLADYNIXKESTLT 756
>TC76349 GP|1332579|emb|CAA66667.1 polyubiquitin {Pinus sylvestris}, partial
(70%)
Length = 2040
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 658 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 834
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 835 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1014
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1015IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1107
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 886 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 1062
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 1063 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1242
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1243 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1335
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 1342 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 1518
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 1519 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1698
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1699 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1791
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 202 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 378
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 379 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 558
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 559 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 651
>TC85481 homologue to PIR|S17435|S17435 polyubiquitin 6 - common sunflower,
partial (41%)
Length = 620
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 59 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 235
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 236 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 415
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 416 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 508
>TC76332 GP|15450587|gb|AAK96565.1 AT4g05050/T32N4_13 {Arabidopsis
thaliana}, complete
Length = 963
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 264 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 440
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 441 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 620
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 621 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 713
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 36 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 212
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 213 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 392
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 393 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 485
>TC76317 PIR|S06921|UQPM polyubiquitin 5 - garden pea, complete
Length = 1375
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 277 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 453
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 454 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 633
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 634 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 726
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 505 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 681
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 682 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 861
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 862 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 954
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 733 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 909
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 910 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 1089
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 1090IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1182
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 49 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 225
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 226 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 405
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 406 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 498
>BG580602 PIR|S17435|S1 polyubiquitin 6 - common sunflower, partial (47%)
Length = 657
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 143 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 319
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 320 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 592
Score = 90.1 bits (222), Expect = 3e-19
Identities = 54/121 (44%), Positives = 69/121 (56%), Gaps = 16/121 (13%)
Frame = +2
Query: 31 IHDKEGIPVHQQRLFFDGKPIKDRQTLANYNIPENSTIDTRSIAKRSRPLF--------- 81
I DKEGIP QQRL F GK ++D +TLA+YNI + ST+ + +F
Sbjct: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
Query: 82 -------NTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLTNYNIPRTQPLTLVRSL 134
+TI +VK KI DKEGIP QQRL F GK ++D +TL +YNI + L LV L
Sbjct: 182 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 361
Query: 135 R 135
R
Sbjct: 362 R 364
>TC76476 PIR|S06921|UQPM polyubiquitin 5 - garden pea, partial (80%)
Length = 1208
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 112 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 288
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 289 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 468
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 469 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 561
Score = 83.6 bits (205), Expect = 2e-17
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 16/114 (14%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 340 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 516
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIP 98
NI + ST+ + +F +TI +VK KI DKEGIP
Sbjct: 517 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 678
Score = 80.5 bits (197), Expect = 2e-16
Identities = 49/116 (42%), Positives = 64/116 (54%), Gaps = 16/116 (13%)
Frame = +3
Query: 36 GIPVHQQRLFFDGKPIKDRQTLANYNIPENSTIDTRSIAKRSRPLF-------------- 81
G P QQRL F GK ++D +TLA+YNI + ST+ + +F
Sbjct: 669 GYPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 848
Query: 82 --NTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
+TI +VK KI DKEGIP QQRL F GK ++D +TL +YNI + L LV LR
Sbjct: 849 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1016
Score = 73.9 bits (180), Expect = 2e-14
Identities = 40/68 (58%), Positives = 50/68 (72%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 795 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 971
Query: 61 NIPENSTI 68
NI + ST+
Sbjct: 972 NIQKESTL 995
>TC76353 PIR|S06921|UQPM polyubiquitin 5 - garden pea, partial (89%)
Length = 1246
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 567 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 743
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 744 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 923
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 924 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 1016
Score = 114 bits (285), Expect = 1e-26
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 111 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 287
Query: 61 NIPENSTIDTRSIAKRSRPLF----------------NTILDVKKKIHDKEGIPVHQQRL 104
NI + ST+ + +F +TI +VK KI DKEGIP QQRL
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 467
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
F GK ++D +TL +YNI + L LV LR
Sbjct: 468 IFAGKQLEDGRTLADYNIQKESTLHLVLRLR 560
Score = 75.1 bits (183), Expect = 8e-15
Identities = 46/110 (41%), Positives = 61/110 (54%), Gaps = 16/110 (14%)
Frame = +3
Query: 42 QRLFFDGKPIKDRQTLANYNIPENSTIDTRSIAKRSRPLF----------------NTIL 85
QRL F GK ++D +TLA+YNI + ST+ + +F +TI
Sbjct: 3 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 182
Query: 86 DVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
+VK KI DKEGIP QQRL F GK ++D +TL +YNI + L LV LR
Sbjct: 183 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 332
>TC76405 homologue to GP|6118549|gb|AAF04147.1| ubiquitin precursor {Hevea
brasiliensis}, partial (55%)
Length = 694
Score = 87.8 bits (216), Expect = 1e-18
Identities = 55/119 (46%), Positives = 71/119 (59%), Gaps = 16/119 (13%)
Frame = +2
Query: 18 VKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANYNIPENST---------- 67
V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+YNI + ST
Sbjct: 332 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLXGG 511
Query: 68 --IDTRSIAKRSRPLF----NTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLTNY 120
I +++ ++ L +TI +VK KI DKEGIP QQ L F GK + TL +Y
Sbjct: 512 MQIFVKTLTGKTITLXXESSDTIDNVKAKIXDKEGIPPDQQXLIFAGKQLXXXXTLADY 688
Score = 73.9 bits (180), Expect(2) = 7e-25
Identities = 40/68 (58%), Positives = 50/68 (72%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 55 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 231
Query: 61 NIPENSTI 68
NI + ST+
Sbjct: 232 NIQKESTL 255
Score = 58.2 bits (139), Expect = 1e-09
Identities = 33/60 (55%), Positives = 39/60 (65%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L +SSDTI +VK KI DKEGIP QQ L F GK + TLA+Y
Sbjct: 512 MQIFVKTLTG-KTITLXXESSDTIDNVKAKIXDKEGIPPDQQXLIFAGKQLXXXXTLADY 688
Score = 57.4 bits (137), Expect = 2e-09
Identities = 30/54 (55%), Positives = 37/54 (67%)
Frame = +1
Query: 82 NTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
+TI +VK KI DKEGIP QQRL F GK ++D +TL +YNI + L LV LR
Sbjct: 115 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 276
Score = 55.5 bits (132), Expect(2) = 7e-25
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +2
Query: 82 NTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLTNYNIPRTQPLTLVRSL 134
+TI +VK KI DKEGIP QQRL F GK ++D +TL +YNI + L LV L
Sbjct: 344 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 502
>TC76443 GP|15450587|gb|AAK96565.1 AT4g05050/T32N4_13 {Arabidopsis
thaliana}, partial (66%)
Length = 668
Score = 105 bits (261), Expect = 8e-24
Identities = 64/136 (47%), Positives = 81/136 (59%), Gaps = 16/136 (11%)
Frame = +2
Query: 16 LIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANYNIPENSTIDTRSIAK 75
L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+YNI + ST+ +
Sbjct: 62 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 241
Query: 76 RSRPLF----------------NTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLTN 119
+F +TI +VK KI DKEGIP QQRL F GK ++D +TL +
Sbjct: 242 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 421
Query: 120 YNIPRTQPLTLVRSLR 135
YNI + L LV LR
Sbjct: 422 YNIQKESTLHLVLRLR 469
Score = 73.9 bits (180), Expect = 2e-14
Identities = 40/68 (58%), Positives = 50/68 (72%)
Frame = +2
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 248 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 424
Query: 61 NIPENSTI 68
NI + ST+
Sbjct: 425 NIQKESTL 448
>TC86564 PIR|C86439|C86439 protein T19E23.13 [imported] - Arabidopsis
thaliana, partial (97%)
Length = 839
Score = 102 bits (253), Expect = 6e-23
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 16/151 (10%)
Frame = +1
Query: 1 MQIFIKIMYGNKMFPLIVKSSDTILDVKKKIHDKEGIPVHQQRLFFDGKPIKDRQTLANY 60
MQIF+K + G K L V+SSDTI +VK KI DKEGIP QQRL F GK ++D +TLA+Y
Sbjct: 115 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 291
Query: 61 NIPENST------------IDTRSIAKRSRPL----FNTILDVKKKIHDKEGIPVHQQRL 104
NI + ST I +++ + + +TI +K+++ +KEGIP QQRL
Sbjct: 292 NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 471
Query: 105 FFDGKPIKDRQTLTNYNIPRTQPLTLVRSLR 135
+ GK + D +T YNI L LV +LR
Sbjct: 472 IYAGKQLADDKTAKEYNIEGGSVLHLVLALR 564
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.141 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,682,424
Number of Sequences: 36976
Number of extensions: 45157
Number of successful extensions: 449
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of query: 138
length of database: 9,014,727
effective HSP length: 86
effective length of query: 52
effective length of database: 5,834,791
effective search space: 303409132
effective search space used: 303409132
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)
Medicago: description of AC148342.16